Query 039913
Match_columns 128
No_of_seqs 199 out of 1118
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:38:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 1.3E-26 4.6E-31 153.4 12.6 85 5-90 1-99 (100)
2 4fei_A Heat shock protein-rela 99.9 2E-26 6.7E-31 153.6 12.3 87 4-91 2-97 (102)
3 1gme_A Heat shock protein 16.9 99.9 3E-26 1E-30 162.5 9.8 98 5-103 40-151 (151)
4 4eld_A MJ16.5-P1, small heat s 99.9 3E-25 1E-29 158.6 11.9 91 8-102 56-161 (161)
5 3l1e_A Alpha-crystallin A chai 99.9 1.9E-24 6.3E-29 145.1 11.7 93 9-102 3-105 (106)
6 3aab_A Putative uncharacterize 99.9 1.1E-23 3.9E-28 144.3 10.5 85 6-91 22-118 (123)
7 2wj5_A Heat shock protein beta 99.9 1.2E-23 4E-28 140.1 8.6 88 10-101 3-98 (101)
8 3q9p_A Heat shock protein beta 99.9 7.7E-23 2.6E-27 132.2 10.7 75 13-88 2-84 (85)
9 2klr_A Alpha-crystallin B chai 99.9 6.8E-22 2.3E-26 143.3 9.1 92 10-104 65-164 (175)
10 2y1y_A Alpha-crystallin B chai 99.9 3.6E-21 1.2E-25 125.4 9.5 77 14-91 2-86 (90)
11 2bol_A TSP36, small heat shock 99.8 4.5E-21 1.5E-25 149.9 10.6 92 6-102 96-198 (314)
12 2bol_A TSP36, small heat shock 99.8 1.1E-18 3.7E-23 136.5 8.7 79 9-88 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.3 1.6E-11 5.3E-16 82.4 7.9 87 2-90 3-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.2 8.8E-11 3E-15 75.6 7.9 81 8-90 2-82 (92)
15 3eud_A Protein SHQ1; CS domain 98.7 3.3E-07 1.1E-11 61.5 11.8 81 4-91 13-98 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.7 3.4E-08 1.2E-12 68.3 7.0 79 6-91 1-84 (134)
17 3igf_A ALL4481 protein; two-do 98.7 5.5E-08 1.9E-12 77.4 7.7 72 9-89 298-370 (374)
18 1x5m_A Calcyclin-binding prote 98.3 2.1E-05 7.1E-10 53.4 11.3 81 8-90 20-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.2 1.4E-05 4.8E-10 55.1 10.0 83 7-90 18-112 (134)
20 1ejf_A Progesterone receptor P 98.1 1.9E-05 6.6E-10 53.5 8.5 79 9-90 4-82 (125)
21 2o30_A Nuclear movement protei 98.1 4.8E-05 1.6E-09 51.9 10.3 76 8-89 4-80 (131)
22 1wgv_A KIAA1068 protein; CS do 98.0 5.9E-05 2E-09 50.9 9.9 80 8-89 19-101 (124)
23 3qor_A Nuclear migration prote 98.0 4.7E-05 1.6E-09 51.3 9.1 80 6-90 14-97 (121)
24 1wfi_A Nuclear distribution ge 97.9 3.1E-05 1.1E-09 52.7 7.3 80 6-90 5-88 (131)
25 2rh0_A NUDC domain-containing 97.9 0.00017 5.9E-09 50.7 10.1 78 7-90 12-91 (157)
26 2kmw_A Uncharacterized protein 97.8 7.7E-05 2.7E-09 52.2 7.0 79 7-90 3-82 (150)
27 2cg9_X CO-chaperone protein SB 97.7 1.8E-05 6.3E-10 54.3 2.7 80 7-89 5-97 (134)
28 3q9p_A Heat shock protein beta 82.6 3.4 0.00012 25.2 5.3 36 54-90 6-41 (85)
29 4fei_A Heat shock protein-rela 79.9 7.2 0.00025 24.4 6.4 33 56-89 17-49 (102)
30 2cql_A OK/SW-CL.103, 60S ribos 79.8 4 0.00014 26.1 5.1 46 31-87 20-68 (100)
31 2y1y_A Alpha-crystallin B chai 79.0 4 0.00014 25.1 4.8 34 55-89 6-39 (90)
32 1vq8_E 50S ribosomal protein L 75.9 7.1 0.00024 27.6 5.8 47 31-88 9-55 (178)
33 3l1e_A Alpha-crystallin A chai 75.8 5.9 0.0002 25.2 5.0 34 55-89 12-45 (106)
34 4eld_A MJ16.5-P1, small heat s 74.9 17 0.00058 24.6 9.1 33 57-90 68-100 (161)
35 3gla_A Low molecular weight he 74.8 4.9 0.00017 24.9 4.4 29 19-48 65-94 (100)
36 1rl6_A Protein (ribosomal prot 73.7 8.7 0.0003 27.1 5.8 46 31-88 11-56 (177)
37 2wj5_A Heat shock protein beta 71.7 16 0.00054 22.9 7.5 34 55-89 11-44 (101)
38 3j21_F 50S ribosomal protein L 71.6 8.3 0.00028 27.4 5.4 45 31-86 14-58 (184)
39 1nkw_E 50S ribosomal protein L 69.8 13 0.00044 27.1 6.1 47 30-88 38-84 (212)
40 3aab_A Putative uncharacterize 69.6 19 0.00067 23.1 7.1 33 57-90 36-69 (123)
41 3iz5_F 60S ribosomal protein L 65.3 18 0.00061 25.7 6.0 46 31-87 13-60 (190)
42 3v2d_H 50S ribosomal protein L 61.5 20 0.0007 25.2 5.7 44 31-86 12-55 (180)
43 3u5e_H L8, RP24, YL11, 60S rib 59.5 30 0.001 24.6 6.4 46 31-87 13-59 (191)
44 2nwt_A UPF0165 protein AF_2212 57.6 8.2 0.00028 23.2 2.6 32 70-103 3-34 (69)
45 2klr_A Alpha-crystallin B chai 56.0 18 0.00061 25.2 4.6 35 54-89 72-106 (175)
46 1gme_A Heat shock protein 16.9 54.5 14 0.00049 24.9 3.8 31 18-49 104-135 (151)
47 4a17_E RPL9, 60S ribosomal pro 52.8 19 0.00065 25.5 4.4 47 30-86 12-58 (188)
48 2zkr_e 60S ribosomal protein L 51.1 27 0.00093 24.8 5.0 54 24-88 6-62 (192)
49 2o30_A Nuclear movement protei 44.8 34 0.0012 22.3 4.4 28 59-86 18-45 (131)
50 3bbo_I Ribosomal protein L6; l 44.8 9.2 0.00032 28.0 1.6 47 31-88 54-100 (223)
51 3r8s_G 50S ribosomal protein L 44.1 14 0.00047 26.0 2.4 43 31-85 11-53 (176)
52 1ew4_A CYAY protein; friedreic 38.0 20 0.00069 23.0 2.3 16 71-86 29-44 (106)
53 1n91_A ORF, hypothetical prote 36.7 60 0.002 20.9 4.5 35 13-49 8-43 (108)
54 2rh0_A NUDC domain-containing 30.6 66 0.0023 21.7 4.1 27 59-85 27-53 (157)
55 3oeq_A Frataxin homolog, mitoc 30.2 41 0.0014 22.3 2.9 15 72-86 49-63 (123)
56 2ks0_A Uncharacterized protein 26.2 40 0.0014 20.1 2.0 21 28-49 17-37 (71)
57 3t3l_A Frataxin, mitochondrial 24.8 51 0.0017 21.9 2.6 17 70-86 40-56 (129)
58 3d33_A Domain of unknown funct 24.0 76 0.0026 20.3 3.3 33 58-102 22-56 (108)
59 3sz6_A Conserved domain protei 24.0 1.5E+02 0.0052 19.1 5.0 76 6-88 33-109 (121)
60 1lpj_A Retinol-binding protein 23.3 1.6E+02 0.0054 19.1 6.7 49 33-84 39-96 (133)
61 3qqz_A Putative uncharacterize 22.5 2.2E+02 0.0076 20.5 7.7 58 25-84 21-86 (255)
62 1wgv_A KIAA1068 protein; CS do 21.1 1.7E+02 0.0057 18.6 6.8 27 60-86 34-61 (124)
63 1nvp_C Transcription initiatio 20.2 44 0.0015 20.3 1.4 15 69-83 46-60 (76)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.94 E-value=1.3e-26 Score=153.44 Aligned_cols=85 Identities=29% Similarity=0.517 Sum_probs=79.1
Q ss_pred CCCCceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEe--------------eeceeeeEEEEEECCCCcccC
Q 039913 5 TLALARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGR--------------GRRTSGTFWMQFRMPMSADLE 70 (128)
Q Consensus 5 ~~~~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~--------------~e~~~~~f~r~~~LP~~vd~~ 70 (128)
+.|.|++||+++++.|+|.++||||++++|+|.+.+ +.|+|+|+ +|+.+|.|.|+|.||..+|.+
T Consensus 1 ~~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~ 79 (100)
T 3gla_A 1 AQWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADAD 79 (100)
T ss_dssp CCSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTT
T ss_pred CCccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChH
Confidence 468999999999999999999999999999999999 89999998 367789999999999999999
Q ss_pred CeEEEEeCCEEEEEEecccc
Q 039913 71 HVKALLENGVLRITVPKLAE 90 (128)
Q Consensus 71 ~i~A~~~~G~L~I~~pK~~~ 90 (128)
.|+|+|+||+|+|++||...
T Consensus 80 ~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 80 GITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp SCEEEEETTEEEEEEEBC--
T ss_pred HeEEEEeCCEEEEEEecCCC
Confidence 99999999999999999864
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.94 E-value=2e-26 Score=153.58 Aligned_cols=87 Identities=26% Similarity=0.388 Sum_probs=82.3
Q ss_pred CCCCCceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEe---------eeceeeeEEEEEECCCCcccCCeEE
Q 039913 4 QTLALARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGR---------GRRTSGTFWMQFRMPMSADLEHVKA 74 (128)
Q Consensus 4 ~~~~~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~---------~e~~~~~f~r~~~LP~~vd~~~i~A 74 (128)
.+.|.|++||+++++.|+|.++||||++++|+|++.+ +.|+|+|+ +|+.+|.|.|+|.||..+|.+.++|
T Consensus 2 ~g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A 80 (102)
T 4fei_A 2 GGPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVA 80 (102)
T ss_dssp CEECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEE
T ss_pred CCcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEE
Confidence 4678999999999999999999999999999999999 89999998 5778999999999999999999999
Q ss_pred EEeCCEEEEEEeccccc
Q 039913 75 LLENGVLRITVPKLAEE 91 (128)
Q Consensus 75 ~~~~G~L~I~~pK~~~~ 91 (128)
+|+||+|+|++||....
T Consensus 81 ~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 81 SLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp EEETTEEEEEEEBSSCC
T ss_pred EEECCEEEEEEEccCcc
Confidence 99999999999998765
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.93 E-value=3e-26 Score=162.54 Aligned_cols=98 Identities=52% Similarity=0.744 Sum_probs=87.2
Q ss_pred CCCCceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEe--------------eeceeeeEEEEEECCCCcccC
Q 039913 5 TLALARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGR--------------GRRTSGTFWMQFRMPMSADLE 70 (128)
Q Consensus 5 ~~~~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~--------------~e~~~~~f~r~~~LP~~vd~~ 70 (128)
..+.|++||++++++|+|.++|||+++++|+|.+.+++.|+|+|+ +|+.+|.|.|+|.||..||.+
T Consensus 40 ~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 119 (151)
T 1gme_A 40 AFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE 119 (151)
T ss_dssp HHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred cccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcccc
Confidence 457899999999999999999999999999999953379999997 356689999999999999999
Q ss_pred CeEEEEeCCEEEEEEeccccccCCCCeEEEecc
Q 039913 71 HVKALLENGVLRITVPKLAEEKKSRPKVISISG 103 (128)
Q Consensus 71 ~i~A~~~~G~L~I~~pK~~~~~~~~~~~I~I~~ 103 (128)
.|+|+|+||+|+|++||.... ....++|+|+|
T Consensus 120 ~i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~~ 151 (151)
T 1gme_A 120 EVKAGLENGVLTVTVPKAEVK-KPEVKAIQISG 151 (151)
T ss_dssp GCEEEEETTEEEEEEECCCCC-TTCCCCCCCCC
T ss_pred ceEEEEECCEEEEEEEccCcC-CCCCeEeeeCC
Confidence 999999999999999998865 34568888874
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=3e-25 Score=158.64 Aligned_cols=91 Identities=19% Similarity=0.306 Sum_probs=83.2
Q ss_pred CceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEe--------------eec-eeeeEEEEEECCCCcccCCe
Q 039913 8 LARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGR--------------GRR-TSGTFWMQFRMPMSADLEHV 72 (128)
Q Consensus 8 ~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~--------------~e~-~~~~f~r~~~LP~~vd~~~i 72 (128)
.+++||++++++|+|.++||||+++||+|.+.+ +.|+|+|+ +|+ .+|.|.|+|.||..||.+.|
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i 134 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENA 134 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccE
Confidence 344999999999999999999999999999999 89999998 344 78999999999999999999
Q ss_pred EEEEeCCEEEEEEeccccccCCCCeEEEec
Q 039913 73 KALLENGVLRITVPKLAEEKKSRPKVISIS 102 (128)
Q Consensus 73 ~A~~~~G~L~I~~pK~~~~~~~~~~~I~I~ 102 (128)
+|+|+||+|+|++||.... ++|+|+|+
T Consensus 135 ~A~~~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 135 SAKFENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp EEEEETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred EEEEECCEEEEEEEcCCCC---CCcEeecC
Confidence 9999999999999998765 47888885
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=1.9e-24 Score=145.12 Aligned_cols=93 Identities=23% Similarity=0.449 Sum_probs=82.6
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeee-------ceeeeEEEEEECCCCcccCCeEEEE-eCCE
Q 039913 9 ARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGR-------RTSGTFWMQFRMPMSADLEHVKALL-ENGV 80 (128)
Q Consensus 9 p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e-------~~~~~f~r~~~LP~~vd~~~i~A~~-~~G~ 80 (128)
...+|+++++.|.|.++||||+++||+|.+.+ +.|+|+|+++ ...+.|.|+|.||.+||.+.|+|+| +||+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv 81 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM 81 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence 45899999999999999999999999999999 8999999832 2346799999999999999999999 8999
Q ss_pred EEEEEecccccc--CCCCeEEEec
Q 039913 81 LRITVPKLAEEK--KSRPKVISIS 102 (128)
Q Consensus 81 L~I~~pK~~~~~--~~~~~~I~I~ 102 (128)
|+|++||..... ...+|+|+|+
T Consensus 82 L~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 82 LTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEEEEccCcccccCCCCeEeeec
Confidence 999999988752 2478999986
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.90 E-value=1.1e-23 Score=144.33 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=77.7
Q ss_pred CCCceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEe-----------eeceeeeEEEEEECCCCcccCCe-E
Q 039913 6 LALARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGR-----------GRRTSGTFWMQFRMPMSADLEHV-K 73 (128)
Q Consensus 6 ~~~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~-----------~e~~~~~f~r~~~LP~~vd~~~i-~ 73 (128)
.+.|++||++++++|+|.++|||+++++|+|++.+++.|+|+|+ +|+.+ .|.|+|.||.++|.++| +
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~ 100 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKDAEIS 100 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTTCCCE
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcchhCe
Confidence 46799999999999999999999999999999998459999999 24455 89999999999999999 9
Q ss_pred EEEeCCEEEEEEeccccc
Q 039913 74 ALLENGVLRITVPKLAEE 91 (128)
Q Consensus 74 A~~~~G~L~I~~pK~~~~ 91 (128)
|+|+||+|+|++||....
T Consensus 101 A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 101 GKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEETTEEEEEEEGGGEE
T ss_pred eEEcCCEEEEEEEcCCCC
Confidence 999999999999998754
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.90 E-value=1.2e-23 Score=140.05 Aligned_cols=88 Identities=18% Similarity=0.272 Sum_probs=76.3
Q ss_pred eeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeec-------eeeeEEEEEECCCCcccCCeEEEE-eCCEE
Q 039913 10 RADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRR-------TSGTFWMQFRMPMSADLEHVKALL-ENGVL 81 (128)
Q Consensus 10 ~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~-------~~~~f~r~~~LP~~vd~~~i~A~~-~~G~L 81 (128)
.+||+++++.|.|.++||||+++||+|++.+ +.|+|+|+++. ....|.|+|.||.+||.+.++|+| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence 5799999999999999999999999999999 89999999432 235699999999999999999999 89999
Q ss_pred EEEEeccccccCCCCeEEEe
Q 039913 82 RITVPKLAEEKKSRPKVISI 101 (128)
Q Consensus 82 ~I~~pK~~~~~~~~~~~I~I 101 (128)
+|++||.... +++.++|
T Consensus 82 ~I~lPK~~~~---~~~~~~i 98 (101)
T 2wj5_A 82 SIQATPASAQ---ASLPSPP 98 (101)
T ss_dssp EEEECBCCCC---CSSCC--
T ss_pred EEEEECCCcC---CCCCCcc
Confidence 9999998765 3555444
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=7.7e-23 Score=132.17 Aligned_cols=75 Identities=19% Similarity=0.387 Sum_probs=68.5
Q ss_pred EEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeee-------ceeeeEEEEEECCCCcccCCeEEEEe-CCEEEEE
Q 039913 13 WKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGR-------RTSGTFWMQFRMPMSADLEHVKALLE-NGVLRIT 84 (128)
Q Consensus 13 i~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e-------~~~~~f~r~~~LP~~vd~~~i~A~~~-~G~L~I~ 84 (128)
+.++++.|.|.++||||++++|+|.+.+ +.|+|+|+++ ..++.|.|+|.||.+||.+.|+|+|. ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 4578999999999999999999999999 8999999932 24689999999999999999999998 9999999
Q ss_pred Eecc
Q 039913 85 VPKL 88 (128)
Q Consensus 85 ~pK~ 88 (128)
+||.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9986
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.86 E-value=6.8e-22 Score=143.27 Aligned_cols=92 Identities=21% Similarity=0.400 Sum_probs=68.3
Q ss_pred eeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeec-------eeeeEEEEEECCCCcccCCeEEEE-eCCEE
Q 039913 10 RADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRR-------TSGTFWMQFRMPMSADLEHVKALL-ENGVL 81 (128)
Q Consensus 10 ~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~-------~~~~f~r~~~LP~~vd~~~i~A~~-~~G~L 81 (128)
.+||+++++.|.|.++||||++++|+|++.+ +.|+|+|+++. ..+.|.|+|.||.+||.++|+|+| +||+|
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL 143 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVL 143 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEE
Confidence 3799999999999999999999999999999 89999998322 234699999999999999999999 79999
Q ss_pred EEEEeccccccCCCCeEEEecce
Q 039913 82 RITVPKLAEEKKSRPKVISISGF 104 (128)
Q Consensus 82 ~I~~pK~~~~~~~~~~~I~I~~~ 104 (128)
+|++||.... ...|+|+|+..
T Consensus 144 ~I~lPK~~~~--~~~r~I~I~~~ 164 (175)
T 2klr_A 144 TVNGPRKQVS--GPERTIPITRE 164 (175)
T ss_dssp EEEEECC----------------
T ss_pred EEEEECCCCC--CCCeEEEEecC
Confidence 9999998754 24699999854
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.85 E-value=3.6e-21 Score=125.40 Aligned_cols=77 Identities=21% Similarity=0.431 Sum_probs=64.4
Q ss_pred EEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeec-------eeeeEEEEEECCCCcccCCeEEEE-eCCEEEEEE
Q 039913 14 KETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRR-------TSGTFWMQFRMPMSADLEHVKALL-ENGVLRITV 85 (128)
Q Consensus 14 ~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~-------~~~~f~r~~~LP~~vd~~~i~A~~-~~G~L~I~~ 85 (128)
.++++.|+|.++||||++++|+|.+.+ +.|+|+|+++. ..+.|.|+|.||.+||.+.|+|+| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 367899999999999999999999999 89999998322 235699999999999999999999 899999999
Q ss_pred eccccc
Q 039913 86 PKLAEE 91 (128)
Q Consensus 86 pK~~~~ 91 (128)
||....
T Consensus 81 pK~~~~ 86 (90)
T 2y1y_A 81 PRKQVS 86 (90)
T ss_dssp CBC---
T ss_pred EcCCCC
Confidence 998765
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=4.5e-21 Score=149.94 Aligned_cols=92 Identities=21% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCCceeeEEEcCC----EEEEEEEcCCCCCCCeEEEEEcCcEEEEEEee------eceeeeEEEEEECCCCcccCCeEEE
Q 039913 6 LALARADWKETRT----AHVITLDIPRMKENDVKIEVEENRVLRVSGRG------RRTSGTFWMQFRMPMSADLEHVKAL 75 (128)
Q Consensus 6 ~~~p~~di~e~~~----~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~------e~~~~~f~r~~~LP~~vd~~~i~A~ 75 (128)
.+.|++||+++++ +|.|.++||||++++|+|.+.+ +.|+|+|++ .+.+|.|.|+|.||.+||.+.|+|+
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~ 174 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQAT 174 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEE
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEE
Confidence 3679999999999 9999999999999999999999 899999993 3577999999999999999999999
Q ss_pred Ee-CCEEEEEEeccccccCCCCeEEEec
Q 039913 76 LE-NGVLRITVPKLAEEKKSRPKVISIS 102 (128)
Q Consensus 76 ~~-~G~L~I~~pK~~~~~~~~~~~I~I~ 102 (128)
|+ ||+|+|++||..+. .+.|.|+
T Consensus 175 ~~~nGVL~I~lPK~~~~----~~~I~it 198 (314)
T 2bol_A 175 ITTDDVLVIEAPVNEPN----YKAIKLS 198 (314)
T ss_dssp ECSSSEEEEEEEBSSCC----TTTEEEE
T ss_pred EeCCCEEEEEEeccCcc----cceeecc
Confidence 99 99999999998765 3335554
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.76 E-value=1.1e-18 Score=136.47 Aligned_cols=79 Identities=18% Similarity=0.325 Sum_probs=68.6
Q ss_pred ceeeEEEcC---CEEEEEEEc-CCCCCCCeEEEEEcCcEEEEEEe----------eeceeeeEEEEEECCCCcccCCeEE
Q 039913 9 ARADWKETR---TAHVITLDI-PRMKENDVKIEVEENRVLRVSGR----------GRRTSGTFWMQFRMPMSADLEHVKA 74 (128)
Q Consensus 9 p~~di~e~~---~~~~l~~~l-PG~~~edi~V~v~~~~~L~I~g~----------~e~~~~~f~r~~~LP~~vd~~~i~A 74 (128)
..++|.+++ +.|.|.++| |||++++|+|++.+ +.|+|+|+ +|+.+|.|.|+|.||.+||.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC------------CEEEEEEEECSSEECGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEE
Confidence 346666654 579999999 99999999999999 89999999 4788999999999999999999999
Q ss_pred EEeCCEEEEEEecc
Q 039913 75 LLENGVLRITVPKL 88 (128)
Q Consensus 75 ~~~~G~L~I~~pK~ 88 (128)
+|+||+|+|++||.
T Consensus 300 ~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 300 EIVDGLMVVEAPLF 313 (314)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEeCCEEEEEEecC
Confidence 99999999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.27 E-value=1.6e-11 Score=82.36 Aligned_cols=87 Identities=21% Similarity=0.266 Sum_probs=73.5
Q ss_pred CCCCCCCceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEE
Q 039913 2 HHQTLALARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVL 81 (128)
Q Consensus 2 ~~~~~~~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L 81 (128)
++.....|+++|+++.+.+.|.+.+||+.++++.|.+.+ +.|.|++... ....|...+.|+..|+++..++++.+|.|
T Consensus 3 ~m~~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~-~~~~y~~~~~L~~~I~~e~s~~~~~~~~l 80 (114)
T 1rl1_A 3 HMTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLP-SGEDYNLKLELLHPIIPEQSTFKVLSTKI 80 (114)
T ss_dssp -----CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECT-TSSEEEEEECBSSCCCGGGEEEEECSSSE
T ss_pred CCCCCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeC-CCcEEEEEeeCCCcCCccccEEEEECCEE
Confidence 344456788999999999999999999999999999999 7899987521 23579999999999999999999999999
Q ss_pred EEEEecccc
Q 039913 82 RITVPKLAE 90 (128)
Q Consensus 82 ~I~~pK~~~ 90 (128)
.|+|+|...
T Consensus 81 ~i~L~K~~~ 89 (114)
T 1rl1_A 81 EIKLKKPEA 89 (114)
T ss_dssp EEEEECSSC
T ss_pred EEEEEcCCC
Confidence 999999764
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.18 E-value=8.8e-11 Score=75.55 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=72.6
Q ss_pred CceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEec
Q 039913 8 LARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVPK 87 (128)
Q Consensus 8 ~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK 87 (128)
.++++|+++.+.+.|.+.+||+.++++.|.+.+ +.|.|++.. .....|...+.|+..|+++..++++.+|.|.|+|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~-~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K 79 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEV-PGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAK 79 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECC-TTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEB
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEc-CCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEc
Confidence 578999999999999999999999999999999 789999762 123569999999999999999999999999999999
Q ss_pred ccc
Q 039913 88 LAE 90 (128)
Q Consensus 88 ~~~ 90 (128)
...
T Consensus 80 ~~~ 82 (92)
T 2xcm_C 80 ADI 82 (92)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.72 E-value=3.3e-07 Score=61.54 Aligned_cols=81 Identities=15% Similarity=0.323 Sum_probs=71.7
Q ss_pred CCCCCceeeEEEcCCEEEEEEEcCCCC--CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCc-ccCCeEEEEe--C
Q 039913 4 QTLALARADWKETRTAHVITLDIPRMK--ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSA-DLEHVKALLE--N 78 (128)
Q Consensus 4 ~~~~~p~~di~e~~~~~~l~~~lPG~~--~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~v-d~~~i~A~~~--~ 78 (128)
.-+..|.+.|.++++.++|.+.+|.++ ..++++.+++ ..+... ...|.-++.||..| +-+.-+|+|+ +
T Consensus 13 ~~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~------~~PYyLRL~lP~~vved~~~~A~YD~d~ 85 (115)
T 3eud_A 13 DKMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH------LSPYYLRLRFPHELIDDERSTAQYDSKD 85 (115)
T ss_dssp -CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEE------ETTEEEEEECSSCEECSTTCEEEEETTT
T ss_pred CCEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEe------cCCeEEEEecCcceecCCCcceEEeCCC
Confidence 457789999999999999999999876 8899999999 788888 67899999999999 7788899996 8
Q ss_pred CEEEEEEeccccc
Q 039913 79 GVLRITVPKLAEE 91 (128)
Q Consensus 79 G~L~I~~pK~~~~ 91 (128)
|.++|++||...-
T Consensus 86 g~~~v~lpK~~~G 98 (115)
T 3eud_A 86 ECINVKVAKLNKN 98 (115)
T ss_dssp TEEEEEEEESSTT
T ss_pred cEEEEEEcCCcCC
Confidence 9999999998754
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.72 E-value=3.4e-08 Score=68.28 Aligned_cols=79 Identities=15% Similarity=0.296 Sum_probs=71.5
Q ss_pred CCCceeeEEEcCCEEEEEEEcCCCC--CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCc-ccCCeEEEEe--CCE
Q 039913 6 LALARADWKETRTAHVITLDIPRMK--ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSA-DLEHVKALLE--NGV 80 (128)
Q Consensus 6 ~~~p~~di~e~~~~~~l~~~lPG~~--~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~v-d~~~i~A~~~--~G~ 80 (128)
+..|.+.+.++++.++|.+.+|..+ ..++++.+.+ ..+.+. ...|.-++.||..| +.+..+|+|+ .|.
T Consensus 1 MiTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~------~~PYyLRL~LP~~V~e~~~~kA~YD~d~~~ 73 (134)
T 2k8q_A 1 GITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH------LSPYYLRLRFPHELIDDERSTAQYDSKDEC 73 (134)
T ss_dssp CCCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEEC------SSSSCEEECCSSCEECCSSCEEEEETTTTE
T ss_pred CcCceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEe------cCCeEEEecCCCeeecCCCcceeEeccCCE
Confidence 3568999999999999999999998 8999999999 788887 67788899999999 8899999996 799
Q ss_pred EEEEEeccccc
Q 039913 81 LRITVPKLAEE 91 (128)
Q Consensus 81 L~I~~pK~~~~ 91 (128)
|+|+|||....
T Consensus 74 ~~VtLpK~~~G 84 (134)
T 2k8q_A 74 INVKVAKLNKN 84 (134)
T ss_dssp EEEEEEESSTT
T ss_pred EEEEEeCCCCC
Confidence 99999998765
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.66 E-value=5.5e-08 Score=77.39 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=61.1
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCc-ccCCeEEEEeCCEEEEEEec
Q 039913 9 ARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSA-DLEHVKALLENGVLRITVPK 87 (128)
Q Consensus 9 p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~v-d~~~i~A~~~~G~L~I~~pK 87 (128)
+++.|... .|.+++.|||+++++|++...+ +.|+|+ .|.|+|.|.||..+ ...-..|+|+||.|+|++-.
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~------~g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~~~~ 368 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVE------AGDQRRNIFLPPALSGRPITGAKFQNNYLIISFLE 368 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEE------ETTEEEEEECCTTTTTCCEEEEEEETTEEEEEECC
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEE------ECCEeecccCCHHHcCCCccccEEECCEEEEEEeh
Confidence 44555333 7999999999999999999999 799999 89999999999988 44566799999999999965
Q ss_pred cc
Q 039913 88 LA 89 (128)
Q Consensus 88 ~~ 89 (128)
..
T Consensus 369 ~~ 370 (374)
T 3igf_A 369 HH 370 (374)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=2.1e-05 Score=53.41 Aligned_cols=81 Identities=12% Similarity=0.227 Sum_probs=69.4
Q ss_pred CceeeEEEcCCEEEEEEEcCCC---CCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEE-CCCCcccCCeEEEEeCCEEEE
Q 039913 8 LARADWKETRTAHVITLDIPRM---KENDVKIEVEENRVLRVSGRGRRTSGTFWMQFR-MPMSADLEHVKALLENGVLRI 83 (128)
Q Consensus 8 ~p~~di~e~~~~~~l~~~lPG~---~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~-LP~~vd~~~i~A~~~~G~L~I 83 (128)
.+.++|+++.+...|.+.+||+ .++++.|.+.. +.|.|..... ....|.-.+. |-..|+++.-+.++..+.+.|
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~-~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei 97 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNL-NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLI 97 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSC-SSSCEEEEEECBSSCCCTTTCEEEEETTEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcC-CCCcEEEEhHHhcCccCcccCEEEEeCCEEEE
Confidence 5689999999999999999999 89999999999 7899986411 1236777885 999999999899999999999
Q ss_pred EEecccc
Q 039913 84 TVPKLAE 90 (128)
Q Consensus 84 ~~pK~~~ 90 (128)
+|-|...
T Consensus 98 ~L~K~~~ 104 (127)
T 1x5m_A 98 LCRKKVE 104 (127)
T ss_dssp EEECSSS
T ss_pred EEEECCC
Confidence 9999764
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.23 E-value=1.4e-05 Score=55.07 Aligned_cols=83 Identities=16% Similarity=0.198 Sum_probs=70.6
Q ss_pred CCceeeEEEc-CCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeece--------ee---eEEEEEECCCCcccCCeEE
Q 039913 7 ALARADWKET-RTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRRT--------SG---TFWMQFRMPMSADLEHVKA 74 (128)
Q Consensus 7 ~~p~~di~e~-~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~~--------~~---~f~r~~~LP~~vd~~~i~A 74 (128)
..++++|+++ .+...|.+.++++.++++.|.+.. +.|.|....... .| .|.-.+.|-..|+++.-+.
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~ 96 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTF 96 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEE
Confidence 4678999999 999999999999999999999999 789998652111 11 6888889999999999888
Q ss_pred EEeCCEEEEEEecccc
Q 039913 75 LLENGVLRITVPKLAE 90 (128)
Q Consensus 75 ~~~~G~L~I~~pK~~~ 90 (128)
++....+.|+|.|...
T Consensus 97 ~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 97 CFTASRIDICLRKRQS 112 (134)
T ss_dssp EECSSEEEEEEEESSS
T ss_pred EEeCCEEEEEEEECCC
Confidence 8889999999999763
No 20
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=98.10 E-value=1.9e-05 Score=53.46 Aligned_cols=79 Identities=18% Similarity=0.170 Sum_probs=67.2
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEecc
Q 039913 9 ARADWKETRTAHVITLDIPRMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVPKL 88 (128)
Q Consensus 9 p~~di~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~ 88 (128)
|.++|+++.+.+.|++.+|+. +++.|.+.. +.|.+++........|.-.+.|-..|+++..+.++.+..+.|+|.|.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~ 80 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKG 80 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEES
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEEC
Confidence 389999999999999999996 689999998 79999876322234588889999999999988888888999999997
Q ss_pred cc
Q 039913 89 AE 90 (128)
Q Consensus 89 ~~ 90 (128)
..
T Consensus 81 ~~ 82 (125)
T 1ejf_A 81 ES 82 (125)
T ss_dssp ST
T ss_pred CC
Confidence 63
No 21
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=98.08 E-value=4.8e-05 Score=51.89 Aligned_cols=76 Identities=14% Similarity=0.248 Sum_probs=63.1
Q ss_pred CceeeEEEcCCEEEEEEEcC-CCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEe
Q 039913 8 LARADWKETRTAHVITLDIP-RMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVP 86 (128)
Q Consensus 8 ~p~~di~e~~~~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~p 86 (128)
.|.+.|.++.+...|.+.|| |++.+++.|.+.. +.|.|.... .. .-...|...|+++.-..++.++.|.|+|-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~g----~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~ 77 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQG----EI-VIDGELLHEVDVSSLWWVINGDVVDVNVT 77 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEETT----EE-EEEEEBSSCEEEEEEEEEEETTEEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEECC----Ee-eEccccccccccccCEEEEeCCEEEEEEE
Confidence 57899999999999999997 8999999999999 799998641 12 34567899999999888999999999999
Q ss_pred ccc
Q 039913 87 KLA 89 (128)
Q Consensus 87 K~~ 89 (128)
|..
T Consensus 78 K~~ 80 (131)
T 2o30_A 78 KKR 80 (131)
T ss_dssp ESS
T ss_pred ECC
Confidence 973
No 22
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.04 E-value=5.9e-05 Score=50.93 Aligned_cols=80 Identities=16% Similarity=0.270 Sum_probs=66.6
Q ss_pred CceeeEEEcCCEEEEEEEcC-CC-CCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCE-EEEE
Q 039913 8 LARADWKETRTAHVITLDIP-RM-KENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGV-LRIT 84 (128)
Q Consensus 8 ~p~~di~e~~~~~~l~~~lP-G~-~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~-L~I~ 84 (128)
.|.+.|.++.+...|++.|| |+ +.+++.|.+.. +.|.|...... ...+.-...|...|+++.-..++.++. |.|+
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~-~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~ 96 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN-GERVLMEGKLTHKINTESSLWSLEPGKCVLVN 96 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS-SEEEEEEEEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC-CCceEEcccccCcCCCcCCEEEEeCCCEEEEE
Confidence 57899999999999999999 88 89999999999 79999864211 122445678999999999999998875 9999
Q ss_pred Eeccc
Q 039913 85 VPKLA 89 (128)
Q Consensus 85 ~pK~~ 89 (128)
|-|..
T Consensus 97 L~K~~ 101 (124)
T 1wgv_A 97 LSKVG 101 (124)
T ss_dssp ECBSS
T ss_pred EEECC
Confidence 99975
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=98.01 E-value=4.7e-05 Score=51.32 Aligned_cols=80 Identities=19% Similarity=0.346 Sum_probs=66.7
Q ss_pred CCCceeeEEEcCCEEEEEEEcC-C--CCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCC-EE
Q 039913 6 LALARADWKETRTAHVITLDIP-R--MKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENG-VL 81 (128)
Q Consensus 6 ~~~p~~di~e~~~~~~l~~~lP-G--~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G-~L 81 (128)
...|.+.|.++.+.+.|++.|| | ++..++.|.+.. +.|.|.... ..+.-...|...|+++.-...+++| .|
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg----~~~~~~g~L~~~I~~deS~w~i~~~~~i 88 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKG----QPAIIDGELYNEVKVEESSWLIADGAVV 88 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETT----SCCSEEEEBSSCBCGGGCEEEEETTTEE
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcC----cceEEeccccccccccccEEEEcCCCEE
Confidence 3467899999999999999999 5 789999999999 789887541 1233456789999999999999998 99
Q ss_pred EEEEecccc
Q 039913 82 RITVPKLAE 90 (128)
Q Consensus 82 ~I~~pK~~~ 90 (128)
.|+|-|...
T Consensus 89 ~i~L~K~~~ 97 (121)
T 3qor_A 89 TVHLEKINK 97 (121)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEECCC
Confidence 999998754
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.95 E-value=3.1e-05 Score=52.75 Aligned_cols=80 Identities=20% Similarity=0.336 Sum_probs=66.4
Q ss_pred CCCceeeEEEcCCEEEEEEEcC-C--CCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCC-EE
Q 039913 6 LALARADWKETRTAHVITLDIP-R--MKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENG-VL 81 (128)
Q Consensus 6 ~~~p~~di~e~~~~~~l~~~lP-G--~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G-~L 81 (128)
...|.+.|.++.+...|++.|| | ++++++.|.+.. +.|.|..... .+.-...|...|+++.-..++.++ .|
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~----~~~~~~~L~~~I~~e~s~w~i~~~k~v 79 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ----PPVVDGELYNEVKVEESSWLIEDGKVV 79 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS----CCSBCSCBSSCBCSTTCEEEEETTTEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc----eEEEecccccccccccCEEEEcCCCEE
Confidence 3457899999999999999999 6 899999999999 7999986411 122345688899999999999988 89
Q ss_pred EEEEecccc
Q 039913 82 RITVPKLAE 90 (128)
Q Consensus 82 ~I~~pK~~~ 90 (128)
.|+|-|...
T Consensus 80 ~i~L~K~~~ 88 (131)
T 1wfi_A 80 TVHLEKINK 88 (131)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEECCC
Confidence 999999864
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.86 E-value=0.00017 Score=50.72 Aligned_cols=78 Identities=18% Similarity=0.282 Sum_probs=66.4
Q ss_pred CCceeeEEEcCCEEEEEEEcC-CCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCE-EEEE
Q 039913 7 ALARADWKETRTAHVITLDIP-RMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGV-LRIT 84 (128)
Q Consensus 7 ~~p~~di~e~~~~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~-L~I~ 84 (128)
..|.+.|.++.+.+.|++.|| |++..+|.|.+.. +.|.|..... . .-...|...|+++.-..++.++. |.|+
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~kg~----~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~ 85 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVGGR----E-ILKGKLFDSTIADEGTWTLEDRKMVRIV 85 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEETTE----E-EEEEEBSSCBCGGGCEEEEECCCEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEECCE----E-EEeeccccccCccccEEEEcCCcEEEEE
Confidence 357899999999999999998 8999999999999 7999986521 2 34567999999999999999874 9999
Q ss_pred Eecccc
Q 039913 85 VPKLAE 90 (128)
Q Consensus 85 ~pK~~~ 90 (128)
|-|...
T Consensus 86 L~K~~~ 91 (157)
T 2rh0_A 86 LTKTKR 91 (157)
T ss_dssp EEBSSC
T ss_pred EEEcCC
Confidence 999864
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.77 E-value=7.7e-05 Score=52.19 Aligned_cols=79 Identities=11% Similarity=0.177 Sum_probs=66.0
Q ss_pred CCceeeEEEcCCEEEEEEEcCCCCCCCeEEEEE-cCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEE
Q 039913 7 ALARADWKETRTAHVITLDIPRMKENDVKIEVE-ENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITV 85 (128)
Q Consensus 7 ~~p~~di~e~~~~~~l~~~lPG~~~edi~V~v~-~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~ 85 (128)
..|.++|+++.+.+.|++.||++ +++.|.+. . +.|.+++. ......|.-.+.|-..|+++ .+.+.....+.|+|
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L 77 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSI 77 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEE
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cCCCceEEEEeEhhhccccc-ceEEecCCEEEEEE
Confidence 35899999999999999999997 47888888 6 78999976 22234688889999999999 88888888899999
Q ss_pred ecccc
Q 039913 86 PKLAE 90 (128)
Q Consensus 86 pK~~~ 90 (128)
.|...
T Consensus 78 ~K~e~ 82 (150)
T 2kmw_A 78 QKEER 82 (150)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 98764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.69 E-value=1.8e-05 Score=54.31 Aligned_cols=80 Identities=10% Similarity=0.198 Sum_probs=61.0
Q ss_pred CCceeeEEEcCCE-------EEEEEEcCCCCCCCeEEEEEcCcEEEEEEeeec-----eeeeEEEEEECCCCcccCCeEE
Q 039913 7 ALARADWKETRTA-------HVITLDIPRMKENDVKIEVEENRVLRVSGRGRR-----TSGTFWMQFRMPMSADLEHVKA 74 (128)
Q Consensus 7 ~~p~~di~e~~~~-------~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~e~-----~~~~f~r~~~LP~~vd~~~i~A 74 (128)
..|.+.|+++.+. +.|++.+|++. ++.|.+.. +.|.+++.... ....|.-.+.|...|+++..+.
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~ 81 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH 81 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence 4688999999877 99999999984 88888888 79999876321 1246888899999999999999
Q ss_pred EEeCCE-EEEEEeccc
Q 039913 75 LLENGV-LRITVPKLA 89 (128)
Q Consensus 75 ~~~~G~-L~I~~pK~~ 89 (128)
++.++. |.|+|.|..
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 999888 999999976
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=82.59 E-value=3.4 Score=25.21 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=29.5
Q ss_pred eeeEEEEEECCCCcccCCeEEEEeCCEEEEEEecccc
Q 039913 54 SGTFWMQFRMPMSADLEHVKALLENGVLRITVPKLAE 90 (128)
Q Consensus 54 ~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~~ 90 (128)
...|.-.+.|| +++.+.|+-.+.+|.|+|..-+...
T Consensus 6 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 6 ADRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAAR 41 (85)
T ss_dssp CCEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC--
T ss_pred CCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEccc
Confidence 34677789998 7899999999999999999876543
No 29
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=79.94 E-value=7.2 Score=24.42 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=27.0
Q ss_pred eEEEEEECCCCcccCCeEEEEeCCEEEEEEeccc
Q 039913 56 TFWMQFRMPMSADLEHVKALLENGVLRITVPKLA 89 (128)
Q Consensus 56 ~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~ 89 (128)
.|.-.+.|| +++.+.|+-.++++.|+|+--+..
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 49 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAEDGGQLTVSGERPG 49 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEEETTEEEEEEEECC
T ss_pred EEEEEEECC-CCchHhEEEEEECCEEEEEEEEec
Confidence 344458899 889999999999999999887643
No 30
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=79.83 E-value=4 Score=26.13 Aligned_cols=46 Identities=26% Similarity=0.333 Sum_probs=32.0
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCE---EEEEEec
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGV---LRITVPK 87 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~---L~I~~pK 87 (128)
|+.++|.+++ +.+.|+|. .|...+.|.- . .+...++++. |.|..+.
T Consensus 20 P~gV~V~i~~-~~VtVKGP----kG~L~~~~~h-~-----~v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGP----RGTLRRDFNH-I-----NVELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEET-TEEEEEET----TEEEEEECCS-S-----CCEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeC-CEEEEECC----CceEEEEecc-C-----cEEEEEcCCceeEEEEEccC
Confidence 5788999999 89999987 6777765532 2 2555667665 7666543
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=78.98 E-value=4 Score=25.12 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=29.3
Q ss_pred eeEEEEEECCCCcccCCeEEEEeCCEEEEEEeccc
Q 039913 55 GTFWMQFRMPMSADLEHVKALLENGVLRITVPKLA 89 (128)
Q Consensus 55 ~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~ 89 (128)
..|.-.+.|| +++.+.|+-.+.++.|+|..-+..
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 4577779999 889999999999999999987654
No 32
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=75.88 E-value=7.1 Score=27.62 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=34.6
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEecc
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVPKL 88 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~ 88 (128)
|+.++|++++ +.++|+|. .|...+.|. +.. +....+++.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGp----kG~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGD----NGSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEET----TEEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECC----CeEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4678899999 89999987 777777662 323 45567899988876543
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=75.84 E-value=5.9 Score=25.17 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=28.4
Q ss_pred eeEEEEEECCCCcccCCeEEEEeCCEEEEEEeccc
Q 039913 55 GTFWMQFRMPMSADLEHVKALLENGVLRITVPKLA 89 (128)
Q Consensus 55 ~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~ 89 (128)
..|.-.+.|| +++.+.|+-.+.++.|+|.--+..
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 45 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHNE 45 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4566668898 789999999999999999986543
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=74.85 E-value=17 Score=24.64 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=27.2
Q ss_pred EEEEEECCCCcccCCeEEEEeCCEEEEEEecccc
Q 039913 57 FWMQFRMPMSADLEHVKALLENGVLRITVPKLAE 90 (128)
Q Consensus 57 f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~~ 90 (128)
|.-.+.|| +++.+.|+-.+.++.|+|+--+...
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 33447898 6899999999999999999887663
No 35
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=74.81 E-value=4.9 Score=24.94 Aligned_cols=29 Identities=10% Similarity=0.186 Sum_probs=25.4
Q ss_pred EEEEEEEcC-CCCCCCeEEEEEcCcEEEEEE
Q 039913 19 AHVITLDIP-RMKENDVKIEVEENRVLRVSG 48 (128)
Q Consensus 19 ~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g 48 (128)
.|.-.+.|| +++.+.|+-.+.+ +.|.|+-
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~-GvL~I~~ 94 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRN-GVLEIRI 94 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEET-TEEEEEE
T ss_pred EEEEEEECCCCcChHHeEEEEeC-CEEEEEE
Confidence 577789999 5899999999998 8999983
No 36
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=73.73 E-value=8.7 Score=27.09 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=34.7
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEecc
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVPKL 88 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~ 88 (128)
|+.++|++++ +.++|+|. .|...+.| +.. +....+++.|.|..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGp----kG~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGP----KGELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEET----TEEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECC----CeEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 5678999999 89999987 77777666 443 45567899988886543
No 37
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=71.66 E-value=16 Score=22.86 Aligned_cols=34 Identities=9% Similarity=0.124 Sum_probs=29.2
Q ss_pred eeEEEEEECCCCcccCCeEEEEeCCEEEEEEeccc
Q 039913 55 GTFWMQFRMPMSADLEHVKALLENGVLRITVPKLA 89 (128)
Q Consensus 55 ~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~ 89 (128)
..|.-.+.|| +++.+.|+-.+.+|.|+|..-+..
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 4566678999 899999999999999999987754
No 38
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=71.63 E-value=8.3 Score=27.38 Aligned_cols=45 Identities=24% Similarity=0.400 Sum_probs=33.4
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEe
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVP 86 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~p 86 (128)
|++++|++++ +.++|+|. .|...|.|.-| . ++-.++++.|.|...
T Consensus 14 P~gV~v~i~~-~~V~VkGp----kG~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGP----KGELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECS----SCEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcC----CeEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4788999988 89999987 77777776422 2 445578898888754
No 39
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=69.79 E-value=13 Score=27.06 Aligned_cols=47 Identities=15% Similarity=0.312 Sum_probs=34.9
Q ss_pred CCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEecc
Q 039913 30 KENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVPKL 88 (128)
Q Consensus 30 ~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~ 88 (128)
=|+.|+|++++ +.++|+|. .|...+.| +.. +....+++.|.|..+..
T Consensus 38 IP~gV~V~i~~-~~VtVKGP----kG~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 38 VPSGVTVNAQD-GVFKVKGP----KGELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred cCCCcEEEEeC-CEEEEECC----CEEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 35788999999 79999987 77777665 433 45567899988876544
No 40
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=69.61 E-value=19 Score=23.11 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=27.4
Q ss_pred EEEEEECCCCcccCCeEEEEeC-CEEEEEEecccc
Q 039913 57 FWMQFRMPMSADLEHVKALLEN-GVLRITVPKLAE 90 (128)
Q Consensus 57 f~r~~~LP~~vd~~~i~A~~~~-G~L~I~~pK~~~ 90 (128)
|.-.+.|| +++.+.|+-.+.+ +.|+|+.-+...
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 44447899 7899999999999 999999987653
No 41
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=65.29 E-value=18 Score=25.74 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=33.3
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEE--eCCEEEEEEec
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALL--ENGVLRITVPK 87 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~--~~G~L~I~~pK 87 (128)
|+.++|++.+ +.++|+|. .|...|.|.- .. +.-.+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGP----kG~L~~~~~~-~~-----v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGP----RGKLTRNFKH-LN-----LDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEET----TEEEEEECCC-TT-----EEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECC----CceEEEEccC-Cc-----EEEEEEcCCCEEEEEECC
Confidence 5788999999 89999987 7777776531 12 44455 78888887653
No 42
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=61.52 E-value=20 Score=25.19 Aligned_cols=44 Identities=25% Similarity=0.499 Sum_probs=33.3
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEe
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVP 86 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~p 86 (128)
|++++|++++ +.++|+|. .|...|.| +.. +.-.++++.|.|...
T Consensus 12 P~gV~v~i~~-~~v~VkGp----kG~L~~~~--~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGP----KGELEVPV--SPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECS----SCEEEEEC--CTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeC----CcEEEEEe--CCC-----EEEEEECCEEEEEEC
Confidence 5789999999 89999987 77777665 433 444567899888754
No 43
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=59.54 E-value=30 Score=24.56 Aligned_cols=46 Identities=20% Similarity=0.471 Sum_probs=32.9
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEE-EeCCEEEEEEec
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKAL-LENGVLRITVPK 87 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~-~~~G~L~I~~pK 87 (128)
|+.++|++.+ +.++|+|. .|...|.|.- .. +.-. .+++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGP----kG~L~~~~~~-~~-----v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGP----RGTLTKNLKH-ID-----VTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEET----TEEEEEECTT-TC-----CEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcC----CeEEEEEccC-Cc-----EEEEEecCCeEEEEECC
Confidence 5788999999 89999987 7777776531 12 3334 468888888653
No 44
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=57.58 E-value=8.2 Score=23.18 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=19.3
Q ss_pred CCeEEEEeCCEEEEEEeccccccCCCCeEEEecc
Q 039913 70 EHVKALLENGVLRITVPKLAEEKKSRPKVISISG 103 (128)
Q Consensus 70 ~~i~A~~~~G~L~I~~pK~~~~~~~~~~~I~I~~ 103 (128)
..|.|.|+||+|.-.=|-.-+. ....+|.|..
T Consensus 3 k~IeAiYEnGVfkPLe~l~L~E--G~kV~I~I~~ 34 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKVDLKE--GERVKIKLEL 34 (69)
T ss_dssp CCEEEEEETTEEEESSCCCCCT--TEEEEEECCC
T ss_pred ceEEEEEECCEEeECCcCCCCC--CCEEEEEEEe
Confidence 4589999999997543332222 2344555554
No 45
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=55.98 E-value=18 Score=25.19 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=29.4
Q ss_pred eeeEEEEEECCCCcccCCeEEEEeCCEEEEEEeccc
Q 039913 54 SGTFWMQFRMPMSADLEHVKALLENGVLRITVPKLA 89 (128)
Q Consensus 54 ~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~~ 89 (128)
...|.-.+.|| +++.+.|+-.+.+|.|+|.--+..
T Consensus 72 ~d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 72 KDRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp CSEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred CCeEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 44566678898 889999999999999999987654
No 46
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=54.49 E-value=14 Score=24.88 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=26.2
Q ss_pred CEEEEEEEcC-CCCCCCeEEEEEcCcEEEEEEe
Q 039913 18 TAHVITLDIP-RMKENDVKIEVEENRVLRVSGR 49 (128)
Q Consensus 18 ~~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g~ 49 (128)
..|.-.+.|| +++.+.|+-.+.+ +.|.|+..
T Consensus 104 g~F~R~~~LP~~vd~~~i~A~~~n-GvL~I~lP 135 (151)
T 1gme_A 104 GKFVRRFRLLEDAKVEEVKAGLEN-GVLTVTVP 135 (151)
T ss_dssp CCEEEEEECSSCCCGGGCEEEEET-TEEEEEEE
T ss_pred cEEEEEEECCCCccccceEEEEEC-CEEEEEEE
Confidence 3577789999 7899999999988 89999843
No 47
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=52.81 E-value=19 Score=25.55 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=31.7
Q ss_pred CCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEe
Q 039913 30 KENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVP 86 (128)
Q Consensus 30 ~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~p 86 (128)
=|+.++|++.+ +.++|+|. .|...|.|.- ..++.... +++.|.|..+
T Consensus 12 IP~gV~v~i~~-~~V~VkGP----kG~L~~~~~~-~~v~i~~~----~~~~l~v~~~ 58 (188)
T 4a17_E 12 IPDKVTITAKQ-RVVEVKGP----LGTIKRAFRY-ASVDIQKP----TADNVKLQIW 58 (188)
T ss_dssp CCTTCEEEEET-TEEEEEET----TEEEEEECTT-SCCEECCC----BTTBCEEEEE
T ss_pred CCCCcEEEEeC-CEEEEEcC----CeEEEEEccC-CeEEEEEc----cCCeEEEEEC
Confidence 46889999999 89999987 7777766531 13333221 5677777654
No 48
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=51.07 E-value=27 Score=24.80 Aligned_cols=54 Identities=22% Similarity=0.169 Sum_probs=35.5
Q ss_pred EEcCCCCCCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCE---EEEEEecc
Q 039913 24 LDIPRMKENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGV---LRITVPKL 88 (128)
Q Consensus 24 ~~lPG~~~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~---L~I~~pK~ 88 (128)
...|=-=|+.++|++++ +.++|+|. .|...+.| |.. .+....+++. |.|..+..
T Consensus 6 ~k~pI~IP~gV~V~i~~-~~VtVkGp----kG~L~~~~--~~~----~v~i~~~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 6 SNQTVDIPENVDITLKG-RTVIVKGP----RGTLRRDF--NHI----NVELSLLGKKKKRLRVDKWWG 62 (192)
T ss_dssp ----CCCCTTCEEEEET-TEEEEEET----TEEEEEEC--CSS----SCEEEEETTTTCEEEEECSCC
T ss_pred ccCcEEcCCCCEEEEeC-CEEEEECC----CeEEEEEe--CCC----CEEEEEecCceeEEEEEcCCC
Confidence 34444447889999999 89999987 77777655 331 3555677887 87775543
No 49
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=44.78 E-value=34 Score=22.28 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=21.4
Q ss_pred EEEECCCCcccCCeEEEEeCCEEEEEEe
Q 039913 59 MQFRMPMSADLEHVKALLENGVLRITVP 86 (128)
Q Consensus 59 r~~~LP~~vd~~~i~A~~~~G~L~I~~p 86 (128)
-+|.||.+++.+.+...|...-|.|.+.
T Consensus 18 i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 18 IQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEECC---CCSCEEEEEETTEEEEEET
T ss_pred EEEECCCCCCccceEEEEECCEEEEEEC
Confidence 3588999999999999999999999873
No 50
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=44.77 E-value=9.2 Score=28.03 Aligned_cols=47 Identities=28% Similarity=0.461 Sum_probs=33.0
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEEecc
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITVPKL 88 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~pK~ 88 (128)
|+.|+|.+++ +.++|+|. .|...+.| +..++.. ..+++.|.|..+..
T Consensus 54 P~gV~V~i~~-~~VtVKGP----kG~L~~~~--~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGP----LGELALTY--PREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESS-SEEEECCS----SCCEEEEC--CSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeC-CEEEEECC----CeEEEEEc--CCCEEEE----EecCCEEEEEcCCC
Confidence 5778899988 79999987 67777655 5444331 45788888876543
No 51
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=44.08 E-value=14 Score=26.01 Aligned_cols=43 Identities=14% Similarity=0.306 Sum_probs=32.0
Q ss_pred CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEEE
Q 039913 31 ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRITV 85 (128)
Q Consensus 31 ~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~~ 85 (128)
|++++|++++ +.++|+|. .|...+.| +.. +.-.++++.|.|..
T Consensus 11 P~gV~v~i~~-~~V~VkGp----kG~L~~~~--~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGK----NGELTRTL--NDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBT----TBCCEEEC--CSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcC----CEEEEEEC--CCC-----EEEEEeCCEEEEEE
Confidence 5778889988 79999977 67777665 443 44557889988873
No 52
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=37.98 E-value=20 Score=23.00 Aligned_cols=16 Identities=31% Similarity=0.536 Sum_probs=14.3
Q ss_pred CeEEEEeCCEEEEEEe
Q 039913 71 HVKALLENGVLRITVP 86 (128)
Q Consensus 71 ~i~A~~~~G~L~I~~p 86 (128)
.+.+.+.+|+|+|+++
T Consensus 29 d~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEINGGVLTITFE 44 (106)
T ss_dssp CCEEEEETTEEEEECT
T ss_pred CEeeeccCCEEEEEEC
Confidence 4888899999999997
No 53
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=36.74 E-value=60 Score=20.91 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=26.5
Q ss_pred EEEcCCEEEEEEEc-CCCCCCCeEEEEEcCcEEEEEEe
Q 039913 13 WKETRTAHVITLDI-PRMKENDVKIEVEENRVLRVSGR 49 (128)
Q Consensus 13 i~e~~~~~~l~~~l-PG~~~edi~V~v~~~~~L~I~g~ 49 (128)
|...++.++|.+.+ ||-+++.| ..+.+ +.|.|+-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~-~~LkV~v~ 43 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHG-DEVKVAIT 43 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECS-SCEEEECC
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccC-CEEEEEEe
Confidence 45677888898887 89999877 34666 67888755
No 54
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=30.64 E-value=66 Score=21.73 Aligned_cols=27 Identities=11% Similarity=0.329 Sum_probs=23.7
Q ss_pred EEEECCCCcccCCeEEEEeCCEEEEEE
Q 039913 59 MQFRMPMSADLEHVKALLENGVLRITV 85 (128)
Q Consensus 59 r~~~LP~~vd~~~i~A~~~~G~L~I~~ 85 (128)
-+|.||..+..+.+...+...-|.|.+
T Consensus 27 v~I~lp~~~~~kdv~V~i~~~~L~v~~ 53 (157)
T 2rh0_A 27 IEVQVPPGTRAQDIQCGLQSRHVALAV 53 (157)
T ss_dssp EEEECCTTCCGGGEEEEECSSEEEEEE
T ss_pred EEEECCCCCcccceEEEEecCEEEEEE
Confidence 358899999999999999999999987
No 55
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=30.15 E-value=41 Score=22.26 Aligned_cols=15 Identities=27% Similarity=0.609 Sum_probs=13.7
Q ss_pred eEEEEeCCEEEEEEe
Q 039913 72 VKALLENGVLRITVP 86 (128)
Q Consensus 72 i~A~~~~G~L~I~~p 86 (128)
+.+.+.+|+|+|.++
T Consensus 49 ~Dve~~~gVLti~f~ 63 (123)
T 3oeq_A 49 PDVELSHGVMTLEIP 63 (123)
T ss_dssp CEEEECSSEEEEECT
T ss_pred eEEEccCCEEEEEEC
Confidence 788899999999997
No 56
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=26.24 E-value=40 Score=20.13 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=17.8
Q ss_pred CCCCCCeEEEEEcCcEEEEEEe
Q 039913 28 RMKENDVKIEVEENRVLRVSGR 49 (128)
Q Consensus 28 G~~~edi~V~v~~~~~L~I~g~ 49 (128)
-|+.+.|.+.... +.|.|+|+
T Consensus 17 sFd~e~i~L~T~~-G~L~IkG~ 37 (71)
T 2ks0_A 17 SFDPKEILLETIQ-GVLSIKGE 37 (71)
T ss_dssp EECSSEEEEEETT-EEEEEEEE
T ss_pred EECCCEEEEEeCc-eEEEEEcC
Confidence 4678888888888 89999988
No 57
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=24.78 E-value=51 Score=21.89 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=14.7
Q ss_pred CCeEEEEeCCEEEEEEe
Q 039913 70 EHVKALLENGVLRITVP 86 (128)
Q Consensus 70 ~~i~A~~~~G~L~I~~p 86 (128)
..+.+.+.+|+|+|.++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999996
No 58
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=24.05 E-value=76 Score=20.32 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=20.0
Q ss_pred EEEEE--CCCCcccCCeEEEEeCCEEEEEEeccccccCCCCeEEEec
Q 039913 58 WMQFR--MPMSADLEHVKALLENGVLRITVPKLAEEKKSRPKVISIS 102 (128)
Q Consensus 58 ~r~~~--LP~~vd~~~i~A~~~~G~L~I~~pK~~~~~~~~~~~I~I~ 102 (128)
.|++. +| ++|.++|.+|.|.+.+.-. .-.|.|.
T Consensus 22 ~RSI~~~iP-------i~A~id~~~L~I~F~~~~~-----~vtItI~ 56 (108)
T 3d33_A 22 IRSAATNCP-------ITVFTDGYLLTLKNASPDR-----DMTIRIT 56 (108)
T ss_dssp ------CCS-------EEEEEETTEEEEEESSCCS-----EEEEEEE
T ss_pred ccccCCCCC-------cEEEEECCEEEEEECCcCC-----CEEEEEE
Confidence 67775 45 8899999999999965442 4455555
No 59
>3sz6_A Conserved domain protein; IG fold, hemophore, heme-binding protein; 1.80A {Bacillus anthracis} PDB: 3sik_A*
Probab=24.02 E-value=1.5e+02 Score=19.13 Aligned_cols=76 Identities=5% Similarity=0.114 Sum_probs=40.7
Q ss_pred CCCceeeEEEcCCEEEEEEEcCCCC-CCCeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEE
Q 039913 6 LALARADWKETRTAHVITLDIPRMK-ENDVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLEHVKALLENGVLRIT 84 (128)
Q Consensus 6 ~~~p~~di~e~~~~~~l~~~lPG~~-~edi~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~ 84 (128)
....+..+...++.+.+.+.|-.-+ -.+++|..++ ..+-+...++...+. .|++.||-.=..+.+.| .+.|.
T Consensus 33 Y~~~pa~v~vknGk~~v~~tl~~s~~ik~f~v~~~G-~~~~~~vvs~d~~~n-t~~v~F~v~~l~~~i~~-----~v~V~ 105 (121)
T 3sz6_A 33 YFESPATLTVKNGKQYVSFKVKDSTSIKSFQVEKDG-QFVETTVLSENKKDN-TRVVEFEVADLSKKLNG-----KVKIN 105 (121)
T ss_dssp GBCSSEEEEEETTEEEEEEEESSGGGEEEEEEESSS-SEEECEEEEEETTTT-EEEEEEECSCTTSCEEE-----EEEEE
T ss_pred hccCCEEEEEECCEEEEEEEECChhheeEEEEecCC-EEeeeEEEEeccCCC-EEEEEEEeCCCCceEEE-----EEEEE
Confidence 3456777888889999999886431 2345555433 323222222333333 56666663323334444 34566
Q ss_pred Eecc
Q 039913 85 VPKL 88 (128)
Q Consensus 85 ~pK~ 88 (128)
+|..
T Consensus 106 vp~i 109 (121)
T 3sz6_A 106 IPII 109 (121)
T ss_dssp CTTS
T ss_pred eCCc
Confidence 6654
No 60
>1lpj_A Retinol-binding protein IV, cellular; cellular retinol-binding protein, CRBP, vitamin A, ILBPS, transport protein; 2.00A {Homo sapiens} SCOP: b.60.1.2
Probab=23.32 E-value=1.6e+02 Score=19.13 Aligned_cols=49 Identities=14% Similarity=0.272 Sum_probs=27.3
Q ss_pred CeEEEEEcCcEEEEEEeeeceeeeEEEEEECCCCcccC-------CeE--EEEeCCEEEEE
Q 039913 33 DVKIEVEENRVLRVSGRGRRTSGTFWMQFRMPMSADLE-------HVK--ALLENGVLRIT 84 (128)
Q Consensus 33 di~V~v~~~~~L~I~g~~e~~~~~f~r~~~LP~~vd~~-------~i~--A~~~~G~L~I~ 84 (128)
.+.|..++ +.+.|+-. ....+..-.|.|...++.. .++ ..+++|.|...
T Consensus 39 ~~ei~~~G-d~~~ikt~--s~~k~~~~~F~lGeefee~t~~~dgrk~ks~~t~eg~kLv~~ 96 (133)
T 1lpj_A 39 QKVIEQNG-DSFTIHTN--SSLRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCI 96 (133)
T ss_dssp EEEEEEET-TEEEEEEE--CSSCCEEEEEETTCCEEEECTTTTCCEEEEEEEEETTEEEEE
T ss_pred eEEEEEcC-CEEEEEEE--eCCceeEEEeeCCCceEEEccCCCCCEEEEEEEEECCEEEEE
Confidence 45566666 56666633 3344555567777665432 333 44577777663
No 61
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=22.53 E-value=2.2e+02 Score=20.52 Aligned_cols=58 Identities=16% Similarity=0.266 Sum_probs=38.0
Q ss_pred EcCCCCCCCeE-EEEEc-CcEEEEEEe------eeceeeeEEEEEECCCCcccCCeEEEEeCCEEEEE
Q 039913 25 DIPRMKENDVK-IEVEE-NRVLRVSGR------GRRTSGTFWMQFRMPMSADLEHVKALLENGVLRIT 84 (128)
Q Consensus 25 ~lPG~~~edi~-V~v~~-~~~L~I~g~------~e~~~~~f~r~~~LP~~vd~~~i~A~~~~G~L~I~ 84 (128)
.|||+..+ ++ +..+. ++.|.+... .-...+.+.|+++|...-|.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~-lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNN-ISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSC-EEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccC-cceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 58999875 55 66662 256665433 11123788999999877788887653 66766664
No 62
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=21.08 E-value=1.7e+02 Score=18.57 Aligned_cols=27 Identities=15% Similarity=0.302 Sum_probs=23.7
Q ss_pred EEECCCCc-ccCCeEEEEeCCEEEEEEe
Q 039913 60 QFRMPMSA-DLEHVKALLENGVLRITVP 86 (128)
Q Consensus 60 ~~~LP~~v-d~~~i~A~~~~G~L~I~~p 86 (128)
+|.||..+ +.+.+...|....|.|.+.
T Consensus 34 ~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 34 RVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp EEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred EEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 48899888 9999999999999999873
No 63
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=20.20 E-value=44 Score=20.31 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=12.4
Q ss_pred cCCeEEEEeCCEEEE
Q 039913 69 LEHVKALLENGVLRI 83 (128)
Q Consensus 69 ~~~i~A~~~~G~L~I 83 (128)
.++-++.|++|+|+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 446789999999987
Done!