Query 039922
Match_columns 973
No_of_seqs 949 out of 6666
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.2E-82 2.1E-86 779.7 39.5 590 23-625 7-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 3.3E-65 1.1E-69 630.4 27.8 514 73-590 127-742 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-59 5.3E-64 574.9 40.7 543 72-616 25-627 (680)
4 3t6q_A CD180 antigen; protein- 100.0 1.1E-57 3.6E-62 551.0 35.2 526 80-616 20-565 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 8E-57 2.7E-61 550.8 39.7 521 72-594 49-627 (680)
6 3vq2_A TLR4, TOLL-like recepto 100.0 5.4E-57 1.8E-61 544.8 33.7 525 77-616 16-563 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 2.4E-56 8.4E-61 556.9 39.4 518 60-593 14-564 (844)
8 4eco_A Uncharacterized protein 100.0 9.4E-58 3.2E-62 550.8 22.2 514 28-589 30-600 (636)
9 3t6q_A CD180 antigen; protein- 100.0 2.9E-56 1E-60 538.4 34.0 499 100-609 16-534 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 2.7E-56 9.2E-61 545.4 32.4 498 27-589 268-864 (876)
11 3j0a_A TOLL-like receptor 5; m 100.0 4E-56 1.4E-60 555.0 32.3 524 77-616 9-565 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-55 5.2E-60 532.1 29.7 510 72-594 32-563 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 2E-52 6.9E-57 501.3 31.7 496 88-595 22-537 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-51 4.5E-56 491.7 23.8 485 59-593 3-514 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 2.7E-50 9.1E-55 482.9 27.7 490 72-572 28-537 (570)
16 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-50 4.7E-55 436.4 18.9 259 682-970 13-288 (299)
17 4eco_A Uncharacterized protein 100.0 2.1E-50 7.3E-55 486.7 22.4 453 121-614 81-603 (636)
18 4gt4_A Tyrosine-protein kinase 100.0 1.9E-50 6.6E-55 437.2 19.1 260 682-970 26-305 (308)
19 4aoj_A High affinity nerve gro 100.0 4.2E-50 1.4E-54 438.8 21.7 259 682-970 41-318 (329)
20 3omv_A RAF proto-oncogene seri 100.0 7.6E-50 2.6E-54 430.2 22.3 262 681-970 35-299 (307)
21 4b9d_A Serine/threonine-protei 100.0 1.2E-49 4.2E-54 434.3 18.9 254 681-965 23-277 (350)
22 2z81_A CD282 antigen, TOLL-lik 100.0 4.8E-49 1.7E-53 469.5 22.9 481 60-570 12-514 (549)
23 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-49 1.5E-53 466.4 21.5 452 76-592 4-484 (520)
24 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-47 1.1E-51 462.5 34.1 555 43-616 8-585 (635)
25 2z7x_B TOLL-like receptor 1, v 100.0 5E-49 1.7E-53 465.9 17.3 432 145-616 21-486 (520)
26 4fih_A Serine/threonine-protei 100.0 8.9E-49 3E-53 426.8 17.8 251 681-965 73-324 (346)
27 3hmm_A TGF-beta receptor type- 100.0 2E-48 6.9E-53 422.9 19.1 269 682-970 3-296 (303)
28 3fpq_A Serine/threonine-protei 100.0 1.9E-48 6.3E-53 416.3 17.9 247 685-965 29-283 (290)
29 4g3f_A NF-kappa-beta-inducing 100.0 1.8E-48 6.2E-53 423.2 17.8 254 681-968 57-313 (336)
30 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-48 4.4E-53 419.1 15.3 251 681-963 31-283 (311)
31 3hyh_A Carbon catabolite-derep 100.0 8E-48 2.8E-52 407.5 21.2 250 680-965 11-263 (275)
32 4ecn_A Leucine-rich repeat pro 100.0 1.3E-47 4.5E-52 468.7 24.2 369 218-597 423-848 (876)
33 4fie_A Serine/threonine-protei 100.0 1.2E-47 3.9E-52 428.4 19.3 253 679-965 148-401 (423)
34 4ase_A Vascular endothelial gr 100.0 1.1E-47 3.6E-52 423.0 16.7 261 681-969 63-345 (353)
35 3ubd_A Ribosomal protein S6 ki 100.0 6.4E-48 2.2E-52 414.0 13.6 251 681-965 23-282 (304)
36 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-45 5.7E-50 447.4 32.5 508 73-591 53-582 (635)
37 4g31_A Eukaryotic translation 100.0 2.1E-46 7.1E-51 404.7 18.5 255 682-965 5-280 (299)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.6E-46 2.9E-50 441.8 22.5 456 75-570 34-514 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1E-45 3.5E-50 441.2 21.1 456 95-594 30-515 (562)
40 4b99_A Mitogen-activated prote 100.0 7.7E-45 2.6E-49 407.5 18.2 277 680-965 52-345 (398)
41 4f9c_A Cell division cycle 7-r 100.0 2.9E-43 9.8E-48 390.8 18.5 204 678-894 17-251 (361)
42 3v47_A TOLL-like receptor 5B a 100.0 1.2E-41 4E-46 395.7 27.9 380 124-570 13-412 (455)
43 1jl5_A Outer protein YOPM; leu 100.0 2.6E-42 8.9E-47 397.7 21.9 386 119-590 9-410 (454)
44 3v47_A TOLL-like receptor 5B a 100.0 9E-42 3.1E-46 396.7 25.4 363 96-498 30-412 (455)
45 1jl5_A Outer protein YOPM; leu 100.0 1E-41 3.5E-46 392.8 24.8 418 73-594 12-434 (454)
46 3v5w_A G-protein coupled recep 100.0 2.8E-42 9.6E-47 401.4 20.2 251 681-965 188-450 (689)
47 3uto_A Twitchin; kinase, muscl 100.0 2.9E-42 9.8E-47 406.3 19.5 256 678-965 153-411 (573)
48 2qkw_B Protein kinase; three-h 100.0 3.5E-41 1.2E-45 372.3 26.7 277 678-969 35-313 (321)
49 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-41 5.2E-46 372.7 20.2 295 25-375 3-306 (313)
50 3uim_A Brassinosteroid insensi 100.0 3.7E-41 1.3E-45 373.1 19.8 289 670-970 17-310 (326)
51 3p86_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 365.4 18.3 260 681-970 36-297 (309)
52 3fe3_A MAP/microtubule affinit 100.0 2.4E-40 8.3E-45 365.0 20.9 253 678-965 11-265 (328)
53 3s95_A LIMK-1, LIM domain kina 100.0 5.4E-40 1.8E-44 360.9 21.6 258 681-970 9-281 (310)
54 3fxz_A Serine/threonine-protei 100.0 6.3E-40 2.2E-44 357.5 20.8 253 679-965 17-270 (297)
55 3zgw_A Maternal embryonic leuc 100.0 4.7E-40 1.6E-44 364.6 19.8 255 678-966 6-262 (347)
56 2nru_A Interleukin-1 receptor- 100.0 2.2E-39 7.6E-44 355.6 24.9 285 672-972 14-307 (307)
57 3bz5_A Internalin-J, INLJ; leu 100.0 2.4E-39 8.1E-44 373.4 25.6 411 84-596 30-450 (457)
58 2psq_A Fibroblast growth facto 100.0 9.7E-40 3.3E-44 367.1 21.5 260 681-969 80-362 (370)
59 2yab_A Death-associated protei 100.0 8.3E-40 2.8E-44 365.0 20.8 258 677-965 7-273 (361)
60 3niz_A Rhodanese family protei 100.0 2.2E-39 7.6E-44 355.7 23.3 276 678-965 17-301 (311)
61 3q4u_A Activin receptor type-1 100.0 1.1E-39 3.7E-44 357.0 19.6 266 679-969 5-300 (301)
62 3kul_A Ephrin type-A receptor 100.0 1.2E-39 4.3E-44 359.9 19.9 261 680-970 47-312 (325)
63 4hcu_A Tyrosine-protein kinase 100.0 8.5E-40 2.9E-44 351.5 17.7 257 682-972 10-267 (269)
64 1tki_A Titin; serine kinase, m 100.0 8.7E-40 3E-44 360.1 18.1 255 679-966 2-259 (321)
65 3bz5_A Internalin-J, INLJ; leu 100.0 9.5E-40 3.2E-44 376.7 18.9 357 116-596 37-394 (457)
66 2bdw_A Hypothetical protein K1 100.0 1.6E-39 5.5E-44 363.9 19.3 256 679-965 26-285 (362)
67 3soa_A Calcium/calmodulin-depe 100.0 2E-39 6.9E-44 371.5 20.3 257 679-965 8-268 (444)
68 4euu_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 355.3 22.1 277 681-970 8-308 (319)
69 2qol_A Ephrin receptor; recept 100.0 1.5E-39 5.2E-44 365.7 18.9 260 680-969 43-307 (373)
70 3cbl_A C-FES, proto-oncogene t 100.0 4.5E-40 1.5E-44 371.3 14.5 261 681-972 113-375 (377)
71 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.4E-39 8.1E-44 347.9 19.4 257 681-971 7-264 (268)
72 3tki_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 358.3 17.4 257 680-966 5-263 (323)
73 2y0a_A Death-associated protei 100.0 3.2E-39 1.1E-43 356.8 19.5 257 678-965 7-272 (326)
74 1o6l_A RAC-beta serine/threoni 100.0 5.1E-39 1.7E-43 355.4 21.1 251 681-965 4-261 (337)
75 3o0g_A Cell division protein k 100.0 1E-38 3.5E-43 347.5 22.5 272 682-965 2-283 (292)
76 3lb7_A RAF proto-oncogene seri 100.0 9.8E-39 3.3E-43 349.7 22.3 263 680-970 34-299 (307)
77 3soc_A Activin receptor type-2 100.0 2.5E-39 8.6E-44 357.2 17.5 267 682-970 24-317 (322)
78 1kob_A Twitchin; kinase, intra 100.0 5.5E-39 1.9E-43 361.7 20.4 260 674-965 43-305 (387)
79 1ob3_A PFPK5, cell division co 100.0 7.3E-39 2.5E-43 347.8 20.1 271 682-965 2-281 (288)
80 2c30_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 351.1 21.2 249 684-966 47-296 (321)
81 3gen_A Tyrosine-protein kinase 100.0 5.9E-39 2E-43 347.8 18.1 255 681-969 23-278 (283)
82 3l9p_A Anaplastic lymphoma kin 100.0 3.8E-39 1.3E-43 362.0 16.9 262 680-970 69-344 (367)
83 4eqm_A Protein kinase; transfe 100.0 3E-38 1E-42 343.9 23.4 263 679-969 8-273 (294)
84 4f0f_A Serine/threonine-protei 100.0 2.2E-38 7.4E-43 344.1 21.3 254 681-968 18-286 (287)
85 3qd2_B Eukaryotic translation 100.0 4.3E-39 1.5E-43 357.5 15.9 257 680-965 4-326 (332)
86 1luf_A Muscle-specific tyrosin 100.0 1.2E-38 4.3E-43 355.6 19.4 263 680-971 45-335 (343)
87 3tt0_A Basic fibroblast growth 100.0 1.5E-38 5.3E-43 359.6 20.4 260 681-969 68-350 (382)
88 3kk8_A Calcium/calmodulin depe 100.0 2.1E-38 7E-43 343.7 20.4 256 679-965 3-262 (284)
89 3c0i_A Peripheral plasma membr 100.0 3.5E-39 1.2E-43 360.2 14.4 259 679-965 21-287 (351)
90 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-38 7.5E-43 347.8 20.4 248 681-965 5-259 (318)
91 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.3E-39 1.8E-43 357.7 15.5 251 681-965 22-281 (353)
92 3mdy_A Bone morphogenetic prot 100.0 3.5E-38 1.2E-42 351.0 22.1 273 678-972 33-332 (337)
93 4fr4_A YANK1, serine/threonine 100.0 2.2E-38 7.5E-43 355.4 20.5 252 680-964 13-271 (384)
94 3t9t_A Tyrosine-protein kinase 100.0 1.2E-38 3.9E-43 342.3 17.3 257 682-972 8-265 (267)
95 3qup_A Tyrosine-protein kinase 100.0 1.3E-38 4.3E-43 352.3 18.1 262 681-970 22-297 (323)
96 3ugc_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 347.8 17.3 266 681-971 9-291 (295)
97 2zv2_A Calcium/calmodulin-depe 100.0 1.6E-38 5.5E-43 347.0 18.5 252 681-965 12-293 (298)
98 2ivs_A Proto-oncogene tyrosine 100.0 1.9E-38 6.6E-43 349.3 19.3 261 681-970 22-310 (314)
99 2eva_A TAK1 kinase - TAB1 chim 100.0 1.4E-38 4.9E-43 348.7 18.1 254 682-970 8-262 (307)
100 3poz_A Epidermal growth factor 100.0 1.1E-38 3.9E-43 352.8 17.5 256 682-969 15-276 (327)
101 1qcf_A Haematopoetic cell kina 100.0 9.3E-39 3.2E-43 369.5 17.2 257 681-971 187-444 (454)
102 3kmu_A ILK, integrin-linked ki 100.0 2E-38 6.7E-43 341.3 18.4 255 681-971 9-270 (271)
103 3vhe_A Vascular endothelial gr 100.0 9.4E-39 3.2E-43 358.9 16.4 262 681-970 21-354 (359)
104 1o6v_A Internalin A; bacterial 100.0 2.7E-37 9.1E-42 359.4 29.0 235 94-374 44-278 (466)
105 3g33_A Cell division protein k 100.0 1.1E-37 3.9E-42 342.0 24.3 273 680-965 7-297 (308)
106 1k9a_A Carboxyl-terminal SRC k 100.0 3.2E-38 1.1E-42 364.3 20.7 252 681-971 192-445 (450)
107 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.4E-39 3.2E-43 352.8 15.5 250 680-965 7-259 (336)
108 3p1a_A MYT1 kinase, membrane-a 100.0 9.8E-39 3.3E-43 350.7 15.5 248 681-965 56-305 (311)
109 3gni_B Strad alpha; kinase fol 100.0 2.9E-38 9.8E-43 358.7 19.8 280 681-965 24-334 (389)
110 4agu_A Cyclin-dependent kinase 100.0 2.8E-38 9.4E-43 347.6 18.9 273 681-965 2-285 (311)
111 2pmi_A Negative RE, cyclin-dep 100.0 3.7E-38 1.3E-42 347.0 20.0 273 681-965 4-294 (317)
112 3og7_A AKAP9-BRAF fusion prote 100.0 2.5E-38 8.7E-43 343.8 18.4 264 679-970 21-287 (289)
113 4dc2_A Protein kinase C IOTA t 100.0 3.6E-38 1.2E-42 354.8 20.0 253 681-965 51-319 (396)
114 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.2E-38 1.1E-42 351.2 19.4 248 681-965 40-294 (350)
115 1o6v_A Internalin A; bacterial 100.0 4.7E-37 1.6E-41 357.3 30.0 342 73-494 47-388 (466)
116 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-38 4.4E-43 355.2 16.1 254 678-965 49-306 (349)
117 3gxj_A TGF-beta receptor type- 100.0 6.8E-40 2.3E-44 359.0 5.5 266 681-971 2-297 (303)
118 1opk_A P150, C-ABL, proto-onco 100.0 2.1E-38 7.1E-43 370.0 18.3 257 681-970 219-477 (495)
119 3a8x_A Protein kinase C IOTA t 100.0 5.9E-38 2E-42 348.6 21.0 253 681-965 8-276 (345)
120 3dbq_A Dual specificity protei 100.0 1.7E-38 5.8E-43 353.9 16.6 255 681-966 8-275 (343)
121 2a2a_A Death-associated protei 100.0 3.6E-38 1.2E-42 348.0 18.9 257 678-965 8-273 (321)
122 2eue_A Carbon catabolite derep 100.0 5.4E-38 1.9E-42 338.6 19.8 252 678-965 9-263 (275)
123 1xjd_A Protein kinase C, theta 100.0 1.2E-38 4.1E-43 353.3 15.0 251 680-964 15-269 (345)
124 3a62_A Ribosomal protein S6 ki 100.0 6.4E-38 2.2E-42 346.5 20.7 251 681-965 16-277 (327)
125 2x4f_A Myosin light chain kina 100.0 3.2E-38 1.1E-42 354.7 18.6 248 686-965 93-343 (373)
126 4fvq_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 350.2 10.7 253 681-972 7-276 (289)
127 1mp8_A Focal adhesion kinase 1 100.0 3.4E-38 1.1E-42 341.4 17.9 257 680-969 13-274 (281)
128 1rjb_A FL cytokine receptor; k 100.0 3.3E-38 1.1E-42 352.2 18.3 262 681-970 44-333 (344)
129 1p4o_A Insulin-like growth fac 100.0 3.2E-38 1.1E-42 348.9 17.9 264 678-970 21-298 (322)
130 3mi9_A Cell division protein k 100.0 8.9E-38 3.1E-42 349.6 21.7 279 679-965 14-312 (351)
131 1b6c_B TGF-B superfamily recep 100.0 4.5E-38 1.6E-42 350.9 19.0 268 678-970 38-335 (342)
132 3hko_A Calcium/calmodulin-depe 100.0 1.8E-38 6.2E-43 354.5 15.7 265 678-965 22-331 (345)
133 3dtc_A Mitogen-activated prote 100.0 2.4E-38 8.4E-43 340.6 16.1 256 681-969 6-271 (271)
134 2pvf_A Fibroblast growth facto 100.0 6.4E-38 2.2E-42 348.1 19.9 260 681-969 34-316 (334)
135 3c1x_A Hepatocyte growth facto 100.0 2.2E-38 7.4E-43 355.8 16.2 258 684-970 91-354 (373)
136 2izr_A Casein kinase I isoform 100.0 9.5E-38 3.2E-42 346.1 21.1 262 680-969 7-279 (330)
137 2i0e_A Protein kinase C-beta I 100.0 4.2E-38 1.4E-42 350.2 18.2 251 681-965 19-277 (353)
138 3kex_A Receptor tyrosine-prote 100.0 3.5E-38 1.2E-42 348.7 17.2 256 682-969 13-274 (325)
139 3f3z_A Calcium/calmodulin-depe 100.0 4.9E-38 1.7E-42 339.4 17.9 253 679-965 6-262 (277)
140 3op5_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43 356.0 15.7 271 680-969 33-327 (364)
141 1t46_A HOMO sapiens V-KIT hard 100.0 5.9E-38 2E-42 345.3 18.6 262 681-970 22-306 (313)
142 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.4E-38 1.5E-42 348.4 17.6 274 678-965 30-319 (329)
143 3kfa_A Tyrosine-protein kinase 100.0 5.8E-38 2E-42 340.9 18.1 257 680-969 11-269 (288)
144 2wqm_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 344.1 18.9 264 680-970 30-296 (310)
145 3f66_A Hepatocyte growth facto 100.0 7.4E-38 2.5E-42 341.8 18.8 261 682-970 25-290 (298)
146 1csn_A Casein kinase-1; phosph 100.0 1.3E-37 4.5E-42 339.9 20.7 264 679-969 7-281 (298)
147 1mqb_A Ephrin type-A receptor 100.0 1.2E-37 4.2E-42 345.4 20.7 262 678-969 40-307 (333)
148 3ttj_A Mitogen-activated prote 100.0 8.5E-38 2.9E-42 361.1 20.1 271 679-965 59-356 (464)
149 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3E-38 1E-42 364.7 16.2 256 681-970 183-439 (452)
150 3uc3_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 351.8 17.6 254 680-965 18-275 (361)
151 2zmd_A Dual specificity protei 100.0 4.6E-38 1.6E-42 355.9 17.3 254 682-966 56-322 (390)
152 4eut_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 357.4 17.2 276 681-969 8-307 (396)
153 4aw2_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 362.4 13.6 259 679-965 71-339 (437)
154 2w5a_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 340.8 15.4 258 681-968 5-271 (279)
155 3pls_A Macrophage-stimulating 100.0 1.2E-37 4.2E-42 340.2 19.8 258 684-969 23-285 (298)
156 1u59_A Tyrosine-protein kinase 100.0 1E-37 3.4E-42 338.7 18.9 256 683-969 10-270 (287)
157 1xbb_A Tyrosine-protein kinase 100.0 6E-38 2E-42 341.3 17.1 257 682-969 16-277 (291)
158 3llt_A Serine/threonine kinase 100.0 8E-38 2.7E-42 351.4 18.6 277 672-965 24-356 (360)
159 2y94_A 5'-AMP-activated protei 100.0 9E-38 3.1E-42 359.9 19.5 251 680-965 14-267 (476)
160 3v8s_A RHO-associated protein 100.0 1.2E-38 3.9E-43 360.9 11.8 257 680-966 67-331 (410)
161 3ork_A Serine/threonine protei 100.0 1.8E-38 6E-43 348.9 12.7 261 678-965 8-274 (311)
162 3fdn_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 336.4 19.3 251 680-966 7-259 (279)
163 2i1m_A Macrophage colony-stimu 100.0 7.7E-38 2.6E-42 347.5 17.8 262 680-969 44-324 (333)
164 3dls_A PAS domain-containing s 100.0 2.9E-38 1E-42 350.1 14.3 248 678-966 20-276 (335)
165 3oz6_A Mitogen-activated prote 100.0 2.8E-38 9.6E-43 358.5 14.5 277 678-965 5-329 (388)
166 3kn6_A Ribosomal protein S6 ki 100.0 2.6E-38 9.1E-43 349.1 13.7 248 687-965 16-271 (325)
167 1nxk_A MAP kinase-activated pr 100.0 1.3E-37 4.3E-42 353.3 19.7 255 678-966 57-323 (400)
168 3brb_A Proto-oncogene tyrosine 100.0 1.2E-37 4.1E-42 342.8 18.9 262 681-970 33-307 (313)
169 2ac3_A MAP kinase-interacting 100.0 8.6E-38 2.9E-42 344.5 17.7 261 679-965 9-296 (316)
170 2r5t_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 349.1 18.9 249 681-963 37-288 (373)
171 1u5q_A Serine/threonine protei 100.0 5.3E-38 1.8E-42 349.6 16.1 250 681-966 53-307 (348)
172 2yex_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 336.4 18.2 256 681-966 6-263 (276)
173 3lm5_A Serine/threonine-protei 100.0 7.8E-38 2.7E-42 346.1 16.8 266 671-965 16-288 (327)
174 1qpc_A LCK kinase; alpha beta 100.0 9.7E-38 3.3E-42 337.4 17.1 255 681-969 12-267 (279)
175 4ejn_A RAC-alpha serine/threon 100.0 4.1E-38 1.4E-42 363.7 14.9 251 681-965 147-405 (446)
176 3lzb_A Epidermal growth factor 100.0 1.1E-37 3.8E-42 344.6 17.7 258 681-970 14-277 (327)
177 2vd5_A DMPK protein; serine/th 100.0 3.7E-38 1.3E-42 357.0 14.0 258 680-965 59-328 (412)
178 3lij_A Calcium/calmodulin depe 100.0 1.6E-37 5.5E-42 363.4 19.7 256 678-965 33-292 (494)
179 1cm8_A Phosphorylated MAP kina 100.0 3.1E-37 1.1E-41 346.3 21.2 268 678-965 21-308 (367)
180 3is5_A Calcium-dependent prote 100.0 7.8E-38 2.7E-42 339.1 15.8 257 678-965 18-279 (285)
181 2id5_A Lingo-1, leucine rich r 100.0 7.5E-37 2.6E-41 357.3 25.2 330 243-595 33-362 (477)
182 2acx_A G protein-coupled recep 100.0 5.9E-38 2E-42 365.7 15.7 254 681-965 183-445 (576)
183 3cc6_A Protein tyrosine kinase 100.0 2E-37 6.9E-42 335.3 18.8 256 681-969 11-271 (281)
184 2v62_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 347.1 17.5 270 681-970 36-327 (345)
185 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-38 8.5E-43 348.8 11.5 265 680-970 28-309 (318)
186 3mtl_A Cell division protein k 100.0 4.8E-38 1.6E-42 347.3 13.7 271 682-965 2-282 (324)
187 3rp9_A Mitogen-activated prote 100.0 1.3E-37 4.3E-42 361.2 17.8 202 678-886 49-280 (458)
188 2ozo_A Tyrosine-protein kinase 100.0 2.2E-37 7.6E-42 369.7 20.2 250 689-969 343-596 (613)
189 2qr7_A Ribosomal protein S6 ki 100.0 7.8E-38 2.7E-42 347.1 14.9 254 678-965 18-278 (342)
190 4e5w_A Tyrosine-protein kinase 100.0 1.4E-37 4.7E-42 340.4 16.7 263 682-969 21-300 (302)
191 3bhy_A Death-associated protei 100.0 1.7E-37 5.9E-42 336.3 17.2 253 682-965 5-266 (283)
192 2yfx_A Tyrosine-protein kinase 100.0 2.2E-37 7.6E-42 342.7 18.3 263 679-970 27-303 (327)
193 3mwu_A Calmodulin-domain prote 100.0 1.4E-37 4.8E-42 363.4 17.6 256 678-965 18-277 (486)
194 1t4h_A Serine/threonine-protei 100.0 1.8E-37 6.3E-42 337.3 17.2 249 683-965 27-283 (290)
195 2jam_A Calcium/calmodulin-depe 100.0 1.9E-37 6.4E-42 339.6 17.2 253 679-965 6-262 (304)
196 3lxl_A Tyrosine-protein kinase 100.0 7.4E-38 2.5E-42 346.6 14.1 273 682-970 23-302 (327)
197 2xir_A Vascular endothelial gr 100.0 1.9E-37 6.6E-42 341.7 17.3 262 681-970 26-309 (316)
198 4aaa_A Cyclin-dependent kinase 100.0 1.3E-37 4.4E-42 345.2 15.7 273 681-965 24-307 (331)
199 3cok_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 335.7 15.7 253 680-965 9-263 (278)
200 2r3i_A Cell division protein k 100.0 8.6E-37 2.9E-41 333.6 21.7 272 682-965 3-284 (299)
201 2h34_A Serine/threonine-protei 100.0 2.4E-37 8.4E-42 339.3 17.4 262 678-969 30-294 (309)
202 1x8b_A WEE1HU, WEE1-like prote 100.0 2.2E-37 7.7E-42 336.3 16.9 250 680-966 9-281 (289)
203 2clq_A Mitogen-activated prote 100.0 5E-37 1.7E-41 334.8 19.5 255 681-965 21-279 (295)
204 3q5i_A Protein kinase; CDPK, m 100.0 5.1E-37 1.7E-41 360.1 21.0 257 678-966 32-303 (504)
205 4fl3_A Tyrosine-protein kinase 100.0 2.2E-37 7.6E-42 370.5 18.2 251 688-969 375-629 (635)
206 2y7j_A Phosphorylase B kinase 100.0 3.6E-37 1.2E-41 345.7 18.6 256 679-965 91-360 (365)
207 3nyv_A Calmodulin-domain prote 100.0 2.2E-37 7.4E-42 361.9 17.5 257 678-966 22-283 (484)
208 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-37 7.2E-42 360.6 17.2 256 681-965 184-449 (543)
209 2a19_B Interferon-induced, dou 100.0 9.9E-38 3.4E-42 338.3 13.4 250 680-972 9-275 (284)
210 2xrw_A Mitogen-activated prote 100.0 5.9E-37 2E-41 345.1 20.2 272 679-966 22-320 (371)
211 2rku_A Serine/threonine-protei 100.0 7.1E-37 2.4E-41 333.3 20.2 253 679-965 12-266 (294)
212 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-37 3.7E-42 367.2 14.7 257 681-971 266-523 (535)
213 2buj_A Serine/threonine-protei 100.0 9.3E-38 3.2E-42 344.4 13.2 264 682-971 29-306 (317)
214 2owb_A Serine/threonine-protei 100.0 7.6E-37 2.6E-41 339.4 20.4 253 679-965 38-292 (335)
215 3fme_A Dual specificity mitoge 100.0 1.9E-37 6.5E-42 337.2 15.1 256 681-965 6-267 (290)
216 1fvr_A Tyrosine-protein kinase 100.0 3.6E-37 1.2E-41 341.0 17.5 257 681-969 24-298 (327)
217 3i6u_A CDS1, serine/threonine- 100.0 1.6E-37 5.3E-42 355.1 14.9 257 678-965 131-400 (419)
218 1ua2_A CAK, cell division prot 100.0 7.6E-37 2.6E-41 341.0 19.7 275 679-966 7-293 (346)
219 3eqc_A Dual specificity mitoge 100.0 3.2E-37 1.1E-41 346.4 16.7 272 681-966 32-326 (360)
220 3n9x_A Phosphotransferase; mal 100.0 4.4E-37 1.5E-41 353.1 18.2 207 678-891 22-253 (432)
221 1byg_A CSK, protein (C-termina 100.0 2E-37 6.9E-42 334.7 14.4 252 681-971 20-273 (278)
222 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-36 4.5E-41 332.8 21.0 253 679-966 19-272 (303)
223 3uzp_A CKI-delta, CKID, casein 100.0 1.7E-36 5.7E-41 330.8 21.2 264 679-969 6-278 (296)
224 2vgo_A Serine/threonine-protei 100.0 7.3E-37 2.5E-41 331.4 18.1 249 681-965 13-263 (284)
225 2id5_A Lingo-1, leucine rich r 100.0 8.7E-37 3E-41 356.7 19.8 345 245-615 14-360 (477)
226 4hgt_A Casein kinase I isoform 100.0 1.5E-36 5E-41 331.2 20.3 263 680-969 7-278 (296)
227 2fst_X Mitogen-activated prote 100.0 1.1E-36 3.6E-41 341.5 19.5 270 678-965 25-312 (367)
228 2h6d_A 5'-AMP-activated protei 100.0 8.6E-37 2.9E-41 329.4 18.0 251 680-965 9-262 (276)
229 2jii_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 344.8 15.3 263 682-969 42-334 (352)
230 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.3E-37 7.7E-42 348.1 13.5 250 681-968 64-336 (365)
231 3g2f_A Bone morphogenetic prot 100.0 2.1E-37 7.2E-42 344.5 12.9 279 681-970 12-317 (336)
232 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-37 8.1E-42 346.0 13.4 258 681-967 53-324 (355)
233 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-36 4.2E-41 336.5 18.5 265 681-970 40-321 (326)
234 3nsz_A CK II alpha, casein kin 100.0 1.4E-36 4.9E-41 336.9 18.9 261 681-965 35-320 (330)
235 2wei_A Calmodulin-domain prote 100.0 9.6E-37 3.3E-41 331.0 16.9 256 678-965 18-277 (287)
236 3kvw_A DYRK2, dual specificity 100.0 3.4E-36 1.2E-40 344.9 22.2 201 678-893 93-302 (429)
237 1phk_A Phosphorylase kinase; g 100.0 1.5E-36 5E-41 331.6 18.3 257 678-965 13-284 (298)
238 4exu_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 339.0 21.3 269 678-965 38-324 (371)
239 2j7t_A Serine/threonine-protei 100.0 7.9E-37 2.7E-41 334.4 15.5 255 679-965 16-276 (302)
240 2vwi_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 336.8 13.1 267 681-965 14-288 (303)
241 3an0_A Dual specificity mitoge 100.0 8.7E-37 3E-41 340.0 15.9 256 680-965 49-311 (340)
242 3byv_A Rhoptry kinase; malaria 100.0 2.1E-37 7E-42 349.8 10.9 246 680-965 71-360 (377)
243 2wtk_C Serine/threonine-protei 100.0 3.7E-36 1.3E-40 329.6 20.5 256 680-966 3-265 (305)
244 3pfq_A PKC-B, PKC-beta, protei 100.0 8.4E-37 2.9E-41 368.0 16.7 251 681-965 340-598 (674)
245 3com_A Serine/threonine-protei 100.0 2.7E-36 9.1E-41 332.2 19.1 253 679-965 26-279 (314)
246 1u46_A ACK-1, activated CDC42 100.0 4.9E-37 1.7E-41 334.2 13.0 262 681-971 17-284 (291)
247 2ycf_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 338.5 14.0 256 679-965 7-275 (322)
248 3cek_A Dual specificity protei 100.0 1.4E-36 4.7E-41 334.2 16.6 255 681-966 27-294 (313)
249 3ll6_A Cyclin G-associated kin 100.0 1.2E-36 4.1E-41 338.6 16.2 257 682-970 28-307 (337)
250 3sv0_A Casein kinase I-like; t 100.0 1E-35 3.4E-40 343.5 24.0 264 679-969 4-276 (483)
251 1blx_A Cyclin-dependent kinase 100.0 2E-36 6.9E-41 335.1 17.5 274 680-965 9-297 (326)
252 2pml_X PFPK7, Ser/Thr protein 100.0 2E-36 6.9E-41 338.4 17.5 273 678-965 27-323 (348)
253 2x7f_A TRAF2 and NCK-interacti 100.0 1.6E-36 5.5E-41 335.8 16.3 260 673-965 14-287 (326)
254 1z57_A Dual specificity protei 100.0 4.1E-36 1.4E-40 334.5 19.6 271 678-965 10-329 (339)
255 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.2E-37 1.4E-41 339.4 11.2 261 680-970 31-301 (319)
256 4e7w_A Glycogen synthase kinas 100.0 2.1E-36 7.3E-41 342.9 17.3 269 680-965 38-322 (394)
257 3eb0_A Putative uncharacterize 100.0 6.7E-36 2.3E-40 338.2 21.0 269 680-965 5-322 (383)
258 3q60_A ROP5B; pseudokinase, tr 100.0 5.6E-37 1.9E-41 345.6 12.0 255 682-965 62-353 (371)
259 3coi_A Mitogen-activated prote 100.0 5.4E-36 1.8E-40 335.4 19.7 269 678-965 20-306 (353)
260 2rio_A Serine/threonine-protei 100.0 2.8E-36 9.7E-41 346.3 17.8 259 679-965 12-296 (434)
261 3qyz_A Mitogen-activated prote 100.0 1.3E-35 4.3E-40 333.6 22.3 276 679-966 24-315 (364)
262 3pg1_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 338.5 17.4 275 678-965 18-317 (362)
263 3o6n_A APL1; leucine-rich repe 100.0 8.8E-36 3E-40 338.5 20.8 351 48-472 3-354 (390)
264 2vx3_A Dual specificity tyrosi 100.0 2.3E-35 7.7E-40 333.7 22.6 273 678-965 50-373 (382)
265 1j1b_A Glycogen synthase kinas 100.0 8.3E-36 2.8E-40 340.9 18.8 269 682-966 54-338 (420)
266 1zy4_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 329.6 14.3 255 681-965 5-284 (303)
267 2j0j_A Focal adhesion kinase 1 100.0 7.9E-36 2.7E-40 358.4 18.6 256 681-969 389-649 (656)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 7.9E-36 2.7E-40 334.2 17.3 276 679-965 8-306 (353)
269 2i6l_A Mitogen-activated prote 100.0 1.3E-35 4.6E-40 327.5 18.8 275 678-965 7-306 (320)
270 1wak_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40 338.4 18.8 273 679-965 34-392 (397)
271 3e3p_A Protein kinase, putativ 100.0 5.1E-36 1.7E-40 336.8 14.9 274 678-965 19-315 (360)
272 2dyl_A Dual specificity mitoge 100.0 1.8E-35 6.1E-40 326.2 18.4 254 681-965 24-284 (318)
273 3oja_B Anopheles plasmodium-re 100.0 3.1E-35 1E-39 352.5 21.4 353 43-472 4-360 (597)
274 2eu9_A Dual specificity protei 100.0 2.1E-35 7.1E-40 331.1 18.4 270 679-965 16-334 (355)
275 3rgf_A Cyclin-dependent kinase 100.0 4.7E-36 1.6E-40 342.2 12.8 277 680-966 18-335 (405)
276 3qa8_A MGC80376 protein; kinas 100.0 2.9E-36 9.9E-41 354.4 10.6 271 679-962 11-295 (676)
277 3o6n_A APL1; leucine-rich repe 100.0 5.1E-35 1.7E-39 332.2 20.5 335 240-616 43-379 (390)
278 3fhr_A MAP kinase-activated pr 100.0 2.7E-35 9.2E-40 326.8 16.9 255 678-966 24-289 (336)
279 3aln_A Dual specificity mitoge 100.0 5.7E-36 2E-40 331.5 11.3 258 681-965 21-286 (327)
280 3oja_B Anopheles plasmodium-re 100.0 7.1E-35 2.4E-39 349.3 20.6 335 240-616 49-385 (597)
281 2iwi_A Serine/threonine-protei 100.0 1.5E-35 5.2E-40 325.8 12.9 247 678-966 27-285 (312)
282 3a99_A Proto-oncogene serine/t 100.0 1.6E-35 5.3E-40 326.6 13.0 246 678-965 39-294 (320)
283 3p23_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 335.7 13.9 250 683-965 25-284 (432)
284 1q8y_A SR protein kinase; tran 100.0 1.1E-34 3.7E-39 327.7 17.2 268 681-965 18-334 (373)
285 4fcg_A Uncharacterized protein 100.0 6.7E-35 2.3E-39 321.7 14.1 272 25-303 24-314 (328)
286 4fmz_A Internalin; leucine ric 100.0 2.6E-33 8.8E-38 313.0 23.6 307 238-566 40-346 (347)
287 4fmz_A Internalin; leucine ric 100.0 1.5E-32 5.2E-37 306.7 26.9 64 477-542 283-346 (347)
288 1ogq_A PGIP-2, polygalacturona 100.0 4.9E-34 1.7E-38 313.0 14.1 244 314-584 51-299 (313)
289 3uqc_A Probable conserved tran 100.0 9.2E-34 3.2E-38 306.3 16.0 235 679-971 28-265 (286)
290 2pzi_A Probable serine/threoni 100.0 1.4E-33 4.8E-38 342.7 16.1 241 679-968 77-325 (681)
291 3m2w_A MAP kinase-activated pr 100.0 4.2E-33 1.4E-37 304.1 17.9 238 675-966 10-258 (299)
292 3dzo_A Rhoptry kinase domain; 100.0 1.7E-33 5.9E-38 320.9 13.5 245 681-965 77-364 (413)
293 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-31 3.8E-36 297.5 23.6 286 122-442 34-329 (332)
294 1xku_A Decorin; proteoglycan, 100.0 2.3E-31 7.9E-36 294.7 22.9 267 314-587 53-330 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-31 5.3E-36 296.3 21.5 288 243-563 34-330 (332)
296 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-35 4.7E-40 345.2 -14.2 135 145-304 3-156 (461)
297 2vuw_A Serine/threonine-protei 100.0 3.4E-33 1.2E-37 310.3 5.6 246 681-965 19-332 (336)
298 1xku_A Decorin; proteoglycan, 100.0 4.2E-31 1.4E-35 292.6 22.1 291 242-564 31-330 (330)
299 1z7x_W Ribonuclease inhibitor; 100.0 8.1E-35 2.8E-39 338.7 -14.3 379 192-590 2-441 (461)
300 3ogk_B Coronatine-insensitive 100.0 4.4E-33 1.5E-37 334.9 -6.2 307 240-568 190-528 (592)
301 3ogk_B Coronatine-insensitive 100.0 7.3E-33 2.5E-37 333.0 -10.2 483 59-594 41-580 (592)
302 2z66_A Variable lymphocyte rec 100.0 9.4E-30 3.2E-34 278.6 14.7 258 338-596 29-294 (306)
303 2z80_A TOLL-like receptor 2, v 100.0 1E-29 3.5E-34 284.3 14.4 275 293-570 34-318 (353)
304 2z80_A TOLL-like receptor 2, v 100.0 1.2E-29 4.1E-34 283.7 13.3 288 48-377 20-317 (353)
305 2z66_A Variable lymphocyte rec 100.0 2.1E-29 7.1E-34 275.9 13.9 267 314-581 29-302 (306)
306 3oja_A Leucine-rich immune mol 100.0 1.3E-31 4.4E-36 311.6 -6.0 233 314-584 35-270 (487)
307 4fcg_A Uncharacterized protein 100.0 3.5E-28 1.2E-32 268.0 17.5 231 314-588 82-313 (328)
308 3zyj_A Leucine-rich repeat-con 100.0 7.7E-28 2.7E-32 277.4 21.0 248 316-568 46-294 (440)
309 3zyi_A Leucine-rich repeat-con 100.0 7.1E-28 2.4E-32 278.7 20.7 230 337-568 75-305 (452)
310 1ozn_A Reticulon 4 receptor; N 100.0 2.9E-28 9.8E-33 263.8 16.1 236 337-596 32-268 (285)
311 1ozn_A Reticulon 4 receptor; N 100.0 4.9E-28 1.7E-32 262.0 16.7 209 386-594 33-243 (285)
312 1wwl_A Monocyte differentiatio 100.0 3.3E-29 1.1E-33 274.6 6.3 255 285-567 38-310 (312)
313 1wwl_A Monocyte differentiatio 100.0 2.9E-29 9.9E-34 275.1 5.7 249 333-591 39-311 (312)
314 3zyj_A Leucine-rich repeat-con 99.9 1.4E-27 4.7E-32 275.3 19.3 250 338-592 44-295 (440)
315 3g06_A SSPH2 (leucine-rich rep 99.9 4.4E-28 1.5E-32 287.2 15.3 291 42-379 6-302 (622)
316 3zyi_A Leucine-rich repeat-con 99.9 1.6E-27 5.5E-32 275.7 19.5 251 338-593 55-307 (452)
317 3o53_A Protein LRIM1, AGAP0063 99.9 3.9E-29 1.3E-33 274.8 3.7 266 291-594 11-281 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1.7E-26 5.7E-31 273.7 25.8 268 242-576 40-307 (622)
319 3o53_A Protein LRIM1, AGAP0063 99.9 6.6E-29 2.2E-33 272.9 4.3 269 97-404 11-282 (317)
320 2p1m_B Transport inhibitor res 99.9 8E-31 2.7E-35 315.4 -18.0 444 59-568 34-521 (594)
321 2o6q_A Variable lymphocyte rec 99.9 1E-25 3.4E-30 241.5 21.4 218 58-305 3-220 (270)
322 4azs_A Methyltransferase WBDD; 99.9 2.5E-27 8.4E-32 279.2 6.1 187 689-889 241-437 (569)
323 3oja_A Leucine-rich immune mol 99.9 3.9E-27 1.3E-31 273.9 6.8 237 119-393 32-270 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 2.8E-25 9.5E-30 239.1 18.7 225 318-570 12-241 (276)
325 2p1m_B Transport inhibitor res 99.9 3.3E-29 1.1E-33 301.3 -15.1 133 456-589 371-519 (594)
326 2z62_A TOLL-like receptor 4, v 99.9 3.7E-25 1.3E-29 238.1 17.8 214 88-305 22-239 (276)
327 3rfs_A Internalin B, repeat mo 99.9 6E-25 2.1E-29 235.6 13.9 203 385-597 41-243 (272)
328 2o6q_A Variable lymphocyte rec 99.9 1.2E-23 4E-28 225.4 19.4 206 338-570 17-222 (270)
329 3rfs_A Internalin B, repeat mo 99.9 7.8E-25 2.7E-29 234.7 9.9 225 315-576 21-245 (272)
330 2ast_B S-phase kinase-associat 99.9 5.4E-26 1.8E-30 252.4 -0.8 265 58-359 35-315 (336)
331 3en9_A Glycoprotease, O-sialog 99.9 9.8E-25 3.4E-29 255.6 9.1 190 685-891 339-539 (540)
332 3m19_A Variable lymphocyte rec 99.9 2.6E-23 8.8E-28 220.1 18.3 192 58-305 3-194 (251)
333 1p9a_G Platelet glycoprotein I 99.9 1.9E-23 6.6E-28 225.6 17.2 201 357-588 6-207 (290)
334 1p9a_G Platelet glycoprotein I 99.9 3.7E-23 1.3E-27 223.4 16.7 206 332-568 5-210 (290)
335 3goz_A Leucine-rich repeat-con 99.9 5.4E-25 1.8E-29 246.6 0.3 262 294-575 2-306 (362)
336 3goz_A Leucine-rich repeat-con 99.9 7.3E-25 2.5E-29 245.5 1.1 261 270-550 2-305 (362)
337 3m19_A Variable lymphocyte rec 99.9 1.4E-22 4.7E-27 214.5 18.2 201 389-592 18-224 (251)
338 4glp_A Monocyte differentiatio 99.9 1.8E-23 6.2E-28 228.8 11.8 232 310-567 61-308 (310)
339 2ca6_A RAN GTPase-activating p 99.9 1.6E-25 5.4E-30 253.5 -7.6 115 455-569 185-319 (386)
340 2xwt_C Thyrotropin receptor; s 99.9 1.4E-22 4.7E-27 212.9 13.9 154 404-563 75-236 (239)
341 2ca6_A RAN GTPase-activating p 99.9 8.2E-25 2.8E-29 247.6 -4.7 248 328-592 23-319 (386)
342 4glp_A Monocyte differentiatio 99.9 5E-23 1.7E-27 225.3 9.4 226 290-542 64-307 (310)
343 2xwt_C Thyrotropin receptor; s 99.9 2.5E-22 8.6E-27 210.9 13.7 195 386-586 32-236 (239)
344 2ast_B S-phase kinase-associat 99.9 9.7E-24 3.3E-28 234.1 0.9 251 315-597 49-314 (336)
345 1h6u_A Internalin H; cell adhe 99.9 2.9E-22 9.9E-27 218.6 12.5 207 319-567 25-231 (308)
346 1h6u_A Internalin H; cell adhe 99.9 5.8E-22 2E-26 216.3 12.8 213 290-543 19-231 (308)
347 4ay9_X Follicle-stimulating ho 99.9 1.5E-21 5.1E-26 217.4 15.1 240 293-563 12-256 (350)
348 2o6s_A Variable lymphocyte rec 99.9 3.7E-21 1.3E-25 197.3 16.4 175 59-242 6-189 (208)
349 3cvr_A Invasion plasmid antige 99.9 5.3E-22 1.8E-26 232.1 9.7 208 47-312 32-252 (571)
350 4ay9_X Follicle-stimulating ho 99.8 2.9E-21 9.9E-26 215.0 14.4 241 316-587 12-257 (350)
351 1zar_A RIO2 kinase; serine kin 99.8 1E-21 3.4E-26 210.7 8.9 147 683-864 91-253 (282)
352 3cvr_A Invasion plasmid antige 99.8 1.3E-20 4.3E-25 220.4 16.7 109 455-576 138-253 (571)
353 2o6s_A Variable lymphocyte rec 99.8 2.4E-20 8.2E-25 191.2 13.8 160 410-576 29-188 (208)
354 4b8c_D Glucose-repressible alc 99.8 4E-21 1.4E-25 233.4 5.9 239 26-323 130-369 (727)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 4.9E-19 1.7E-23 182.7 13.3 156 412-570 14-170 (220)
356 1m9s_A Internalin B; cell inva 99.8 2.5E-19 8.6E-24 212.0 11.8 191 338-568 22-212 (605)
357 1h6t_A Internalin B; cell adhe 99.8 2.9E-19 1E-23 193.0 10.9 170 119-303 44-213 (291)
358 1dce_A Protein (RAB geranylger 99.8 3.8E-21 1.3E-25 226.3 -4.2 203 334-570 346-550 (567)
359 1h6t_A Internalin B; cell adhe 99.8 2.1E-19 7E-24 194.2 9.5 151 405-567 64-214 (291)
360 2v9t_B SLIT homolog 2 protein 99.8 8.8E-19 3E-23 180.8 13.8 154 412-568 14-167 (220)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 6.6E-19 2.3E-23 181.7 12.7 155 436-593 14-170 (220)
362 1m9s_A Internalin B; cell inva 99.8 6.4E-19 2.2E-23 208.5 14.0 187 77-305 26-212 (605)
363 3e6j_A Variable lymphocyte rec 99.8 1.8E-18 6E-23 179.8 14.8 160 56-233 15-174 (229)
364 2xot_A Amphoterin-induced prot 99.8 8.2E-19 2.8E-23 196.0 13.1 177 388-567 21-203 (361)
365 1dce_A Protein (RAB geranylger 99.8 4.9E-21 1.7E-25 225.4 -5.3 203 358-594 346-551 (567)
366 2xot_A Amphoterin-induced prot 99.8 6E-19 2.1E-23 197.1 11.3 177 412-591 21-204 (361)
367 3e6j_A Variable lymphocyte rec 99.8 3.3E-18 1.1E-22 177.8 15.3 156 411-570 21-176 (229)
368 2v9t_B SLIT homolog 2 protein 99.8 1.7E-18 5.6E-23 178.8 12.9 153 436-591 14-167 (220)
369 1w8a_A SLIT protein; signaling 99.8 5E-18 1.7E-22 171.1 14.3 158 458-616 30-188 (192)
370 4b8c_D Glucose-repressible alc 99.7 4.4E-19 1.5E-23 215.5 5.1 196 337-563 173-369 (727)
371 1xeu_A Internalin C; cellular 99.7 2.7E-18 9.1E-23 182.4 8.6 127 405-542 59-185 (263)
372 4ezg_A Putative uncharacterize 99.7 7.2E-18 2.4E-22 170.9 10.4 154 405-566 40-194 (197)
373 1xeu_A Internalin C; cellular 99.7 6.7E-18 2.3E-22 179.3 9.0 171 383-568 17-187 (263)
374 1zth_A RIO1 serine protein kin 99.7 1.2E-17 3.9E-22 176.9 10.6 138 684-836 49-219 (258)
375 4ezg_A Putative uncharacterize 99.7 1.9E-17 6.3E-22 167.9 11.2 154 429-590 40-195 (197)
376 1w8a_A SLIT protein; signaling 99.7 1.5E-17 5.3E-22 167.5 8.3 154 460-616 11-167 (192)
377 3sb4_A Hypothetical leucine ri 99.7 1.6E-17 5.4E-22 183.1 5.0 221 336-559 100-327 (329)
378 3sb4_A Hypothetical leucine ri 99.6 2.7E-17 9.2E-22 181.3 3.6 282 120-463 24-327 (329)
379 2ell_A Acidic leucine-rich nuc 99.6 2.1E-16 7E-21 155.7 9.3 135 409-570 24-163 (168)
380 2ell_A Acidic leucine-rich nuc 99.6 1.1E-15 3.7E-20 150.5 11.5 137 384-547 23-164 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 1.2E-15 4E-20 153.6 11.5 128 436-567 13-140 (193)
382 2wfh_A SLIT homolog 2 protein 99.6 2.2E-15 7.5E-20 151.7 12.7 130 460-593 13-143 (193)
383 2je0_A Acidic leucine-rich nuc 99.6 5.1E-16 1.8E-20 149.5 7.7 110 450-561 35-148 (149)
384 2o6r_A Variable lymphocyte rec 99.6 2.8E-15 9.5E-20 149.0 12.5 114 457-570 28-141 (177)
385 2o6r_A Variable lymphocyte rec 99.6 2.7E-15 9.2E-20 149.1 11.1 132 459-593 9-141 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 1.9E-15 6.3E-20 145.5 9.1 129 408-538 16-149 (149)
387 4gyi_A RIO2 kinase; protein ki 99.6 3.3E-15 1.1E-19 163.5 10.1 136 684-835 97-264 (397)
388 4fdw_A Leucine rich hypothetic 99.6 1.8E-14 6.2E-19 162.0 16.2 264 266-565 113-382 (401)
389 4fs7_A Uncharacterized protein 99.6 8.7E-14 3E-18 157.2 21.5 333 111-534 61-393 (394)
390 4fdw_A Leucine rich hypothetic 99.6 5.9E-14 2E-18 157.7 18.8 249 235-518 129-383 (401)
391 1a9n_A U2A', U2A'; complex (nu 99.5 6.8E-15 2.3E-19 145.9 6.7 105 458-566 43-153 (176)
392 1a9n_A U2A', U2A'; complex (nu 99.5 1.1E-14 3.9E-19 144.3 8.2 133 451-589 13-153 (176)
393 1ds9_A Outer arm dynein; leuci 99.5 1.6E-16 5.4E-21 161.1 -5.9 115 452-571 43-158 (198)
394 1ds9_A Outer arm dynein; leuci 99.5 1.6E-16 5.4E-21 161.1 -6.8 161 382-567 15-186 (198)
395 4fs7_A Uncharacterized protein 99.5 8.5E-13 2.9E-17 149.1 21.1 315 233-563 62-376 (394)
396 3g39_A Variable lymphocyte rec 99.5 7.9E-14 2.7E-18 137.1 10.1 109 459-570 11-119 (170)
397 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 135.6 9.6 109 482-593 10-119 (170)
398 2r9u_A Variable lymphocyte rec 99.4 1.8E-13 6.1E-18 135.0 10.2 106 460-568 15-120 (174)
399 2r9u_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 132.9 9.8 107 483-592 14-121 (174)
400 4gt6_A Cell surface protein; l 99.3 1.6E-10 5.4E-15 130.4 22.7 87 450-541 304-390 (394)
401 3un9_A NLR family member X1; l 99.3 4.1E-14 1.4E-18 157.5 -6.8 166 410-575 73-261 (372)
402 2ifg_A High affinity nerve gro 99.3 4.8E-12 1.6E-16 140.4 9.8 131 461-594 12-146 (347)
403 2ifg_A High affinity nerve gro 99.3 6E-12 2E-16 139.6 8.7 108 484-593 11-120 (347)
404 3un9_A NLR family member X1; l 99.2 1.3E-13 4.5E-18 153.4 -5.4 109 242-350 155-283 (372)
405 4gt6_A Cell surface protein; l 99.2 2.6E-10 8.8E-15 128.6 21.3 136 424-566 256-391 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.3E-15 122.0 10.2 143 681-834 13-212 (263)
407 4h09_A Hypothetical leucine ri 99.0 1.1E-08 3.9E-13 114.5 20.7 302 238-563 42-343 (379)
408 3rw6_A Nuclear RNA export fact 99.0 1.4E-11 4.8E-16 128.5 -3.0 175 28-206 35-233 (267)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 4E-10 1.4E-14 119.3 8.1 136 683-834 21-213 (264)
410 4h09_A Hypothetical leucine ri 98.9 3.6E-08 1.2E-12 110.4 19.4 295 235-553 62-356 (379)
411 2ra8_A Uncharacterized protein 98.9 5.7E-10 1.9E-14 122.9 4.0 180 405-587 135-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 6.9E-09 2.4E-13 115.3 11.5 143 686-835 42-248 (359)
413 2ra8_A Uncharacterized protein 98.8 1E-09 3.5E-14 120.8 3.3 136 408-564 192-341 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 2E-08 6.9E-13 108.7 8.1 189 687-890 25-287 (304)
415 3rw6_A Nuclear RNA export fact 98.4 2.3E-08 7.8E-13 104.2 -0.0 65 504-570 169-237 (267)
416 3r70_A Aminoglycoside phosphot 98.4 8.7E-07 3E-11 96.4 11.5 136 683-835 38-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 3.6E-08 1.2E-12 97.8 -0.3 113 454-566 33-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.4 1E-08 3.5E-13 101.8 -4.4 118 89-206 29-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 4.5E-06 1.6E-10 88.4 12.3 134 689-834 31-222 (272)
420 3d1u_A Putative fructosamine-3 98.2 3.8E-06 1.3E-10 89.5 10.6 76 686-767 19-97 (288)
421 3tdw_A Gentamicin resistance p 98.2 1.1E-05 3.9E-10 86.8 12.9 136 687-835 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 2E-05 6.7E-10 87.0 10.5 75 686-768 45-122 (362)
423 3ats_A Putative uncharacterize 97.9 1.6E-05 5.4E-10 87.9 7.2 83 687-769 25-122 (357)
424 3jr1_A Putative fructosamine-3 97.7 0.00018 6.1E-09 77.1 11.2 139 686-831 40-232 (312)
425 2q83_A YTAA protein; 2635576, 97.6 5.7E-05 1.9E-09 82.9 7.5 141 687-834 37-251 (346)
426 2olc_A MTR kinase, methylthior 97.6 0.00011 3.7E-09 82.4 9.2 77 687-765 35-120 (397)
427 3e4g_A ATP synthase subunit S, 97.5 1.8E-05 6.3E-10 76.1 0.5 83 482-564 62-150 (176)
428 3e4g_A ATP synthase subunit S, 97.4 5.4E-05 1.8E-09 72.9 3.3 82 267-348 62-150 (176)
429 3f7w_A Putative fructosamine-3 97.4 0.00021 7E-09 76.2 7.9 76 685-766 18-96 (288)
430 2pyw_A Uncharacterized protein 97.2 0.0013 4.5E-08 74.1 11.7 76 805-886 232-312 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.1 0.0001 3.6E-09 72.3 0.8 110 456-565 40-169 (197)
432 3csv_A Aminoglycoside phosphot 96.9 0.0018 6.1E-08 70.4 8.9 141 688-835 24-217 (333)
433 1zyl_A Hypothetical protein YI 96.8 0.0038 1.3E-07 67.6 10.1 141 688-834 32-222 (328)
434 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00026 9E-09 69.4 0.7 66 238-303 37-111 (197)
435 3dxq_A Choline/ethanolamine ki 96.8 0.0014 4.8E-08 70.1 6.5 73 685-767 21-95 (301)
436 3feg_A Choline/ethanolamine ki 96.7 0.0031 1.1E-07 69.4 8.8 141 687-834 55-253 (379)
437 1nw1_A Choline kinase (49.2 KD 96.7 0.0028 9.5E-08 71.4 8.4 73 687-767 78-159 (429)
438 3rfe_A Platelet glycoprotein I 96.7 0.0018 6.1E-08 59.3 5.5 57 509-567 12-69 (130)
439 2ppq_A HSK, HK, homoserine kin 96.6 0.0023 8E-08 69.1 6.7 143 687-834 27-216 (322)
440 3rfe_A Platelet glycoprotein I 96.4 0.003 1E-07 57.7 5.3 56 485-542 12-68 (130)
441 2qg7_A Ethanolamine kinase PV0 96.3 0.014 4.9E-07 65.8 11.1 74 687-767 113-188 (458)
442 3c5i_A Choline kinase; choline 96.3 0.0046 1.6E-07 68.2 6.9 74 687-767 38-121 (369)
443 3i1a_A Spectinomycin phosphotr 95.8 0.034 1.2E-06 60.3 10.8 31 805-835 206-236 (339)
444 2yle_A Protein spire homolog 1 94.9 0.056 1.9E-06 53.1 7.6 105 766-892 34-138 (229)
445 3f2s_A CK, chetk-alpha, cholin 94.9 0.045 1.5E-06 60.3 7.8 143 688-834 58-279 (401)
446 3mes_A Choline kinase; malaria 93.9 0.072 2.5E-06 59.3 6.8 73 688-767 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.3 0.6 2.1E-05 51.6 8.7 29 806-834 245-279 (401)
448 4ann_A ESSB; membrane protein, 86.4 2 6.8E-05 42.2 8.3 115 738-891 43-158 (215)
449 4ano_A ESSB; membrane protein, 84.6 3 0.0001 41.1 8.6 84 738-834 48-132 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 76.5 0.3 1E-05 55.1 -1.9 62 686-750 146-214 (463)
451 2ks1_B Epidermal growth factor 60.5 6.9 0.00023 27.4 2.9 18 634-651 17-34 (44)
452 2l2t_A Receptor tyrosine-prote 41.3 17 0.00057 25.4 2.4 13 638-650 20-32 (44)
453 2k1k_A Ephrin type-A receptor 37.5 15 0.00052 24.8 1.6 11 642-652 26-36 (38)
454 1cja_A Protein (actin-fragmin 35.2 1.1E+02 0.0039 31.9 8.6 136 687-835 74-237 (342)
455 1kdl_A YOPD protein; yersinia, 30.5 28 0.00096 20.7 1.7 15 959-973 4-18 (26)
456 2lz0_A Uncharacterized protein 29.3 56 0.0019 27.4 4.4 45 157-202 8-52 (100)
457 3ls8_A Phosphatidylinositol 3- 25.7 3.1E+02 0.01 31.4 10.8 46 782-834 454-501 (614)
458 2lz0_A Uncharacterized protein 23.3 88 0.003 26.2 4.5 45 254-299 8-52 (100)
459 3ox7_P MH027; urokinase-type p 21.0 30 0.001 19.3 0.7 9 58-66 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.2e-82 Score=779.71 Aligned_cols=590 Identities=34% Similarity=0.550 Sum_probs=481.0
Q ss_pred hccchhhHHHHHHHhhhccCCCCCccCCccCCCCCCCCccceeEEcCCCCceeEeecCCCccCCC---CC----------
Q 039922 23 AISLHGDAEILIRVKSDQLDDPNRKLGDWVRTSQQSPCNWTGITCETQNQSVDGIDLSGFDLSGG---FP---------- 89 (973)
Q Consensus 23 ~~~~~~~~~~l~~~k~~~~~d~~~~~~sw~~~~~~~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~---------- 89 (973)
+.+.+.|++||++||+++. ||. .++||.. +.+||.|+||+|+ +++|+.|+|++.++.|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~-~~~-~l~~W~~--~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLP-DKN-LLPDWSS--NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT--TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred ccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC--CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3446789999999999985 888 9999963 5689999999998 57999999999998886 33
Q ss_pred -------------CCccCccccceeccCCCcccCcCCc-CcCCCcCCccEEecccccccccCCccc-cCCCCCCEEECc-
Q 039922 90 -------------NGFCRIRTLRNLNLSDNYFNGTLSS-QSLSPCFHLQVLALDYNVFIGELPDFS-REFANLQVLDLS- 153 (973)
Q Consensus 90 -------------~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~l~~L~~L~L~~n~~~~~~~~~~-~~l~~L~~L~Ls- 153 (973)
+.|+++++|++|||++|.+.|.+|. ..++.+++|++|+|++|.+.+.+|..+ ..+++|++|||+
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 5778888999999999988877664 257777777777777777766655443 334444444444
Q ss_pred ------------------------------------------------CCcCCCCCCcccCCCCcccEEecCCcccCCcc
Q 039922 154 ------------------------------------------------RNNFSGDIPESFGRFPVLKVLNLGGNLLSGLI 185 (973)
Q Consensus 154 ------------------------------------------------~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 185 (973)
+|.+++.+|. ++++++|++|+|++|++++.+
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 4444433333 555555555555555555555
Q ss_pred cccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCC-CCCCEEEccCCcccccCCcCCCC
Q 039922 186 PSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKL-AFLSNLDLSDNFLSGKIPHSFSG 264 (973)
Q Consensus 186 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~ 264 (973)
|..|+++++|++|+|++|.+... +|.. .+++|++|++++|.+.+.+|..+..+ ++|++|+|++|.+++.+|..|++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~-~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~ 316 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGP-IPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEES-CCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGG
T ss_pred cHHHhcCCCCCEEECCCCcccCc-cCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhc
Confidence 55555555555555555555431 2222 55666666666666666777777664 77888888888887777777888
Q ss_pred CCCCCEEEccCCcCcccCchh-ccCCCccceeeccccccCCCChhhhhcc--cCcEEEccCCcCCCCCCccccC--CCcc
Q 039922 265 LASIEQIELFDNQLSGELPES-LSNLTTLLRLDISQNNLTGNLPETIAAM--SLESLNLNDNYFTGEIPESLAS--NPNL 339 (973)
Q Consensus 265 l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~--~L~~L~L~~N~l~~~~p~~~~~--l~~L 339 (973)
+++|++|++++|+++|.+|.. +.++++|++|++++|++++.+|..+... +|+.|++++|++++.+|..+.. +++|
T Consensus 317 l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 396 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396 (768)
T ss_dssp CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCC
T ss_pred CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCc
Confidence 888888888888887777765 7778888888888888877777766543 6888888888888777777766 7889
Q ss_pred ceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCC
Q 039922 340 VQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGN 419 (973)
Q Consensus 340 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 419 (973)
++|++++|++++.+|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|++|++++|
T Consensus 397 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 476 (768)
T 3rgz_A 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476 (768)
T ss_dssp CEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCC
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCcc
Q 039922 420 ELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPT 499 (973)
Q Consensus 420 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 499 (973)
++++..|..+.++++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..++.+++|++|++++|+++|.+|.
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred ccc----------------------------------------------------------------------cccccce
Q 039922 500 CIT----------------------------------------------------------------------QLNKLQQ 509 (973)
Q Consensus 500 ~~~----------------------------------------------------------------------~l~~L~~ 509 (973)
++. .+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 543 3577999
Q ss_pred eeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcC
Q 039922 510 LELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKL 588 (973)
Q Consensus 510 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l 588 (973)
|||++|+++|.+|.+++++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.||..+..+ .|+.|++++|+|
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred cccCCCCC-cccccccccCCCCCCCCCCCCCCCCCCCC
Q 039922 589 YGEVPSDF-DHDLFISSLLDNPGLCSPDLKPLPPCSKT 625 (973)
Q Consensus 589 ~g~~p~~~-~~~~~~~~~~~n~~~c~~~l~~~~~c~~~ 625 (973)
+|.||.+. ...+...+|.|||++||+|++ +|...
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~---~C~~~ 751 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLCGYPLP---RCDPS 751 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEESTTSC---CCCSC
T ss_pred cccCCCchhhccCCHHHhcCCchhcCCCCc---CCCCC
Confidence 99999864 345777889999999998764 78653
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.3e-65 Score=630.35 Aligned_cols=514 Identities=31% Similarity=0.501 Sum_probs=464.1
Q ss_pred ceeEeecCCCccCCCCCCCc-cCccccceeccCCCcccCcCCcC------------------------cCCCcCCccEEe
Q 039922 73 SVDGIDLSGFDLSGGFPNGF-CRIRTLRNLNLSDNYFNGTLSSQ------------------------SLSPCFHLQVLA 127 (973)
Q Consensus 73 ~v~~l~l~~~~l~g~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~------------------------~l~~l~~L~~L~ 127 (973)
+...|+|+++.+.+.+|..+ .++++|++|||++|++++..+.. .+..+++|++|+
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~ 206 (768)
T 3rgz_A 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLD 206 (768)
T ss_dssp TCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEE
T ss_pred CCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEE
Confidence 46778888888877777654 56666666666666665433211 236788889999
Q ss_pred cccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCC
Q 039922 128 LDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKS 207 (973)
Q Consensus 128 L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 207 (973)
|++|.+.+.+|. ++.+++|++|+|++|.+++.+|..++.+++|++|+|++|++++.+|.. .+++|++|+|++|+++.
T Consensus 207 Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~ 283 (768)
T 3rgz_A 207 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG 283 (768)
T ss_dssp CCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEE
T ss_pred CcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCC
Confidence 999998888887 999999999999999999999999999999999999999999888775 89999999999999874
Q ss_pred CCCCccccCc-chhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcC-CCCCCCCCEEEccCCcCcccCchh
Q 039922 208 SPLPSSVGNL-SKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHS-FSGLASIEQIELFDNQLSGELPES 285 (973)
Q Consensus 208 ~~~~~~~~~l-~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~ 285 (973)
.+|..+..+ ++|++|++++|++.+.+|..++++++|++|+|++|.+++.+|.. |.++++|++|++++|++++.+|..
T Consensus 284 -~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 284 -EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp -SCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred -ccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 367777765 99999999999999999999999999999999999999888876 999999999999999999999999
Q ss_pred ccCCC-ccceeeccccccCCCChhhhhc---ccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCC
Q 039922 286 LSNLT-TLLRLDISQNNLTGNLPETIAA---MSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYS 361 (973)
Q Consensus 286 l~~l~-~L~~L~Ls~N~l~~~~~~~~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 361 (973)
+.+++ +|+.|++++|++++.+|..+.. .+|++|++++|++++.+|..+.++++|++|+|++|++++.+|..++.++
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 442 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC
Confidence 99987 9999999999999888777654 3799999999999999999999999999999999999999999999999
Q ss_pred CccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEee
Q 039922 362 NLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMY 441 (973)
Q Consensus 362 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 441 (973)
+|++|++++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|++|++++|++++.+|.+|+.+++|+.|+++
T Consensus 443 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 522 (768)
T 3rgz_A 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhh-------------------------------------------
Q 039922 442 NNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQIC------------------------------------------- 478 (973)
Q Consensus 442 ~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~------------------------------------------- 478 (973)
+|++++.+|..+..+++|+.|++++|+++|.+|..+.
T Consensus 523 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (768)
T 3rgz_A 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602 (768)
T ss_dssp SSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGG
T ss_pred CCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccch
Confidence 9999999999999999999999999999988886543
Q ss_pred ---------------------------cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccc
Q 039922 479 ---------------------------TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTAL 531 (973)
Q Consensus 479 ---------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (973)
.+++|++|||++|+++|.+|.+++++++|+.|+|++|+++|.+|..++++++|
T Consensus 603 ~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L 682 (768)
T 3rgz_A 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682 (768)
T ss_dssp GGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC
Confidence 35679999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcccccceeccCCc-Ccc
Q 039922 532 IVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHNK-LYG 590 (973)
Q Consensus 532 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N~-l~g 590 (973)
+.||||+|+++|.+|..+.++++|++|||++|+|+|.||..-.-..+....+.+|. |+|
T Consensus 683 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 683 NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp CEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcC
Confidence 99999999999999999999999999999999999999976332266677777885 555
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.5e-59 Score=574.87 Aligned_cols=543 Identities=21% Similarity=0.219 Sum_probs=475.7
Q ss_pred CceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEE
Q 039922 72 QSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLD 151 (973)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 151 (973)
.+++.|+|+++.+++..+..|.++++|++|+|++|.+++ +++.+|+++++|++|+|++|.+.+..+..|+.+++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK-LEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCC-CCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCc-cCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 468999999999999888889999999999999999985 5557899999999999999999977777899999999999
Q ss_pred CcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccc--cCcchhHHHhhccCc
Q 039922 152 LSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSV--GNLSKLENLWAAKAN 229 (973)
Q Consensus 152 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~~l~~L~~L~l~~n~ 229 (973)
|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.++..+ +..+ ..+++|++|++++|.
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK-SEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC-HHHHGGGTTCEESEEECTTCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC-HHHhhccccccccEEECCCCc
Confidence 9999999888889999999999999999999999999999999999999999997642 3333 356899999999999
Q ss_pred ccccCCccccCC---------------------------CCCCEEEccCCcccccCCcCCCCCCC--CCEEEccCCcCcc
Q 039922 230 LIGEIPDSIGKL---------------------------AFLSNLDLSDNFLSGKIPHSFSGLAS--IEQIELFDNQLSG 280 (973)
Q Consensus 230 l~~~~p~~l~~l---------------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~n~l~~ 280 (973)
+.+..|..++.+ ++|+.|++++|.+++..|..|.+++. |++|++++|++++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 998888776654 56788889999999888999988865 9999999999998
Q ss_pred cCchhccCCCccceeeccccccCCCChhhhhcc-cCcEEEccCCcCCC-----CCCc----cccCCCccceeeecccccc
Q 039922 281 ELPESLSNLTTLLRLDISQNNLTGNLPETIAAM-SLESLNLNDNYFTG-----EIPE----SLASNPNLVQLKLFNNSFS 350 (973)
Q Consensus 281 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~ 350 (973)
..|..+..+++|+.|++++|++++..|..+... +|+.|++++|...+ .+|. .|..+++|++|++++|+++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 888999999999999999999998888777665 79999999887654 2333 6788999999999999999
Q ss_pred CCCCCCccCCCCccceeeecccccc--cCCcccccc--CCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccC
Q 039922 351 GKLPDDLGKYSNLEYFDVSTNDFTG--ELPRFLCFR--NKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELP 426 (973)
Q Consensus 351 ~~~p~~l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 426 (973)
+..+..|..+++|++|++++|.+.. .....+..+ ++|+.|++++|++.+..|..+..+++|++|++++|.+.+.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 9888899999999999999998643 223334333 589999999999999999999999999999999999987665
Q ss_pred -cccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCC--CCCchhhhcCCcCcEEeCcCCcccCCCcccccc
Q 039922 427 -SKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFT--GEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQ 503 (973)
Q Consensus 427 -~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 503 (973)
..|.++++|+.|++++|++.+..+..+..+++|+.|++++|.+. +.+|..+..+++|++|+|++|++++..|..|.+
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 502 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG 502 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc
Confidence 78999999999999999999999999999999999999999987 578999999999999999999999888888999
Q ss_pred ccccceeeccccccccccC--------cccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhc
Q 039922 504 LNKLQQLELQENMFTGELP--------RNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTK 575 (973)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 575 (973)
+++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|+.|||++|++++..|..+..
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 582 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNN 582 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCC
Confidence 9999999999999996532 34789999999999999999544457999999999999999999655555677
Q ss_pred c-cccceeccCCcCcccCCCCCc---ccccccccCCCCCCCCCCC
Q 039922 576 L-KLNQFNISHNKLYGEVPSDFD---HDLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 576 l-~l~~l~l~~N~l~g~~p~~~~---~~~~~~~~~~n~~~c~~~l 616 (973)
+ .|+.|++++|++++..|..+. .......+.+||+.|+++.
T Consensus 583 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 583 QVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 7 999999999999998776543 3456677899999999864
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.1e-57 Score=551.02 Aligned_cols=526 Identities=21% Similarity=0.195 Sum_probs=435.9
Q ss_pred CCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCC
Q 039922 80 SGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSG 159 (973)
Q Consensus 80 ~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 159 (973)
++.+++ .+|..+. +++++|||++|+++ .+++.+|.++++|++|+|++|.+.+..|..|+.+++|++|+|++|++++
T Consensus 20 ~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 95 (606)
T 3t6q_A 20 ENLGLN-EIPGTLP--NSTECLEFSFNVLP-TIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF 95 (606)
T ss_dssp TTSCCS-SCCTTSC--TTCCEEECTTCCCS-EECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE
T ss_pred CCCCcc-cCcCCCC--CcCcEEEccCCccC-cCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc
Confidence 333443 3455444 36899999999998 5666789999999999999999999999999999999999999999998
Q ss_pred CCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCcccc
Q 039922 160 DIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIG 239 (973)
Q Consensus 160 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~ 239 (973)
..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++.++.|..++ +++|++|++++|.+.+..|..++
T Consensus 96 ~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~ 174 (606)
T 3t6q_A 96 MAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLKVLDFQNNAIHYLSKEDMS 174 (606)
T ss_dssp ECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCCEEECCSSCCCEECHHHHH
T ss_pred cChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccCEEEcccCcccccChhhhh
Confidence 88999999999999999999999888889999999999999999999876666665 99999999999999999899999
Q ss_pred CCCCCC--EEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccC-----CCChhhhh-
Q 039922 240 KLAFLS--NLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLT-----GNLPETIA- 311 (973)
Q Consensus 240 ~l~~L~--~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-----~~~~~~~~- 311 (973)
.+++|+ .|++++|.+++..|..|.. .+|++|++++|.. .+..+..+.++....+..+.+. ...+..+.
T Consensus 175 ~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~---~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 175 SLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN---LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp TTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC---HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhcccceeEEecCCCccCccChhHhhh-ccccccccCCchh---HHHHhhhccccchhheechhhccccccccChhHhch
Confidence 999999 8999999999888877765 6899999999872 3444555554444333322221 12222222
Q ss_pred --cccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchh
Q 039922 312 --AMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQC 389 (973)
Q Consensus 312 --~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 389 (973)
..+|+.|++++|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 236888999999998888888888899999999999888 77888888899999999999988888888888899999
Q ss_pred hhcccCccCCCCCC-ccCCcceeeEEEccCCcccccc--CcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecC
Q 039922 390 IIIFNNRFSGKIPE-SYGECKTLNYLRFGGNELQGEL--PSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILING 466 (973)
Q Consensus 390 L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~ 466 (973)
|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|++.+..+..+..+++|+.|++++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 99999988866654 4888889999999999988776 77888889999999999998888888888889999999999
Q ss_pred CcCCCCCchh-hhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccc---cCcccCccccceeeeeccCccc
Q 039922 467 NNFTGEVPSQ-ICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGE---LPRNLNSLTALIVLNLSTNQLT 542 (973)
Q Consensus 467 N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~ 542 (973)
|.+++..|.. +..+++|++|++++|.+++..|..++.+++|++|+|++|++++. .+..+..+++|+.|+|++|+++
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 489 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS 489 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCC
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccC
Confidence 9888776544 78888999999999999888888888889999999999988863 3366888899999999999998
Q ss_pred CCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCCCCCc--ccccccccCCCCCCCCCCC
Q 039922 543 GTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFD--HDLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 543 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~--~~~~~~~~~~n~~~c~~~l 616 (973)
+..|..|..+++|+.|+|++|++++.+|..+..+ .| .|++++|++++.+|..+. .......+.+||+.|.++.
T Consensus 490 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 490 SIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 8888888889999999999999998888888888 78 899999999887776543 2355667888888887754
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8e-57 Score=550.80 Aligned_cols=521 Identities=21% Similarity=0.223 Sum_probs=463.6
Q ss_pred CceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEE
Q 039922 72 QSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLD 151 (973)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 151 (973)
.+++.|+|+++.+++..|.+|.++++|++|+|++|+++ .++...|+++++|++|+|++|.+.+..|..|+.+++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 35889999999999999999999999999999999998 67878899999999999999999988889999999999999
Q ss_pred CcCCcCCCCCCcccCCCCcccEEecCCcccCCccccccc--ccccccEeeccCcCCCCCCCCccccCc------------
Q 039922 152 LSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLG--NLTELTHFELGYNPLKSSPLPSSVGNL------------ 217 (973)
Q Consensus 152 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~~l------------ 217 (973)
|++|.+++..|..++++++|++|+|++|++++..+..+. .+++|++|++++|.++..+ |..+..+
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~~~ 206 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFS-PGCFHAIGRLFGLFLNNVQ 206 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBC-TTGGGGSSEECEEECTTCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccC-hhhhhhhhhhhhhhccccc
Confidence 999999999999999999999999999999988887765 4589999999999997653 4444443
Q ss_pred ---------------chhHHHhhccCcccccCCccccCCCC--CCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcc
Q 039922 218 ---------------SKLENLWAAKANLIGEIPDSIGKLAF--LSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSG 280 (973)
Q Consensus 218 ---------------~~L~~L~l~~n~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 280 (973)
++|++|++++|.+.+..|..+.+++. |++|+|++|++++..|..|+.+++|++|++++|++++
T Consensus 207 l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (680)
T 1ziw_A 207 LGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH 286 (680)
T ss_dssp CHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSE
T ss_pred cChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCc
Confidence 45777888889999999999988865 9999999999999999999999999999999999999
Q ss_pred cCchhccCCCccceeeccccccCCC-----Chh----hhhc-ccCcEEEccCCcCCCCCCccccCCCccceeeecccccc
Q 039922 281 ELPESLSNLTTLLRLDISQNNLTGN-----LPE----TIAA-MSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFS 350 (973)
Q Consensus 281 ~~p~~l~~l~~L~~L~Ls~N~l~~~-----~~~----~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (973)
..|..+.++++|+.|++++|...+. +|. .+.. .+|++|++++|++++..+..|..+++|++|++++|.++
T Consensus 287 ~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~ 366 (680)
T 1ziw_A 287 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 366 (680)
T ss_dssp ECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSC
T ss_pred cChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchh
Confidence 9999999999999999998876542 222 3333 47999999999999999999999999999999999865
Q ss_pred CCC--CCCccCC--CCccceeeecccccccCCccccccCCchhhhcccCccCCCCC-CccCCcceeeEEEccCCcccccc
Q 039922 351 GKL--PDDLGKY--SNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIP-ESYGECKTLNYLRFGGNELQGEL 425 (973)
Q Consensus 351 ~~~--p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 425 (973)
+.. ...+..+ ++|+.|++++|++++..|..+..+++|+.|++++|++.+.+| ..+..+++|++|++++|++.+..
T Consensus 367 ~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 446 (680)
T 1ziw_A 367 LRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLT 446 (680)
T ss_dssp CCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECC
T ss_pred hhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeC
Confidence 432 2234333 689999999999999999999999999999999999987665 78999999999999999999999
Q ss_pred CcccCCCCCccEEEeecCccc--CCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCC------
Q 039922 426 PSKFWGLPEVDFFEMYNNRFE--GSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHL------ 497 (973)
Q Consensus 426 ~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------ 497 (973)
+..|..+++|+.|++++|++. +.+|..+..+++|+.|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 447 ~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 526 (680)
T 1ziw_A 447 RNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPG 526 (680)
T ss_dssp TTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTT
T ss_pred hhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccC
Confidence 999999999999999999987 577899999999999999999999888888999999999999999998542
Q ss_pred --ccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhh-
Q 039922 498 --PTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELT- 574 (973)
Q Consensus 498 --p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~- 574 (973)
+..|.++++|+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..|..+.
T Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 606 (680)
T 1ziw_A 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606 (680)
T ss_dssp SCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH
T ss_pred CcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc
Confidence 23478999999999999999955556799999999999999999977777789999999999999999987777776
Q ss_pred cc-cccceeccCCcCcccCCC
Q 039922 575 KL-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 575 ~l-~l~~l~l~~N~l~g~~p~ 594 (973)
.+ .|+.+++++|++.+..+.
T Consensus 607 ~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 607 AFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHTTCSEEECTTCCCCBCCCC
T ss_pred cccccCEEEccCCCcccCCcc
Confidence 55 899999999999998774
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.4e-57 Score=544.83 Aligned_cols=525 Identities=20% Similarity=0.191 Sum_probs=445.9
Q ss_pred eecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCc
Q 039922 77 IDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNN 156 (973)
Q Consensus 77 l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~ 156 (973)
++.++.+++. +|..+. ++|++|+|++|+++ .+++..|.++++|++|+|++|.+.+..|..|+.+++|++|+|++|.
T Consensus 16 ~~c~~~~l~~-ip~~~~--~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 16 YQCMDQKLSK-VPDDIP--SSTKNIDLSFNPLK-ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EECTTSCCSS-CCTTSC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEccCCCccc-CCCCCC--CCcCEEECCCCCcC-EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 5566666653 555444 78999999999998 5666789999999999999999999899999999999999999999
Q ss_pred CCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCc
Q 039922 157 FSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPD 236 (973)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~ 236 (973)
+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.++.+.+|..++++++|++|++++|++.+..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 99888999999999999999999999888889999999999999999999878899999999999999999999999888
Q ss_pred cccCCCCCC----EEEccCCcccccCCcCCCCCCCCCEEEccCCcCc-ccCchhccCCCccceeeccccccCC------C
Q 039922 237 SIGKLAFLS----NLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLS-GELPESLSNLTTLLRLDISQNNLTG------N 305 (973)
Q Consensus 237 ~l~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~------~ 305 (973)
.++.+.+|+ +|++++|.+++..+..+... +|++|++++|.++ +..|..+.+++.|+.+++..+.+.+ .
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 888877765 89999999997777777665 8999999999987 5678889999999999887665432 1
Q ss_pred Chh---hhhcccCcEEEc-cCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccc
Q 039922 306 LPE---TIAAMSLESLNL-NDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFL 381 (973)
Q Consensus 306 ~~~---~~~~~~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 381 (973)
.+. .+...+++.+++ ..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|++ +.+|..
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~~- 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPTL- 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCCC-
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccccC-
Confidence 112 222336778888 77888888777 888899999999999987 556 788889999999999999 577744
Q ss_pred cccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCcccccc--CcccCCCCCccEEEeecCcccCCCCCCCCCCCCc
Q 039922 382 CFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGEL--PSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKL 459 (973)
Q Consensus 382 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 459 (973)
.+++|+.|++++|+..+.. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|++++ +|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8889999999999665433 6778899999999999988763 7888899999999999999886 45888889999
Q ss_pred ceEeecCCcCCCCCc-hhhhcCCcCcEEeCcCCcccCCCccccccccccceeecccccccc-ccCcccCccccceeeeec
Q 039922 460 TGILINGNNFTGEVP-SQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTG-ELPRNLNSLTALIVLNLS 537 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls 537 (973)
+.|++++|++.+..| ..+..+++|++|++++|++++..|..++.+++|++|++++|++++ .+|..+..+++|+.|+|+
T Consensus 402 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 481 (606)
T 3vq2_A 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLS 481 (606)
T ss_dssp CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECC
Confidence 999999999988777 678889999999999999998888889999999999999999987 478889999999999999
Q ss_pred cCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCCCCCcc---cccccccCCCCCCCC
Q 039922 538 TNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDH---DLFISSLLDNPGLCS 613 (973)
Q Consensus 538 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~---~~~~~~~~~n~~~c~ 613 (973)
+|++++..|..|..+++|++|+|++|++++.+|..+..+ .|+.|++++|+++ .+|..+.. ......+.+||+.|+
T Consensus 482 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 482 KCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 999998888889999999999999999998889888888 8999999999998 56665432 255567888999998
Q ss_pred CCC
Q 039922 614 PDL 616 (973)
Q Consensus 614 ~~l 616 (973)
++.
T Consensus 561 c~~ 563 (606)
T 3vq2_A 561 CEH 563 (606)
T ss_dssp STT
T ss_pred Ccc
Confidence 865
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-56 Score=556.94 Aligned_cols=518 Identities=22% Similarity=0.233 Sum_probs=291.1
Q ss_pred CccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCc
Q 039922 60 CNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPD 139 (973)
Q Consensus 60 C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~ 139 (973)
|+|.+|.+ ...+++.|||+++.+++..|..|.++++|++|||++|.+.+.+++.+|.++++|++|+|++|.+.+..|+
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56666665 2345677777777777666777777777777777777666666666777777777777777777776677
Q ss_pred cccCCCCCCEEECcCCcCCCCCCcc--cCCCCcccEEecCCcccCCccc-ccccccccccEeeccCcCCCCCCCCccccC
Q 039922 140 FSREFANLQVLDLSRNNFSGDIPES--FGRFPVLKVLNLGGNLLSGLIP-SFLGNLTELTHFELGYNPLKSSPLPSSVGN 216 (973)
Q Consensus 140 ~~~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 216 (973)
.|+.+++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.++.. .+..+..
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~-~~~~l~~ 170 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV-CEHELEP 170 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC-CSGGGHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee-CHHHccc
Confidence 7777777777777777777655544 6777777777777777766544 4567777777777777776543 3455555
Q ss_pred c--chhHHHhhccCcccccCCccccCCCC------CCEEEccCCcccccCCcCCCCC---CCCCEEEccCC---------
Q 039922 217 L--SKLENLWAAKANLIGEIPDSIGKLAF------LSNLDLSDNFLSGKIPHSFSGL---ASIEQIELFDN--------- 276 (973)
Q Consensus 217 l--~~L~~L~l~~n~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~n--------- 276 (973)
+ ++|+.|+++.|.+.+..|..++.+.+ |+.|++++|.+++..+..+... .+++.|.++.+
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 5 55666666666666666655555444 6666666666665555544332 34555555422
Q ss_pred cCcccCchhccCC--CccceeeccccccCCCChhhhhcc-cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCC
Q 039922 277 QLSGELPESLSNL--TTLLRLDISQNNLTGNLPETIAAM-SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKL 353 (973)
Q Consensus 277 ~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 353 (973)
.+.+..+..+..+ ++|+.|++++|.+++..+..+... +|+.|+|++|++++..|..|..+++|++|+|++|++++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 2222222233332 445555555555554444444333 4555555555555555555555555555555555555444
Q ss_pred CCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCC
Q 039922 354 PDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLP 433 (973)
Q Consensus 354 p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 433 (973)
|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+++. ..+++|+.|++++|+++. +|.. ..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~-l~~~---~~ 401 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVT-LPKI---NL 401 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCC-CCCC---CT
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCccc-cccc---cc
Confidence 55555555555555555555555555555555555555555555421 124455555555555552 2221 23
Q ss_pred CccEEEeecCcccCCCC-CCCCCCCCcceEeecCCcCCCCCch-hhhcCCcCcEEeCcCCccc-----CCCccccccccc
Q 039922 434 EVDFFEMYNNRFEGSIS-PSISNAPKLTGILINGNNFTGEVPS-QICTLRQLQAVDLSQNRFS-----GHLPTCITQLNK 506 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~ 506 (973)
+++.|++++|++++... ..+..+++|+.|++++|++++..+. .+..+++|+.|+|++|.++ +..|..|..+++
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 45555555555554321 1133455555555555555543222 2333455555555555554 233344555555
Q ss_pred cceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcccccceeccCC
Q 039922 507 LQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHN 586 (973)
Q Consensus 507 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N 586 (973)
|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|..+. .|+.+++++|
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--~L~~l~l~~N 557 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--SLSVLDITHN 557 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--SCCEEEEEEE
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC--CcCEEEecCC
Confidence 55555555555555555555555555555555555544444433 5555555555555555554432 3455555555
Q ss_pred cCcccCC
Q 039922 587 KLYGEVP 593 (973)
Q Consensus 587 ~l~g~~p 593 (973)
++.+..+
T Consensus 558 p~~C~c~ 564 (844)
T 3j0a_A 558 KFICECE 564 (844)
T ss_dssp CCCCSSS
T ss_pred Ccccccc
Confidence 5555444
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.4e-58 Score=550.80 Aligned_cols=514 Identities=18% Similarity=0.256 Sum_probs=347.3
Q ss_pred hhHHHHHHHhhhccCCCCC-------ccCCccCCCCCCCCcc---ceeEEcCCCCceeEeecCCCccCCCCCCCccCccc
Q 039922 28 GDAEILIRVKSDQLDDPNR-------KLGDWVRTSQQSPCNW---TGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRT 97 (973)
Q Consensus 28 ~~~~~l~~~k~~~~~d~~~-------~~~sw~~~~~~~~C~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~ 97 (973)
.|++||.+||++.-.+.+. ..++|.. +.+||.| +||+|+.. +||+.|+|++++++|.+|++|++|++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~--~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNF--NKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCC--SSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC--CCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 5899999999997443333 2348964 4689999 99999875 79999999999999999999999999
Q ss_pred cceeccCCCcc------cC------cCCcCcCCCcCCccEEecccccccccCCccccC-CCCCCEEECcCCcCCCCCCcc
Q 039922 98 LRNLNLSDNYF------NG------TLSSQSLSPCFHLQVLALDYNVFIGELPDFSRE-FANLQVLDLSRNNFSGDIPES 164 (973)
Q Consensus 98 L~~L~Ls~n~l------~~------~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~p~~ 164 (973)
|++|||++|.+ .| .+|.. .+..|+ +++++|.+.+.+|..+.. +..+..+++....+..
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~---~~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 177 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDE---QKQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK----- 177 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHH---HHHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC-----
T ss_pred ceEEECcCCccccCCccccccccccCchHH---HHHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc-----
Confidence 99999999987 22 22221 144566 677777766666655542 2233334444333321
Q ss_pred cCCCCcccEEecC--CcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCcccc--C
Q 039922 165 FGRFPVLKVLNLG--GNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIG--K 240 (973)
Q Consensus 165 ~~~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~--~ 240 (973)
.....++.+.+. +|++++ +|..|+++++|++|+|++|.++...++.... + ...+...+.+|+.++ +
T Consensus 178 -~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~--~------~~~~~~~~~ip~~l~~~~ 247 (636)
T 4eco_A 178 -SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWE--N------ENSEYAQQYKTEDLKWDN 247 (636)
T ss_dssp -CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--C------TTSHHHHHHTTSCCCGGG
T ss_pred -ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccc--c------cccchhcccCchhhhhcc
Confidence 112233333343 578888 7888999999999999999876521111000 0 011122345888888 9
Q ss_pred CCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCc-Ccc-cCchhccCC------CccceeeccccccCCCChh--hh
Q 039922 241 LAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQ-LSG-ELPESLSNL------TTLLRLDISQNNLTGNLPE--TI 310 (973)
Q Consensus 241 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~~~--~~ 310 (973)
+++|++|+|++|.+.+.+|..|+++++|++|++++|+ ++| .+|..++.+ ++|+.|++++|+++ .+|. .+
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 9999999999999999999999999999999999998 888 788888776 88888888888888 6665 55
Q ss_pred hcc-cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCC-ccceeeecccccccCCccccccC--C
Q 039922 311 AAM-SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSN-LEYFDVSTNDFTGELPRFLCFRN--K 386 (973)
Q Consensus 311 ~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~ 386 (973)
... +|+.|++++|+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+.... +
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 403 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSC
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCc
Confidence 544 68888888888887777 7788888888888888888 77777888888 888888888887 6666666544 6
Q ss_pred chhhhcccCccCCCCCCccC-------CcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCC--
Q 039922 387 LQCIIIFNNRFSGKIPESYG-------ECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAP-- 457 (973)
Q Consensus 387 L~~L~L~~n~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-- 457 (973)
|+.|++++|++.+..|..+. .+++|++|++++|++++..+..+..+++|+.|+|++|+++...+..+....
T Consensus 404 L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~ 483 (636)
T 4eco_A 404 MSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENEN 483 (636)
T ss_dssp EEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEE
T ss_pred cCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccccc
Confidence 77777777777777777776 666777777777777754444555677777777777777733222222222
Q ss_pred -----CcceEeecCCcCCCCCchhhh--cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCcccc
Q 039922 458 -----KLTGILINGNNFTGEVPSQIC--TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTA 530 (973)
Q Consensus 458 -----~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 530 (973)
+|+.|++++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 484 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~-------------- 547 (636)
T 4eco_A 484 FKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR-------------- 547 (636)
T ss_dssp CTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB--------------
T ss_pred ccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc--------------
Confidence 5666666666666 4555554 56666666666666664 55556666666666663221
Q ss_pred ceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcccccceeccCCcCc
Q 039922 531 LIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHNKLY 589 (973)
Q Consensus 531 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N~l~ 589 (973)
++++|++.+.+|..+.++++|++|+|++|++ +.+|..+. -.|+.|++++|++.
T Consensus 548 ----~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 548 ----DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNI 600 (636)
T ss_dssp ----CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTC
T ss_pred ----ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCc
Confidence 1134444445555555555555555555555 34554433 24555555555444
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.9e-56 Score=538.38 Aligned_cols=499 Identities=20% Similarity=0.204 Sum_probs=417.1
Q ss_pred eeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCc
Q 039922 100 NLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGN 179 (973)
Q Consensus 100 ~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 179 (973)
.++.++..++ .+|.. +. .++++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 16 ~~~c~~~~l~-~iP~~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGT-LP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp EEECTTSCCS-SCCTT-SC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEECCCCCcc-cCcCC-CC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC
Confidence 4677777776 56643 33 26899999999999999999999999999999999999988999999999999999999
Q ss_pred ccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCC
Q 039922 180 LLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIP 259 (973)
Q Consensus 180 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 259 (973)
++++..|..|+++++|++|+|++|+++.++ |..++++++|++|++++|.+.+..++.+..+++|++|++++|.+++..|
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSID-FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGG-GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred cccccChhhhcccccccEeeccccCcccCC-cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 999999999999999999999999998742 4567788888888888888777544444457888888888888887777
Q ss_pred cCCCCCCCCC--EEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcc---cCcEEEccCC---cCCCCCCc
Q 039922 260 HSFSGLASIE--QIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAM---SLESLNLNDN---YFTGEIPE 331 (973)
Q Consensus 260 ~~~~~l~~L~--~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~---~L~~L~L~~N---~l~~~~p~ 331 (973)
..|+.+++|+ .|++++|++++..|..+.. .+|+.|++++|. ..+..+... .++.+.+... ......+.
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~ 246 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPA 246 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGG
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChh
Confidence 7777888887 7888888888766665544 578888888776 223333222 3344443321 11122233
Q ss_pred cccCCC--ccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcc
Q 039922 332 SLASNP--NLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECK 409 (973)
Q Consensus 332 ~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 409 (973)
.+..+. +|+.|++++|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++.+..|..+..++
T Consensus 247 ~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 325 (606)
T 3t6q_A 247 VFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFP 325 (606)
T ss_dssp GGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT
T ss_pred HhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccC
Confidence 444443 7999999999999888888999999999999999999 7888899999999999999999988899999999
Q ss_pred eeeEEEccCCccccccCc-ccCCCCCccEEEeecCcccCCC--CCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEE
Q 039922 410 TLNYLRFGGNELQGELPS-KFWGLPEVDFFEMYNNRFEGSI--SPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAV 486 (973)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 486 (973)
+|++|++++|.+.+..+. .+..+++|+.|++++|++++.. +..+..+++|++|++++|.+.+..|..+..+++|++|
T Consensus 326 ~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 999999999999866654 5999999999999999999876 7889999999999999999999999999999999999
Q ss_pred eCcCCcccCCCccc-cccccccceeeccccccccccCcccCccccceeeeeccCcccCC---CCccccccccccEEecCC
Q 039922 487 DLSQNRFSGHLPTC-ITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGT---IPPELGNLAVLTSLDLSS 562 (973)
Q Consensus 487 ~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~ 562 (973)
++++|++++..|.. +..+++|+.|++++|++++..|..+..+++|+.|+|++|++++. .+..+..+++|++|+|++
T Consensus 406 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 485 (606)
T 3t6q_A 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSF 485 (606)
T ss_dssp ECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTT
T ss_pred ECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCC
Confidence 99999999876654 89999999999999999999999999999999999999999873 346799999999999999
Q ss_pred CcCccccChhhhcc-cccceeccCCcCcccCCCCCcc--cccccccCCCC
Q 039922 563 NLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDH--DLFISSLLDNP 609 (973)
Q Consensus 563 N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~--~~~~~~~~~n~ 609 (973)
|++++..|..+..+ .|+.|++++|++++.+|..+.. .. ...+.+|.
T Consensus 486 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~ 534 (606)
T 3t6q_A 486 CDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSC
T ss_pred CccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCc
Confidence 99999999999998 9999999999999998876642 23 34445554
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-56 Score=545.35 Aligned_cols=498 Identities=21% Similarity=0.257 Sum_probs=293.3
Q ss_pred hhhHHHHHHHhhhccCCCCCccCCccCCC---CCCC--Ccc------------ceeEEcCCCCceeEeecCCCccCCCCC
Q 039922 27 HGDAEILIRVKSDQLDDPNRKLGDWVRTS---QQSP--CNW------------TGITCETQNQSVDGIDLSGFDLSGGFP 89 (973)
Q Consensus 27 ~~~~~~l~~~k~~~~~d~~~~~~sw~~~~---~~~~--C~w------------~gv~c~~~~~~v~~l~l~~~~l~g~~~ 89 (973)
..|++||++||+++ .|| +|..+. ..+| |.| +||+|+. .+||+.|+|++++++|.+|
T Consensus 268 ~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 268 IKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEEC
T ss_pred hHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCc
Confidence 45899999999997 666 797543 2355 999 9999987 5799999999999999999
Q ss_pred CCccCccccceecc-CCCcccCcCCcCcCCC---cCC--ccEEecc----------ccccccc-----------CCcccc
Q 039922 90 NGFCRIRTLRNLNL-SDNYFNGTLSSQSLSP---CFH--LQVLALD----------YNVFIGE-----------LPDFSR 142 (973)
Q Consensus 90 ~~~~~l~~L~~L~L-s~n~l~~~~~~~~l~~---l~~--L~~L~L~----------~n~~~~~-----------~~~~~~ 142 (973)
++|++|++|++||| ++|.+.|..+...... +.. ++.+... ...+.+. .+....
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 9999887744321111 000 0000000 0000000 000001
Q ss_pred CCCCCCEEECcC--CcCCCCCCcccCCCCcccEEecCCcccCC-----------------ccccccc--ccccccEeecc
Q 039922 143 EFANLQVLDLSR--NNFSGDIPESFGRFPVLKVLNLGGNLLSG-----------------LIPSFLG--NLTELTHFELG 201 (973)
Q Consensus 143 ~l~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~Ls 201 (973)
....++.+.+.. |++++ +|..|+++++|++|+|++|++++ .+|..++ ++++|++|+|+
T Consensus 421 ~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred cccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 112222222222 44444 45555555555555555555554 2555555 66666666665
Q ss_pred CcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCc-ccc-cCCcCCC-------CCCCCCEEE
Q 039922 202 YNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNF-LSG-KIPHSFS-------GLASIEQIE 272 (973)
Q Consensus 202 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~~~~~~-------~l~~L~~L~ 272 (973)
+|.+.. .+|..++++++|++|+|++|+ +++ .+|..++ .+++|++|+
T Consensus 500 ~N~l~~-------------------------~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 500 NCPNMT-------------------------QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp SCTTCC-------------------------SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred CCCCCc-------------------------cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 554422 233334444444444444443 433 3333222 222444455
Q ss_pred ccCCcCcccCch--hccCCCccceeeccccccCCCChhhhhc-ccCcEEEccCCcCCCCCCccccCCCc-cceeeecccc
Q 039922 273 LFDNQLSGELPE--SLSNLTTLLRLDISQNNLTGNLPETIAA-MSLESLNLNDNYFTGEIPESLASNPN-LVQLKLFNNS 348 (973)
Q Consensus 273 L~~n~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~ 348 (973)
+++|+++ .+|. .+.++++|+.|+|++|.++ .+| .+.. .+|+.|+|++|+++ .+|..+..+++ |+.|+|++|+
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 5555444 4444 4445555555555555444 333 2221 23444444555554 45555666666 6666666666
Q ss_pred ccCCCCCCccCCCC--ccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccC--CcceeeEEEccCCccccc
Q 039922 349 FSGKLPDDLGKYSN--LEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYG--ECKTLNYLRFGGNELQGE 424 (973)
Q Consensus 349 l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~ 424 (973)
++ .+|..+..++. |+.|+|++|++++.+|... ..+. .+.+|++|+|++|+++..
T Consensus 631 L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~---------------------~~l~~~~~~~L~~L~Ls~N~L~~l 688 (876)
T 4ecn_A 631 LK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNIS---------------------CSMDDYKGINASTVTLSYNEIQKF 688 (876)
T ss_dssp CC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCS---------------------SCTTTCCCCCEEEEECCSSCCCSC
T ss_pred CC-cCchhhhccccCCCCEEECcCCcCCCccccch---------------------hhhccccCCCcCEEEccCCcCCcc
Confidence 66 55665555443 6666666666665544321 1111 223566666666666633
Q ss_pred cCcccCCCCCccEEEeecCcccCCCCCCCC--------CCCCcceEeecCCcCCCCCchhhh--cCCcCcEEeCcCCccc
Q 039922 425 LPSKFWGLPEVDFFEMYNNRFEGSISPSIS--------NAPKLTGILINGNNFTGEVPSQIC--TLRQLQAVDLSQNRFS 494 (973)
Q Consensus 425 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--------~~~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~ 494 (973)
.+..+..+++|+.|+|++|+++. +|..+. ++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|+
T Consensus 689 p~~~~~~l~~L~~L~Ls~N~L~~-ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~ 766 (876)
T 4ecn_A 689 PTELFATGSPISTIILSNNLMTS-IPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS 766 (876)
T ss_dssp CHHHHHTTCCCSEEECCSCCCSC-CCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCS
T ss_pred CHHHHccCCCCCEEECCCCcCCc-cChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCC
Confidence 33333466666666666666663 333322 2237777788877777 6677776 7778888888888887
Q ss_pred CCCccccccccccceeeccc------cccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccc
Q 039922 495 GHLPTCITQLNKLQQLELQE------NMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 495 ~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
+ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++...
T Consensus 767 ~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i 842 (876)
T 4ecn_A 767 S-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISI 842 (876)
T ss_dssp S-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEE
T ss_pred c-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCcc
Confidence 5 677777888888887765 777777888888888888888888888 57777765 5788888888887755
Q ss_pred cChhhhcc-cccceeccCCcCc
Q 039922 569 IPLELTKL-KLNQFNISHNKLY 589 (973)
Q Consensus 569 ~p~~l~~l-~l~~l~l~~N~l~ 589 (973)
-+..+... .+..+.+++|++.
T Consensus 843 ~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 843 DVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp ECGGGHHHHHTTCCEEECCTTS
T ss_pred ChHHccccccchheeecCCCcc
Confidence 55555444 5666666666554
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4e-56 Score=554.99 Aligned_cols=524 Identities=23% Similarity=0.221 Sum_probs=455.5
Q ss_pred eecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccC-CccccCCCCCCEEECcCC
Q 039922 77 IDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGEL-PDFSREFANLQVLDLSRN 155 (973)
Q Consensus 77 l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~-~~~~~~l~~L~~L~Ls~n 155 (973)
.|.++++++. +|. -.++|++|||++|.++ .+++.+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 9 ~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~-~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 9 AFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIR-TVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEESCCCSSC-CCS---SCTTCCEEEEESCCCC-EECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEccCCCCCC-CCC---CCCCcCEEECCCCcCC-ccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3445566664 454 4578999999999998 555678999999999999999666555 889999999999999999
Q ss_pred cCCCCCCcccCCCCcccEEecCCcccCCccccc--ccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCccccc
Q 039922 156 NFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSF--LGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGE 233 (973)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 233 (973)
.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.++....+..++++++|++|++++|.+.+.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999876655 999999999999999999877778899999999999999999999
Q ss_pred CCccccCC--CCCCEEEccCCcccccCCcCCCCCCC------CCEEEccCCcCcccCchhccCC---Cccceeecccc--
Q 039922 234 IPDSIGKL--AFLSNLDLSDNFLSGKIPHSFSGLAS------IEQIELFDNQLSGELPESLSNL---TTLLRLDISQN-- 300 (973)
Q Consensus 234 ~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~------L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N-- 300 (973)
.|..++.+ ++|+.|++++|.+.+..|..+..+.+ |+.|++++|++++..+..+... .+++.|+++.+
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99999888 89999999999999988888777665 9999999999998888776653 57788887733
Q ss_pred -------ccCCCChhhhhc---ccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeec
Q 039922 301 -------NLTGNLPETIAA---MSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVST 370 (973)
Q Consensus 301 -------~l~~~~~~~~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 370 (973)
.+.+..+..+.. .+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 333333333333 3799999999999999999999999999999999999998899999999999999999
Q ss_pred ccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCC
Q 039922 371 NDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSIS 450 (973)
Q Consensus 371 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 450 (973)
|++++..|..+..+++|+.|++++|++.+..+..|..+++|++|+|++|.+++. ..+++|+.|++++|+++.. |
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~l-~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVTL-P 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCCC-C
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcccc-c
Confidence 999999999999999999999999999988888999999999999999999853 3388999999999999844 3
Q ss_pred CCCCCCCCcceEeecCCcCCCCC-chhhhcCCcCcEEeCcCCcccCCCcc-ccccccccceeeccccccc-----cccCc
Q 039922 451 PSISNAPKLTGILINGNNFTGEV-PSQICTLRQLQAVDLSQNRFSGHLPT-CITQLNKLQQLELQENMFT-----GELPR 523 (973)
Q Consensus 451 ~~~~~~~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~ 523 (973)
.. ..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..|.
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 32 567999999999999643 33466899999999999999965443 4567899999999999997 45567
Q ss_pred ccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcccccceeccCCcCcccCCCCCccccccc
Q 039922 524 NLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHNKLYGEVPSDFDHDLFIS 603 (973)
Q Consensus 524 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N~l~g~~p~~~~~~~~~~ 603 (973)
.|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ..|+.|++++|+|+|.+|..|. .+...
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~~-~L~~l 552 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVFV-SLSVL 552 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCCS-SCCEE
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHhC-CcCEE
Confidence 799999999999999999998899999999999999999999976665554 5899999999999999998774 46667
Q ss_pred ccCCCCCCCCCCC
Q 039922 604 SLLDNPGLCSPDL 616 (973)
Q Consensus 604 ~~~~n~~~c~~~l 616 (973)
.+.+||+.|++++
T Consensus 553 ~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 553 DITHNKFICECEL 565 (844)
T ss_dssp EEEEECCCCSSSC
T ss_pred EecCCCccccccc
Confidence 7889999997765
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-55 Score=532.12 Aligned_cols=510 Identities=19% Similarity=0.200 Sum_probs=451.8
Q ss_pred CceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEE
Q 039922 72 QSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLD 151 (973)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 151 (973)
.+++.|+|+++.+++..+.+|.++++|++|+|++|+++ .+++.+|.++++|++|+|++|.+.+..|..|+.+++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccc-ccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 46899999999999988889999999999999999998 56667899999999999999999999999999999999999
Q ss_pred CcCCcCCCCCCcccCCCCcccEEecCCcccCC-cccccccccccccEeeccCcCCCCCCCCccccCcchhH----HHhhc
Q 039922 152 LSRNNFSGDIPESFGRFPVLKVLNLGGNLLSG-LIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLE----NLWAA 226 (973)
Q Consensus 152 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~----~L~l~ 226 (973)
|++|.+++..|..++++++|++|+|++|++++ .+|..|+++++|++|+|++|+++.+ .|..++.+++|+ .|+++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI-TVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE-CTTTTHHHHHCTTCCCEEECT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec-Chhhhhhhhccccccceeecc
Confidence 99999998888899999999999999999987 5699999999999999999999875 366788888876 69999
Q ss_pred cCcccccCCccccCCCCCCEEEccCCccc-ccCCcCCCCCCCCCEEEccCCcCcc------c---CchhccCCCccceee
Q 039922 227 KANLIGEIPDSIGKLAFLSNLDLSDNFLS-GKIPHSFSGLASIEQIELFDNQLSG------E---LPESLSNLTTLLRLD 296 (973)
Q Consensus 227 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~------~---~p~~l~~l~~L~~L~ 296 (973)
+|.+.+..+..+... +|+.|++++|.++ +..|..+.++++|+.+++..+.+.+ . .+..+..+ +++.++
T Consensus 190 ~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l-~l~~l~ 267 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV-TIDEFR 267 (606)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGS-EEEEEE
T ss_pred CCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhc-cHhhee
Confidence 999987766666555 8999999999997 4677889999999999886655432 1 12223333 466777
Q ss_pred c-cccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccc
Q 039922 297 I-SQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTG 375 (973)
Q Consensus 297 L-s~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 375 (973)
+ ..|.+++..|......+|+.|++++|.++ .+| .+..+++|+.|++++|++ +.+| .+ .+++|++|++++|+..+
T Consensus 268 l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~ 342 (606)
T 3vq2_A 268 LTYTNDFSDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSI 342 (606)
T ss_dssp ECCCTTCCGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCE
T ss_pred ccccccccccccccccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCcc
Confidence 7 77888888887334458999999999997 456 888999999999999999 5888 45 99999999999997665
Q ss_pred cCCccccccCCchhhhcccCccCCC--CCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCC-CC
Q 039922 376 ELPRFLCFRNKLQCIIIFNNRFSGK--IPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSIS-PS 452 (973)
Q Consensus 376 ~~~~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~ 452 (973)
.. .+..+++|+.|++++|++++. .|..+..+++|++|++++|.+++ .|..|..+++|+.|++++|++.+..+ ..
T Consensus 343 ~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 419 (606)
T 3vq2_A 343 SF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSA 419 (606)
T ss_dssp EC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTT
T ss_pred ch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhh
Confidence 44 567899999999999999876 37889999999999999999986 55889999999999999999999888 78
Q ss_pred CCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccC-CCccccccccccceeeccccccccccCcccCccccc
Q 039922 453 ISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSG-HLPTCITQLNKLQQLELQENMFTGELPRNLNSLTAL 531 (973)
Q Consensus 453 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (973)
+..+++|+.|++++|.+++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|+|++|++++..|..+..+++|
T Consensus 420 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 499 (606)
T 3vq2_A 420 FLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL 499 (606)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC
Confidence 9999999999999999999999999999999999999999997 479999999999999999999999999999999999
Q ss_pred eeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc--cccceeccCCcCcccCCC
Q 039922 532 IVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL--KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 532 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~l~~l~l~~N~l~g~~p~ 594 (973)
+.|+|++|++++.+|..|.++++|++|||++|+++ .+|..+..+ .|+.+++++|++.+..+.
T Consensus 500 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 500 QLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999988999999999999999999999 788888887 499999999999997774
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-52 Score=501.32 Aligned_cols=496 Identities=20% Similarity=0.229 Sum_probs=434.3
Q ss_pred CCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCC
Q 039922 88 FPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGR 167 (973)
Q Consensus 88 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 167 (973)
+|..+. +++++|||++|+++ .+++.+|.++++|++|+|++|.+.+..+..|+.+++|++|+|++|.+++..|..|++
T Consensus 22 ip~~l~--~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 22 IPDNLP--FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp CCSSSC--SSCCEEECCSCCCC-EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred cCCCcc--ccccEEEccCCccC-ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 454443 47899999999998 556678999999999999999998888889999999999999999999888889999
Q ss_pred CCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCC---
Q 039922 168 FPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFL--- 244 (973)
Q Consensus 168 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--- 244 (973)
+++|++|+|++|++++..+..|+++++|++|+|++|.++.+.+|..++++++|++|++++|.+.+..|..++.+++|
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~ 178 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh
Confidence 99999999999999987766799999999999999999887788999999999999999999998888889888888
Q ss_pred -CEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcc-cCchhccCCCccceeeccccccCC------CC---hhhhhcc
Q 039922 245 -SNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSG-ELPESLSNLTTLLRLDISQNNLTG------NL---PETIAAM 313 (973)
Q Consensus 245 -~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~------~~---~~~~~~~ 313 (973)
+.|++++|.+++..|..|... +|+.|++++|.... .++..+..++.++.+++..+.+.. .. .......
T Consensus 179 ~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l 257 (570)
T 2z63_A 179 NLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257 (570)
T ss_dssp CCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGS
T ss_pred hhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccccc
Confidence 899999999998888888776 89999999986542 456677788888777665443321 11 1222333
Q ss_pred cCcEEEccCC-cCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhc
Q 039922 314 SLESLNLNDN-YFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIII 392 (973)
Q Consensus 314 ~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 392 (973)
.++.+++++| .+.+.+|..+..+++|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. ..+++|+.|++
T Consensus 258 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l 332 (570)
T 2z63_A 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTF 332 (570)
T ss_dssp EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEE
T ss_pred chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeC
Confidence 6889999998 888899999999999999999999998 688888888 9999999999998 5555 47889999999
Q ss_pred ccCccCCCCCCccCCcceeeEEEccCCcccccc--CcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCC
Q 039922 393 FNNRFSGKIPESYGECKTLNYLRFGGNELQGEL--PSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFT 470 (973)
Q Consensus 393 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~ 470 (973)
++|.+.+..+. ..+++|++|++++|.+++.. +..+.++++|+.|++++|++.+..+. +..+++|+.|++++|.+.
T Consensus 333 ~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~ 409 (570)
T 2z63_A 333 TSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLK 409 (570)
T ss_dssp ESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEE
T ss_pred cCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccc
Confidence 99999877665 78999999999999998765 77899999999999999999976555 999999999999999999
Q ss_pred CCCc-hhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccc-cccCcccCccccceeeeeccCcccCCCCcc
Q 039922 471 GEVP-SQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFT-GELPRNLNSLTALIVLNLSTNQLTGTIPPE 548 (973)
Q Consensus 471 ~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 548 (973)
+..| ..+..+++|++|++++|++++..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++..|..
T Consensus 410 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 489 (570)
T 2z63_A 410 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489 (570)
T ss_dssp SCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred cccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhh
Confidence 8766 57889999999999999999999999999999999999999998 689999999999999999999999888999
Q ss_pred ccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCCCC
Q 039922 549 LGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSD 595 (973)
Q Consensus 549 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~ 595 (973)
|..+++|++|+|++|++++..|..+..+ .|+.|++++|+++|.+|..
T Consensus 490 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 490 FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999999999999999998888888888 8999999999999999864
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-51 Score=491.67 Aligned_cols=485 Identities=22% Similarity=0.287 Sum_probs=278.0
Q ss_pred CCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCC
Q 039922 59 PCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELP 138 (973)
Q Consensus 59 ~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~ 138 (973)
.|.|.|| |+... ++++ .+|+.+. ++|++|+|++|+++ .+++..|.++++|++|+|++|.+.+..|
T Consensus 3 ~C~~~~~-c~~~~----------~~l~-~ip~~~~--~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDGRS----------RSFT-SIPSGLT--AAMKSLDLSFNKIT-YIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp EECTTSE-EECTT----------SCCS-SCCSCCC--TTCCEEECCSSCCC-EECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred cCCCCce-EECCC----------Cccc-cccccCC--CCccEEECcCCccC-ccChhhhhcCCcccEEECCCCCcCccCh
Confidence 4999999 96543 3333 3555543 68888888888887 3444567888888888888888877777
Q ss_pred ccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCc-ccccccccccccEeeccCcCCCCCCCCccccCc
Q 039922 139 DFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGL-IPSFLGNLTELTHFELGYNPLKSSPLPSSVGNL 217 (973)
Q Consensus 139 ~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 217 (973)
+.|+.+++|++|+|++|.+++..|..|+++++|++|+|++|++++. .|..++++++|++|++++|.+.....+..+.
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~-- 145 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFA-- 145 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhh--
Confidence 7788888888888888888776666677888888888888887753 4567777777888887777632211123444
Q ss_pred chhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeec
Q 039922 218 SKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDI 297 (973)
Q Consensus 218 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 297 (973)
++++|++|++++|.+++..|..++.+++|++|+++.|.+.......+..+++|+.|++
T Consensus 146 ----------------------~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 203 (549)
T 2z81_A 146 ----------------------GLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLEL 203 (549)
T ss_dssp ----------------------TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEE
T ss_pred ----------------------cccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEc
Confidence 4445555555555555444555555555555555555444221112233445555555
Q ss_pred cccccCCCC--hhhh--hcccCcEEEccCCcCCCCCC----ccccCCCccceeeeccccccCCC------CCCccCCCCc
Q 039922 298 SQNNLTGNL--PETI--AAMSLESLNLNDNYFTGEIP----ESLASNPNLVQLKLFNNSFSGKL------PDDLGKYSNL 363 (973)
Q Consensus 298 s~N~l~~~~--~~~~--~~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~------p~~l~~l~~L 363 (973)
++|++++.. +..+ ...+|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. ...+..+.+|
T Consensus 204 ~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L 283 (549)
T 2z81_A 204 RDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKV 283 (549)
T ss_dssp ESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTC
T ss_pred cCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccc
Confidence 555554321 1011 11245555555555443222 22234455555555555554321 1123445555
Q ss_pred cceeeeccccccc-----CCccccccCCchhhhcccCccCCCCCCcc-CCcceeeEEEccCCccccccC---cccCCCCC
Q 039922 364 EYFDVSTNDFTGE-----LPRFLCFRNKLQCIIIFNNRFSGKIPESY-GECKTLNYLRFGGNELQGELP---SKFWGLPE 434 (973)
Q Consensus 364 ~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~ 434 (973)
+.|+++++.+... ++..+....+|+.|++++|++. .+|..+ ..+++|++|++++|++++..| ..+..+++
T Consensus 284 ~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~ 362 (549)
T 2z81_A 284 ETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362 (549)
T ss_dssp CEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTT
T ss_pred ccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhcccc
Confidence 5555555544321 1122233345556666666654 344433 355666666666666655442 23455666
Q ss_pred ccEEEeecCcccCCCC--CCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeec
Q 039922 435 VDFFEMYNNRFEGSIS--PSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLEL 512 (973)
Q Consensus 435 L~~L~L~~N~l~~~~~--~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|+.|+|
T Consensus 363 L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~L 438 (549)
T 2z81_A 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDV 438 (549)
T ss_dssp CCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEEC
T ss_pred CcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEEC
Confidence 6666666666654322 33555666666666666666 45555666666666666666665 3444332 45666666
Q ss_pred cccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCccc
Q 039922 513 QENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGE 591 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~ 591 (973)
++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|..+..+ .|+.|++++|+++|.
T Consensus 439 s~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 439 SNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 666666432 35566666666666666 4554 3456666666666666666555556665 666666666666665
Q ss_pred CC
Q 039922 592 VP 593 (973)
Q Consensus 592 ~p 593 (973)
+|
T Consensus 513 ~~ 514 (549)
T 2z81_A 513 CP 514 (549)
T ss_dssp HH
T ss_pred Cc
Confidence 55
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=482.88 Aligned_cols=490 Identities=21% Similarity=0.237 Sum_probs=426.0
Q ss_pred CceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEE
Q 039922 72 QSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLD 151 (973)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 151 (973)
.+++.|+|+++.+++..+.+|.++++|++|||++|+++ .+++.+|.++++|++|+|++|.+.+..|..|+.+++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 46889999999999988889999999999999999998 56778899999999999999999998899999999999999
Q ss_pred CcCCcCCCCCCcccCCCCcccEEecCCcccCCc-ccccccccccccEeeccCcCCCCCCCCccccCcchh----HHHhhc
Q 039922 152 LSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGL-IPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKL----ENLWAA 226 (973)
Q Consensus 152 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L----~~L~l~ 226 (973)
+++|++++..+..++++++|++|+|++|.+++. +|..|+++++|++|++++|+++.. .+..++.+++| +.|+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI-YCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE-CGGGGHHHHTCTTCCCEEECT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee-cHHHccchhccchhhhhcccC
Confidence 999999977666799999999999999999974 699999999999999999999764 35678888888 788999
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcccc-cCCcCCCCCCCCCEEEccCCcC------cccCchhccCCC--ccceeec
Q 039922 227 KANLIGEIPDSIGKLAFLSNLDLSDNFLSG-KIPHSFSGLASIEQIELFDNQL------SGELPESLSNLT--TLLRLDI 297 (973)
Q Consensus 227 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l------~~~~p~~l~~l~--~L~~L~L 297 (973)
+|.+.+..|..+... +|+.|++++|.... .++..+.++++++.+.+..+.+ .......+..+. .++.+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 999999888888766 89999999986442 3455667777777766543322 212222333333 3577788
Q ss_pred ccc-ccCCCChhhhhcc-cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccc
Q 039922 298 SQN-NLTGNLPETIAAM-SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTG 375 (973)
Q Consensus 298 s~N-~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 375 (973)
++| .+.+..|..+... +|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. ..+++|++|++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 877 7777777777664 7999999999998 678888888 9999999999998 5665 578899999999999887
Q ss_pred cCCccccccCCchhhhcccCccCCCC--CCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCC-CC
Q 039922 376 ELPRFLCFRNKLQCIIIFNNRFSGKI--PESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSIS-PS 452 (973)
Q Consensus 376 ~~~~~~~~l~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~ 452 (973)
..+. ..+++|+.|++++|++.+.. |..+..+++|++|++++|.+.+..+. +..+++|+.|++++|++.+..+ ..
T Consensus 340 ~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 340 AFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp BCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred cccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 7665 77899999999999998654 67788999999999999999976665 9999999999999999998776 57
Q ss_pred CCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCccc-CCCccccccccccceeeccccccccccCcccCccccc
Q 039922 453 ISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFS-GHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTAL 531 (973)
Q Consensus 453 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (973)
+..+++|++|++++|.+.+..|..+..+++|++|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|..+++|
T Consensus 417 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 496 (570)
T 2z63_A 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496 (570)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCC
Confidence 899999999999999999999999999999999999999998 5799999999999999999999999989999999999
Q ss_pred eeeeeccCcccCCCCccccccccccEEecCCCcCccccChh
Q 039922 532 IVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLE 572 (973)
Q Consensus 532 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 572 (973)
+.|+|++|++++..|..|.++++|+.|++++|++++..|..
T Consensus 497 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999999888888999999999999999999988853
No 16
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-50 Score=436.36 Aligned_cols=259 Identities=28% Similarity=0.432 Sum_probs=214.7
Q ss_pred CCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
++|...+.||+|+||+||+|++. +++.||||++.. ......++|.+|++++++++|||||+++++|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45778899999999999999864 477899999953 3455667899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCce
Q 039922 756 ILVYEYMPNGSLADMLHEKG----------RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVP 825 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 825 (973)
|+|||||++|+|.++++... ....++|.++++|+.|||+||+|||++ +|+||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997642 234689999999999999999999999 99999999999999999999
Q ss_pred EEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHH
Q 039922 826 RVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWV 904 (973)
Q Consensus 826 kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 904 (973)
||+|||+|+........ .......||+.|||||++.++.++.++|||||||++|||+| |+.||... ...++...+
T Consensus 168 Ki~DFGla~~~~~~~~~--~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i 243 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECI 243 (299)
T ss_dssp EECCCSCHHHHTGGGCE--EETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHH
T ss_pred EECCcccceecCCCCce--eecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHH
Confidence 99999999876544321 22234568999999999999999999999999999999999 89999753 344555555
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
..+.....+. ..+.++.+++.+||+.||++||||+||.+.|+...
T Consensus 244 ~~~~~~~~p~---------------------~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 244 TQGRVLQRPR---------------------TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHTCCCCCCT---------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCCc---------------------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 5543221111 12356889999999999999999999999998753
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.1e-50 Score=486.65 Aligned_cols=453 Identities=18% Similarity=0.280 Sum_probs=349.9
Q ss_pred CCccEEecccccccccCCccccCCCCCCEEECcCCcC------CC------CCCcccCCCCcccEEecCCcccCCccccc
Q 039922 121 FHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNF------SG------DIPESFGRFPVLKVLNLGGNLLSGLIPSF 188 (973)
Q Consensus 121 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 188 (973)
.+++.|+|++|.+.|.+|..++.|++|++|||++|.+ .+ .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4788999999999999999999999999999999976 22 334433 56778 888899998888877
Q ss_pred ccc-cccccEeeccCcCCCCCCCCccccCcchhHHHhhc--cCcccccCCccccCCCCCCEEEccCCccccc--------
Q 039922 189 LGN-LTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAA--KANLIGEIPDSIGKLAFLSNLDLSDNFLSGK-------- 257 (973)
Q Consensus 189 ~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~--~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-------- 257 (973)
+.. +.++..+++....+... ....++.+++. .|++++ +|..++++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~-------~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKS-------SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCC-------CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred HHHHHHHHhhcCccccccccc-------cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 764 45566666665554321 12233334443 578888 999999999999999999999986
Q ss_pred ---------CCcCCC--CCCCCCEEEccCCcCcccCchhccCCCccceeeccccc-cCC-CChhhhhc-------ccCcE
Q 039922 258 ---------IPHSFS--GLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNN-LTG-NLPETIAA-------MSLES 317 (973)
Q Consensus 258 ---------~~~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~~~~~~~-------~~L~~ 317 (973)
+|..++ ++++|++|++++|++.+.+|..++++++|+.|++++|+ +++ .+|..+.. .+|++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 899998 99999999999999999999999999999999999998 887 78877665 57888
Q ss_pred EEccCCcCCCCCCc--cccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCC-chhhhccc
Q 039922 318 LNLNDNYFTGEIPE--SLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNK-LQCIIIFN 394 (973)
Q Consensus 318 L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~ 394 (973)
|++++|+++ .+|. .+.++++|++|++++|+++|.+| .++.+++|++|+|++|+++ .+|..+..+++ |+.|++++
T Consensus 310 L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~ 386 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAH 386 (636)
T ss_dssp EECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCS
T ss_pred EECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccC
Confidence 888888888 7777 78888888888888888887788 7888888888888888877 55555555555 55555555
Q ss_pred CccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCC-------CCCCcceEeecCC
Q 039922 395 NRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSIS-------NAPKLTGILINGN 467 (973)
Q Consensus 395 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-------~~~~L~~L~L~~N 467 (973)
|+++ .+|..+..++ +++|+.|++++|++.+.+|..+. .+++|+.|++++|
T Consensus 387 N~l~-~lp~~~~~~~----------------------l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N 443 (636)
T 4eco_A 387 NKLK-YIPNIFDAKS----------------------VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNN 443 (636)
T ss_dssp SCCS-SCCSCCCTTC----------------------SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSS
T ss_pred CcCc-ccchhhhhcc----------------------cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCC
Confidence 5555 4444444433 11444444444444444455454 5667777778888
Q ss_pred cCCCCCchhhhcCCcCcEEeCcCCcccCCCcccccc-c-------cccceeeccccccccccCcccC--ccccceeeeec
Q 039922 468 NFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQ-L-------NKLQQLELQENMFTGELPRNLN--SLTALIVLNLS 537 (973)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 537 (973)
++++..+..+..+++|++|+|++|+++ .+|..+.. . ++|+.|+|++|+++ .+|..+. .+++|+.|+|+
T Consensus 444 ~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 521 (636)
T 4eco_A 444 QISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLS 521 (636)
T ss_dssp CCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECC
T ss_pred ccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECC
Confidence 777433334556888888888888888 55554332 2 38999999999998 7888886 89999999999
Q ss_pred cCcccCCCCccccccccccEEec------CCCcCccccChhhhcc-cccceeccCCcCcccCCCCCcccccccccCCCCC
Q 039922 538 TNQLTGTIPPELGNLAVLTSLDL------SSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDHDLFISSLLDNPG 610 (973)
Q Consensus 538 ~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~~~~~~~~~~n~~ 610 (973)
+|+|++ +|..+.++++|+.|+| ++|++.+.+|..+..+ .|+.|++++|++ +.+|..+........+.+|+.
T Consensus 522 ~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l 599 (636)
T 4eco_A 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPN 599 (636)
T ss_dssp SSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTT
T ss_pred CCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCC
Confidence 999986 8888999999999999 6788999999999999 999999999999 889988776677778889988
Q ss_pred CCCC
Q 039922 611 LCSP 614 (973)
Q Consensus 611 ~c~~ 614 (973)
.|-.
T Consensus 600 ~~~~ 603 (636)
T 4eco_A 600 ISID 603 (636)
T ss_dssp CEEE
T ss_pred cccc
Confidence 7743
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.9e-50 Score=437.18 Aligned_cols=260 Identities=23% Similarity=0.366 Sum_probs=214.1
Q ss_pred CCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
..++..+.||+|+||+||+|++. +++.||||++.... .....++|.+|+.++++++|||||+++++|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34566788999999999999863 56789999996443 334567899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC
Q 039922 756 ILVYEYMPNGSLADMLHEKGR-------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE 822 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 822 (973)
++|||||++|+|.+++..... ...++|..+++|+.|||+||+|||++ +||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence 999999999999999965321 13589999999999999999999999 99999999999999999
Q ss_pred CceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHH
Q 039922 823 MVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIV 901 (973)
Q Consensus 823 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~ 901 (973)
+.+||+|||+++.+...... .......||++|||||++.++.++.++|||||||++|||+| |+.||... ...++.
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~--~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~ 257 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYY--KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVV 257 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCB--CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHH
T ss_pred CCEEECCcccceeccCCCce--eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHH
Confidence 99999999999876544321 22344679999999999999999999999999999999999 88999753 344555
Q ss_pred HHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 902 RWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
+.+..+.....+. ..+..+.+++.+||+.||++||||.||+++|+...
T Consensus 258 ~~i~~~~~~~~p~---------------------~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 258 EMIRNRQVLPCPD---------------------DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHHTTCCCCCCT---------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHHcCCCCCCcc---------------------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 5554433221111 12356889999999999999999999999998753
No 19
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.2e-50 Score=438.79 Aligned_cols=259 Identities=27% Similarity=0.409 Sum_probs=208.1
Q ss_pred CCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
++|...++||+|+||+||+|+++ +++.||||++.. ......++|.+|++++++++|||||+++++|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 34667789999999999999864 478899999953 3455667899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC
Q 039922 756 ILVYEYMPNGSLADMLHEKGR------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM 823 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 823 (973)
|+|||||++|+|.++++.... ...++|.++++|+.|||+||+|||+. +|+||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999976432 23589999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHH
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVR 902 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~ 902 (973)
.+||+|||+++.+...... .......||+.|||||++.+..++.++|||||||++|||+| |+.||... ...++..
T Consensus 196 ~~Ki~DFGla~~~~~~~~~--~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~ 271 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAID 271 (329)
T ss_dssp EEEECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--CHHHHHH
T ss_pred cEEEcccccceeccCCCcc--eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--CHHHHHH
Confidence 9999999999876543321 22334679999999999999999999999999999999999 89999753 3445555
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.+..+.....+. ..+.++.+++.+||+.||++||||+||+++|+.+.
T Consensus 272 ~i~~g~~~~~p~---------------------~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 272 CITQGRELERPR---------------------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHTCCCCCCT---------------------TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHcCCCCCCcc---------------------cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 555443221111 12356789999999999999999999999998754
No 20
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-50 Score=430.16 Aligned_cols=262 Identities=29% Similarity=0.416 Sum_probs=206.7
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++++..+.||+|+||+||+|+++ ..||||+++.........+.|.+|++++++++|||||++++++.+ +..|+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 456788899999999999999875 369999996555556667889999999999999999999998865 56899999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
||++|+|.++++... ..+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred cCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 999999999997643 3599999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCccccccccccccCccccccccC---CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYT---KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
. ........||+.|||||++.+ +.|+.++|||||||++|||+||+.||.... ....+...+...... +.
T Consensus 187 ~--~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-~~~~~~~~~~~~~~~-p~---- 258 (307)
T 3omv_A 187 G--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-NRDQIIFMVGRGYAS-PD---- 258 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-CHHHHHHHHHTTCCC-CC----
T ss_pred c--ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-hHHHHHHHHhcCCCC-CC----
Confidence 2 122345689999999999864 468999999999999999999999997532 222222222222111 10
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.. ......+..+.+++.+||+.||++||||.||+++|+..+
T Consensus 259 --~~----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 259 --LS----------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp --ST----------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred --cc----------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 00 011123457889999999999999999999999998754
No 21
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-49 Score=434.33 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=208.8
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|++.+.||+|+||+||+|+.+ +|+.||||++.+........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999976 7999999999766656666778999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
|||++|+|.+++.... ...+++..++.|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999997643 23578999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||... ...++...+........
T Consensus 179 ~----~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~~~~~~------- 245 (350)
T 4b9d_A 179 V----ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGSFPPV------- 245 (350)
T ss_dssp H----HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCC-------
T ss_pred c----ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCC-------
Confidence 1 1233467999999999999999999999999999999999999999753 33344444433221100
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
......++.+++.+|+++||++|||+.|++++
T Consensus 246 --------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 --------------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp --------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01123568899999999999999999999875
No 22
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.8e-49 Score=469.52 Aligned_cols=481 Identities=17% Similarity=0.165 Sum_probs=364.1
Q ss_pred CccceeEEcCC--CCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccC
Q 039922 60 CNWTGITCETQ--NQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGEL 137 (973)
Q Consensus 60 C~w~gv~c~~~--~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~ 137 (973)
|++.+++.-+. ..+++.|+|+++.+++..|.+|.++++|++|+|++|+++ .+++.+|.++++|++|+|++|.+.+..
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC-ccChhhccccccCCEEECCCCccCccC
Confidence 56777776443 247999999999999988999999999999999999999 456678999999999999999999988
Q ss_pred CccccCCCCCCEEECcCCcCCC-CCCcccCCCCcccEEecCCcccCCcc-cccccccccccEeeccCcCCCCCCCCcccc
Q 039922 138 PDFSREFANLQVLDLSRNNFSG-DIPESFGRFPVLKVLNLGGNLLSGLI-PSFLGNLTELTHFELGYNPLKSSPLPSSVG 215 (973)
Q Consensus 138 ~~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 215 (973)
|..++.+++|++|+|++|.+++ ..|..++++++|++|+|++|++.+.+ +..|+++++|++|++++|.++.. .|..++
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~ 169 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY-QSQSLK 169 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE-CTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc-Chhhhh
Confidence 8889999999999999999996 36788999999999999999954444 47899999999999999998753 467777
Q ss_pred CcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccC--C-cCCCCCCCCCEEEccCCcCcccCch----hccC
Q 039922 216 NLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKI--P-HSFSGLASIEQIELFDNQLSGELPE----SLSN 288 (973)
Q Consensus 216 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--~-~~~~~l~~L~~L~L~~n~l~~~~p~----~l~~ 288 (973)
.+++|++|++..|......+..+..+++|++|++++|++++.. | .....+++|+.|++++|++++..+. .+..
T Consensus 170 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 170 SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 7777777777777654332222355777777777777777542 1 1233456777777777777654333 2344
Q ss_pred CCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCC-----CCCCccCCCCc
Q 039922 289 LTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGK-----LPDDLGKYSNL 363 (973)
Q Consensus 289 l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----~p~~l~~l~~L 363 (973)
+++|+.+++++|.+.+...-. ......+..+++|+.|++.++.+... ++..+....+|
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~-----------------~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L 312 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFN-----------------PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKV 312 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCC-----------------CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTC
T ss_pred hcccccccccccccccccccc-----------------ccchhhhhhhcccccccccccccchhhhcccchhhhhhcccc
Confidence 566666666666665421100 00112234445566666666554421 11112234566
Q ss_pred cceeeecccccccCCccc-cccCCchhhhcccCccCCCCC---CccCCcceeeEEEccCCccccccC--cccCCCCCccE
Q 039922 364 EYFDVSTNDFTGELPRFL-CFRNKLQCIIIFNNRFSGKIP---ESYGECKTLNYLRFGGNELQGELP--SKFWGLPEVDF 437 (973)
Q Consensus 364 ~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~ 437 (973)
+.|++++|+++ .+|..+ ..+++|+.|++++|++.+.+| ..++.+++|++|++++|++++..+ ..+..+++|+.
T Consensus 313 ~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~ 391 (549)
T 2z81_A 313 KRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTS 391 (549)
T ss_dssp CEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCE
T ss_pred eEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCE
Confidence 77777777765 444443 456777777777777766543 346788889999999999886543 56888999999
Q ss_pred EEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeecccccc
Q 039922 438 FEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMF 517 (973)
Q Consensus 438 L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 517 (973)
|++++|+++ .+|..+..+++|++|++++|.++ .+|..+ .++|++|+|++|++++.+ ..+++|++|+|++|+|
T Consensus 392 L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l 463 (549)
T 2z81_A 392 LDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKL 463 (549)
T ss_dssp EECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCC
T ss_pred EECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCcc
Confidence 999999998 56788888999999999999998 445443 368999999999999643 5789999999999999
Q ss_pred ccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccC
Q 039922 518 TGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 518 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
+ .+|. ...+++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++..|
T Consensus 464 ~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 464 K-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp S-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred C-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9 7776 5679999999999999999888899999999999999999999887
No 23
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-49 Score=466.41 Aligned_cols=452 Identities=21% Similarity=0.216 Sum_probs=246.9
Q ss_pred EeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCC
Q 039922 76 GIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRN 155 (973)
Q Consensus 76 ~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n 155 (973)
.||+++++++ .+|..+. ++|++|+|++|+++ .+++..|.++++|++|+|++|.+.+..|..|+.+++|++|||++|
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 4677777777 3666555 67777777777776 344456777777777777777777766777777777777777777
Q ss_pred cCCCCCCcccCCCCcccEEecCCcccCC-cccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccC
Q 039922 156 NFSGDIPESFGRFPVLKVLNLGGNLLSG-LIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEI 234 (973)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 234 (973)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.++. ..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~--------------------- 131 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SS--------------------- 131 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GG---------------------
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hh---------------------
Confidence 777 45544 67777777777777776 356677777777777777776643 12
Q ss_pred CccccCCCCC--CEEEccCCcc--cccCCcCCCCCC-CCCEEEccCCcCcccCch-hccCCCccceeeccccc-------
Q 039922 235 PDSIGKLAFL--SNLDLSDNFL--SGKIPHSFSGLA-SIEQIELFDNQLSGELPE-SLSNLTTLLRLDISQNN------- 301 (973)
Q Consensus 235 p~~l~~l~~L--~~L~Ls~N~l--~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~------- 301 (973)
+..+++| ++|++++|.+ .+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|.
T Consensus 132 ---~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 132 ---VLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp ---GGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH
T ss_pred ---ccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce
Confidence 3334444 6666666665 555555555544 233445555555543332 34555666666666655
Q ss_pred cCCCChhhhhcccCcEEEccCCcCCCCCCcccc---CCCccceeeeccccccCCCCCCc-----cCCCCccceeeecccc
Q 039922 302 LTGNLPETIAAMSLESLNLNDNYFTGEIPESLA---SNPNLVQLKLFNNSFSGKLPDDL-----GKYSNLEYFDVSTNDF 373 (973)
Q Consensus 302 l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l 373 (973)
+.+.+|......+|+.|++++|.+++..+..+. ..++|++|++++|+++|.+|..+ +.+++|+.+++++|.+
T Consensus 209 ~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~ 288 (520)
T 2z7x_B 209 FLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF 288 (520)
T ss_dssp HHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC
T ss_pred eecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce
Confidence 333333222223455555555555432111111 12466666666666666666666 6666666677766666
Q ss_pred cccCC-cccccc---CCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCC
Q 039922 374 TGELP-RFLCFR---NKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSI 449 (973)
Q Consensus 374 ~~~~~-~~~~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 449 (973)
.+| ..+..+ .+|+.|++++|++.+.. .+..+++|++|++++|++++..|..+..+++|+.|++++|++++..
T Consensus 289 --~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 364 (520)
T 2z7x_B 289 --GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELS 364 (520)
T ss_dssp --CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHH
T ss_pred --ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccc
Confidence 333 333322 34455555555443211 1134455555555555555444444444444444444444444310
Q ss_pred CCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCcc-ccccccccceeeccccccccccCcccCcc
Q 039922 450 SPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPT-CITQLNKLQQLELQENMFTGELPRNLNSL 528 (973)
Q Consensus 450 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 528 (973)
.+|..+..+++|++|++++|++++.+|. .+..+++|+.|+|++|++++.+|..+.
T Consensus 365 ----------------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-- 420 (520)
T 2z7x_B 365 ----------------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-- 420 (520)
T ss_dssp ----------------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--
T ss_pred ----------------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--
Confidence 2334445555555555555555543333 244455555555555555544444433
Q ss_pred ccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChh-hhcc-cccceeccCCcCcccC
Q 039922 529 TALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLE-LTKL-KLNQFNISHNKLYGEV 592 (973)
Q Consensus 529 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l-~l~~l~l~~N~l~g~~ 592 (973)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ .+|.. +..+ .|+.|++++|+++|..
T Consensus 421 ~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 421 PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 45555555555555 44554445555555555555555 34443 4444 4555555555555443
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.2e-47 Score=462.51 Aligned_cols=555 Identities=19% Similarity=0.198 Sum_probs=408.0
Q ss_pred CCCCccCCccCCCCCCCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCC
Q 039922 43 DPNRKLGDWVRTSQQSPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFH 122 (973)
Q Consensus 43 d~~~~~~sw~~~~~~~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~ 122 (973)
|+...+++|... -|..|..-.|.....+ .+=++.+++ .+|+.+- +++++|||++|+|+ .+++.+|.++++
T Consensus 8 ~~~~~~~~~~~~---~p~~~~~c~~~~~~~~---~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~-~l~~~~f~~l~~ 77 (635)
T 4g8a_A 8 DDDDKLAAANSS---IPESWEPCVEVVPNIT---YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLR-HLGSYSFFSFPE 77 (635)
T ss_dssp --------------------CCSEEEETTTE---EECTTSCCS-SCCSSSC--TTCCEEECTTSCCC-EECTTTTTTCTT
T ss_pred CCcchhhcccCC---CCCCCCCccccCCCCE---EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCC-CCCHHHHhCCCC
Confidence 445567777532 2344544444332222 233344454 3555442 47899999999998 778889999999
Q ss_pred ccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccC
Q 039922 123 LQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGY 202 (973)
Q Consensus 123 L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 202 (973)
|++|+|++|.|++..|++|.++++|++|+|++|+|++..+..|+++++|++|+|++|+++++.+..|+++++|++|+|++
T Consensus 78 L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~ 157 (635)
T 4g8a_A 78 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 157 (635)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecccc
Confidence 99999999999998899999999999999999999987778899999999999999999988888899999999999999
Q ss_pred cCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCC----EEEccCCcccccCCcCCCCCCCCCEEEccCCcC
Q 039922 203 NPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLS----NLDLSDNFLSGKIPHSFSGLASIEQIELFDNQL 278 (973)
Q Consensus 203 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 278 (973)
|.++.+..|..++.+++|++|++++|++.+..|..+..+.+++ .++++.|.++...+..+. ...++.+++.+|..
T Consensus 158 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~ 236 (635)
T 4g8a_A 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFD 236 (635)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCS
T ss_pred CccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhcccc
Confidence 9999888899999999999999999999999888887766544 789999999966555554 45678899998876
Q ss_pred cc-cCchhccCCCccceeeccccccC------CCChhhhhcc-cCcEEEccCCcCCC---CCCccccCCCccceeeeccc
Q 039922 279 SG-ELPESLSNLTTLLRLDISQNNLT------GNLPETIAAM-SLESLNLNDNYFTG---EIPESLASNPNLVQLKLFNN 347 (973)
Q Consensus 279 ~~-~~p~~l~~l~~L~~L~Ls~N~l~------~~~~~~~~~~-~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N 347 (973)
.. ..+..+..+..++...+..+... ......+... .+..+.+..+.... ..+..+..+.+++.+++.+|
T Consensus 237 ~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 316 (635)
T 4g8a_A 237 SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSV 316 (635)
T ss_dssp SHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESC
T ss_pred cccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccc
Confidence 53 33455677777777666544322 2222222222 45555555443322 23344566678888888888
Q ss_pred cccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCcccc--cc
Q 039922 348 SFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQG--EL 425 (973)
Q Consensus 348 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~ 425 (973)
.+.... .+.....|+.|++++|.+.+..+. .+..|+.+.+..|.+... .....+++|++|++++|.+.. ..
T Consensus 317 ~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~ 389 (635)
T 4g8a_A 317 TIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCC 389 (635)
T ss_dssp EEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEEC
T ss_pred cccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhcccccccccc
Confidence 876432 355667888888888887755443 345677777887776533 345577888888888888753 34
Q ss_pred CcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCc-hhhhcCCcCcEEeCcCCcccCCCccccccc
Q 039922 426 PSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVP-SQICTLRQLQAVDLSQNRFSGHLPTCITQL 504 (973)
Q Consensus 426 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 504 (973)
+..+..+.+|+.+++..|.+.. .+..+..+++|+.+++++|+.....+ ..+..+++++.++++.|.+++..|..+..+
T Consensus 390 ~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~ 468 (635)
T 4g8a_A 390 SQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 468 (635)
T ss_dssp CHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred ccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 5666778888888888888764 35567778888888888877765544 356778888888888888888888888888
Q ss_pred cccceeecccccc-ccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-ccccee
Q 039922 505 NKLQQLELQENMF-TGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFN 582 (973)
Q Consensus 505 ~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~ 582 (973)
++|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+ +|+.|+
T Consensus 469 ~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 548 (635)
T 4g8a_A 469 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 548 (635)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEE
T ss_pred hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEE
Confidence 8888888888874 44577888888888888888888888788888888888888888888887777778877 788888
Q ss_pred ccCCcCcccCCCCCcc---cccccccCCCCCCCCCCC
Q 039922 583 ISHNKLYGEVPSDFDH---DLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 583 l~~N~l~g~~p~~~~~---~~~~~~~~~n~~~c~~~l 616 (973)
+++|+|++..|..+.. ......+.+||+.|+|.+
T Consensus 549 Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 549 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 8888888888876642 345566788888888754
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-49 Score=465.87 Aligned_cols=432 Identities=22% Similarity=0.239 Sum_probs=314.6
Q ss_pred CCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHh
Q 039922 145 ANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLW 224 (973)
Q Consensus 145 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 224 (973)
++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++.+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l---------------- 84 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKI---------------- 84 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEE----------------
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeec----------------
Confidence 4555555555555544444555555555555555555555555555555555555555554321
Q ss_pred hccCcccccCCccccCCCCCCEEEccCCcccc-cCCcCCCCCCCCCEEEccCCcCcccCchhccCCCcc--ceeeccccc
Q 039922 225 AAKANLIGEIPDSIGKLAFLSNLDLSDNFLSG-KIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTL--LRLDISQNN 301 (973)
Q Consensus 225 l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~Ls~N~ 301 (973)
|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| +.|++++|.
T Consensus 85 ----------p~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~ 149 (520)
T 2z7x_B 85 ----------SCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGE 149 (520)
T ss_dssp ----------ECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECT
T ss_pred ----------Ccc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccc
Confidence 111 34445555555555544 234555555555555555555543 234444444 666666666
Q ss_pred c--CCCChhhhhcc--cCcEEEccCCcCCCCCCc-cccCCCccceeeecccc-------ccCCCCCCccCCCCccceeee
Q 039922 302 L--TGNLPETIAAM--SLESLNLNDNYFTGEIPE-SLASNPNLVQLKLFNNS-------FSGKLPDDLGKYSNLEYFDVS 369 (973)
Q Consensus 302 l--~~~~~~~~~~~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~Ls 369 (973)
+ ++..|..+... ....+++++|.+.+.++. .+..+++|+.|++++|. +.+.+| .++.+++|+.|+++
T Consensus 150 l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~ 228 (520)
T 2z7x_B 150 TYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLN 228 (520)
T ss_dssp TTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEE
T ss_pred ccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccc
Confidence 6 55555554443 244566777777665544 56788899999999987 666666 78889999999999
Q ss_pred cccccccCCcccc---ccCCchhhhcccCccCCCCCCcc-----CCcceeeEEEccCCccccccC-cccCCC---CCccE
Q 039922 370 TNDFTGELPRFLC---FRNKLQCIIIFNNRFSGKIPESY-----GECKTLNYLRFGGNELQGELP-SKFWGL---PEVDF 437 (973)
Q Consensus 370 ~N~l~~~~~~~~~---~l~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~ 437 (973)
+|.+++..+..+. ..++|+.|++++|++.+.+|..+ +.+++|+.+++++|.+ .+| ..+..+ ++|+.
T Consensus 229 ~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~ 306 (520)
T 2z7x_B 229 NIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKN 306 (520)
T ss_dssp EEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSE
T ss_pred ccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeE
Confidence 9988764332221 24589999999999998899988 9999999999999999 444 455544 68999
Q ss_pred EEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccC--CCccccccccccceeecccc
Q 039922 438 FEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSG--HLPTCITQLNKLQQLELQEN 515 (973)
Q Consensus 438 L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N 515 (973)
|++++|++.... .+..+++|++|++++|++++.+|..++.+++|++|+|++|++++ .+|..++.+++|++|+|++|
T Consensus 307 L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N 384 (520)
T 2z7x_B 307 FTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384 (520)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSS
T ss_pred EEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCC
Confidence 999999987432 12788999999999999999999999999999999999999996 56688999999999999999
Q ss_pred ccccccCc-ccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCC
Q 039922 516 MFTGELPR-NLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVP 593 (973)
Q Consensus 516 ~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p 593 (973)
++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|||++|+++ .+|..+..+ .|+.|++++|+++ .+|
T Consensus 385 ~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~ 460 (520)
T 2z7x_B 385 SVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVP 460 (520)
T ss_dssp CCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCC
T ss_pred cCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccC
Confidence 99985665 488999999999999999988887765 79999999999999 899988888 9999999999999 566
Q ss_pred CC-Cc--ccccccccCCCCCCCCCCC
Q 039922 594 SD-FD--HDLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 594 ~~-~~--~~~~~~~~~~n~~~c~~~l 616 (973)
.. +. .......+.+|+..|.++.
T Consensus 461 ~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 461 DGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HHHhccCCcccEEECcCCCCcccCCc
Confidence 65 43 2355667899999998765
No 26
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.9e-49 Score=426.82 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=209.6
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.+.|+..+.||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+++..|+||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456888899999999999999986 79999999995432 233456889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
|||++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 999999999998753 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... ...+....+.......
T Consensus 224 ~~----~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~-------- 289 (346)
T 4fih_A 224 VP----RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPR-------- 289 (346)
T ss_dssp SC----CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCC--------
T ss_pred CC----cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCC--------
Confidence 22 234578999999999999999999999999999999999999999753 3333344333321110
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+. .......++.+++.+|+++||++|||+.|+++|
T Consensus 290 --------~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 --------LK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp --------CS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --------CC---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 001123567899999999999999999999886
No 27
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-48 Score=422.92 Aligned_cols=269 Identities=26% Similarity=0.298 Sum_probs=203.9
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC----eeEE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD----FNIL 757 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 757 (973)
++|...+.||+|+||+||+|++. |+.||||++... ......+++|+..+.+++|||||++++++.+++ ..|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 45777889999999999999985 899999999422 222333455677778899999999999997653 5799
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEeCCCCCCEEeCCCCceEEeccCc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC-----VPAIVHRDVKSHNILLDAEMVPRVADFGL 832 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 832 (973)
|||||++|+|.++++.. .++|..+.+++.|++.||+|||+++ .++|+||||||+|||+++++.+||+|||+
T Consensus 79 V~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 99999999999999764 4899999999999999999999762 45899999999999999999999999999
Q ss_pred chhccccCCCccccccccccccCccccccccCC------CCCCCCChhhHHHHHHHHHcCCCCCCCCCC----------C
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK------KVTEKSDVYSFGVVLMELVTGKRPNDPSFG----------E 896 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg~~p~~~~~~----------~ 896 (973)
++.................||+.|||||++.+. .++.++|||||||++|||+||+.|+..... .
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 987765443222233456799999999998754 467799999999999999999877643211 1
Q ss_pred chhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 897 NKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
....... ...... +..+|.+.......+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 235 ~~~~~~~-~~~~~~-----------~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 235 DPSVEEM-RKVVCE-----------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp SCCHHHH-HHHHTT-----------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cchHHHH-HHHHhc-----------ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1111111 111111 1122222222233456778999999999999999999999999998754
No 28
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-48 Score=416.33 Aligned_cols=247 Identities=26% Similarity=0.356 Sum_probs=201.2
Q ss_pred CccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec----CCeeEEEE
Q 039922 685 TEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG----QDFNILVY 759 (973)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 759 (973)
+..++||+|+||+||+|++. +++.||+|++..........+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999976 68999999997665556667789999999999999999999999864 35679999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEeCCCCCCEEeCC-CCceEEeccCcchhc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPA--IVHRDVKSHNILLDA-EMVPRVADFGLAKAL 836 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~DfGl~~~~ 836 (973)
|||++|+|.++++... .+++..+..++.||+.||+|||++ + |+||||||+|||++. ++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999998654 589999999999999999999998 6 999999999999984 799999999999754
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
.. .......||+.|||||++.+ +|+.++|||||||++|||+||+.||.... ....+...+...... .
T Consensus 183 ~~------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-~~~~~~~~i~~~~~~---~-- 249 (290)
T 3fpq_A 183 RA------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKP---A-- 249 (290)
T ss_dssp CT------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCC---G--
T ss_pred CC------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-cHHHHHHHHHcCCCC---C--
Confidence 22 12345689999999998865 69999999999999999999999996432 223333332221111 0
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. +++ ....++.+++.+||++||++|||+.|+++|
T Consensus 250 --~----~~~---------~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 250 --S----FDK---------VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --G----GGG---------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --C----CCc---------cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 111 112457889999999999999999999986
No 29
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.8e-48 Score=423.24 Aligned_cols=254 Identities=22% Similarity=0.269 Sum_probs=204.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.+.|+..++||+|+||+||+|+++ +|+.||||++..... ..+|+.++++++|||||++++++.+++..|+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 345778889999999999999986 799999999964322 246999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC-ceEEeccCcchhccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM-VPRVADFGLAKALQS 838 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGl~~~~~~ 838 (973)
|||++|+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ ++||+|||+|+.+..
T Consensus 130 Ey~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999998654 589999999999999999999999 999999999999999987 699999999987754
Q ss_pred cCCCc-cccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 839 QEGQS-DDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 839 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
..... ........||+.|||||++.+..|+.++||||+||++|||++|+.||.... ...+...+......
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~--~~~~~~~i~~~~~~------- 274 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF--RGPLCLKIASEPPP------- 274 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC--CSCCHHHHHHSCCG-------
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHcCCCC-------
Confidence 33211 112234679999999999999999999999999999999999999997642 22233333222110
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhh
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRV 968 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 968 (973)
..++ .+.....+.+++.+|+++||++|||+.|++++|..
T Consensus 275 --~~~~----------~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 275 --IREI----------PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp --GGGS----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --chhc----------CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 0000 01223567889999999999999999999998865
No 30
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-48 Score=419.08 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=210.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||+||+|+.+ +|+.||+|++.+.. ......+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 356899999999999999999976 79999999995432 1223456789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999998654 589999999999999999999999 999999999999999999999999999987754
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
... .......+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..++.+.+.......+
T Consensus 185 ~~~--~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~p------ 254 (311)
T 4aw0_A 185 ESK--QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEGLIFAKIIKLEYDFP------ 254 (311)
T ss_dssp TTT--CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC------
T ss_pred CCC--cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC------
Confidence 332 12234578999999999999999999999999999999999999999753 34444444444322110
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVV 963 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl 963 (973)
.....++.+++.+|+++||++|||+.|+.
T Consensus 255 ----------------~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 255 ----------------EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ----------------TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ----------------cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 01124678999999999999999999863
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8e-48 Score=407.55 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=195.1
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|++.+.||+|+||+||+|+.+ +|+.||+|++.+... .....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 3578999999999999999999975 799999999965532 23445678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+ +|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+...
T Consensus 91 vmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 99999 689999997653 589999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
... ......||+.|||||++.+..+ +.++||||+||++|||++|+.||... ....+.+.+.......+
T Consensus 164 ~~~-----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--~~~~~~~~i~~~~~~~p---- 232 (275)
T 3hyh_A 164 DGN-----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVYTLP---- 232 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC----
T ss_pred CCC-----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCC----
Confidence 332 2334689999999999998876 57999999999999999999999752 33444444443322110
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.....++.+++.+|+++||++|||++|++++
T Consensus 233 ------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 ------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0113567889999999999999999999985
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.3e-47 Score=468.72 Aligned_cols=369 Identities=18% Similarity=0.257 Sum_probs=326.8
Q ss_pred chhHHHhhcc--CcccccCCccccCCCCCCEEEccCCcccc-----------------cCCcCCC--CCCCCCEEEccCC
Q 039922 218 SKLENLWAAK--ANLIGEIPDSIGKLAFLSNLDLSDNFLSG-----------------KIPHSFS--GLASIEQIELFDN 276 (973)
Q Consensus 218 ~~L~~L~l~~--n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----------------~~~~~~~--~l~~L~~L~L~~n 276 (973)
..++.+.+.. |++.+ +|..++++++|++|+|++|.+++ .+|..++ ++++|++|+|++|
T Consensus 423 l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred cchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 3455555544 78888 89999999999999999999998 3899988 9999999999999
Q ss_pred cCcccCchhccCCCccceeeccccc-cCC-CChhhhhcc--------cCcEEEccCCcCCCCCCc--cccCCCccceeee
Q 039922 277 QLSGELPESLSNLTTLLRLDISQNN-LTG-NLPETIAAM--------SLESLNLNDNYFTGEIPE--SLASNPNLVQLKL 344 (973)
Q Consensus 277 ~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~~~~~~~~--------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L 344 (973)
++.+.+|..+.++++|+.|+|++|+ +++ .+|..+... +|+.|+|++|+++ .+|. .+.++++|+.|+|
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEEC
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEEC
Confidence 9999999999999999999999998 888 788766543 7999999999999 8888 9999999999999
Q ss_pred ccccccCCCCCCccCCCCccceeeecccccccCCccccccCC-chhhhcccCccCCCCCCccCCcce--eeEEEccCCcc
Q 039922 345 FNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNK-LQCIIIFNNRFSGKIPESYGECKT--LNYLRFGGNEL 421 (973)
Q Consensus 345 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~N~l 421 (973)
++|+++ .+| .++.+++|+.|+|++|+++ .+|..+..+++ |+.|++++|++. .+|..+..++. |++|++++|++
T Consensus 581 s~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l 656 (876)
T 4ecn_A 581 VHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKI 656 (876)
T ss_dssp TTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred CCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcC
Confidence 999999 888 8999999999999999999 88988999999 999999999999 78888887765 99999999999
Q ss_pred ccccCccc---C--CCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcC--------CcCcEEeC
Q 039922 422 QGELPSKF---W--GLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTL--------RQLQAVDL 488 (973)
Q Consensus 422 ~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l--------~~L~~L~L 488 (973)
.+.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+|++|+++ .+|..+... ++|+.|+|
T Consensus 657 ~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~L 735 (876)
T 4ecn_A 657 GSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDL 735 (876)
T ss_dssp TTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEEC
T ss_pred CCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEEC
Confidence 98776433 2 4558999999999999544444558999999999999999 667655443 39999999
Q ss_pred cCCcccCCCccccc--cccccceeeccccccccccCcccCccccceeeeecc------CcccCCCCccccccccccEEec
Q 039922 489 SQNRFSGHLPTCIT--QLNKLQQLELQENMFTGELPRNLNSLTALIVLNLST------NQLTGTIPPELGNLAVLTSLDL 560 (973)
Q Consensus 489 s~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~L 560 (973)
++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|
T Consensus 736 s~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~L 813 (876)
T 4ecn_A 736 RFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQI 813 (876)
T ss_dssp CSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEEC
T ss_pred CCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEEC
Confidence 999999 7898887 99999999999999997 899999999999999976 8899999999999999999999
Q ss_pred CCCcCccccChhhhcccccceeccCCcCcccCCCCCc
Q 039922 561 SSNLLTGEIPLELTKLKLNQFNISHNKLYGEVPSDFD 597 (973)
Q Consensus 561 s~N~l~~~~p~~l~~l~l~~l~l~~N~l~g~~p~~~~ 597 (973)
++|++ +.+|..+.. .|+.|+|++|++...-+..+.
T Consensus 814 s~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~~~~~ 848 (876)
T 4ecn_A 814 GSNDI-RKVDEKLTP-QLYILDIADNPNISIDVTSVC 848 (876)
T ss_dssp CSSCC-CBCCSCCCS-SSCEEECCSCTTCEEECGGGH
T ss_pred CCCCC-CccCHhhcC-CCCEEECCCCCCCccChHHcc
Confidence 99999 799998664 899999999999876665553
No 33
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=428.39 Aligned_cols=253 Identities=20% Similarity=0.302 Sum_probs=211.0
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
+..+.|+..+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|+.+|++++|||||+++++|.+++..|+
T Consensus 148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~i 225 (423)
T 4fie_A 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 225 (423)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEE
Confidence 34567999999999999999999986 79999999996443 2334568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
|||||++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 226 VmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred EEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999999998753 489999999999999999999999 99999999999999999999999999998765
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... ...+....+......
T Consensus 299 ~~~~----~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~------- 365 (423)
T 4fie_A 299 KEVP----RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPP------- 365 (423)
T ss_dssp SSCC----CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC-------
T ss_pred CCCc----cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCC-------
Confidence 4322 234578999999999999999999999999999999999999999752 333334433332111
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+.. .......+.+++.+||++||++|||+.|+++|
T Consensus 366 ---------~~~~---~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 366 ---------RLKN---LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ---------CCSC---TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---------CCcc---cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 01123567899999999999999999999886
No 34
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-47 Score=423.02 Aligned_cols=261 Identities=27% Similarity=0.369 Sum_probs=213.0
Q ss_pred cCCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCC-CCeeeEEeEEec-C
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRH-GNVVKLLMCCSG-Q 752 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~-~ 752 (973)
.++|+..+.||+|+||+||+|++. .++.||||++.... .....+.|.+|++++++++| ||||+++++|.+ +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 457888999999999999999865 23579999996433 34456779999999999976 899999999976 4
Q ss_pred CeeEEEEeccCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGR-------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL 819 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 819 (973)
+..|+|||||++|+|.++++.... ...+++..++.++.|||+||+|||++ +||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceee
Confidence 578999999999999999975321 23589999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCch
Q 039922 820 DAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENK 898 (973)
Q Consensus 820 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~ 898 (973)
++++.+||+|||+|+.+...... .......||+.|||||++.++.|+.++|||||||++|||+| |+.||.... ...
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~--~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~-~~~ 295 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDY--VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-IDE 295 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-CSH
T ss_pred CCCCCEEECcchhhhhcccCCCc--eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC-HHH
Confidence 99999999999999876544321 22344678999999999999999999999999999999998 899997532 334
Q ss_pred hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 899 DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.+...+..+.....+. ....++.+++.+||+.||++||||.||+++|+..
T Consensus 296 ~~~~~i~~g~~~~~p~---------------------~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 296 EFCRRLKEGTRMRAPD---------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HHHHHHHHTCCCCCCT---------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCc---------------------cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 4555555443221111 1134678899999999999999999999999874
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.4e-48 Score=414.00 Aligned_cols=251 Identities=25% Similarity=0.318 Sum_probs=201.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
.++|++.+.||+|+||+||+|+.. +++.||+|++.+..........+.+|++++++++|||||++++++.+++..|
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 357999999999999999999863 4789999999654433334456888999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+|||||++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999998754 589999999999999999999999 9999999999999999999999999999865
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..... ......||+.|||||++.+..|+.++||||+||++|||+||+.||... +..++...+.......+
T Consensus 177 ~~~~~----~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~~~~~p---- 246 (304)
T 3ubd_A 177 IDHEK----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK--DRKETMTMILKAKLGMP---- 246 (304)
T ss_dssp ----C----CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC----
T ss_pred cCCCc----cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc--CHHHHHHHHHcCCCCCC----
Confidence 43322 234468999999999999999999999999999999999999999753 33444444433221110
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPS-----MRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 965 (973)
.....++.+++.+|+++||++||| ++|+++|
T Consensus 247 ------------------~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 247 ------------------QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ------------------TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ------------------CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 011356789999999999999998 4677764
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.7e-45 Score=447.40 Aligned_cols=508 Identities=22% Similarity=0.215 Sum_probs=331.7
Q ss_pred ceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEEC
Q 039922 73 SVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDL 152 (973)
Q Consensus 73 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L 152 (973)
.++.|||+++.+++..+.+|.++++|++|||++|+|+ .+++.+|.++++|++|+|++|++.+..+..|.++++|++|+|
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 5889999999999888889999999999999999998 677889999999999999999999888889999999999999
Q ss_pred cCCcCCCCCCcccCCCCcccEEecCCcccCCc-ccccccccccccEeeccCcCCCCCCCCccccCcchhHH----Hhhcc
Q 039922 153 SRNNFSGDIPESFGRFPVLKVLNLGGNLLSGL-IPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLEN----LWAAK 227 (973)
Q Consensus 153 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~----L~l~~ 227 (973)
++|++++..+..|+++++|++|+|++|++++. .|..++++++|++|+|++|+++.+ .+..+..+.+++. ++++.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI-YCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE-CGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc-ccccccchhhhhhhhhhhhccc
Confidence 99999988788899999999999999999864 688999999999999999999875 3556666665553 45666
Q ss_pred CcccccCCccccCCCCCCEEEccCCcccc-cCCcCCCCCCCCCEEEccCCc------CcccCchhccCCCccceeecccc
Q 039922 228 ANLIGEIPDSIGKLAFLSNLDLSDNFLSG-KIPHSFSGLASIEQIELFDNQ------LSGELPESLSNLTTLLRLDISQN 300 (973)
Q Consensus 228 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~------l~~~~p~~l~~l~~L~~L~Ls~N 300 (973)
|.+....+.. .....++.+++++|.... ..+..+.++..++...+..+. +.......+..+..+...++..+
T Consensus 211 n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 6666554443 344567788888886653 233455666666665553322 22223334444445555554444
Q ss_pred ccCCCCh---hhhh-cccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeeccccccc
Q 039922 301 NLTGNLP---ETIA-AMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGE 376 (973)
Q Consensus 301 ~l~~~~~---~~~~-~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 376 (973)
....... ..+. ..+++.+.+.+|.+.... .+....+|+.|++.+|.+.+..+ ..+..|+.++++.|.+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC
Confidence 3322111 1111 124666666666554322 23344556666666666653322 2344555666666655432
Q ss_pred CCccccccCCchhhhcccCccCC--CCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCC-CCC
Q 039922 377 LPRFLCFRNKLQCIIIFNNRFSG--KIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSIS-PSI 453 (973)
Q Consensus 377 ~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 453 (973)
. ....+++|+.+++++|.+.. ..+..+..+.+|+++++..|.+.. .+..+..+++|+.+++..|......+ ..+
T Consensus 365 ~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~ 441 (635)
T 4g8a_A 365 F--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 441 (635)
T ss_dssp C--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTT
T ss_pred c--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccc
Confidence 2 23345566666666665542 233344455566666666666553 33445566666666666555544333 345
Q ss_pred CCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcc-cCCCccccccccccceeeccccccccccCcccCccccce
Q 039922 454 SNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRF-SGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALI 532 (973)
Q Consensus 454 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 532 (973)
..+++++.++++.|.+.+..+..+..+++|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|+
T Consensus 442 ~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~ 521 (635)
T 4g8a_A 442 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 521 (635)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCC
Confidence 5566666666666666666666666666666666666653 234555666666666666666666666666666666666
Q ss_pred eeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc--cccceeccCCcCccc
Q 039922 533 VLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL--KLNQFNISHNKLYGE 591 (973)
Q Consensus 533 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~l~~l~l~~N~l~g~ 591 (973)
+|+|++|+|++..|..|.++++|++|||++|+|++..|..+..+ +|+.|++++|++++.
T Consensus 522 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 522 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp EEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred EEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 66666666665555566666666666666666666666666554 466666666666553
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.1e-46 Score=404.68 Aligned_cols=255 Identities=21% Similarity=0.325 Sum_probs=192.4
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC-------
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD------- 753 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 753 (973)
++|+..+.||+|+||+||+|+.+ +|+.||||++.... .....+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45788899999999999999976 79999999996443 3445567899999999999999999999986543
Q ss_pred -----eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEe
Q 039922 754 -----FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVA 828 (973)
Q Consensus 754 -----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 828 (973)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999998765444566777899999999999999999 99999999999999999999999
Q ss_pred ccCcchhccccCCCc--------cccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhH
Q 039922 829 DFGLAKALQSQEGQS--------DDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDI 900 (973)
Q Consensus 829 DfGl~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~ 900 (973)
|||+|+.+....... .......+||+.|||||++.+..|+.++||||+||++|||++ ||.. ..+.
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~----~~~~ 233 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST----QMER 233 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS----HHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC----ccHH
Confidence 999998875443211 112234679999999999999999999999999999999996 7653 1222
Q ss_pred HHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 901 VRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...+........+. ..........+++.+|+++||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~p~------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTLTDVRNLKFPP------------------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHTTCCCH------------------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhcCCCCC------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 22222211110000 002233456789999999999999999999875
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.6e-46 Score=441.81 Aligned_cols=456 Identities=19% Similarity=0.222 Sum_probs=267.4
Q ss_pred eEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcC
Q 039922 75 DGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSR 154 (973)
Q Consensus 75 ~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~ 154 (973)
..+|++++++++ +|..+. ++|++|+|++|+++ .+++.+|.++++|++|+|++|.+++..|+.|..+++|++|||++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 568999999986 776654 89999999999998 56667899999999999999999988899999999999999999
Q ss_pred CcCCCCCCcccCCCCcccEEecCCcccCCc-ccccccccccccEeeccCcCCCCCCCCccccCcchh--HHHhhccCcc-
Q 039922 155 NNFSGDIPESFGRFPVLKVLNLGGNLLSGL-IPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKL--ENLWAAKANL- 230 (973)
Q Consensus 155 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L--~~L~l~~n~l- 230 (973)
|+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|+++.. .+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC----chhhhhhceeeEEEeeccccc
Confidence 9998 56665 799999999999999874 468899999999999999988652 23333333 5555555555
Q ss_pred -cccCCccccCCC--CCCEEEccCCcccccCCc-CCCCCCCCCEEEccCCcCc----ccCchhccCCCccceeecccccc
Q 039922 231 -IGEIPDSIGKLA--FLSNLDLSDNFLSGKIPH-SFSGLASIEQIELFDNQLS----GELPESLSNLTTLLRLDISQNNL 302 (973)
Q Consensus 231 -~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~Ls~N~l 302 (973)
.+..|..+..+. .+ .+++++|.+.+.++. .+..+++|+.|++++|+.. ...+..+..+++|+.|+++++.+
T Consensus 183 ~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 444444444432 11 334444444433322 2334444444444444310 01112233344444444443333
Q ss_pred CCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCc-----cCCCCccceeeecccccccC
Q 039922 303 TGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDL-----GKYSNLEYFDVSTNDFTGEL 377 (973)
Q Consensus 303 ~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~ 377 (973)
++. .+.+ ++..+ ..++|++|++++|+++|.+|..+ .+++.|+.++++.|.+ .+
T Consensus 262 ~~~------------------~~~~-~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~ 319 (562)
T 3a79_B 262 TWK------------------CSVK-LFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LF 319 (562)
T ss_dssp CHH------------------HHHH-HHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SS
T ss_pred cHH------------------HHHH-HHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ec
Confidence 221 1110 11111 12366666666666666666655 5555555555555555 22
Q ss_pred C-ccccc---cCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCC--CC
Q 039922 378 P-RFLCF---RNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSI--SP 451 (973)
Q Consensus 378 ~-~~~~~---l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~ 451 (973)
| ..+.. ..+|+.|++++|.+.... ....+++|++|++++|++++..|..|.++++|+.|++++|++++.. |.
T Consensus 320 p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 397 (562)
T 3a79_B 320 SKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVAL 397 (562)
T ss_dssp CHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHH
T ss_pred ChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchh
Confidence 3 22211 134555555555543211 1145556666666666666555555556666666666666555422 23
Q ss_pred CCCCCCCcceEeecCCcCCCCCch-hhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCcccc
Q 039922 452 SISNAPKLTGILINGNNFTGEVPS-QICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTA 530 (973)
Q Consensus 452 ~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 530 (973)
.+..+++|+.|++++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++
T Consensus 398 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~ 474 (562)
T 3a79_B 398 MTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQA 474 (562)
T ss_dssp TTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCC
T ss_pred hhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCC
Confidence 455555555555555555543333 344555555555555555554444443 45555555555555 45554445555
Q ss_pred ceeeeeccCcccCCCCcc-ccccccccEEecCCCcCccccC
Q 039922 531 LIVLNLSTNQLTGTIPPE-LGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 531 L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
|+.|+|++|+|+ .+|.. |..+++|+.|+|++|++++..|
T Consensus 475 L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 475 LQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 555555555555 34443 5555555556666665555444
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1e-45 Score=441.21 Aligned_cols=456 Identities=21% Similarity=0.203 Sum_probs=341.2
Q ss_pred ccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEE
Q 039922 95 IRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVL 174 (973)
Q Consensus 95 l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 174 (973)
+...+++|+++|+++ .+|.... ++|++|+|++|.+.+..|..|..+++|++|+|++|++++..|+.|+++++|++|
T Consensus 30 ~~~~~~l~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 30 NELESMVDYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp ---CCEEECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred cCCCcEEEcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 344478888888887 4664332 677888888888777777777888888888888888877777777888888888
Q ss_pred ecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcc
Q 039922 175 NLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFL 254 (973)
Q Consensus 175 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 254 (973)
+|++|+++. +|.. .+++|++|+|++|+++.+++ |..++++++|++|++++|++
T Consensus 106 ~Ls~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~------------------------p~~~~~l~~L~~L~L~~n~l 158 (562)
T 3a79_B 106 DVSHNRLQN-ISCC--PMASLRHLDLSFNDFDVLPV------------------------CKEFGNLTKLTFLGLSAAKF 158 (562)
T ss_dssp ECTTSCCCE-ECSC--CCTTCSEEECCSSCCSBCCC------------------------CGGGGGCTTCCEEEEECSBC
T ss_pred ECCCCcCCc-cCcc--ccccCCEEECCCCCccccCc------------------------hHhhcccCcccEEecCCCcc
Confidence 888888773 4544 67778888888777765433 45566666777777777776
Q ss_pred cccCCcCCCCCCCC--CEEEccCCcC--cccCchhccCCC-ccceeeccccccCCCChhhhhc--ccCcEEEccCCcC--
Q 039922 255 SGKIPHSFSGLASI--EQIELFDNQL--SGELPESLSNLT-TLLRLDISQNNLTGNLPETIAA--MSLESLNLNDNYF-- 325 (973)
Q Consensus 255 ~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~--~~L~~L~L~~N~l-- 325 (973)
++. .+..+++| ++|++++|++ ++..|..+..+. ..-.+++++|.+.+.++..... .+|+.|++++|+.
T Consensus 159 ~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 235 (562)
T 3a79_B 159 RQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC 235 (562)
T ss_dssp CTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH
T ss_pred ccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccccccccc
Confidence 643 33444444 7777777777 666666666554 1224566777776655443221 2577777777742
Q ss_pred ---CCCCCccccCCCccceeeeccccccCCC----CCCccCCCCccceeeecccccccCCccc-----cccCCchhhhcc
Q 039922 326 ---TGEIPESLASNPNLVQLKLFNNSFSGKL----PDDLGKYSNLEYFDVSTNDFTGELPRFL-----CFRNKLQCIIIF 393 (973)
Q Consensus 326 ---~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~ 393 (973)
.+ ....+..+++|+.|+++++.+++.. +.. ...++|++|++++|+++|.+|..+ ..+..|+.+++.
T Consensus 236 ~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~ 313 (562)
T 3a79_B 236 QRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVK 313 (562)
T ss_dssp HHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEE
T ss_pred chHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhcc
Confidence 21 2235677788888888888776431 111 123589999999999999888887 777778778887
Q ss_pred cCccCCCCC-CccCCc---ceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcC
Q 039922 394 NNRFSGKIP-ESYGEC---KTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNF 469 (973)
Q Consensus 394 ~n~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l 469 (973)
.|.+ .+| ..+..+ .+|++|++++|.+.... ....+++|+.|++++|++++.+|..+..+++|++|++++|++
T Consensus 314 ~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 389 (562)
T 3a79_B 314 NQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL 389 (562)
T ss_dssp ECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCC
T ss_pred ccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCc
Confidence 7777 344 223222 57999999999986433 226889999999999999999999999999999999999999
Q ss_pred CCC--CchhhhcCCcCcEEeCcCCcccCCCcc-ccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCC
Q 039922 470 TGE--VPSQICTLRQLQAVDLSQNRFSGHLPT-CITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIP 546 (973)
Q Consensus 470 ~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 546 (973)
++. +|..+..+++|++|++++|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|
T Consensus 390 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip 466 (562)
T 3a79_B 390 KNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIP 466 (562)
T ss_dssp CBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCC
T ss_pred CCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccC
Confidence 973 456789999999999999999985554 588999999999999999988887765 78999999999998 788
Q ss_pred ccccccccccEEecCCCcCccccChh-hhcc-cccceeccCCcCcccCCC
Q 039922 547 PELGNLAVLTSLDLSSNLLTGEIPLE-LTKL-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 547 ~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l-~l~~l~l~~N~l~g~~p~ 594 (973)
..+..+++|++|+|++|+++ .+|.. +..+ .|+.|++++|+++|.+|.
T Consensus 467 ~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 467 KDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 88889999999999999999 67777 7777 899999999999987764
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-45 Score=407.52 Aligned_cols=277 Identities=17% Similarity=0.221 Sum_probs=211.0
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec------C
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG------Q 752 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~ 752 (973)
+.++|++.+.||+|+||+||+|+++ +|+.||||++..........+.+.+|+++|+.++|||||++++++.. .
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 3467999999999999999999986 79999999997666556666788999999999999999999998754 3
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCc
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGL 832 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 832 (973)
+..|+|||||+ |+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 57799999995 78999987643 589999999999999999999999 999999999999999999999999999
Q ss_pred chhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
++.+..............+||+.|+|||++.+. .++.++||||+||++|||++|+.||... +..+....+.......
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--~~~~~l~~I~~~~g~p 282 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQLQLIMMVLGTP 282 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--SHHHHHHHHHHHHCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--CHHHHHHHHHHhcCCC
Confidence 987754433333345567899999999998775 5689999999999999999999999753 3334444444333221
Q ss_pred CCccccC----cccccccCCCCCCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 912 PERGCCR----DLNQLIDPRMDLSTCD-----YEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 912 ~~~~~~~----~l~~~~d~~l~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+...... .....+.......... +....++.+++.+|+++||++|||+.|+++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 1111000 0000000000000000 0113567899999999999999999999876
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.9e-43 Score=390.79 Aligned_cols=204 Identities=25% Similarity=0.378 Sum_probs=172.0
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecC
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQ 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 752 (973)
..+.++|++.+.||+|+||+||+|+.+ +++.||+|++.+. .....+.+|+++++.+ +|||||++++++.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 345678999999999999999999864 4678999998533 2345578899999998 699999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC-CceEEeccC
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE-MVPRVADFG 831 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG 831 (973)
+..|+||||+++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 99999999999999999884 378999999999999999999999 99999999999999877 799999999
Q ss_pred cchhccccCCC------------------------ccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcC
Q 039922 832 LAKALQSQEGQ------------------------SDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTG 886 (973)
Q Consensus 832 l~~~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg 886 (973)
+|+........ ........+||+.|+|||++.+. .++.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 99765432210 01123446799999999998775 589999999999999999999
Q ss_pred CCCCCCCC
Q 039922 887 KRPNDPSF 894 (973)
Q Consensus 887 ~~p~~~~~ 894 (973)
+.||....
T Consensus 244 ~~Pf~~~~ 251 (361)
T 4f9c_A 244 RYPFYKAS 251 (361)
T ss_dssp CSSSSCCS
T ss_pred CCCCCCCC
Confidence 99997653
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.2e-41 Score=395.71 Aligned_cols=380 Identities=21% Similarity=0.229 Sum_probs=245.1
Q ss_pred cEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcc-cccccccccccEeeccC
Q 039922 124 QVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLI-PSFLGNLTELTHFELGY 202 (973)
Q Consensus 124 ~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~ 202 (973)
+.++.+++.+. .+|. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 35666666654 3444 2 267788888888887777777778888888888887776443 45677777777777777
Q ss_pred cCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcC--CCCCCCCCEEEccCCcCcc
Q 039922 203 NPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHS--FSGLASIEQIELFDNQLSG 280 (973)
Q Consensus 203 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~n~l~~ 280 (973)
|+++ +..|..++++++|++|+|++|.+++..+.. |.++++|++|++++|++++
T Consensus 89 n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 143 (455)
T 3v47_A 89 NQFL-------------------------QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKK 143 (455)
T ss_dssp CTTC-------------------------EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCS
T ss_pred CccC-------------------------ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCc
Confidence 7653 344667777888888888888887654444 7788888888888888887
Q ss_pred cCchh-ccCCCccceeeccccccCCCChhhhhc---ccCcEEEccCCcCCCCCCccc--------cCCCccceeeecccc
Q 039922 281 ELPES-LSNLTTLLRLDISQNNLTGNLPETIAA---MSLESLNLNDNYFTGEIPESL--------ASNPNLVQLKLFNNS 348 (973)
Q Consensus 281 ~~p~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~---~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~ 348 (973)
..|.. +.++++|++|++++|.+++..+..+.. .+|+.|++++|.+.+..+..+ ..+++|++|++++|+
T Consensus 144 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~ 223 (455)
T 3v47_A 144 IQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNG 223 (455)
T ss_dssp CCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSC
T ss_pred cCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCc
Confidence 66665 677788888888888877766665543 246666666666664433322 133444444444444
Q ss_pred ccCCCCCCccCC---CCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCcccccc
Q 039922 349 FSGKLPDDLGKY---SNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGEL 425 (973)
Q Consensus 349 l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 425 (973)
+++..|..+... ++|+.|++++|.+.+.. +..+.+.+..
T Consensus 224 l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------------------------------~~~~~~~~~~ 265 (455)
T 3v47_A 224 FKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------------------------------FGHTNFKDPD 265 (455)
T ss_dssp CCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------------------------------TTCCSSCCCC
T ss_pred ccccchhhhhccccccceeeEeeccccccccc--------------------------------------cchhhhccCc
Confidence 444433333222 34444444444332210 0111122122
Q ss_pred CcccCC--CCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCcccccc
Q 039922 426 PSKFWG--LPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQ 503 (973)
Q Consensus 426 ~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 503 (973)
+..+.. .++|+.|++++|++.+..|..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++..|..|+.
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 222222 245566666666666555666666666777777777776666667777777777777777777666777777
Q ss_pred ccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccC
Q 039922 504 LNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++.+|
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7777777777777777777777777778888888887776555566777788888888888877776
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.6e-42 Score=397.72 Aligned_cols=386 Identities=25% Similarity=0.309 Sum_probs=206.7
Q ss_pred CcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcc-------------cEEecCCcccCCcc
Q 039922 119 PCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVL-------------KVLNLGGNLLSGLI 185 (973)
Q Consensus 119 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~ 185 (973)
..++|++|++++|.+ +.+|..++.+++|++|++++|.+.|.+|.+++.+++| ++|++++|++++.
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l- 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL- 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-
Confidence 356788888888888 7888888888888888888888888888888888776 6666666666542
Q ss_pred cccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCC
Q 039922 186 PSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGL 265 (973)
Q Consensus 186 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 265 (973)
|.. .++|++|++++|.++. +|.. +++|++|++++|++++ +|.. .
T Consensus 87 p~~---~~~L~~L~l~~n~l~~--------------------------lp~~---~~~L~~L~l~~n~l~~-l~~~---~ 130 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE--------------------------LPEL---PQSLKSLLVDNNNLKA-LSDL---P 130 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS--------------------------CCCC---CTTCCEEECCSSCCSC-CCSC---C
T ss_pred CCC---cCCCCEEEccCCcCCc--------------------------cccc---cCCCcEEECCCCccCc-ccCC---C
Confidence 221 2455666666665544 3322 2456666666666663 2211 1
Q ss_pred CCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeec
Q 039922 266 ASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLF 345 (973)
Q Consensus 266 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 345 (973)
++|++|++++|++++ +| .++++++|++|++++|++++ +|... .+|++|++++|++++ +| .+..+++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 466666666666664 45 46666666666666666664 33322 256677777776664 44 46666777777777
Q ss_pred cccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCcccccc
Q 039922 346 NNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGEL 425 (973)
Q Consensus 346 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 425 (973)
+|++++ +|... ++|++|++++|+++ .+|. +..+++|+.|++++|++.+ +|.. .++|++|++++|++++ +
T Consensus 204 ~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l 272 (454)
T 1jl5_A 204 NNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-L 272 (454)
T ss_dssp SSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-c
Confidence 777664 33322 46667777777666 4453 6666667777777776664 3332 3567777777777765 3
Q ss_pred CcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcC-CcCcEEeCcCCcccCCCccccccc
Q 039922 426 PSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTL-RQLQAVDLSQNRFSGHLPTCITQL 504 (973)
Q Consensus 426 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l 504 (973)
|.. .++|+.|++++|++++... -.++|+.|++++|.+++ ++ .+ ++|++|++++|++++ +|.. +
T Consensus 273 ~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~ 336 (454)
T 1jl5_A 273 PEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---P 336 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---C
T ss_pred Ccc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---C
Confidence 332 3667777777777765211 12567777777777764 22 22 467777777777774 5544 3
Q ss_pred cccceeeccccccccccCcccCccccceeeeeccCcccC--CCCccccccccccEEecCCCcCccccChhhhccccccee
Q 039922 505 NKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTG--TIPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFN 582 (973)
Q Consensus 505 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~ 582 (973)
++|+.|++++|+++ .+|. .+++|+.|+|++|++++ .+|.++..+ +.|++.|.+|..+. +|+.|+
T Consensus 337 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~~~--~L~~L~ 402 (454)
T 1jl5_A 337 PRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPELPQ--NLKQLH 402 (454)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC------------------
T ss_pred CcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccccC--cCCEEE
Confidence 66777777777777 4555 35677777777777776 566665544 22444444443211 344455
Q ss_pred ccCCcCcc
Q 039922 583 ISHNKLYG 590 (973)
Q Consensus 583 l~~N~l~g 590 (973)
+++|+++|
T Consensus 403 ls~N~l~~ 410 (454)
T 1jl5_A 403 VETNPLRE 410 (454)
T ss_dssp --------
T ss_pred CCCCcCCc
Confidence 55555544
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9e-42 Score=396.67 Aligned_cols=363 Identities=20% Similarity=0.180 Sum_probs=238.9
Q ss_pred cccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccC-CccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEE
Q 039922 96 RTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGEL-PDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVL 174 (973)
Q Consensus 96 ~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 174 (973)
++|++|||++|.+++ +++..|+++++|++|+|++|.+.+.+ +..|..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCE-ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CccCEEEecCCccCc-CChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 567788888887773 44456777888888888888776444 5567778888888888888877777778888888888
Q ss_pred ecCCcccCCccccc--ccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCcc-ccCCCCCCEEEccC
Q 039922 175 NLGGNLLSGLIPSF--LGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDS-IGKLAFLSNLDLSD 251 (973)
Q Consensus 175 ~L~~n~l~~~~p~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~Ls~ 251 (973)
+|++|++++..|.. |+++++|++|+|++|.++... |.. ++++++|++|++++
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-------------------------~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQ-------------------------PASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCC-------------------------CCGGGGGCTTCCEEECTT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccC-------------------------cccccCCCCcccEEeCCC
Confidence 88888887654444 777888888888887775431 222 44455555555555
Q ss_pred CcccccCCcCCCCC--CCCCEEEccCCcCcccCchh--------ccCCCccceeeccccccCCCChhhhhc----ccCcE
Q 039922 252 NFLSGKIPHSFSGL--ASIEQIELFDNQLSGELPES--------LSNLTTLLRLDISQNNLTGNLPETIAA----MSLES 317 (973)
Q Consensus 252 N~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~--------l~~l~~L~~L~Ls~N~l~~~~~~~~~~----~~L~~ 317 (973)
|.+++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|++++|++++..|..+.. .+|+.
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 55555555555444 45555555555555433222 224456666666666666555554432 35666
Q ss_pred EEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccC--CCCccceeeecccccccCCccccccCCchhhhcccC
Q 039922 318 LNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGK--YSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNN 395 (973)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 395 (973)
|++++|.+.+... ..+.+.+..+..+.. .++|++|++++|++++.+|..+..+++|+.|++++|
T Consensus 244 L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 309 (455)
T 3v47_A 244 LILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQN 309 (455)
T ss_dssp EECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred Eeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCC
Confidence 6666665543211 111122112222222 245556666666666555555666666666666666
Q ss_pred ccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCch
Q 039922 396 RFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPS 475 (973)
Q Consensus 396 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 475 (973)
++.+..|..+..+++|++|++++|.+++..+..|.++++|+.|++++|++++..|..+..+++|++|++++|++++..+.
T Consensus 310 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 389 (455)
T 3v47_A 310 EINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDG 389 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHh
Confidence 66666666777777788888888888777777788888888888888888877788888888888888888888876666
Q ss_pred hhhcCCcCcEEeCcCCcccCCCc
Q 039922 476 QICTLRQLQAVDLSQNRFSGHLP 498 (973)
Q Consensus 476 ~~~~l~~L~~L~Ls~N~l~~~~p 498 (973)
.+..+++|++|++++|++++..|
T Consensus 390 ~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 390 IFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTCTTCCEEECCSSCBCCCTT
T ss_pred HhccCCcccEEEccCCCcccCCC
Confidence 77888888888888888887666
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1e-41 Score=392.79 Aligned_cols=418 Identities=23% Similarity=0.311 Sum_probs=214.8
Q ss_pred ceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEEC
Q 039922 73 SVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDL 152 (973)
Q Consensus 73 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L 152 (973)
++..|+++++.+ |.+|++++++++|++|++++|.+.|.+|. .++.+.+|+.+++..|.. .++++|++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPP-GNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCT-TSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCc-ccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 455666777766 66777777777777777777776666553 466666665555554432 35688888
Q ss_pred cCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccc
Q 039922 153 SRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIG 232 (973)
Q Consensus 153 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 232 (973)
++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|+++.++ .. .++|++|++++|++.+
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~--~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALS--DL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCC--SC---CTTCCEEECCSSCCSS
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCccc--CC---CCCCCEEECcCCCCCC
Confidence 8888885 4442 3678888888888887 5543 378888888888886532 11 1355555555555554
Q ss_pred cCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhc
Q 039922 233 EIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAA 312 (973)
Q Consensus 233 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 312 (973)
+| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|.+++ +|...
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-- 214 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-- 214 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--
Confidence 44 35666666666666666653 34332 356666666666654 34 45566666666666666654 22211
Q ss_pred ccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhc
Q 039922 313 MSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIII 392 (973)
Q Consensus 313 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 392 (973)
.+|++|++++|+++ .+|. +..+++|++|++++|++++ +|.. +++|++|++++|+++
T Consensus 215 ~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~------------------ 270 (454)
T 1jl5_A 215 LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLT------------------ 270 (454)
T ss_dssp TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCS------------------
T ss_pred CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccc------------------
Confidence 24555555555555 3442 5555555555555555553 3321 244555555555544
Q ss_pred ccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCC-CCcceEeecCCcCCC
Q 039922 393 FNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNA-PKLTGILINGNNFTG 471 (973)
Q Consensus 393 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~L~~L~L~~N~l~~ 471 (973)
+ +|.. .++|++|++++|++++.. . -.++|+.|++++|++++.. .+ ++|+.|++++|++++
T Consensus 271 ------~-l~~~---~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~ 331 (454)
T 1jl5_A 271 ------D-LPEL---PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE 331 (454)
T ss_dssp ------C-CCCC---CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC
T ss_pred ------c-cCcc---cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccc
Confidence 3 2322 256677777777766521 1 1156777777777776421 22 478888888888885
Q ss_pred CCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeecccccccc--ccCcccCccccceeeeeccCcccCCCCccc
Q 039922 472 EVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTG--ELPRNLNSLTALIVLNLSTNQLTGTIPPEL 549 (973)
Q Consensus 472 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 549 (973)
+|.. +++|++|++++|+++ .+|. .+++|+.|+|++|++++ .+|.++.. |+.|.+.|.+|..
T Consensus 332 -lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~- 394 (454)
T 1jl5_A 332 -LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL- 394 (454)
T ss_dssp -CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------
T ss_pred -cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc-
Confidence 5543 578999999999998 5676 46889999999999997 67776653 3457777888874
Q ss_pred cccccccEEecCCCcCcc--ccChhhhcccccceeccCCcCcccCCC
Q 039922 550 GNLAVLTSLDLSSNLLTG--EIPLELTKLKLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 550 ~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~l~~l~l~~N~l~g~~p~ 594 (973)
+++|+.||+++|+++| .+|.++ +.|.+.+|.+.+.+|.
T Consensus 395 --~~~L~~L~ls~N~l~~~~~iP~sl-----~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 395 --PQNLKQLHVETNPLREFPDIPESV-----EDLRMNSERVVDPYEF 434 (454)
T ss_dssp -----------------------------------------------
T ss_pred --cCcCCEEECCCCcCCccccchhhH-----hheeCcCcccCCcccc
Confidence 5789999999999998 788765 4567788888887764
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.8e-42 Score=401.36 Aligned_cols=251 Identities=22% Similarity=0.263 Sum_probs=201.2
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC----CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT----HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
.++|++.++||+|+||+||+|+.+ +|+.||+|++.+.. .........+.++.+++.++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 356889999999999999999987 79999999995432 1111122233456777888999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
|+|||||+||+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++++|++||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999998754 589999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCc-hhHHHHHHHHhccCCC
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGEN-KDIVRWVTEATLSSPE 913 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 913 (973)
+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||....... ..+...+.......+
T Consensus 342 ~~~~~------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p- 414 (689)
T 3v5w_A 342 FSKKK------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP- 414 (689)
T ss_dssp CSSCC------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC-
T ss_pred cCCCC------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC-
Confidence 64332 234689999999999974 579999999999999999999999997532221 122222222111100
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPS-----MRRVVEL 965 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 965 (973)
.....++.+++.+|+++||++|++ +.||++|
T Consensus 415 ---------------------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 415 ---------------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---------------------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---------------------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 112356789999999999999998 7888765
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.9e-42 Score=406.31 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=212.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
+.+.++|++.+.||+|+||.||+|+.+ +|+.||+|++... .....+.+.+|+.+|+.++|||||+++++|.+++..|
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence 456678999999999999999999986 7999999999543 3445667899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC--CceEEeccCcch
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE--MVPRVADFGLAK 834 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGl~~ 834 (973)
+|||||++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 231 iv~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp EEEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred EEEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecccee
Confidence 9999999999999986532 3589999999999999999999999 99999999999999854 899999999998
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
.+.... ......||+.|||||++.+..|+.++||||+||++|||++|+.||... ...+....+.......+..
T Consensus 306 ~~~~~~-----~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~ 378 (573)
T 3uto_A 306 HLDPKQ-----SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCDWNMDDS 378 (573)
T ss_dssp ECCTTS-----EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCSG
T ss_pred EccCCC-----ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHhCCCCCCcc
Confidence 775432 234567999999999999999999999999999999999999999753 3334444433322111100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. ......+.+++.+||+.||++|||+.|+++|
T Consensus 379 ------------~~------~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 ------------AF------SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ------------GG------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------------cc------cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 0113567889999999999999999999986
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-41 Score=372.31 Aligned_cols=277 Identities=38% Similarity=0.585 Sum_probs=230.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
+...++|+..+.||+|+||.||+|+.++|+.||+|++... .....+.+.+|+.++++++||||+++++++..++..++
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 5677899999999999999999999988999999998543 33456778999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 758 VYEYMPNGSLADMLHEKGRS-GSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 99999999999999765422 3589999999999999999999999 9999999999999999999999999999765
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC-CchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG-ENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 915 (973)
...... .......||+.|+|||++.++.++.++||||||+++|||++|+.||..... +......|.......
T Consensus 190 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 262 (321)
T 2qkw_B 190 TELDQT--HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN----- 262 (321)
T ss_dssp SSSSCC--CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-----
T ss_pred cccccc--ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-----
Confidence 432221 122345689999999999989999999999999999999999999976433 233455555443332
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
..+.+.+++.+.. ....+....+.+++.+|++.||++|||+.||+++|+..
T Consensus 263 --~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 263 --GQLEQIVDPNLAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp --TCCCSSSSSSCTT-CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --ccHHHhcChhhcc-ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 3344555554432 34477888999999999999999999999999999874
No 49
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.5e-41 Score=372.71 Aligned_cols=295 Identities=27% Similarity=0.521 Sum_probs=192.4
Q ss_pred cchhhHHHHHHHhhhccCCCCCccCCccCCCCCCCCc--cceeEEcCCC--CceeEeecCCCccCC--CCCCCccCcccc
Q 039922 25 SLHGDAEILIRVKSDQLDDPNRKLGDWVRTSQQSPCN--WTGITCETQN--QSVDGIDLSGFDLSG--GFPNGFCRIRTL 98 (973)
Q Consensus 25 ~~~~~~~~l~~~k~~~~~d~~~~~~sw~~~~~~~~C~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~~~~l~~L 98 (973)
+.+.|++||++||+++ .||. .+++|.. +.+||. |+||+|+..+ ++|+.|+|++++++| .+|+.|.++++|
T Consensus 3 c~~~~~~aL~~~k~~~-~~~~-~l~~W~~--~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDL-GNPT-TLSSWLP--TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp SCHHHHHHHHHHHHHT-TCCG-GGTTCCT--TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCHHHHHHHHHHHHhc-CCcc-cccCCCC--CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 4567899999999997 6776 7999964 457898 9999998754 789999999999998 888888888888
Q ss_pred ceeccCC-CcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecC
Q 039922 99 RNLNLSD-NYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLG 177 (973)
Q Consensus 99 ~~L~Ls~-n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 177 (973)
++|+|++ |++.+.+|. .|..+++|++|+|++|.+.+.+|..+..+++|++|+|++|.+++.+|..++.+++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~-~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPP-AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCG-GGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CeeeCCCCCcccccCCh-hHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 8888884 777655542 34555555555555555555555555555555555555555554445445555555555555
Q ss_pred CcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCC-CCCEEEccCCcccc
Q 039922 178 GNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLA-FLSNLDLSDNFLSG 256 (973)
Q Consensus 178 ~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~ 256 (973)
+|++++.+|..+ ++++ +|++|++++|++++
T Consensus 158 ~N~l~~~~p~~l-------------------------------------------------~~l~~~L~~L~L~~N~l~~ 188 (313)
T 1ogq_A 158 GNRISGAIPDSY-------------------------------------------------GSFSKLFTSMTISRNRLTG 188 (313)
T ss_dssp SSCCEEECCGGG-------------------------------------------------GCCCTTCCEEECCSSEEEE
T ss_pred CCcccCcCCHHH-------------------------------------------------hhhhhcCcEEECcCCeeec
Confidence 554444444444 4444 45555555555555
Q ss_pred cCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCC
Q 039922 257 KIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASN 336 (973)
Q Consensus 257 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 336 (973)
.+|..|..++ |++|++++|++++..|..+..+++|+.|+|++|.+++.+|......+|++|+|++|++++.+|..+..+
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 267 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQL 267 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcC
Confidence 5555555554 555555555555555555555566666666666655444442222356666666677766777777777
Q ss_pred CccceeeeccccccCCCCCCccCCCCccceeeeccc-ccc
Q 039922 337 PNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTND-FTG 375 (973)
Q Consensus 337 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~ 375 (973)
++|++|+|++|+++|.+|.. ..+++|+.+++++|+ +.|
T Consensus 268 ~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 268 KFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred cCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 88888888888888777765 777788888888776 443
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.7e-41 Score=373.08 Aligned_cols=289 Identities=40% Similarity=0.671 Sum_probs=235.2
Q ss_pred eeeecccc-ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeE
Q 039922 670 FQRVSFNE-DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMC 748 (973)
Q Consensus 670 ~~~~~~~~-~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 748 (973)
...+++.+ ....++|+..+.||+|+||.||+|+.++|+.||||++..... ......+.+|+++++.++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEE
Confidence 34455555 566789999999999999999999988899999999964332 2223358899999999999999999999
Q ss_pred EecCCeeEEEEeccCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEE
Q 039922 749 CSGQDFNILVYEYMPNGSLADMLHEKGR-SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRV 827 (973)
Q Consensus 749 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 827 (973)
+...+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+.++|+||||||+||++++++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 9999999999999999999999986543 235899999999999999999999987778999999999999999999999
Q ss_pred eccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCC---CCCchhHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPS---FGENKDIVRWV 904 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~---~~~~~~~~~~~ 904 (973)
+|||+++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+|+
T Consensus 176 ~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 176 GDFGLAKLMDYKDT---HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp CCCSSCEECCSSSS---CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred ccCccccccCcccc---cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 99999987643332 2233456999999999999889999999999999999999999999631 22344455665
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
...... ..+..+.+..... ....+....+.+++.+|++.||++|||+.||+++|++..
T Consensus 253 ~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 253 KGLLKE-------KKLEALVDVDLQG-NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TTTTSS-------CCSTTSSCTTCTT-SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHhhc-------hhhhhhcChhhcc-ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 444333 3344455544432 345778899999999999999999999999999998743
No 51
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-40 Score=365.35 Aligned_cols=260 Identities=33% Similarity=0.452 Sum_probs=206.5
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|++.+.||+|+||+||+|+.. |+.||||++..........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 457889999999999999999874 8999999997665556666789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPA--IVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|+++|+|.+++........+++..++.++.|++.||+|||+. + |+||||||+||++++++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 999999999998654323489999999999999999999999 8 99999999999999999999999999976433
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.......
T Consensus 192 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~~------- 258 (309)
T 3p86_A 192 TF----LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAVGFKCKRL------- 258 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHHSCCCC-------
T ss_pred cc----cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCC-------
Confidence 22 1123457899999999999999999999999999999999999999753 2233333222211110
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.+ .......+.+++.+|++.||++|||+.|+++.|+...
T Consensus 259 --------~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 259 --------EI-----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp --------CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 0112356889999999999999999999999998753
No 52
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.4e-40 Score=365.05 Aligned_cols=253 Identities=26% Similarity=0.378 Sum_probs=212.9
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
....++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+.+|+++++.++||||+++++++...+..|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 345678999999999999999999984 8999999999765555566677889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 9999999999999997654 489999999999999999999999 9999999999999999999999999999766
Q ss_pred cccCCCccccccccccccCccccccccCCCCC-CCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVT-EKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.... ......||+.|+|||++.+..+. .++||||+||++|||++|+.||... ........+.......+
T Consensus 165 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~p--- 234 (328)
T 3fe3_A 165 TVGG-----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--NLKELRERVLRGKYRIP--- 234 (328)
T ss_dssp SSSC-----GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC---
T ss_pred CCCC-----ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCC---
Confidence 4322 23446799999999999888765 7899999999999999999999753 33334443333221110
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
......+.+++.+|++.||++|||+.|++++
T Consensus 235 -------------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 -------------------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -------------------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -------------------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0113567889999999999999999999876
No 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=360.91 Aligned_cols=258 Identities=27% Similarity=0.440 Sum_probs=209.8
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..++||+|+||.||+|++. +++.||+|++. .......+.+.+|++++++++||||+++++++.+++..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~--~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI--RFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEES--CCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEec--cCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 356888999999999999999986 68999999984 334566778999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 87 e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp ECCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999999986433 589999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCCcc----------ccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchh----HHHHHH
Q 039922 840 EGQSD----------DAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKD----IVRWVT 905 (973)
Q Consensus 840 ~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~----~~~~~~ 905 (973)
..... .......||+.|+|||++.+..++.++||||||+++|||++|..|+......... ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 32110 1112457999999999999999999999999999999999999998653222111 111111
Q ss_pred HHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 906 EATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 906 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.. .+ ......+.+++.+|++.||++|||+.|+++.|+..+
T Consensus 242 ~~----~~---------------------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 242 RY----CP---------------------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp HT----CC---------------------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc----CC---------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 10 00 011235788999999999999999999999998753
No 54
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.3e-40 Score=357.49 Aligned_cols=253 Identities=23% Similarity=0.334 Sum_probs=208.2
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
+..++|+..+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 45578999999999999999999864 79999999985433 2345668899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999999764 488999999999999999999999 99999999999999999999999999987664
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+........
T Consensus 168 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~~~~~~~~~~----- 236 (297)
T 3fxz_A 168 PEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE--NPLRALYLIATNGTPEL----- 236 (297)
T ss_dssp STTC----CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHHCSCCC-----
T ss_pred Cccc----ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCC-----
Confidence 4322 233467999999999999999999999999999999999999999753 22222222211111100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. ........+.+++.+|++.||++|||+.|++++
T Consensus 237 ------~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 237 ------Q--------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ------S--------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------C--------CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 001223568899999999999999999999875
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-40 Score=364.63 Aligned_cols=255 Identities=25% Similarity=0.353 Sum_probs=203.0
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
+++.++|+..+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 456788999999999999999999975 7999999999654332 23456889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 85 lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999997654 489999999999999999999999 9999999999999999999999999998765
Q ss_pred cccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
..... .......||+.|+|||++.+..+ +.++||||+||++|||++|..||... ........+.......+
T Consensus 159 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~p--- 230 (347)
T 3zgw_A 159 KGNKD---YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD--NVMALYKKIMRGKYDVP--- 230 (347)
T ss_dssp ----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC---
T ss_pred cCCCC---ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCC---
Confidence 43321 12344579999999999988775 88999999999999999999999752 33334444433322110
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
......+.+++.+|++.||++|||+.|++++-
T Consensus 231 -------------------~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 231 -------------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp -------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred -------------------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 01124567899999999999999999999763
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.2e-39 Score=355.59 Aligned_cols=285 Identities=36% Similarity=0.560 Sum_probs=223.2
Q ss_pred eecccc-ccccCCCCcc------ccccccCCeeEEEEEECCCCEEEEEEecCCC--CCchhHHHHHHHHHHHhcCCCCCe
Q 039922 672 RVSFNE-DDILPHLTEQ------NLIGSGGSCRVYKVKLKSGETVAVKRLLGGT--HKPETETVFRSEIETLGRVRHGNV 742 (973)
Q Consensus 672 ~~~~~~-~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni 742 (973)
.+.+.+ ..++..|... +.||+|+||.||+|+. +++.||+|++.... ......+.+.+|+.++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 334333 4455555544 8999999999999987 58999999986432 234456789999999999999999
Q ss_pred eeEEeEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC
Q 039922 743 VKLLMCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE 822 (973)
Q Consensus 743 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 822 (973)
+++++++...+..++||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||+++++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCC
Confidence 999999999999999999999999999997654445689999999999999999999999 99999999999999999
Q ss_pred CceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHH
Q 039922 823 MVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVR 902 (973)
Q Consensus 823 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 902 (973)
+.+||+|||+++........ .......||+.|+|||++.+ .++.++||||||+++|||++|..||..... ......
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~ 245 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQT--VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE-PQLLLD 245 (307)
T ss_dssp CCEEECCCTTCEECCSCSSC--EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS-SSBTTH
T ss_pred CcEEEeeccccccccccccc--ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc-hHHHHH
Confidence 99999999998765433221 12234578999999998765 588999999999999999999999976422 222222
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcccC
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKSS 972 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 972 (973)
+........ ..+.+.+++.+. .........+.+++.+|++.||++|||+.||+++|++++.|
T Consensus 246 ~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 246 IKEEIEDEE------KTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp HHHHHHTTS------CCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred HHHHhhhhh------hhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 222221110 123333444332 34467788999999999999999999999999999998765
No 57
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.4e-39 Score=373.37 Aligned_cols=411 Identities=17% Similarity=0.165 Sum_probs=244.0
Q ss_pred cCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCc
Q 039922 84 LSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPE 163 (973)
Q Consensus 84 l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 163 (973)
..+..+.+++++++|++|+|++|.+++. | .++.+++|++|+|++|.+.+. | ++.+++|++|+|++|.+++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e-
Confidence 3444455677888888888888888753 4 577888888888888887764 3 77888888888888888864 3
Q ss_pred ccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCC
Q 039922 164 SFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAF 243 (973)
Q Consensus 164 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 243 (973)
++.+++|++|+|++|++++. | ++++++|++|++++|+++.++ ++.+++|++|++++|+..+.+ .++.+++
T Consensus 102 -~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l~----l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEID----VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCCC----CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred -cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccceec----cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 78888888888888888864 3 778888888888888876531 444444444444444433333 2444555
Q ss_pred CCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCC
Q 039922 244 LSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDN 323 (973)
Q Consensus 244 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N 323 (973)
|++|++++|++++ +| +..+++|+.|++++|++++. .+..+++ |+.|++++|
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~-----------------------L~~L~Ls~N 222 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQ-----------------------LTFLDCSSN 222 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTT-----------------------CSEEECCSS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCC-----------------------CCEEECcCC
Confidence 5555555555553 22 44445555555555555432 1444444 555555555
Q ss_pred cCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCC
Q 039922 324 YFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPE 403 (973)
Q Consensus 324 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 403 (973)
++++ +| +..+++|+.|++++|++++.. ++.+++|+.|+++.|+ |+.|++++|.+.+.+|
T Consensus 223 ~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~- 281 (457)
T 3bz5_A 223 KLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ- 281 (457)
T ss_dssp CCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE-
T ss_pred cccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc-
Confidence 5554 33 445555556666666555432 2344555555555442 3345555555555444
Q ss_pred ccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcC
Q 039922 404 SYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQL 483 (973)
Q Consensus 404 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 483 (973)
++.+++|++|++++|...+.+|. ..++|+.|++++ +++|++|++++|++++. + ++.+++|
T Consensus 282 -~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~-------------~~~L~~L~L~~N~l~~l-~--l~~l~~L 341 (457)
T 3bz5_A 282 -AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQ-------------NPKLVYLYLNNTELTEL-D--VSHNTKL 341 (457)
T ss_dssp -CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTT-------------CTTCCEEECTTCCCSCC-C--CTTCTTC
T ss_pred -ccccccCCEEECCCCcccceecc---CCCcceEechhh-------------cccCCEEECCCCccccc-c--cccCCcC
Confidence 34556666666666665555443 223344333333 35677777777777763 2 6777777
Q ss_pred cEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccc-cccccEEecCC
Q 039922 484 QAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGN-LAVLTSLDLSS 562 (973)
Q Consensus 484 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~ 562 (973)
+.|++++|++++ ++.|..|++++|++.|. +.+..|..++|++|+++|.+|..+.. ..++....-+.
T Consensus 342 ~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~~~~~~~~~~~~~ 408 (457)
T 3bz5_A 342 KSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGD 408 (457)
T ss_dssp SEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBCTTSCCCEEEESS
T ss_pred cEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhcccCceeeccCCC
Confidence 788888877774 24566677777777765 34566777788888888777765432 23333333333
Q ss_pred CcCcccc---------ChhhhcccccceeccCCcCcccCCCCC
Q 039922 563 NLLTGEI---------PLELTKLKLNQFNISHNKLYGEVPSDF 596 (973)
Q Consensus 563 N~l~~~~---------p~~l~~l~l~~l~l~~N~l~g~~p~~~ 596 (973)
+...... +..... -+..+..++|.++|+|++.+
T Consensus 409 ~~~y~~~~~~i~~k~~~~~~~~-~~y~~~~~~~~fsG~i~~p~ 450 (457)
T 3bz5_A 409 GGVYDQATNTITWENLSTDNPA-VTYTFTSENGAIVGTVTTPF 450 (457)
T ss_dssp SEEEETTTTEEEESSCCTTSCE-ECEEEECTTSSEEEEEEEEB
T ss_pred CccccCCCCeeEEEeccCCCce-EEEEEecCCcEEeeEecccc
Confidence 2221111 111111 12334445788888887654
No 58
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.7e-40 Score=367.12 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=212.2
Q ss_pred cCCCCccccccccCCeeEEEEEEC--------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEec
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK--------SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSG 751 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 751 (973)
.++|+..+.||+|+||.||+|+.. ++..||||++... ......+.+.+|+++++++ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 457888999999999999999863 4567999999543 2344556789999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEE
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGR-------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNIL 818 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 818 (973)
.+..|+||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999986532 13478999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCc
Q 039922 819 LDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGEN 897 (973)
Q Consensus 819 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~ 897 (973)
+++++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~--~~ 311 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PV 311 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTT--CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CG
T ss_pred ECCCCCEEEccccCCcccCcccce--ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--CH
Confidence 999999999999999866543221 12233457889999999999999999999999999999999 99998753 33
Q ss_pred hhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 898 KDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.++...+........+ ......+.+++.+|++.||++||++.|++++|+.+
T Consensus 312 ~~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 312 EELFKLLKEGHRMDKP---------------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp GGHHHHHHTTCCCCCC---------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCC---------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4444433332211000 11235688999999999999999999999999874
No 59
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.3e-40 Score=365.04 Aligned_cols=258 Identities=22% Similarity=0.298 Sum_probs=211.7
Q ss_pred cccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc----hhHHHHHHHHHHHhcCCCCCeeeEEeEEec
Q 039922 677 EDDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP----ETETVFRSEIETLGRVRHGNVVKLLMCCSG 751 (973)
Q Consensus 677 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 751 (973)
...+.+.|+..+.||+|+||.||+|+.+ +|+.||+|++.+..... ...+.+.+|+.++++++||||+++++++.+
T Consensus 7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 86 (361)
T 2yab_A 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN 86 (361)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence 3566778999999999999999999987 69999999996543321 235678999999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC----ceEE
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM----VPRV 827 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl 827 (973)
.+..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++ .+||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl 160 (361)
T 2yab_A 87 RTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEE
Confidence 999999999999999999997543 589999999999999999999999 999999999999998877 7999
Q ss_pred eccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 907 (973)
+|||++....... ......||+.|+|||++.+..++.++||||+||++|||++|..||... ...+....+...
T Consensus 161 ~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~ 233 (361)
T 2yab_A 161 IDFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAV 233 (361)
T ss_dssp CCCSSCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTT
T ss_pred EecCCceEcCCCC-----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhc
Confidence 9999998764432 233467999999999999999999999999999999999999999753 333333333222
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
....++. .. ......+.+++.+|+++||++|||+.|++++
T Consensus 234 ~~~~~~~--------~~----------~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 SYDFDEE--------FF----------SQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CCCCCHH--------HH----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCCch--------hc----------cCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1110000 00 0123568899999999999999999999875
No 60
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.2e-39 Score=355.66 Aligned_cols=276 Identities=23% Similarity=0.274 Sum_probs=209.8
Q ss_pred ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
+.+.++|+..+.||+|+||+||+|+.++|+.||+|++..........+.+.+|++++++++||||+++++++..++..++
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 56778899999999999999999999899999999996555444556778899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 97 VFEFME-KDLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEECCS-EEHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEcCCC-CCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 999997 58888887543 2589999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+........+..+
T Consensus 171 ~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~ 244 (311)
T 3niz_A 171 IPV----RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT--DDDQLPKIFSILGTPNPREW 244 (311)
T ss_dssp SCC----C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--TTTHHHHHHHHHCCCCTTTS
T ss_pred CCc----ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHHCCCChHHh
Confidence 322 22334578999999999876 568999999999999999999999997642 22333333332222221111
Q ss_pred cC--cccccccCCCCCC-CC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CR--DLNQLIDPRMDLS-TC-----DYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~--~l~~~~d~~l~~~-~~-----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. .+....+...... .. ......++.+++.+|+++||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp GGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 10 0000001111000 00 01123578899999999999999999999985
No 61
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.1e-39 Score=357.00 Aligned_cols=266 Identities=26% Similarity=0.304 Sum_probs=205.6
Q ss_pred cccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhc--CCCCCeeeEEeEEec----C
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGR--VRHGNVVKLLMCCSG----Q 752 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~ 752 (973)
.+.++|+..+.||+|+||.||+|+. +|+.||||++.. .....+.+|.+++.. ++||||+++++++.. .
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG-----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc-----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 3456899999999999999999988 589999999832 233445556666555 799999999998654 3
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEeCCCCCCEEeCCCCc
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLH--------NDCVPAIVHRDVKSHNILLDAEMV 824 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~ 824 (973)
+..++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 5679999999999999999543 5899999999999999999999 77 9999999999999999999
Q ss_pred eEEeccCcchhccccCCCccccccccccccCccccccccCC------CCCCCCChhhHHHHHHHHHcC----------CC
Q 039922 825 PRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK------KVTEKSDVYSFGVVLMELVTG----------KR 888 (973)
Q Consensus 825 ~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~ 888 (973)
+||+|||+++.................||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 99999999977654433222223345799999999999876 455789999999999999999 88
Q ss_pred CCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhh
Q 039922 889 PNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRV 968 (973)
Q Consensus 889 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 968 (973)
||..................... ..+.+............+.+++.+|++.||++|||+.||++.|++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQ------------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSC------------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccC------------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 88654333333322222211110 011111111223567889999999999999999999999999987
Q ss_pred c
Q 039922 969 D 969 (973)
Q Consensus 969 ~ 969 (973)
+
T Consensus 300 i 300 (301)
T 3q4u_A 300 I 300 (301)
T ss_dssp H
T ss_pred c
Confidence 5
No 62
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=359.91 Aligned_cols=261 Identities=28% Similarity=0.429 Sum_probs=210.4
Q ss_pred ccCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
..++|++.+.||+|+||.||+|++. .+..||||++.... .....+.+.+|+.++++++||||+++++++..++..
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 3467889999999999999999985 34569999995432 345567799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++||||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999997543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
....... ........+|+.|+|||++.+..++.++||||||+++|||++ |..||... ...+....+........+
T Consensus 201 ~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~~~~- 276 (325)
T 3kul_A 201 LEDDPDA-AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGYRLPAP- 276 (325)
T ss_dssp CC----C-CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCCCCC-
T ss_pred cccCccc-eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCCCCCC-
Confidence 6543221 112233456778999999998999999999999999999999 99999653 333333333322111000
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+.+++.+|++.||++||++.||++.|+...
T Consensus 277 --------------------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 277 --------------------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp --------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------------------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 122357889999999999999999999999998753
No 63
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.5e-40 Score=351.49 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=211.8
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEec
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEY 761 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 761 (973)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 4688899999999999999999889999999995432 2345689999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCC
Q 039922 762 MPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEG 841 (973)
Q Consensus 762 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~ 841 (973)
+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 87 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp CTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999997643 2589999999999999999999999 999999999999999999999999999986643221
Q ss_pred CccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCcc
Q 039922 842 QSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDL 920 (973)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 920 (973)
.......+++.|+|||++.+..++.++||||+|+++|||++ |+.||... ...+....+.......
T Consensus 162 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--~~~~~~~~~~~~~~~~--------- 227 (269)
T 4hcu_A 162 ---TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY--------- 227 (269)
T ss_dssp ---HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC---------
T ss_pred ---ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhcCccCC---------
Confidence 12233456788999999998999999999999999999999 89998753 2333333332221110
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcccC
Q 039922 921 NQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKSS 972 (973)
Q Consensus 921 ~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 972 (973)
.+ ......+.+++.+|++.||++||++.|++++|++...+
T Consensus 228 ----~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 228 ----KP--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ----CC--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CC--------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00 11135688999999999999999999999999987543
No 64
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-40 Score=360.13 Aligned_cols=255 Identities=18% Similarity=0.260 Sum_probs=210.7
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
++.++|+..+.||+|+||.||+|+.+ +++.||+|.+.. .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---CTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEec---CcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 45678999999999999999999987 688999999842 23455678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC--CCceEEeccCcchh
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA--EMVPRVADFGLAKA 835 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGl~~~ 835 (973)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 999999999999997543 2589999999999999999999999 9999999999999987 78999999999987
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
..... ......||+.|+|||++.+..++.++||||+||++|||++|..||... ........+.......+..
T Consensus 154 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~- 225 (321)
T 1tki_A 154 LKPGD-----NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDEE- 225 (321)
T ss_dssp CCTTC-----EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCHH-
T ss_pred CCCCC-----ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--CHHHHHHHHHcCCCCCChh-
Confidence 64322 233467899999999999888999999999999999999999999753 3333444333322211000
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.. .....++.+++.+|+++||++|||+.|++++-
T Consensus 226 -------~~----------~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 226 -------AF----------KEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp -------HH----------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -------hh----------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 00 01235688999999999999999999999864
No 65
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.5e-40 Score=376.68 Aligned_cols=357 Identities=20% Similarity=0.182 Sum_probs=205.1
Q ss_pred cCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccc
Q 039922 116 SLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTEL 195 (973)
Q Consensus 116 ~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 195 (973)
.++.+++|++|++++|.+.+. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++. | ++++++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 345555555555555555542 3 355555555555555555542 2 55555555555555555543 2 5555555
Q ss_pred cEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccC
Q 039922 196 THFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFD 275 (973)
Q Consensus 196 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 275 (973)
++|++++|+++.+ | ++++++|++|++++|++++. .++++++|++|++++
T Consensus 109 ~~L~L~~N~l~~l--------------------------~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 109 TYLNCDTNKLTKL--------------------------D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHL 157 (457)
T ss_dssp CEEECCSSCCSCC--------------------------C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTT
T ss_pred CEEECCCCcCCee--------------------------c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCC
Confidence 5555555554331 1 44556666666666666653 255666666666666
Q ss_pred CcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCC
Q 039922 276 NQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPD 355 (973)
Q Consensus 276 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 355 (973)
|+..+.+ .+..+++|+.|++++|++++. | .....+|+.|++++|++++. .+..+++|+.|++++|++++ +|
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip- 228 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID- 228 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC-
T ss_pred CCccccc--ccccCCcCCEEECCCCcccee-c-cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC-
Confidence 6443333 355556666666666666542 2 11222455555555555543 25555566666666666654 33
Q ss_pred CccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCc
Q 039922 356 DLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEV 435 (973)
Q Consensus 356 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 435 (973)
++.+++|++|++++|++++.. ++.+++|+.|++++|+ |
T Consensus 229 -~~~l~~L~~L~l~~N~l~~~~---------------------------~~~l~~L~~L~l~~n~--------------L 266 (457)
T 3bz5_A 229 -VTPLTQLTYFDCSVNPLTELD---------------------------VSTLSKLTTLHCIQTD--------------L 266 (457)
T ss_dssp -CTTCTTCSEEECCSSCCSCCC---------------------------CTTCTTCCEEECTTCC--------------C
T ss_pred -ccccCCCCEEEeeCCcCCCcC---------------------------HHHCCCCCEEeccCCC--------------C
Confidence 555555666666655555432 2344555555555543 2
Q ss_pred cEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeecccc
Q 039922 436 DFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQEN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.|++++|++.+.+| +..+++|+.|++++|.+.+.+|. ...+|+.|++++| ++|+.|+|++|
T Consensus 267 ~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N 328 (457)
T 3bz5_A 267 LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNT 328 (457)
T ss_dssp SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTC
T ss_pred CEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCC
Confidence 344556665555444 45566777777777776666653 2344555555544 56777777777
Q ss_pred ccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCCC
Q 039922 516 MFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~ 594 (973)
+|++. + ++.+++|+.|++++|+|++ ++.|+.|++++|.++|. ..+ .+..+++++|+|+|.||.
T Consensus 329 ~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 329 ELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp CCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred ccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 77763 2 7777777777777777775 24556667777777765 133 567778888888888876
Q ss_pred CC
Q 039922 595 DF 596 (973)
Q Consensus 595 ~~ 596 (973)
.+
T Consensus 393 ~~ 394 (457)
T 3bz5_A 393 DL 394 (457)
T ss_dssp TC
T ss_pred hH
Confidence 54
No 66
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.6e-39 Score=363.92 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=212.7
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
.+.++|+..+.||+|+||.||+|..+ +|+.||+|++..........+.+.+|+.++++++||||+++++++.+++..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45567999999999999999999876 68999999997665555666778999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC---CceEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE---MVPRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGl~~ 834 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999887543 589999999999999999999999 99999999999999865 459999999998
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +.......+.......+..
T Consensus 180 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~ 252 (362)
T 2bdw_A 180 EVNDSE-----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSP 252 (362)
T ss_dssp CCTTCC-----SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTT
T ss_pred EecCCc-----ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCcc
Confidence 664322 233467999999999999999999999999999999999999999753 3344444444433221110
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. . ......+.+++.+|+++||++||++.|++++
T Consensus 253 ~------------~------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 E------------W------DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G------------G------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c------------c------cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0 1123568899999999999999999999876
No 67
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=371.46 Aligned_cols=257 Identities=18% Similarity=0.245 Sum_probs=212.8
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
.+.++|+..+.||+|+||.||+|... +|+.||+|++..........+.+.+|+.++++++||||+++++++.+++..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 45567899999999999999999875 78999999997665555566778999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC---CCCceEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD---AEMVPRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGl~~ 834 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ +++.+||+|||++.
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999987653 489999999999999999999999 999999999999998 46789999999997
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||... +.......+.......+..
T Consensus 162 ~~~~~~----~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 162 EVEGEQ----QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSP 235 (444)
T ss_dssp CCCTTC----CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCTT
T ss_pred EecCCC----ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCcc
Confidence 664332 2233467999999999999999999999999999999999999999752 3444445444433221111
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. ......+.+++.+|+++||++|||+.|++++
T Consensus 236 ------------~~------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 ------------EW------DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ------------TT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ------------cc------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 1123568899999999999999999999885
No 68
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=355.30 Aligned_cols=277 Identities=22% Similarity=0.288 Sum_probs=216.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC--eeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD--FNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 757 (973)
.++|+..++||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 457889999999999999999987 58999999995332 2233566789999999999999999999988755 7799
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe----CCCCceEEeccCcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL----DAEMVPRVADFGLA 833 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGl~ 833 (973)
||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999998765444589999999999999999999999 99999999999999 88888999999999
Q ss_pred hhccccCCCccccccccccccCcccccccc--------CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC--chhHHHH
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAY--------TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE--NKDIVRW 903 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--~~~~~~~ 903 (973)
+....... .....||..|+|||++. +..++.++|||||||++|||++|+.||...... .......
T Consensus 164 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 238 (319)
T 4euu_A 164 RELEDDEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238 (319)
T ss_dssp EECCTTCC-----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHH
T ss_pred eecCCCCc-----eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHH
Confidence 87644322 23456899999999886 578899999999999999999999999753222 2222222
Q ss_pred HHHHhccCCCccccCccccccc------CCC-CCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 904 VTEATLSSPERGCCRDLNQLID------PRM-DLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d------~~l-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
+....... .......... +.+ ............+.+++.+|++.||++|||++|++++..+..
T Consensus 239 ~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 239 IITGKPSG----AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHCCTT----CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HhcCCCcc----cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 22222111 1111111111 111 112344677888999999999999999999999999998754
No 69
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-39 Score=365.70 Aligned_cols=260 Identities=27% Similarity=0.430 Sum_probs=200.9
Q ss_pred ccCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
..++|+..+.||+|+||.||+|+.+ +++.||||++.... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 3457999999999999999999875 57789999995432 345567899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++||||+++|+|.++++... ..+++..++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999997643 3589999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
........ .......++..|+|||++.++.++.++||||||+++|||++ |+.||... ...+....+........+
T Consensus 197 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~~~~~- 272 (373)
T 2qol_A 197 LEDDPEAA-YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRLPPP- 272 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEECCCC-
T ss_pred cccCCccc-eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC-
Confidence 65432211 11222345778999999999999999999999999999998 99999753 333344333322211100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++||++.||++.|+..
T Consensus 273 --------------------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 273 --------------------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp --------------------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------------------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 12235688999999999999999999999999874
No 70
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.5e-40 Score=371.26 Aligned_cols=261 Identities=23% Similarity=0.347 Sum_probs=211.7
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+++ +++.||||++... ......+.+.+|++++++++||||+++++++..++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 356888899999999999999987 7899999998533 23344567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++|+|.++++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 192 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp ECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred EcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 99999999999976432 588999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. ........++..|+|||++.++.++.++|||||||++|||++ |..||... ...+..+.+........+
T Consensus 267 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~----- 337 (377)
T 3cbl_A 267 VY--AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL--SNQQTREFVEKGGRLPCP----- 337 (377)
T ss_dssp EE--ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--CHHHHHHHHHTTCCCCCC-----
T ss_pred ce--eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC-----
Confidence 11 111112335778999999998899999999999999999998 89898653 333344443332211100
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcccC
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKSS 972 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 972 (973)
...+..+.+++.+||+.||++|||+.+|++.|+.++..
T Consensus 338 ----------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 338 ----------------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 11235678999999999999999999999999987643
No 71
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.4e-39 Score=347.86 Aligned_cols=257 Identities=26% Similarity=0.408 Sum_probs=210.6
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|+..+.||+|+||.||+|+.++++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 35688899999999999999999988899999995332 234568999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|+++++|.+++..... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 84 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp CCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999976532 489999999999999999999999 99999999999999999999999999998664332
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||... ........+.......
T Consensus 159 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~-------- 225 (268)
T 3sxs_A 159 Y---VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVSQGHRLY-------- 225 (268)
T ss_dssp E---EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC--------
T ss_pred h---hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--ChHHHHHHHHcCCCCC--------
Confidence 1 12233456778999999998899999999999999999999 99999753 2222222222211110
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
.+ ......+.+++.+|++.||++|||+.|++++|+..+.
T Consensus 226 -----~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 226 -----RP--------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp -----CC--------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred -----CC--------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 00 0113468899999999999999999999999998653
No 72
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-39 Score=358.25 Aligned_cols=257 Identities=23% Similarity=0.316 Sum_probs=207.7
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
+.++|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|+.+++.++||||+++++++..++..|+|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4578999999999999999999987 799999999854332 23345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999987543 589999999999999999999999 999999999999999999999999999976543
Q ss_pred cCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... ........||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|........+
T Consensus 158 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 230 (323)
T 3tki_A 158 NNR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----- 230 (323)
T ss_dssp TTE--ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT-----
T ss_pred CCc--ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc-----
Confidence 321 122334679999999999987765 778999999999999999999998654443444443322111100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.......+.+++.+|++.||++|||+.|++++-
T Consensus 231 ----------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 231 ----------------WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp ----------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred ----------------cccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 011235678899999999999999999998763
No 73
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=356.83 Aligned_cols=257 Identities=22% Similarity=0.296 Sum_probs=210.1
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc----hhHHHHHHHHHHHhcCCCCCeeeEEeEEecC
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP----ETETVFRSEIETLGRVRHGNVVKLLMCCSGQ 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 752 (973)
+.+.+.|+..+.||+|+||.||+|+.+ +|+.||+|++....... ...+.+.+|+.++++++||||+++++++...
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 455667899999999999999999986 68999999996543221 2457789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC----ceEEe
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM----VPRVA 828 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 828 (973)
+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++ .+||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 99999999999999999997543 589999999999999999999999 999999999999999887 89999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|..||... ...+....+....
T Consensus 161 Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~ 233 (326)
T 2y0a_A 161 DFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVN 233 (326)
T ss_dssp CCTTCEECCTTS-----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTC
T ss_pred ECCCCeECCCCC-----ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcC
Confidence 999998764332 123457999999999999999999999999999999999999999753 2223333332221
Q ss_pred ccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 909 LSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 909 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...+. ... ......+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~--------~~~----------~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 YEFED--------EYF----------SNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCCCH--------HHH----------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCcCc--------ccc----------ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11000 000 0123567899999999999999999999985
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.1e-39 Score=355.41 Aligned_cols=251 Identities=22% Similarity=0.276 Sum_probs=207.3
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 356888999999999999999986 699999999954321 123345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999997653 488999999999999999999999 999999999999999999999999999975432
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +.....+.+.......
T Consensus 158 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~------- 224 (337)
T 1o6l_A 158 DG----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRF------- 224 (337)
T ss_dssp TT----CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-------
T ss_pred CC----CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCC-------
Confidence 22 2234467999999999999999999999999999999999999999753 3333333333221110
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-----SMRRVVEL 965 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 965 (973)
. ......+.+++.+|++.||++|| ++.||++|
T Consensus 225 ----------p-----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 ----------P-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----------C-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----------C-----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 11235678999999999999999 89999876
No 75
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1e-38 Score=347.48 Aligned_cols=272 Identities=23% Similarity=0.291 Sum_probs=210.3
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
++|+..+.||+|+||+||+|+.. +|+.||+|++..........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999986 68999999997666555666788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|++ |++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 82 FCD-QDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred cCC-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 997 46666665432 3589999999999999999999999 99999999999999999999999999998664322
Q ss_pred CCccccccccccccCccccccccCCC-CCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKK-VTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
.......||+.|+|||++.+.. ++.++||||+||++|||++|+.|+.... +..+....+.......... ....
T Consensus 156 ----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-~~~~~~~~i~~~~~~~~~~-~~~~ 229 (292)
T 3o0g_A 156 ----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTPTEE-QWPS 229 (292)
T ss_dssp ----SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-SHHHHHHHHHHHHCCCCTT-TCTT
T ss_pred ----ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-CHHHHHHHHHHHhCCCChh-hhhh
Confidence 2233457899999999998765 7999999999999999999999976543 2333333333322221111 1111
Q ss_pred ccccccC--------CCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 920 LNQLIDP--------RMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 920 l~~~~d~--------~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+..+. ..............+.+++.+|++.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1111110 000011112335678899999999999999999999875
No 76
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.8e-39 Score=349.70 Aligned_cols=263 Identities=30% Similarity=0.430 Sum_probs=206.4
Q ss_pred ccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
..++|...+.||+|+||.||+|+.. ..+|+|+++.........+.+.+|++++++++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3467899999999999999999865 46999988655555666778999999999999999999999875 45688999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++++|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999997543 3589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccccccCcccccccc---CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAY---TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
.. ........||+.|+|||++. +..++.++|||||||++|||++|+.||.... ........+...... +
T Consensus 186 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~-~~~~~~~~~~~~~~~-~---- 257 (307)
T 3lb7_A 186 SG--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-NRDQIIFMVGRGYAS-P---- 257 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-CHHHHHHHHHHTCCC-C----
T ss_pred cc--cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC-cHHHHHHHHhcCCCC-c----
Confidence 21 12233457999999999986 5678889999999999999999999997532 222233322222211 0
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.+.++. ......+.+++.+|++.+|++||++.||+++|+...
T Consensus 258 --~~~~~~----------~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 258 --DLSKLY----------KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp --CSTTSC----------SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred --chhhhh----------cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 011111 112357889999999999999999999999998754
No 77
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.5e-39 Score=357.24 Aligned_cols=267 Identities=25% Similarity=0.300 Sum_probs=207.2
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC----eeEE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD----FNIL 757 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 757 (973)
++|+..++||+|+||.||+|+.. ++.||||++.. .......+.+|+.++++++||||+++++++.... ..++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECG---GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeec---CchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 46889999999999999999887 89999999942 2334455677999999999999999999998744 4699
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------CCCeEEeCCCCCCEEeCCCCceEEecc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC-------VPAIVHRDVKSHNILLDAEMVPRVADF 830 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------~~~ivH~Dlkp~NIll~~~~~~kl~Df 830 (973)
||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||++++++.+||+||
T Consensus 100 v~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999999764 4899999999999999999999862 238999999999999999999999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccCC-----CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCch-------
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-----KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENK------- 898 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~------- 898 (973)
|+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||........
T Consensus 176 g~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 176 GLALKFEAGKSA--GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp TTCEEECTTSCC--CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred CcccccccccCc--cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 999876544321 223345799999999998763 556688999999999999999999976432211
Q ss_pred ----hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 899 ----DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 899 ----~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
....+....... ...+.+............+.+++.+|++.||++|||+.||++.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHK------------KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CSSCCHHHHHHHHTTS------------CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcc------------cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111111111 011111111122345677999999999999999999999999998754
No 78
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-39 Score=361.69 Aligned_cols=260 Identities=19% Similarity=0.285 Sum_probs=212.1
Q ss_pred ccccccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC
Q 039922 674 SFNEDDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ 752 (973)
Q Consensus 674 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 752 (973)
......+.++|+..+.||+|+||.||+|..+ +|+.||+|++... .......+.+|++++++++||||+++++++.+.
T Consensus 43 ~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~ 120 (387)
T 1kob_A 43 EVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 120 (387)
T ss_dssp CCBCSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS
T ss_pred cccCCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC
Confidence 3344566788999999999999999999986 7899999998533 334556789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC--CCceEEecc
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA--EMVPRVADF 830 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Df 830 (973)
+..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 121 ~~~~lv~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 121 YEMVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp SEEEEEEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred CEEEEEEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEec
Confidence 99999999999999999987543 2589999999999999999999999 9999999999999974 578999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhcc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLS 910 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 910 (973)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|..||... ...+....+......
T Consensus 196 G~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~i~~~~~~ 268 (387)
T 1kob_A 196 GLATKLNPDE-----IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWE 268 (387)
T ss_dssp TTCEECCTTS-----CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHCCCC
T ss_pred ccceecCCCc-----ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC
Confidence 9998764332 123357899999999999999999999999999999999999999753 223333333332211
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+. ... ......+.+++.+|++.||++|||+.|++++
T Consensus 269 ~~~------------~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 269 FDE------------DAF------SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CCS------------STT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCc------------ccc------ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000 000 1123568899999999999999999999986
No 79
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.3e-39 Score=347.83 Aligned_cols=271 Identities=24% Similarity=0.313 Sum_probs=205.1
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEec
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEY 761 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 761 (973)
++|+..+.||+|+||.||+|+..+|+.||+|++..........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57888999999999999999998899999999965443334446788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCC
Q 039922 762 MPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEG 841 (973)
Q Consensus 762 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~ 841 (973)
++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (288)
T 1ob3_A 82 LD-QDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV- 154 (288)
T ss_dssp CS-EEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred cC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc-
Confidence 97 59999887543 3588999999999999999999999 99999999999999999999999999998764322
Q ss_pred CccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcc
Q 039922 842 QSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDL 920 (973)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 920 (973)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||... ...+....+............ ...
T Consensus 155 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~-~~~ 228 (288)
T 1ob3_A 155 ---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV--SEADQLMRIFRILGTPNSKNW-PNV 228 (288)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCTTTS-TTG
T ss_pred ---cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHCCCChhhc-hhh
Confidence 12234568999999999876 45899999999999999999999999753 222222222222111111110 111
Q ss_pred ccc--ccCCCCC------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 921 NQL--IDPRMDL------STCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 921 ~~~--~d~~l~~------~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+. .++.+.. ..........+.+++.+|++.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 110 1111110 00011234577899999999999999999999876
No 80
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-38 Score=351.10 Aligned_cols=249 Identities=20% Similarity=0.329 Sum_probs=205.2
Q ss_pred CCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEecc
Q 039922 684 LTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEYM 762 (973)
Q Consensus 684 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 762 (973)
|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 556678999999999999987 79999999995433 344567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCC
Q 039922 763 PNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQ 842 (973)
Q Consensus 763 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~ 842 (973)
++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 125 ~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 196 (321)
T 2c30_A 125 QGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP- 196 (321)
T ss_dssp CSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-
T ss_pred CCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-
Confidence 999999998643 489999999999999999999999 999999999999999999999999999877644322
Q ss_pred ccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccc
Q 039922 843 SDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQ 922 (973)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 922 (973)
......||+.|+|||++.+..++.++||||||+++|||++|+.||... ........+......
T Consensus 197 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~------------ 259 (321)
T 2c30_A 197 ---KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQAMKRLRDSPPP------------ 259 (321)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCC------------
T ss_pred ---ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCCCC------------
Confidence 123457999999999999999999999999999999999999999753 222333332221111
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 923 LIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 923 ~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.+. ........+.+++.+|++.||++|||+.|++++-
T Consensus 260 ----~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 260 ----KLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp ----CCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred ----CcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000 0011235688999999999999999999999863
No 81
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.9e-39 Score=347.78 Aligned_cols=255 Identities=24% Similarity=0.354 Sum_probs=207.4
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|+..+.||+|+||.||+++..+++.||+|++.... ...+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC---CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 45788899999999999999999988899999995332 234668999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 100 YMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred ccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999999976432 589999999999999999999999 99999999999999999999999999998664322
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||... ........+........+
T Consensus 175 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~------ 243 (283)
T 3gen_A 175 Y---TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLYRP------ 243 (283)
T ss_dssp H---HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCCCC------
T ss_pred c---ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--ChhHHHHHHhcccCCCCC------
Confidence 1 11233456788999999998899999999999999999998 99999753 222333332222111000
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++|||+.|++++|+..
T Consensus 244 ---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 244 ---------------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp ---------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 01135688999999999999999999999999875
No 82
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=362.05 Aligned_cols=262 Identities=25% Similarity=0.359 Sum_probs=212.3
Q ss_pred ccCCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD 753 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 753 (973)
..++|+..+.||+|+||.||+|++. +++.||||++... ........+.+|+.++++++||||+++++++...+
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 3467889999999999999999853 5678999998532 33455567889999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC---ceE
Q 039922 754 FNILVYEYMPNGSLADMLHEKGR----SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM---VPR 826 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~k 826 (973)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 99999999999999999976532 23588999999999999999999999 999999999999999555 599
Q ss_pred EeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHH
Q 039922 827 VADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVT 905 (973)
Q Consensus 827 l~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~ 905 (973)
|+|||+++........ .......||+.|+|||++.++.++.++|||||||++|||++ |..||... ...+....+.
T Consensus 225 L~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~ 300 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYY--RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVT 300 (367)
T ss_dssp ECCCHHHHHHHHHSSC--TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHH
T ss_pred ECCCcccccccccccc--ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHH
Confidence 9999999876443321 22334567899999999999999999999999999999998 99998753 3344444443
Q ss_pred HHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 906 EATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 906 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.......+ ......+.+++.+|++.||++||++.||+++|+...
T Consensus 301 ~~~~~~~~---------------------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 301 SGGRMDPP---------------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCC---------------------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 32211111 112346889999999999999999999999998754
No 83
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3e-38 Score=343.85 Aligned_cols=263 Identities=26% Similarity=0.369 Sum_probs=208.0
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
.+.++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++..++..|
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 87 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY 87 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence 34568999999999999999999976 789999999855433 3345577899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 88 lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 88 LVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999999997654 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||.... ... ..........+.
T Consensus 162 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~---~~~~~~~~~~~~-- 231 (294)
T 4eqm_A 162 SETSL---TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--AVS---IAIKHIQDSVPN-- 231 (294)
T ss_dssp ----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--HHH---HHHHHHSSCCCC--
T ss_pred ccccc---cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--hHH---HHHHHhhccCCC--
Confidence 43321 12234568999999999999999999999999999999999999997532 111 111111110000
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhhc
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-SMRRVVELLRVD 969 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~ 969 (973)
...- ........+.+++.+|+++||++|| +++++.+.|+..
T Consensus 232 ---~~~~---------~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 232 ---VTTD---------VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp ---HHHH---------SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred ---cchh---------cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 0000 0012246788999999999999998 999999999874
No 84
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.2e-38 Score=344.05 Aligned_cols=254 Identities=31% Similarity=0.480 Sum_probs=204.6
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhH-----HHHHHHHHHHhcCCCCCeeeEEeEEecCCe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETE-----TVFRSEIETLGRVRHGNVVKLLMCCSGQDF 754 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 754 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467889999999999999999985 78999999986544332222 67899999999999999999999987655
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEeCCCCCCEEeCCCCc-----eEE
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPA--IVHRDVKSHNILLDAEMV-----PRV 827 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl 827 (973)
++||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 69999999999999886543 3689999999999999999999999 8 999999999999988776 999
Q ss_pred eccCcchhccccCCCccccccccccccCcccccccc--CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAY--TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVT 905 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~ 905 (973)
+|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||.............+.
T Consensus 171 ~Dfg~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 243 (287)
T 4f0f_A 171 ADFGLSQQSVH-------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243 (287)
T ss_dssp CCCTTCBCCSS-------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH
T ss_pred CCCCccccccc-------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh
Confidence 99999874322 233467899999999983 456788999999999999999999999764333332233332
Q ss_pred HHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhh
Q 039922 906 EATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRV 968 (973)
Q Consensus 906 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 968 (973)
...... .+ .......+.+++.+|++.||++|||+.|+++.|++
T Consensus 244 ~~~~~~---------------~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 EEGLRP---------------TI-----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HSCCCC---------------CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ccCCCC---------------CC-----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 221110 00 01223578899999999999999999999999986
No 85
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.3e-39 Score=357.54 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=202.8
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC-----
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD----- 753 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 753 (973)
+.++|+..+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|++++++++||||++++++|.+.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3457888999999999999999987 89999999996443 3445677999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEeccCCCChhhhhhccCCCCCCC
Q 039922 754 ----------------------------------------------------FNILVYEYMPNGSLADMLHEKGRSGSLD 781 (973)
Q Consensus 754 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~ 781 (973)
..++||||+++|+|.+++.........+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 3799999999999999998766555567
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCc--------cccccccccc
Q 039922 782 WSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQS--------DDAMSCVAGS 853 (973)
Q Consensus 782 ~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~--------~~~~~~~~gt 853 (973)
+..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......... ........||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 778999999999999999999 99999999999999999999999999998765442211 1122345799
Q ss_pred cCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCC
Q 039922 854 YGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTC 933 (973)
Q Consensus 854 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~ 933 (973)
+.|+|||++.+..++.++||||+||++|||++|..|+.. .............+ ..
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~~~~------------------~~ 294 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNLKFP------------------LL 294 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTTCCC------------------HH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhccCCC------------------cc
Confidence 999999999999999999999999999999998765421 11111111111000 01
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 934 DYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 934 ~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.......+.+++.+|+++||++|||+.|++++
T Consensus 295 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred cccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 12334567899999999999999999999975
No 86
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=355.56 Aligned_cols=263 Identities=27% Similarity=0.431 Sum_probs=213.2
Q ss_pred ccCCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD 753 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 753 (973)
..++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.++++++||||+++++++..++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 3467889999999999999999975 34789999996432 3445677999999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCC
Q 039922 754 FNILVYEYMPNGSLADMLHEKGR---------------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDV 812 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl 812 (973)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 99999999999999999976421 13689999999999999999999999 9999999
Q ss_pred CCCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCC
Q 039922 813 KSHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPND 891 (973)
Q Consensus 813 kp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~ 891 (973)
||+||++++++.+||+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYY--KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCB--C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccc--cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999876443221 12234567889999999998899999999999999999999 999997
Q ss_pred CCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 892 PSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
.. ...+....+........+ ......+.+++.+|++.||++||++.||+++|++...
T Consensus 279 ~~--~~~~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 279 GM--AHEEVIYYVRDGNILACP---------------------ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp TS--CHHHHHHHHHTTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CC--ChHHHHHHHhCCCcCCCC---------------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 53 233333333322111000 1123568899999999999999999999999988643
No 87
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=359.56 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=212.4
Q ss_pred cCCCCccccccccCCeeEEEEEEC--------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEec
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK--------SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSG 751 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 751 (973)
.++|...+.||+|+||.||+|+.. .++.||+|++... ......+.+.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 457888999999999999999863 3457999999544 3344557789999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEE
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGR-------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNIL 818 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 818 (973)
++..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999976532 13589999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCc
Q 039922 819 LDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGEN 897 (973)
Q Consensus 819 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~ 897 (973)
+++++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |..||... ..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~ 299 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PV 299 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTT--CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CH
T ss_pred EcCCCcEEEcccCccccccccccc--ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CH
Confidence 999999999999999876543221 12233567889999999999999999999999999999999 99998653 33
Q ss_pred hhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 898 KDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.++.+.+........+ ......+.+++.+|++.||++|||+.||+++|+..
T Consensus 300 ~~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 300 EELFKLLKEGHRMDKP---------------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp HHHHHHHHTTCCCCCC---------------------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCC---------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 3444433332211110 11235688999999999999999999999999875
No 88
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.1e-38 Score=343.69 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=211.8
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
.+.++|+..+.||+|+||.||+|..+ +|+.||+|++..........+.+.+|+.++++++||||+++++++..++..++
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 34578999999999999999999876 68999999997655555666778999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc---eEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV---PRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGl~~ 834 (973)
||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999998887653 489999999999999999999999 9999999999999987655 9999999997
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+.......+..
T Consensus 157 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~ 229 (284)
T 3kk8_A 157 EVNDSE-----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSP 229 (284)
T ss_dssp ECCSSC-----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTT
T ss_pred EcccCc-----cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC--chhHHHHHHHhccccCCch
Confidence 654322 223467899999999999999999999999999999999999999753 3333444333332221110
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. ......+.+++.+|+++||++|||+.|++++
T Consensus 230 ------------~~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 ------------EW------DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ------------TT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ------------hh------cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 1123568899999999999999999999875
No 89
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.5e-39 Score=360.24 Aligned_cols=259 Identities=19% Similarity=0.241 Sum_probs=207.3
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC---CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT---HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF 754 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 754 (973)
.+.++|+..+.||+|+||.||+|+.+ +|+.||+|++.... ......+.+.+|+.+++.++||||+++++++..++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 34467899999999999999999876 78999999984321 112245678999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc---eEEecc
Q 039922 755 NILVYEYMPNGSLADMLHEKG-RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV---PRVADF 830 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df 830 (973)
.|+||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+||
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecC
Confidence 999999999999988876432 223588999999999999999999999 9999999999999987654 999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhcc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLS 910 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 910 (973)
|+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.. ........+......
T Consensus 178 g~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~---~~~~~~~~i~~~~~~ 250 (351)
T 3c0i_A 178 GVAIQLGESGL----VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG---TKERLFEGIIKGKYK 250 (351)
T ss_dssp TTCEECCTTSC----BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS---SHHHHHHHHHHTCCC
T ss_pred cceeEecCCCe----eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC---cHHHHHHHHHcCCCC
Confidence 99987644321 12345799999999999999999999999999999999999999975 223333333332211
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.. . ......+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~~~~--------~----------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 MNPRQ--------W----------SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CCHHH--------H----------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCccc--------c----------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 10000 0 0123578899999999999999999999875
No 90
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=347.82 Aligned_cols=248 Identities=24% Similarity=0.303 Sum_probs=205.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|..+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356888999999999999999986 799999999853321 112345678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999998643 488999999999999999999999 999999999999999999999999999986532
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+
T Consensus 159 ~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~p------ 223 (318)
T 1fot_A 159 V-------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNAELRFP------ 223 (318)
T ss_dssp C-------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHCCCCCC------
T ss_pred c-------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCC------
Confidence 2 23357999999999999999999999999999999999999999753 22333333322211100
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-----SMRRVVEL 965 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 965 (973)
......+.+++.+|++.||++|| ++.|+++|
T Consensus 224 ----------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 ----------------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----------------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----------------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 11135678999999999999999 89998865
No 91
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=357.68 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=202.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
.++|+..++||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467899999999999999999976 689999999954321 223345678899999988 69999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999997654 489999999999999999999999 99999999999999999999999999997533
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+..+.+.......+
T Consensus 176 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~p----- 244 (353)
T 3txo_A 176 CNG----VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAILNDEVVYP----- 244 (353)
T ss_dssp C-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC-----
T ss_pred cCC----ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC-----
Confidence 221 2234467999999999999999999999999999999999999999753 33444444433221100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSM------RRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~~ 965 (973)
......+.+++.+|+++||++||++ .|+++|
T Consensus 245 -----------------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 245 -----------------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp -----------------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred -----------------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0123567889999999999999998 777764
No 92
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=351.01 Aligned_cols=273 Identities=27% Similarity=0.344 Sum_probs=206.2
Q ss_pred ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC--CCCCeeeEEeEEecC---
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRV--RHGNVVKLLMCCSGQ--- 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~--- 752 (973)
..+.++|+..+.||+|+||.||+|+.. |+.||||++.. .....+.+|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT-----TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG-----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec-----cccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 445678999999999999999999987 89999999832 2233445555555554 899999999999876
Q ss_pred -CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEeCCCCCCEEeCCCCceE
Q 039922 753 -DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC-----VPAIVHRDVKSHNILLDAEMVPR 826 (973)
Q Consensus 753 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~ivH~Dlkp~NIll~~~~~~k 826 (973)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.. .++|+||||||+||+++.++.+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 7889999999999999999754 4899999999999999999999762 33899999999999999999999
Q ss_pred EeccCcchhccccCCCccccccccccccCccccccccCCCCCCC------CChhhHHHHHHHHHcC----------CCCC
Q 039922 827 VADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEK------SDVYSFGVVLMELVTG----------KRPN 890 (973)
Q Consensus 827 l~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~~l~elltg----------~~p~ 890 (973)
|+|||+++.................||+.|+|||++.+...+.+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997765443322222334679999999999988777665 9999999999999999 6666
Q ss_pred CCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 891 DPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.................... ...+.+.......+....+.+++.+|++.||++|||+.||+++|+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 330 (337)
T 3mdy_A 263 HDLVPSDPSYEDMREIVCIK------------KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330 (337)
T ss_dssp TTTSCSSCCHHHHHHHHTTS------------CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhcCCCCchhhhHHHHhhh------------ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence 54333322222222221111 011111111112356788999999999999999999999999999865
Q ss_pred cC
Q 039922 971 SS 972 (973)
Q Consensus 971 ~~ 972 (973)
.+
T Consensus 331 ~~ 332 (337)
T 3mdy_A 331 ES 332 (337)
T ss_dssp HT
T ss_pred hh
Confidence 43
No 93
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=355.35 Aligned_cols=252 Identities=23% Similarity=0.298 Sum_probs=205.1
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+.+|+.+++.++|||||++++++.+.+..|+
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3567999999999999999999976 68899999985322 112334668899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 93 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999999997643 589999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCccccccccC---CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC-chhHHHHHHHHhccCCC
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYT---KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE-NKDIVRWVTEATLSSPE 913 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 913 (973)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .......+.......+
T Consensus 167 ~~~-----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p- 240 (384)
T 4fr4_A 167 RET-----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP- 240 (384)
T ss_dssp TTC-----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC-
T ss_pred CCC-----ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC-
Confidence 322 2344679999999999864 45899999999999999999999999754222 2222232222111100
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPS-MRRVVE 964 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~evl~ 964 (973)
......+.+++.+|++.||++||+ +.+|.+
T Consensus 241 ---------------------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 ---------------------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---------------------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---------------------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 112356889999999999999998 777765
No 94
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-38 Score=342.30 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=211.3
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEec
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEY 761 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 761 (973)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 4688899999999999999999889999999995433 2346789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCC
Q 039922 762 MPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEG 841 (973)
Q Consensus 762 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~ 841 (973)
+++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ- 158 (267)
T ss_dssp CTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred CCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence 99999999997643 2588999999999999999999999 99999999999999999999999999998654321
Q ss_pred CccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCcc
Q 039922 842 QSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDL 920 (973)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 920 (973)
........++..|+|||++.+..++.++||||+|+++|||++ |+.||... ........+.......
T Consensus 159 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~~~--------- 225 (267)
T 3t9t_A 159 --YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY--------- 225 (267)
T ss_dssp --HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC---------
T ss_pred --ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCcCC---------
Confidence 111223456788999999998899999999999999999999 89898753 2333333332221110
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcccC
Q 039922 921 NQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKSS 972 (973)
Q Consensus 921 ~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 972 (973)
.+ ......+.+++.+|++.||++||++.|++++|++...+
T Consensus 226 ----~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 226 ----KP--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ----CC--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CC--------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00 11235688999999999999999999999999987543
No 95
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=352.27 Aligned_cols=262 Identities=25% Similarity=0.306 Sum_probs=196.5
Q ss_pred cCCCCccccccccCCeeEEEEEECCC----CEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee-
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSG----ETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN- 755 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~- 755 (973)
.++|+..+.||+|+||.||+|+.... ..||||++..........+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 45799999999999999999987633 2799999966554556677899999999999999999999999877665
Q ss_pred -----EEEEeccCCCChhhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEE
Q 039922 756 -----ILVYEYMPNGSLADMLHEKGR---SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRV 827 (973)
Q Consensus 756 -----~lv~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 827 (973)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999865432 12588999999999999999999999 9999999999999999999999
Q ss_pred eccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTE 906 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 906 (973)
+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||... ...+....+..
T Consensus 179 ~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~ 254 (323)
T 3qup_A 179 ADFGLSRKIYSGDYY--RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI--ENAEIYNYLIG 254 (323)
T ss_dssp CCCCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHT
T ss_pred eeccccccccccccc--cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc--ChHHHHHHHhc
Confidence 999999876443321 12223456788999999999999999999999999999999 89998753 23333333332
Q ss_pred HhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 907 ATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 907 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
...... .......+.+++.+|++.||++|||+.|+++.|++..
T Consensus 255 ~~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 255 GNRLKQ---------------------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp TCCCCC---------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCC---------------------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 221100 0112356889999999999999999999999998753
No 96
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-38 Score=347.82 Aligned_cols=266 Identities=28% Similarity=0.368 Sum_probs=204.4
Q ss_pred cCCCCccccccccCCeeEEEEEE-----CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC--C
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL-----KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ--D 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 753 (973)
.++|+..+.||+|+||.||+|++ .+++.||||++. .......+.+.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEES--CCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcc--cCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 45788999999999999999984 268899999994 33445567789999999999999999999998653 4
Q ss_pred eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcc
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLA 833 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~ 833 (973)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 58999999999999999976532 489999999999999999999999 9999999999999999999999999999
Q ss_pred hhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC----------CchhHHHH
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG----------ENKDIVRW 903 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~----------~~~~~~~~ 903 (973)
+........ ........++..|+|||++.+..++.++||||||+++|||++|..|+..... ........
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 162 KVLPQDKEF-FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp C--------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred ccccCCcce-eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 876543321 1122334577889999999999999999999999999999999999864210 00011111
Q ss_pred HHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 904 VTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
+........ ... ........+.+++.+|++.||++|||+.|+++.|+.+..
T Consensus 241 ~~~~~~~~~--------------~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 241 LIELLKNNG--------------RLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHHTTC--------------CCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccC--------------cCC---CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 111111100 000 011224678899999999999999999999999988653
No 97
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=347.04 Aligned_cols=252 Identities=24% Similarity=0.303 Sum_probs=197.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc------------------------hhHHHHHHHHHHHh
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP------------------------ETETVFRSEIETLG 735 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~ 735 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 567999999999999999999876 68899999986443211 12356889999999
Q ss_pred cCCCCCeeeEEeEEec--CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCC
Q 039922 736 RVRHGNVVKLLMCCSG--QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVK 813 (973)
Q Consensus 736 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 813 (973)
+++||||+++++++.. .+..++||||+++++|.+++.. ..+++..+..++.||+.||+|||+. +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 6788999999999999886543 2589999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCC---CCCCCChhhHHHHHHHHHcCCCCC
Q 039922 814 SHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKK---VTEKSDVYSFGVVLMELVTGKRPN 890 (973)
Q Consensus 814 p~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~p~ 890 (973)
|+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf 240 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDA----LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSC----EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccc----cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 9999999999999999999987643321 233457999999999987665 377899999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 891 DPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
... ........+.......+ + .......+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~--~~~~~~~~~~~~~~~~~------------~--------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 241 MDE--RIMCLHSKIKSQALEFP------------D--------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp CCS--SHHHHHHHHHHCCCCCC------------S--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred CCc--cHHHHHHHHhcccCCCC------------C--------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 752 22222222222111100 0 01123568899999999999999999999865
No 98
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.9e-38 Score=349.31 Aligned_cols=261 Identities=27% Similarity=0.357 Sum_probs=212.9
Q ss_pred cCCCCccccccccCCeeEEEEEE------CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL------KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF 754 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 754 (973)
.++|...+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|++++++++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45788899999999999999986 245789999996432 34555778999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCC
Q 039922 755 NILVYEYMPNGSLADMLHEKGR---------------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVK 813 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 813 (973)
.++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999986532 12488999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCC
Q 039922 814 SHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDP 892 (973)
Q Consensus 814 p~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~ 892 (973)
|+||++++++.+||+|||+++........ .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSY--VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCE--ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred hheEEEcCCCCEEEccccccccccccccc--eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999866443321 12233457788999999999899999999999999999999 9999975
Q ss_pred CCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 893 SFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
. ........+........+ ......+.+++.+|++.||++||++.|++++|+.+.
T Consensus 256 ~--~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 256 I--PPERLFNLLKTGHRMERP---------------------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp C--CGGGHHHHHHTTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C--CHHHHHHHhhcCCcCCCC---------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3 233444433332211000 112356889999999999999999999999998754
No 99
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=348.69 Aligned_cols=254 Identities=31% Similarity=0.447 Sum_probs=198.1
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEec
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEY 761 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 761 (973)
++|+..+.||+|+||.||+|+.. ++.||+|++.. ....+.+.+|++++++++||||+++++++. +..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 46788899999999999999986 78999999842 245567899999999999999999999876 347999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc-eEEeccCcchhccccC
Q 039922 762 MPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV-PRVADFGLAKALQSQE 840 (973)
Q Consensus 762 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfGl~~~~~~~~ 840 (973)
+++|+|.+++........+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 999999999986544335788999999999999999999932128999999999999998886 799999999765322
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDL 920 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 920 (973)
.....||..|+|||++.+..++.++||||||+++|||++|+.||.............+......
T Consensus 160 ------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 223 (307)
T 2eva_A 160 ------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP---------- 223 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC----------
T ss_pred ------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC----------
Confidence 2234689999999999999999999999999999999999999975432222222211111110
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 921 NQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 921 ~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
... ......+.+++.+|++.||++|||+.|++++|+...
T Consensus 224 -~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 224 -PLI----------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp -CCB----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred -Ccc----------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 000 112356789999999999999999999999998753
No 100
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-38 Score=352.78 Aligned_cols=256 Identities=26% Similarity=0.366 Sum_probs=201.5
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCE----EEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGET----VAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
++|+..++||+|+||+||+|++. +++. ||+|++.... .....+.+.+|+.++++++||||+++++++..++ .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 46888999999999999999865 4443 5888774332 3345577899999999999999999999998765 77
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+|+||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 89999999999999987533 589999999999999999999999 9999999999999999999999999999877
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
...... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||... ....+...+........+
T Consensus 168 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~~~-- 241 (327)
T 3poz_A 168 GAEEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQP-- 241 (327)
T ss_dssp TTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCCCCC--
T ss_pred cCCccc--ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC--CHHHHHHHHHcCCCCCCC--
Confidence 544322 12233456889999999999999999999999999999999 99999753 333444443332211100
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++||++.|++++|+..
T Consensus 242 -------------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 242 -------------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp -------------------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred -------------------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11235688999999999999999999999999764
No 101
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.3e-39 Score=369.51 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=210.6
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|+..+.||+|+||.||+|++++++.||||++.... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 45678889999999999999999889999999995432 34667999999999999999999999986 567899999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred ecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 9999999999975421 2478889999999999999999999 99999999999999999999999999998764321
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. .......++..|+|||++..+.++.++|||||||++|||++ |+.||... ...++.+.+........+
T Consensus 339 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~~~~------ 407 (454)
T 1qcf_A 339 Y---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYRMPRP------ 407 (454)
T ss_dssp H---HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHTCCCCCC------
T ss_pred e---eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC------
Confidence 1 11222346788999999998999999999999999999999 99999753 334444444433221111
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
......+.+++.+|++.||++|||+.+|++.|+....
T Consensus 408 ---------------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 408 ---------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ---------------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 1123568899999999999999999999999998643
No 102
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2e-38 Score=341.26 Aligned_cols=255 Identities=25% Similarity=0.358 Sum_probs=208.4
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC--CeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ--DFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 758 (973)
.++|+..+.||+|+||.||+|++. ++.||+|++..........+.+.+|+.++++++||||+++++++... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457889999999999999999986 89999999976655666677899999999999999999999999887 788999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPA--IVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+. + ++||||||+||++++++.++++|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred ecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999999998643 22589999999999999999999998 8 999999999999999999999999887543
Q ss_pred cccCCCccccccccccccCccccccccCCCCCC---CCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTE---KSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.. ....||+.|+|||++.+..++. ++||||||+++|||++|+.||... ........+......
T Consensus 164 ~~---------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~--- 229 (271)
T 3kmu_A 164 QS---------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--SNMEIGMKVALEGLR--- 229 (271)
T ss_dssp SC---------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--CHHHHHHHHHHSCCC---
T ss_pred cc---------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--ChHHHHHHHHhcCCC---
Confidence 21 2246789999999998766554 799999999999999999999753 222222222111111
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
+.+. ......+.+++.+|++.||++|||+.|+++.|+..+.
T Consensus 230 ------------~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 ------------PTIP-----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ------------CCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ------------CCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0000 1123568899999999999999999999999998653
No 103
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.4e-39 Score=358.94 Aligned_cols=262 Identities=27% Similarity=0.367 Sum_probs=210.0
Q ss_pred cCCCCccccccccCCeeEEEEEE------CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL------KSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQD 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 753 (973)
.++|+..+.||+|+||.||+|++ .+++.||||++... ......+.+.+|+++++++ +||||+++++++...+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 46789999999999999999974 25678999999543 2344556789999999999 7899999999998755
Q ss_pred -eeEEEEeccCCCChhhhhhccCC--------------------------------------------------------
Q 039922 754 -FNILVYEYMPNGSLADMLHEKGR-------------------------------------------------------- 776 (973)
Q Consensus 754 -~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 776 (973)
..++||||+++|+|.++++....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 48999999999999999976432
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCccccccc
Q 039922 777 -------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSC 849 (973)
Q Consensus 777 -------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~ 849 (973)
...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~ 254 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY--VRKGD 254 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC--EEC--
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc--hhccc
Confidence 11288999999999999999999999 9999999999999999999999999999866443321 22334
Q ss_pred cccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCC
Q 039922 850 VAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRM 928 (973)
Q Consensus 850 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 928 (973)
..||..|+|||++.+..++.++|||||||++|||++ |+.||.... ........+........+
T Consensus 255 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~--------------- 318 (359)
T 3vhe_A 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-IDEEFCRRLKEGTRMRAP--------------- 318 (359)
T ss_dssp CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-CSHHHHHHHHHTCCCCCC---------------
T ss_pred cCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc-hhHHHHHHHHcCCCCCCC---------------
Confidence 568899999999999999999999999999999998 999997542 223333333332211110
Q ss_pred CCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 929 DLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 929 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+.+++.+|+++||++|||+.||+++|+...
T Consensus 319 ------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 319 ------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp ------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 012356889999999999999999999999998754
No 104
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.7e-37 Score=359.36 Aligned_cols=235 Identities=23% Similarity=0.342 Sum_probs=109.5
Q ss_pred CccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccE
Q 039922 94 RIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKV 173 (973)
Q Consensus 94 ~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 173 (973)
.+++|+.|++++|.+. .++ .+..+++|++|+|++|.+.+..+ +..+++|++|++++|.+++..| ++++++|++
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~--~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HhccccEEecCCCCCc-cCc--chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 3556666666666655 233 24445555555555555444332 4455555555555555543322 455555555
Q ss_pred EecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCc
Q 039922 174 LNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNF 253 (973)
Q Consensus 174 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 253 (973)
|+|++|++++..+ +.++++|++|++++|.++.. + .++++++|++|+++ |.
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--------------------------~-~~~~l~~L~~L~l~-~~ 166 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--------------------------S-ALSGLTSLQQLSFG-NQ 166 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--------------------------G-GGTTCTTCSEEEEE-ES
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCC--------------------------h-hhccCCcccEeecC-Cc
Confidence 5555555544322 44455555555554444321 1 24455556666654 33
Q ss_pred ccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccc
Q 039922 254 LSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESL 333 (973)
Q Consensus 254 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 333 (973)
+.+..+ +.++++|++|++++|++++. ..+..+++|+.|++++|.+++..| .....+|+.|++++|++++. ..+
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l 239 (466)
T 1o6v_A 167 VTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI--GTL 239 (466)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC--GGG
T ss_pred ccCchh--hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc--hhh
Confidence 332222 55555666666666655532 234555555555555555554333 11122444444444444432 233
Q ss_pred cCCCccceeeeccccccCCCCCCccCCCCccceeeeccccc
Q 039922 334 ASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFT 374 (973)
Q Consensus 334 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 374 (973)
..+++|+.|++++|.+++..+ +..+++|++|++++|+++
T Consensus 240 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 278 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 278 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCC
T ss_pred hcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccC
Confidence 444444444444444443222 333444444444444433
No 105
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=342.04 Aligned_cols=273 Identities=26% Similarity=0.274 Sum_probs=205.3
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC---CchhHHHHHHHHHHHhcCC---CCCeeeEEeEEecC
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH---KPETETVFRSEIETLGRVR---HGNVVKLLMCCSGQ 752 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 752 (973)
+.++|+..+.||+|+||+||+|+.. +|+.||+|++..... .......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4568999999999999999999974 789999999853321 1122345667777777665 99999999999775
Q ss_pred C-----eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEE
Q 039922 753 D-----FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRV 827 (973)
Q Consensus 753 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 827 (973)
. ..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 4 5799999996 699999976542 2489999999999999999999999 9999999999999999999999
Q ss_pred eccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 907 (973)
+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+....+...
T Consensus 162 ~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~i~~~ 234 (308)
T 3g33_A 162 ADFGLARIYSYQM-----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN--SEADQLGKIFDL 234 (308)
T ss_dssp CSCSCTTTSTTCC-----CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS--SHHHHHHHHHHH
T ss_pred eeCccccccCCCc-----ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHH
Confidence 9999998664332 234467899999999999999999999999999999999999999753 333333434333
Q ss_pred hccCCCccccCcccccccCCCCCCC-C-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLST-C-----DYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~-~-----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
....+...++... .+....+.... . .++....+.+++.+|+++||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 235 IGLPPEDDWPRDV-SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HCCCCTTTSCSSC-SSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hCCCChhhccchh-hccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 3222222221111 11111110000 0 01224678899999999999999999999876
No 106
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.2e-38 Score=364.29 Aligned_cols=252 Identities=29% Similarity=0.413 Sum_probs=206.9
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC-eeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD-FNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|++. |+.||||+++... ..+.+.+|+.++++++||||+++++++...+ ..|+||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 456888899999999999999986 7899999995432 3467899999999999999999999987655 789999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999987542 2478999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||... ...+....+..+.....+
T Consensus 343 ~-------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~~~p----- 408 (450)
T 1k9a_A 343 Q-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAP----- 408 (450)
T ss_dssp -----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS--CTTTHHHHHHTTCCCCCC-----
T ss_pred c-------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC-----
Confidence 1 12356789999999999999999999999999999998 99999753 233444444332211111
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
......+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 409 ----------------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 409 ----------------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1123578899999999999999999999999988653
No 107
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.4e-39 Score=352.84 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=202.4
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|.+.+.||+|+||.||+|+.. +|+.||+|++.+... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4578999999999999999999974 789999999853211 11223568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 789999887654 489999999999999999999999 99999999999999999999999999998664
Q ss_pred ccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ..
T Consensus 160 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~---------------- 216 (336)
T 3h4j_B 160 DGN-----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--NL---------------- 216 (336)
T ss_dssp TSB-----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--TC----------------
T ss_pred CCc-----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--HH----------------
Confidence 332 2234579999999999988776 68999999999999999999999753211 00
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...+....... .......+.+++.+|++.||.+|||+.|++++
T Consensus 217 ---~~~i~~~~~~~---p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 217 ---FKKVNSCVYVM---PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ---BCCCCSSCCCC---CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ---HHHHHcCCCCC---cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00000000000 01123567899999999999999999999875
No 108
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=350.67 Aligned_cols=248 Identities=23% Similarity=0.276 Sum_probs=197.4
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..++||+|+||+||+|+.. +|+.||||++..............+|+..+.++ +|+||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 356889999999999999999987 799999999866555555555566666666555 899999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 6799998876543 589999999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. ......||++|+|||++.+ .++.++|||||||++|||++|..|+... .. ...+.... .+
T Consensus 210 ~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~-~~~~~~~~---~~----- 270 (311)
T 3p1a_A 210 AG-----AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EG-WQQLRQGY---LP----- 270 (311)
T ss_dssp ----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HH-HHHHTTTC---CC-----
T ss_pred CC-----CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cH-HHHHhccC---CC-----
Confidence 32 1233568999999998875 7899999999999999999998776531 11 11111100 00
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.-+. ......+.+++.+|+++||++|||+.|++++
T Consensus 271 ---~~~~---------~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 ---PEFT---------AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ---HHHH---------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---cccc---------cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0000 1124678999999999999999999999875
No 109
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.9e-38 Score=358.72 Aligned_cols=280 Identities=20% Similarity=0.228 Sum_probs=209.1
Q ss_pred cCCCCcccccccc--CCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSG--GSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
.++|++.++||+| +||.||+|+.+ +|+.||||++..........+.+.+|+.++++++|||||++++++..++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578999999999 99999999987 79999999997665555666788999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999997653 23589999999999999999999999 99999999999999999999999999986543
Q ss_pred ccCC---CccccccccccccCccccccccC--CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 838 SQEG---QSDDAMSCVAGSYGYIAPEYAYT--KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 838 ~~~~---~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.... ..........||..|+|||++.+ ..++.++||||+||++|||++|+.||...... ......+........
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKLNGTVPCLL 258 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST-THHHHC---------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCccc
Confidence 2211 11112233578999999999987 67899999999999999999999999763222 222111111100000
Q ss_pred C-cccc--------------Cccccccc---C-----CCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 E-RGCC--------------RDLNQLID---P-----RMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~-~~~~--------------~~l~~~~d---~-----~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. ...+ ....+.+. + ..............+.+++.+|+++||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 0000 00000000 0 000001112234578999999999999999999999876
No 110
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=347.55 Aligned_cols=273 Identities=22% Similarity=0.285 Sum_probs=204.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 467889999999999999999986 5999999999766555556677889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999998876543 489999999999999999999999 9999999999999999999999999999776433
Q ss_pred CCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc--
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC-- 916 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 916 (973)
.. ......||..|+|||++.+ ..++.++||||+|+++|||++|+.||... ...+....+........+...
T Consensus 156 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 156 SD----YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK--SDVDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp --------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cc----ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhcccccccccc
Confidence 21 2234578999999999876 67899999999999999999999999753 222222222222111110000
Q ss_pred ---cCcc--cccccCCCCCC--CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 ---CRDL--NQLIDPRMDLS--TCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ---~~~l--~~~~d~~l~~~--~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.... ..+.++..... ...+.....+.+++.+|++.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 00000000000 0001224568899999999999999999999876
No 111
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.7e-38 Score=347.05 Aligned_cols=273 Identities=21% Similarity=0.319 Sum_probs=194.3
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.... .....+.+.+|++++++++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 357899999999999999999876 68999999996443 2233456789999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 760 EYMPNGSLADMLHEKG---RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
||++ |+|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 69999886542 123588999999999999999999999 9999999999999999999999999999866
Q ss_pred cccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||... ...+....+...........
T Consensus 159 ~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 159 GIPV----NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT--NDEEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp TSCC----CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCSCCTTT
T ss_pred CCCc----ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCChhH
Confidence 4322 12334578999999999876 46899999999999999999999999753 23333333333222111110
Q ss_pred ccCcccccc--cCCCCCC-----------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 916 CCRDLNQLI--DPRMDLS-----------TCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 916 ~~~~l~~~~--d~~l~~~-----------~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. ....... .+.+... .........+.+++.+|++.||++|||+.|++++
T Consensus 233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 233 W-PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp C-GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred h-hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 0000000 0000000 0000123578899999999999999999999876
No 112
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.5e-38 Score=343.75 Aligned_cols=264 Identities=28% Similarity=0.410 Sum_probs=202.6
Q ss_pred cccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
-..++|+..+.||+|+||.||+|+.. ..||+|++..........+.+.+|+.++++++|+||+++++++ ..+..++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 33567999999999999999999865 4699999976666666678899999999999999999999965 45668999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999996543 3589999999999999999999999 999999999999999999999999999976543
Q ss_pred cCCCccccccccccccCcccccccc---CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAY---TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
... ........||+.|+|||++. +..++.++||||+|+++|||++|+.||.... ......+.+.........
T Consensus 173 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~-- 247 (289)
T 3og7_A 173 WSG--SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDL-- 247 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHTSCCCCT--
T ss_pred ccc--cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhcccccCcch--
Confidence 222 12234467899999999986 5678889999999999999999999997532 333344444333222110
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.. ........+.+++.+|++.||++||++.|+++.|++..
T Consensus 248 -----~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 248 -----SK----------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp -----TS----------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred -----hh----------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 00 11122467899999999999999999999999998764
No 113
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.6e-38 Score=354.80 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=202.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC-chhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK-PETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
.++|+..++||+|+||.||+|+.+ +++.||+|++.+.... ....+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457889999999999999999987 6789999999654322 22334577899998877 89999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999998653 489999999999999999999999 99999999999999999999999999997532
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC-------chhHHHHHHHHhcc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE-------NKDIVRWVTEATLS 910 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~ 910 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.+......
T Consensus 205 ~~~----~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~ 280 (396)
T 4dc2_A 205 RPG----DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280 (396)
T ss_dssp CTT----CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC
T ss_pred cCC----CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC
Confidence 221 2234567999999999999999999999999999999999999999643111 11122222221111
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSM------RRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~~ 965 (973)
. . ......+.+++.+|++.||++||++ .||+++
T Consensus 281 ~-----------------p-----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 281 I-----------------P-----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp C-----------------C-----TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred C-----------------C-----CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0 0 1123567899999999999999985 677654
No 114
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.2e-38 Score=351.19 Aligned_cols=248 Identities=23% Similarity=0.265 Sum_probs=207.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467889999999999999999986 799999999853321 123345688899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998654 489999999999999999999999 999999999999999999999999999986533
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+..+.+.......+
T Consensus 194 ~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~p------ 258 (350)
T 1rdq_E 194 R-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSGKVRFP------ 258 (350)
T ss_dssp C-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC------
T ss_pred C-------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHcCCCCCC------
Confidence 2 22357999999999999999999999999999999999999999753 33333333333221100
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPS-----MRRVVEL 965 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 965 (973)
......+.+++.+|++.||++||+ +.||+++
T Consensus 259 ----------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 ----------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ----------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----------------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 012356889999999999999998 8888765
No 115
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-37 Score=357.31 Aligned_cols=342 Identities=23% Similarity=0.354 Sum_probs=206.4
Q ss_pred ceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEEC
Q 039922 73 SVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDL 152 (973)
Q Consensus 73 ~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L 152 (973)
+++.|+++++++.. +| .+..+++|++|+|++|.+++. ++ +..+++|++|++++|.+.+..+ ++.+++|++|+|
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 46667777776654 33 366777777777777777643 32 6777777777777777765544 777777777777
Q ss_pred cCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccc
Q 039922 153 SRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIG 232 (973)
Q Consensus 153 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 232 (973)
++|.+++..+ ++.+++|++|++++|.+++. + .++++++|++|+++ |.+..
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~------------------------- 169 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTD------------------------- 169 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCC-------------------------
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccC-------------------------
Confidence 7777775432 77777777777777777753 2 36777777777775 33221
Q ss_pred cCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhc
Q 039922 233 EIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAA 312 (973)
Q Consensus 233 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 312 (973)
+ ..++++++|++|++++|.+++. ..+..+++|++|++++|++++..| ++.+++|+.|++++|.+++. +.....
T Consensus 170 -~-~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l 242 (466)
T 1o6v_A 170 -L-KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-GTLASL 242 (466)
T ss_dssp -C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GGGGGC
T ss_pred -c-hhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-hhhhcC
Confidence 0 1255666777777777777643 236677777777777777775544 56677777777777777643 333333
Q ss_pred ccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhc
Q 039922 313 MSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIII 392 (973)
Q Consensus 313 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 392 (973)
.+|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-------------- 304 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP-------------- 304 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--------------
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--------------
Confidence 467777777777775544 6677777777777777775433 6667777777777776654322
Q ss_pred ccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCC
Q 039922 393 FNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGE 472 (973)
Q Consensus 393 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 472 (973)
+..+++|++|++++|++++..| +..+++|+.|++++|++++. +.+..+++|+.|++++|++++.
T Consensus 305 ------------~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 368 (466)
T 1o6v_A 305 ------------ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDL 368 (466)
T ss_dssp ------------GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBC
T ss_pred ------------hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCcc
Confidence 2333344444444444443332 33444444444444444432 2344444455555555555444
Q ss_pred CchhhhcCCcCcEEeCcCCccc
Q 039922 473 VPSQICTLRQLQAVDLSQNRFS 494 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
.| +..+++|+.|++++|+++
T Consensus 369 ~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 369 TP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp GG--GTTCTTCCEEECCCEEEE
T ss_pred ch--hhcCCCCCEEeccCCccc
Confidence 43 445555555555555555
No 116
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=355.17 Aligned_cols=254 Identities=27% Similarity=0.359 Sum_probs=192.6
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
+.+.++|+..+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|++++++++||||+++++++...+..+
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 345677999999999999999999987 68899999995332 3456889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CCceEEeccCcc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EMVPRVADFGLA 833 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGl~ 833 (973)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 125 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 9999999999999987543 489999999999999999999999 9999999999999975 889999999999
Q ss_pred hhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+......
T Consensus 199 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~i~~~~~~--- 269 (349)
T 2w4o_A 199 KIVEHQV-----LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG-DQFMFRRILNCEYY--- 269 (349)
T ss_dssp -------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-HHHHHHHHHTTCCC---
T ss_pred cccCccc-----ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-cHHHHHHHHhCCCc---
Confidence 8654322 12345789999999999999999999999999999999999999975322 22222222221111
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...+ ........+.+++.+|++.||++|||+.|++++
T Consensus 270 ---------~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 ---------FISP------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ---------CCTT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---------cCCc------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 001224578899999999999999999999986
No 117
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.8e-40 Score=358.98 Aligned_cols=266 Identities=26% Similarity=0.313 Sum_probs=190.5
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhc--CCCCCeeeEEeEEecCC----e
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGR--VRHGNVVKLLMCCSGQD----F 754 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 754 (973)
.++|+..+.||+|+||.||+|+.. |+.||||++.. .....+.+|.+++.. ++||||+++++++...+ .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC------TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc-----cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 357899999999999999999876 89999999842 234556778888877 78999999999998766 7
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEeCCCCCCEEeCCCCceE
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLH--------NDCVPAIVHRDVKSHNILLDAEMVPR 826 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 826 (973)
.++||||+++|+|.+++... .+++..++.++.|++.|++||| +. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred eEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 89999999999999999654 4778889999999999999999 77 999999999999999999999
Q ss_pred EeccCcchhccccCCCccccccccccccCccccccccCC------CCCCCCChhhHHHHHHHHHcC----------CCCC
Q 039922 827 VADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK------KVTEKSDVYSFGVVLMELVTG----------KRPN 890 (973)
Q Consensus 827 l~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~p~ 890 (973)
|+|||+++.................||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 999999977655443222223445799999999998776 344689999999999999999 5565
Q ss_pred CCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 891 DPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
................... ....+.+.......+....+.+++.+|++.||++|||+.||++.|+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 229 YDLVPSDPSVEEMRKVVCE------------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTCC-CCCCC-CHHHHTT------------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred cccCCCCccHHHHHHHHHH------------hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 4322111111111010000 0111111111222356778999999999999999999999999999865
Q ss_pred c
Q 039922 971 S 971 (973)
Q Consensus 971 ~ 971 (973)
.
T Consensus 297 ~ 297 (303)
T 3gxj_A 297 Q 297 (303)
T ss_dssp C
T ss_pred h
Confidence 3
No 118
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.1e-38 Score=369.99 Aligned_cols=257 Identities=26% Similarity=0.364 Sum_probs=211.6
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+++ +++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 346788899999999999999987 48899999995432 23567999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 296 E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp ECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 99999999999986432 3588999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. .......+++.|+|||++.++.++.++|||||||++|||++ |..||... +..++.+.+........+
T Consensus 372 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~----- 441 (495)
T 1opk_A 372 TY---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP----- 441 (495)
T ss_dssp CE---ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTCCCCCC-----
T ss_pred ce---eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC-----
Confidence 21 12223456788999999999999999999999999999999 88888753 333444444332211100
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+.+++.+||+.||++|||+.||++.|+...
T Consensus 442 ----------------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 442 ----------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----------------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 112356889999999999999999999999998753
No 119
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.9e-38 Score=348.59 Aligned_cols=253 Identities=23% Similarity=0.302 Sum_probs=204.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.+... .....+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 356888999999999999999986 688999999965432 334456688999999988 89999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++++||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999997653 489999999999999999999999 99999999999999999999999999997543
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC-------chhHHHHHHHHhcc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE-------NKDIVRWVTEATLS 910 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~ 910 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.+......
T Consensus 162 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~ 237 (345)
T 3a8x_A 162 RPG----DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237 (345)
T ss_dssp CTT----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC
T ss_pred CCC----CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC
Confidence 221 1234467999999999999999999999999999999999999999652111 11112222111110
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSM------RRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~~ 965 (973)
+. ......+.+++.+|++.||++||++ .|+++|
T Consensus 238 -----------------~p-----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 -----------------IP-----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -----------------CC-----TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -----------------CC-----CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00 1123567899999999999999985 677654
No 120
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=353.95 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=199.9
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCC--CCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRH--GNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 758 (973)
-++|++.+.||+|+||.||++...+++.||||++..........+.+.+|+.++++++| +||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 34688999999999999999999999999999997665556666789999999999986 9999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
||+ .+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 88 ~e~-~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp ECC-CSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EeC-CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 995 5789999998643 588999999999999999999999 999999999999997 67899999999987654
Q ss_pred cCCCccccccccccccCccccccccC-----------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHH
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYT-----------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 907 (973)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 160 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---- 233 (343)
T 3dbq_A 160 DTTS--VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI---- 233 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH----
T ss_pred cccc--ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHH----
Confidence 3221 12234579999999999864 678889999999999999999999997532211111111
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
....... .+. ......+.+++.+|++.||++|||+.|++++-
T Consensus 234 ~~~~~~~------------~~~-----~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 234 IDPNHEI------------EFP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HCTTSCC------------CCC-----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hcCCccc------------CCc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1110000 000 01124678999999999999999999998874
No 121
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.6e-38 Score=348.03 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=209.6
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc----hhHHHHHHHHHHHhcCCCCCeeeEEeEEecC
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP----ETETVFRSEIETLGRVRHGNVVKLLMCCSGQ 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 752 (973)
..+.++|+..+.||+|+||.||+|+.+ +|+.||+|++....... ...+.+.+|+.++++++||||+++++++...
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 445667999999999999999999986 68999999996543222 2467789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC----ceEEe
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM----VPRVA 828 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~ 828 (973)
+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred CEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEc
Confidence 99999999999999999997543 589999999999999999999999 999999999999999888 79999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
|||++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||... ...+....+....
T Consensus 162 Dfg~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~ 234 (321)
T 2a2a_A 162 DFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITSVS 234 (321)
T ss_dssp CCTTCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTC
T ss_pred cCccceecCccc-----cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcc
Confidence 999998764332 123456899999999999999999999999999999999999999753 2222222222211
Q ss_pred ccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 909 LSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 909 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...++ +.. ......+.+++.+|+++||++|||+.|++++
T Consensus 235 ~~~~~--------~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 YDFDE--------EFF----------SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCCH--------HHH----------TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cccCh--------hhh----------cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11000 000 0123568899999999999999999999875
No 122
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.4e-38 Score=338.59 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=186.1
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
....++|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 9 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (275)
T 2eue_A 9 GAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 88 (275)
T ss_dssp CCBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred CCcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeE
Confidence 445678999999999999999999865 789999999965432 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++||||+ ++++.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 89 ~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 161 (275)
T 2eue_A 89 IMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp EEEEECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC--
T ss_pred EEEehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeeccccee
Confidence 9999999 678888876543 589999999999999999999999 999999999999999999999999999976
Q ss_pred ccccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
...... .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||... ........+.......+
T Consensus 162 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~-- 232 (275)
T 2eue_A 162 MTDGNF-----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVYTLP-- 232 (275)
T ss_dssp ------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC--
T ss_pred ccCccc-----ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCC--
Confidence 543321 233568999999999987765 78999999999999999999999752 22333333333221100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
......+.+++.+|++.||++|||+.|++++
T Consensus 233 --------------------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 --------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --------------------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1123567899999999999999999999875
No 123
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-38 Score=353.31 Aligned_cols=251 Identities=22% Similarity=0.321 Sum_probs=204.6
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 756 (973)
..++|...+.||+|+||.||+|+.+ +|+.||+|++.+... .....+.+..|..+++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3567899999999999999999986 689999999954321 122345577888888876 8999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 95 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999997653 489999999999999999999999 9999999999999999999999999999754
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+..+.+......
T Consensus 169 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~------ 236 (345)
T 1xjd_A 169 MLGD----AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNPF------ 236 (345)
T ss_dssp CCTT----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC------
T ss_pred ccCC----CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhCCCC------
Confidence 3222 1234467999999999999999999999999999999999999999753 333444433332111
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMR-RVVE 964 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-evl~ 964 (973)
+. ......+.+++.+|++.||++||++. ||++
T Consensus 237 -----------~p-----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 237 -----------YP-----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp -----------CC-----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred -----------CC-----cccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 00 01135678999999999999999997 6654
No 124
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.4e-38 Score=346.51 Aligned_cols=251 Identities=21% Similarity=0.305 Sum_probs=197.2
Q ss_pred cCCCCccccccccCCeeEEEEEE----CCCCEEEEEEecCCCC--CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL----KSGETVAVKRLLGGTH--KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF 754 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 754 (973)
.++|+..+.||+|+||.||+|+. .+|+.||+|++.+... .......+.+|+.++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46789999999999999999987 4789999999965432 22334567889999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997653 478999999999999999999999 99999999999999999999999999987
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+
T Consensus 170 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~p-- 241 (327)
T 3a62_A 170 ESIHDG----TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKLNLP-- 241 (327)
T ss_dssp -------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCC--
T ss_pred ccccCC----ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCC--
Confidence 543222 1223457899999999999999999999999999999999999999753 23333333333211100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-----SMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 965 (973)
......+.+++.+|++.||++|| ++.|+++|
T Consensus 242 --------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 242 --------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --------------------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --------------------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11235678999999999999999 78888875
No 125
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=354.70 Aligned_cols=248 Identities=20% Similarity=0.284 Sum_probs=197.5
Q ss_pred ccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEeccCC
Q 039922 686 EQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEYMPN 764 (973)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 764 (973)
..+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 3578999999999999875 7999999999533 334567789999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe--CCCCceEEeccCcchhccccCCC
Q 039922 765 GSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL--DAEMVPRVADFGLAKALQSQEGQ 842 (973)
Q Consensus 765 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfGl~~~~~~~~~~ 842 (973)
|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++ ++++.+||+|||+++.......
T Consensus 171 ~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 171 GELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp CEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 99999886542 2588999999999999999999999 99999999999999 6778999999999987643321
Q ss_pred ccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccc
Q 039922 843 SDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQ 922 (973)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 922 (973)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.......+.
T Consensus 245 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~~~--------- 309 (373)
T 2x4f_A 245 ----LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--NDAETLNNILACRWDLED--------- 309 (373)
T ss_dssp ----CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCSCS---------
T ss_pred ----cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccCCCCh---------
Confidence 23356999999999999999999999999999999999999999753 222333323222111000
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 923 LIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 923 ~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
... ......+.+++.+|+++||++|||+.|++++
T Consensus 310 ---~~~------~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 310 ---EEF------QDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ---GGG------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---hhh------ccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 1123578899999999999999999999874
No 126
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4e-39 Score=350.22 Aligned_cols=253 Identities=21% Similarity=0.323 Sum_probs=202.7
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CC-------CEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SG-------ETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ 752 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 752 (973)
.++|+..+.||+|+||.||+|+.. ++ +.||+|++.. ......+.+.+|++++++++||||+++++++..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK--AHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG--GGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc--ccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 356888999999999999999876 23 4799999843 3345567799999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc--------
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV-------- 824 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-------- 824 (973)
+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999986432 488999999999999999999999 9999999999999998887
Q ss_pred eEEeccCcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHH
Q 039922 825 PRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRW 903 (973)
Q Consensus 825 ~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~ 903 (973)
+||+|||.+...... ....||..|+|||++.+ ..++.++||||+|+++|||++|+.|+..... .......
T Consensus 160 ~kl~Dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-~~~~~~~ 230 (289)
T 4fvq_A 160 IKLSDPGISITVLPK--------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-SQRKLQF 230 (289)
T ss_dssp EEECCCCSCTTTSCH--------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHH
T ss_pred eeeccCcccccccCc--------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-hHHHHHH
Confidence 999999998754221 22457889999999987 7789999999999999999997666654322 1111211
Q ss_pred HHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcccC
Q 039922 904 VTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKSS 972 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 972 (973)
. ...... +. .....+.+++.+|+++||++|||+.|++++|++...+
T Consensus 231 ~-~~~~~~-~~---------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 231 Y-EDRHQL-PA---------------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp H-HTTCCC-CC---------------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred h-hccCCC-CC---------------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1 111110 00 0013467899999999999999999999999987654
No 127
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.4e-38 Score=341.35 Aligned_cols=257 Identities=23% Similarity=0.295 Sum_probs=198.2
Q ss_pred ccCCCCccccccccCCeeEEEEEECC----CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLKS----GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
..++|+..+.||+|+||.||+|++.. +..||+|++... ......+.+.+|+..+++++||||+++++++. ++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 34678899999999999999998753 457999988533 23455677899999999999999999999984 5678
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999997643 2589999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
....... ......+++.|+|||++.+..++.++||||+|+++|||++ |..||... ...+....+........
T Consensus 166 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~--~~~~~~~~i~~~~~~~~-- 238 (281)
T 1mp8_A 166 MEDSTYY---KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERLPM-- 238 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCCCC--
T ss_pred cCccccc---ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC--CHHHHHHHHHcCCCCCC--
Confidence 6443221 1223456788999999998899999999999999999997 88999753 23344444332211100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.......+.+++.+|++.||++|||+.|++++|+.+
T Consensus 239 -------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 239 -------------------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp -------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011235688999999999999999999999999875
No 128
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=352.18 Aligned_cols=262 Identities=24% Similarity=0.364 Sum_probs=209.5
Q ss_pred cCCCCccccccccCCeeEEEEEE------CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL------KSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQD 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 753 (973)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 46788999999999999999986 246689999996432 233446788999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhccCCC--------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCC
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRS--------------------GSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVK 813 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 813 (973)
..++||||+++|+|.+++...... ..+++..++.++.||+.||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999765321 2378999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCC
Q 039922 814 SHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDP 892 (973)
Q Consensus 814 p~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~ 892 (973)
|+||+++.++.+||+|||++......... .......||+.|+|||++.++.++.++||||||+++|||++ |..||..
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNY--VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccc--eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999999999999999876544321 22334567889999999999999999999999999999998 9999975
Q ss_pred CCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 893 SFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.. ........+........+ ......+.+++.+|++.||++|||+.|++++|+...
T Consensus 278 ~~-~~~~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 278 IP-VDANFYKLIQNGFKMDQP---------------------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp CC-CSHHHHHHHHTTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CC-cHHHHHHHHhcCCCCCCC---------------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 42 223333333222111000 112356889999999999999999999999998754
No 129
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.2e-38 Score=348.87 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=212.5
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG 751 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 751 (973)
+...++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+.+|+.++++++||||+++++++..
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 344567999999999999999999765 36789999995332 33455678999999999999999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKG-------RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV 824 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 824 (973)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+||++++++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCe
Confidence 999999999999999999987532 113568999999999999999999999 9999999999999999999
Q ss_pred eEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHH
Q 039922 825 PRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRW 903 (973)
Q Consensus 825 ~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~ 903 (973)
+||+|||+++........ .......+|+.|+|||++.+..++.++||||+|+++|||++ |..||... ...+....
T Consensus 177 ~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~ 252 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYY--RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRF 252 (322)
T ss_dssp EEECCTTCCCGGGGGGCE--EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHH
T ss_pred EEECcCcccccccccccc--ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHH
Confidence 999999999866443221 12233456889999999999999999999999999999999 88888652 23333333
Q ss_pred HHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 904 VTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
+........ .......+.+++.+|++.||++|||+.|++++|++..
T Consensus 253 ~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 253 VMEGGLLDK---------------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHTTCCCCC---------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHcCCcCCC---------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 322211100 0112356889999999999999999999999998753
No 130
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.9e-38 Score=349.62 Aligned_cols=279 Identities=21% Similarity=0.270 Sum_probs=212.9
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec------
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG------ 751 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 751 (973)
...++|+..+.||+|+||.||+|+.. +|+.||+|++............+.+|+.++++++||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 34578999999999999999999985 79999999996655555555678899999999999999999999876
Q ss_pred --CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEec
Q 039922 752 --QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVAD 829 (973)
Q Consensus 752 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 829 (973)
.+..++||||++ |++.+.+..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCE-HDLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccC-CCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 446899999997 578777765432 589999999999999999999999 999999999999999999999999
Q ss_pred cCcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 830 FGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 830 fGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
||+++.+...............||+.|+|||++.+ ..++.++||||+||++|||++|+.||... ........+....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~ 245 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQLALISQLC 245 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHh
Confidence 99998775444333344455678999999998876 45799999999999999999999999763 3334444444433
Q ss_pred ccCCCccccCc-ccccccCC--CCCCCCCH-HH------HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 909 LSSPERGCCRD-LNQLIDPR--MDLSTCDY-EE------AEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 909 ~~~~~~~~~~~-l~~~~d~~--l~~~~~~~-~~------~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...++...+.. -.+..+.. ........ +. ...+.+++.+|++.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 33222211110 00111100 00001111 11 2458899999999999999999999986
No 131
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.5e-38 Score=350.86 Aligned_cols=268 Identities=26% Similarity=0.308 Sum_probs=211.1
Q ss_pred ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhc--CCCCCeeeEEeEEecCC--
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGR--VRHGNVVKLLMCCSGQD-- 753 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~-- 753 (973)
..+.++|+..+.||+|+||.||+|+.. |+.||+|++. ......+.+|.+++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~-----~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS-----SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEC-----GGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeC-----chhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 344567999999999999999999985 8999999983 2234567788888877 78999999999998776
Q ss_pred --eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEeCCCCCCEEeCCCC
Q 039922 754 --FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLH--------NDCVPAIVHRDVKSHNILLDAEM 823 (973)
Q Consensus 754 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~ivH~Dlkp~NIll~~~~ 823 (973)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||++++++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred cceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 789999999999999999753 4899999999999999999999 77 999999999999999999
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCccccccccCCC------CCCCCChhhHHHHHHHHHcC----------C
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKK------VTEKSDVYSFGVVLMELVTG----------K 887 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~~l~elltg----------~ 887 (973)
.+||+|||++..................||+.|+|||++.+.. ++.++|||||||++|||++| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876544322111234457999999999987652 33689999999999999999 7
Q ss_pred CCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHh
Q 039922 888 RPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLR 967 (973)
Q Consensus 888 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 967 (973)
.||............+....... ...+.+.......+....+.+++.+|++.||++|||+.||+++|+
T Consensus 265 ~p~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 265 LPYYDLVPSDPSVEEMRKVVCEQ------------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTS------------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cCccccCcCcccHHHHHHHHHHH------------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 78866433333333333322211 011111111122456778999999999999999999999999998
Q ss_pred hcc
Q 039922 968 VDK 970 (973)
Q Consensus 968 ~~~ 970 (973)
.+.
T Consensus 333 ~i~ 335 (342)
T 1b6c_B 333 QLS 335 (342)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 132
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-38 Score=354.51 Aligned_cols=265 Identities=22% Similarity=0.254 Sum_probs=204.1
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC---CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT---HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD 753 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 753 (973)
.++.++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 345678999999999999999999875 78899999985331 12345567899999999999999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhccCC-------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 039922 754 FNILVYEYMPNGSLADMLHEKGR-------------------------------------SGSLDWSIRFSIAQGAAKGL 796 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~~L 796 (973)
..++||||+++|+|.+++..... ...+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999852110 11235677889999999999
Q ss_pred HHHhhcCCCCeEEeCCCCCCEEeCCCC--ceEEeccCcchhccccCCCccccccccccccCccccccccC--CCCCCCCC
Q 039922 797 AYLHNDCVPAIVHRDVKSHNILLDAEM--VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT--KKVTEKSD 872 (973)
Q Consensus 797 ~yLH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 872 (973)
+|||+. +|+||||||+||+++.++ .+||+|||+++.+...............||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 89999999998765433322223445679999999999875 67899999
Q ss_pred hhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCC
Q 039922 873 VYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDF 952 (973)
Q Consensus 873 v~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~d 952 (973)
||||||++|||++|+.||... ...+....+.......+. +. .......+.+++.+|+++|
T Consensus 259 iwslG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~~------------~~------~~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGV--NDADTISQVLNKKLCFEN------------PN------YNVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCTTS------------GG------GGGSCHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHCCCCCCCC--ChHHHHHHHHhcccccCC------------cc------cccCCHHHHHHHHHHcCCC
Confidence 999999999999999999753 222333322222211000 00 0112356889999999999
Q ss_pred CCCCCCHHHHHHH
Q 039922 953 PINRPSMRRVVEL 965 (973)
Q Consensus 953 P~~Rps~~evl~~ 965 (973)
|++||++.|++++
T Consensus 319 p~~Rps~~~~l~h 331 (345)
T 3hko_A 319 VDERFDAMRALQH 331 (345)
T ss_dssp TTTSCCHHHHHHS
T ss_pred hhHCCCHHHHhcC
Confidence 9999999999886
No 133
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-38 Score=340.57 Aligned_cols=256 Identities=29% Similarity=0.451 Sum_probs=195.0
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCC--chhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHK--PETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|++. |+.||||++...... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457888999999999999999986 899999998544322 23346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC--------CCceEEecc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA--------EMVPRVADF 830 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~Df 830 (973)
|||+++++|.+++... .+++..++.++.|++.|++|||++...+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 9999999999998642 5899999999999999999999992112999999999999986 778999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhcc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLS 910 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 910 (973)
|.++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+......
T Consensus 161 g~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~ 232 (271)
T 3dtc_A 161 GLAREWHRTT------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--DGLAVAYGVAMNKLA 232 (271)
T ss_dssp CC-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHTSCCC
T ss_pred Cccccccccc------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHhhhcCCCC
Confidence 9998654332 12356899999999999999999999999999999999999999753 222222111111100
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
. .. .......+.+++.+|++.||++|||+.|++++|+.+
T Consensus 233 ~---------------~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 L---------------PI-----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C---------------CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C---------------CC-----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0 00 011235688999999999999999999999999863
No 134
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.4e-38 Score=348.10 Aligned_cols=260 Identities=25% Similarity=0.386 Sum_probs=210.3
Q ss_pred cCCCCccccccccCCeeEEEEEEC--------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEec
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK--------SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSG 751 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 751 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 357888999999999999999863 56789999995432 344556788999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEE
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGR-------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNIL 818 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 818 (973)
.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999976532 12478999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCc
Q 039922 819 LDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGEN 897 (973)
Q Consensus 819 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~ 897 (973)
++.++.+||+|||+++........ .......+++.|+|||++.+..++.++||||||+++|||++ |+.||... ..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~ 265 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PV 265 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSE--ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CH
T ss_pred EcCCCCEEEccccccccccccccc--cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CH
Confidence 999999999999999866443221 11233456788999999998899999999999999999999 99998653 33
Q ss_pred hhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 898 KDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.++...+........+ ......+.+++.+|++.||++||++.|++++|+.+
T Consensus 266 ~~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 266 EELFKLLKEGHRMDKP---------------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHHHHHTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCC---------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3444444333211000 11235688999999999999999999999999874
No 135
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=355.82 Aligned_cols=258 Identities=28% Similarity=0.360 Sum_probs=193.9
Q ss_pred CCccccccccCCeeEEEEEEC--CC--CEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec-CCeeEEE
Q 039922 684 LTEQNLIGSGGSCRVYKVKLK--SG--ETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG-QDFNILV 758 (973)
Q Consensus 684 ~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv 758 (973)
|...+.||+|+||.||+|+.. ++ ..||+|.+... ......+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 566789999999999999864 22 36899988543 334556789999999999999999999998754 5678999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.++++.... .+++..++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 170 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999999976433 578999999999999999999999 999999999999999999999999999987654
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.............+|+.|+|||++.+..++.++|||||||++|||++ |..||... ...+....+........
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~--~~~~~~~~~~~~~~~~~----- 317 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGRRLLQ----- 317 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CSSCHHHHHHTTCCCCC-----
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC--CHHHHHHHHHcCCCCCC-----
Confidence 33222222334567789999999999999999999999999999999 55566542 22333333333221100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
+ ......+.+++.+|++.||++||++.|++++|+.+.
T Consensus 318 --------p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 318 --------P--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp --------C--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------C--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 112356889999999999999999999999998753
No 136
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=9.5e-38 Score=346.12 Aligned_cols=262 Identities=17% Similarity=0.210 Sum_probs=210.0
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
+.++|+..+.||+|+||.||+|+.. +|+.||||++..... .+.+.+|+++++++ +|+||+++++++..++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 3467899999999999999999974 789999999854422 23478899999999 89999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc-----eEEeccCc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV-----PRVADFGL 832 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGl 832 (973)
||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 899999998642 3689999999999999999999999 9999999999999999887 99999999
Q ss_pred chhccccCCCcc---ccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC-chhHHHHHHHHh
Q 039922 833 AKALQSQEGQSD---DAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE-NKDIVRWVTEAT 908 (973)
Q Consensus 833 ~~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~ 908 (973)
++.+........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+....+....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 236 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK 236 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence 987654332111 1124567999999999999999999999999999999999999999864322 222233333222
Q ss_pred ccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 909 LSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 909 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
...+.. ... ...+ ++.+++..|++.||.+||++++|.+.|+..
T Consensus 237 ~~~~~~--------~~~---------~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 237 RATPIE--------VLC---------ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHSCHH--------HHT---------TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred ccCCHH--------HHh---------ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 221100 000 0012 789999999999999999999999999763
No 137
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.2e-38 Score=350.15 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=206.0
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|..++..+ +||+|+++++++...+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 567899999999999999999987 578999999854321 123345678899999988 79999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 999999999999998654 489999999999999999999999 99999999999999999999999999997543
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..++.+.+.......+
T Consensus 173 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~p----- 241 (353)
T 2i0e_A 173 WDG----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEHNVAYP----- 241 (353)
T ss_dssp CTT----CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC-----
T ss_pred cCC----cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCCCCC-----
Confidence 221 1234467999999999999999999999999999999999999999753 33344444433221100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPS-----MRRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 965 (973)
......+.+++.+|++.||++||+ +.|++++
T Consensus 242 -----------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 -----------------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -----------------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -----------------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 112356889999999999999995 5777765
No 138
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.5e-38 Score=348.74 Aligned_cols=256 Identities=26% Similarity=0.350 Sum_probs=202.9
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCE----EEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGET----VAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
++|+..+.||+|+||.||+|++. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 46888999999999999999875 4443 7888774332 2223345678999999999999999999986 45688
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 9999999999999997642 2588999999999999999999999 9999999999999999999999999999887
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
...... .......|+..|+|||++.++.++.++||||||+++|||++ |+.||... ........+........+..
T Consensus 166 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~ 241 (325)
T 3kex_A 166 PPDDKQ--LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL--RLAEVPDLLEKGERLAQPQI 241 (325)
T ss_dssp CCCTTC--CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--CTTHHHHHHHTTCBCCCCTT
T ss_pred Cccccc--ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc--CHHHHHHHHHcCCCCCCCCc
Confidence 544322 22344567889999999999999999999999999999999 99999753 23344444443322211111
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
....+.+++.+|++.||++||++.|++++|+..
T Consensus 242 ---------------------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 242 ---------------------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274 (325)
T ss_dssp ---------------------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred ---------------------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 112356899999999999999999999999874
No 139
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.9e-38 Score=339.39 Aligned_cols=253 Identities=23% Similarity=0.296 Sum_probs=206.5
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
++.++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 45667899999999999999999987 57799999985433 2345678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe---CCCCceEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL---DAEMVPRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl~~ 834 (973)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999999887653 489999999999999999999999 99999999999999 788999999999997
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
...... ......||+.|+|||++.+ .++.++||||+|+++|||++|+.||... ...+....+.......+..
T Consensus 158 ~~~~~~-----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~ 229 (277)
T 3f3z_A 158 RFKPGK-----MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP--TDSEVMLKIREGTFTFPEK 229 (277)
T ss_dssp ECCTTS-----CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHH
T ss_pred eccCcc-----chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCch
Confidence 664332 2334578999999998865 4899999999999999999999999753 2333333333322111100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. ......+.+++.+|+++||++|||+.|++++
T Consensus 230 ~~------------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 230 DW------------------LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HH------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hh------------------hcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0123578899999999999999999999864
No 140
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-38 Score=355.99 Aligned_cols=271 Identities=15% Similarity=0.193 Sum_probs=207.9
Q ss_pred ccCCCCccccccccCCeeEEEEEECC------CCEEEEEEecCCCCCchhH---------HHHHHHHHHHhcCCCCCeee
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLKS------GETVAVKRLLGGTHKPETE---------TVFRSEIETLGRVRHGNVVK 744 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~---------~~~~~e~~~l~~l~h~niv~ 744 (973)
..++|+..+.||+|+||.||+|++.+ ++.||||++.........+ ..+..|+..++.++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34589999999999999999998864 4789999985432111111 12334666778889999999
Q ss_pred EEeEEecC----CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC
Q 039922 745 LLMCCSGQ----DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD 820 (973)
Q Consensus 745 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 820 (973)
+++++... ...|+||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+. +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99998764 4579999999 999999997643 3589999999999999999999999 999999999999999
Q ss_pred --CCCceEEeccCcchhccccCCCc---cccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC
Q 039922 821 --AEMVPRVADFGLAKALQSQEGQS---DDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG 895 (973)
Q Consensus 821 --~~~~~kl~DfGl~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~ 895 (973)
.++.+||+|||+++.+....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 88999999999998765432211 1122445699999999999999999999999999999999999999985332
Q ss_pred CchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 896 ENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+....... .+.+++++.+.... .+..+.+++..|++.+|++||++.+|++.|+..
T Consensus 267 -~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 267 -DPKYVRDSKIRYRE--------NIASLMDKCFPAAN----APGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp -CHHHHHHHHHHHHH--------CHHHHHHHHSCTTC----CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHhhh--------hHHHHHHHhccccc----CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 23333333322211 22333443332111 235788999999999999999999999999763
No 141
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.9e-38 Score=345.25 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=212.8
Q ss_pred cCCCCccccccccCCeeEEEEEE------CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL------KSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQD 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 753 (973)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++..++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 45788999999999999999985 256789999996432 334557789999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhccCCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEE
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRS---------------GSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNIL 818 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~---------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 818 (973)
..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 999999999999999999765321 2488999999999999999999999 9999999999999
Q ss_pred eCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCc
Q 039922 819 LDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGEN 897 (973)
Q Consensus 819 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~ 897 (973)
+++++.+||+|||+++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |..||.... ..
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-~~ 254 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-VD 254 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTS--EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-SS
T ss_pred EcCCCCEEEccccccccccccccc--eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc-ch
Confidence 999999999999999876544321 12233457789999999999999999999999999999999 999987542 22
Q ss_pred hhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 898 KDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+........+ ......+.+++.+|++.||++|||+.|++++|++..
T Consensus 255 ~~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 255 SKFYKMIKEGFRMLSP---------------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHHHHHHTCCCCCC---------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHhccCCCCCCc---------------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 3333333322111000 112356889999999999999999999999998753
No 142
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.4e-38 Score=348.44 Aligned_cols=274 Identities=19% Similarity=0.236 Sum_probs=198.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
....++|+..+.||+|+||+||+|+.. +++.||+|++..........+.+.+|+.++++++||||+++++++..++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 455678999999999999999999876 7899999999655544445567789999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe-----CCCCceEEeccC
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL-----DAEMVPRVADFG 831 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DfG 831 (973)
+||||++ |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 110 lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999997 69999997654 489999999999999999999999 99999999999999 455669999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhcc
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLS 910 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 910 (973)
+++...... .......||..|+|||++.+. .++.++||||+||++|||++|+.||... ...+....+......
T Consensus 183 ~a~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~~~~~~~~ 256 (329)
T 3gbz_A 183 LARAFGIPI----RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD--SEIDQLFKIFEVLGL 256 (329)
T ss_dssp HHHHHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCC
T ss_pred CccccCCcc----cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC--CHHHHHHHHHHHhCC
Confidence 998764332 123345689999999998874 4899999999999999999999999753 222222222222211
Q ss_pred CCCccccCccccc---ccCCCCCCCCCHH------HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 911 SPERGCCRDLNQL---IDPRMDLSTCDYE------EAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~---~d~~l~~~~~~~~------~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...... ...... .+........... ....+.+++.+|+++||++|||+.|++++
T Consensus 257 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 257 PDDTTW-PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp CCTTTS-TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred Cchhhh-hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 111111 111110 0000000011111 23578899999999999999999999875
No 143
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.8e-38 Score=340.92 Aligned_cols=257 Identities=26% Similarity=0.365 Sum_probs=212.5
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
..++|+..+.||+|+||.||+|.++ +++.||+|++... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3457888999999999999999987 5889999999532 33456789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999976432 3589999999999999999999999 999999999999999999999999999987653
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .......+++.|+|||++.+..++.++||||+|+++|||++ |..||... +.....+.+........+
T Consensus 164 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~--~~~~~~~~~~~~~~~~~~---- 234 (288)
T 3kfa_A 164 DTY---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP---- 234 (288)
T ss_dssp SSS---EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTCCCCCC----
T ss_pred Ccc---ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhccCCCCCC----
Confidence 322 22334557789999999998999999999999999999999 88888653 333344433332111000
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++|||+.|+++.|+..
T Consensus 235 -----------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 235 -----------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 11235688999999999999999999999999863
No 144
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.1e-38 Score=344.06 Aligned_cols=264 Identities=21% Similarity=0.297 Sum_probs=201.6
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|+.++++++||||+++++++..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3467899999999999999999975 79999999996432 334556778999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 758 VYEYMPNGSLADMLHEKG-RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999986532 223588999999999999999999999 9999999999999999999999999998866
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..... ......|+..|+|||++.+..++.++||||||+++|||++|+.||.............+......
T Consensus 187 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 256 (310)
T 2wqm_A 187 SSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP------ 256 (310)
T ss_dssp ----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC------
T ss_pred cCCCc----cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC------
Confidence 43321 12335689999999999999999999999999999999999999975432222333222221111
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
. ... ......+.+++.+|++.||++||++.||+++|++.+
T Consensus 257 -----~-----~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 257 -----P-----LPS----DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp -----C-----CCT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----C-----Ccc----cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0 000 112356889999999999999999999999998854
No 145
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.4e-38 Score=341.84 Aligned_cols=261 Identities=28% Similarity=0.331 Sum_probs=204.3
Q ss_pred CCCCccccccccCCeeEEEEEECC----CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe-cCCeeE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKS----GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS-GQDFNI 756 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~ 756 (973)
.+|+..++||+|+||.||+|+..+ +..||+|.+... ......+.+.+|+.++++++||||+++++++. .++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 357788999999999999998652 235899988532 33445577899999999999999999999864 566789
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 104 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 9999999999999997643 3578999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
...............+|+.|+|||.+.+..++.++||||+|+++|||++|+.|+.... ...+....+........+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 254 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQP--- 254 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-CTTTHHHHHHTTCCCCCC---
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-CHHHHHHHHhcCCCCCCC---
Confidence 5443222233344567889999999999999999999999999999999655544332 222333333222211110
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+.+++.+|++.||++||++.|+++.|++..
T Consensus 255 ------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 255 ------------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp ------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011346889999999999999999999999998854
No 146
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-37 Score=339.92 Aligned_cols=264 Identities=19% Similarity=0.214 Sum_probs=211.8
Q ss_pred cccCCCCccccccccCCeeEEEEEE-CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKL-KSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 756 (973)
.+.++|+..+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+..++++ +|++++++++++..+...+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 3456799999999999999999997 4789999999854322 23477899999999 7999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc-----eEEeccC
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV-----PRVADFG 831 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfG 831 (973)
+||||+ +++|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 9999999986532 589999999999999999999999 9999999999999988776 9999999
Q ss_pred cchhccccCCCcc---ccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC-chhHHHHHHHH
Q 039922 832 LAKALQSQEGQSD---DAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE-NKDIVRWVTEA 907 (973)
Q Consensus 832 l~~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~-~~~~~~~~~~~ 907 (973)
+++.......... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .......+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 9987654432111 1234567999999999999999999999999999999999999999764322 22233333322
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
....+.. +.. ......+.+++.+|++.||++||++++|++.|++.
T Consensus 237 ~~~~~~~-------~~~----------~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 237 KQSTPLR-------ELC----------AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHSCHH-------HHT----------TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred ccCccHH-------HHH----------hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 2221100 000 01235788999999999999999999999999874
No 147
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=345.36 Aligned_cols=262 Identities=29% Similarity=0.443 Sum_probs=204.2
Q ss_pred ccccCCCCccccccccCCeeEEEEEECC-----CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKS-----GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 752 (973)
+...++|+..+.||+|+||.||+|+... +..||+|++.... .......+.+|+.++++++||||+++++++...
T Consensus 40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 118 (333)
T 1mqb_A 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118 (333)
T ss_dssp BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence 3345678888999999999999998752 2359999995432 344556789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCc
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGL 832 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 832 (973)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 193 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGL 193 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCc
Confidence 99999999999999999997643 3589999999999999999999999 999999999999999999999999999
Q ss_pred chhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
++......... .......+|..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+.......
T Consensus 194 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~~ 270 (333)
T 1mqb_A 194 SRVLEDDPEAT-YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFRLP 270 (333)
T ss_dssp ------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC
T ss_pred chhhccccccc-cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCcCC
Confidence 98765432211 11223346788999999999999999999999999999999 99999653 2333333332221110
Q ss_pred CCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 912 PERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 912 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
. .......+.+++.+|++.||++||++.|++++|+..
T Consensus 271 ~---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 271 T---------------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp C---------------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred C---------------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 011235688999999999999999999999999874
No 148
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.5e-38 Score=361.13 Aligned_cols=271 Identities=22% Similarity=0.223 Sum_probs=201.9
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC-----
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ----- 752 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 752 (973)
.+.++|+..+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 45678999999999999999999876 689999999976555556677889999999999999999999999654
Q ss_pred -CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 753 -DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 753 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
...|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 456999999964 56666643 378999999999999999999999 99999999999999999999999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+....+.......
T Consensus 210 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~--~~~~~~~~i~~~lg~p 282 (464)
T 3ttj_A 210 LARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR--DYIDQWNKVIEQLGTP 282 (464)
T ss_dssp CC-----CC-----CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCSC
T ss_pred eeeecCCCc-----ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHhcCCC
Confidence 998764322 234468999999999999999999999999999999999999999753 2222222222211110
Q ss_pred CCcc------------------ccCcccccccCCC-CC-CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 912 PERG------------------CCRDLNQLIDPRM-DL-STCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 912 ~~~~------------------~~~~l~~~~d~~l-~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+.. ......+.+...+ .. ..........+.+++.+|+++||++|||+.|+++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000001110000 00 00011225678999999999999999999999986
No 149
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3e-38 Score=364.72 Aligned_cols=256 Identities=30% Similarity=0.399 Sum_probs=204.0
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|+..+.||+|+||.||+|+++++..||||++.... ...+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 34678889999999999999999988889999995433 234678999999999999999999999876 67899999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 999999999997532 12488999999999999999999999 99999999999999999999999999998764332
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. .......++..|+|||++.++.++.++||||||+++|||++ |+.||... ...+..+.+........+
T Consensus 335 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~~~~------ 403 (452)
T 1fmk_A 335 Y---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRMPCP------ 403 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCC------
T ss_pred e---ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC------
Confidence 1 11223456789999999999999999999999999999999 89998653 233344433322111000
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+.+++.+|++.||++|||+.+|++.|+...
T Consensus 404 ---------------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 404 ---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 112356889999999999999999999999998854
No 150
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.2e-38 Score=351.80 Aligned_cols=254 Identities=23% Similarity=0.273 Sum_probs=195.6
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
..++|+..+.||+|+||+||+++.+ +++.||+|++..... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 3567999999999999999999987 799999999964332 235578999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc--eEEeccCcchhc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV--PRVADFGLAKAL 836 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGl~~~~ 836 (973)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999997654 489999999999999999999999 9999999999999987765 999999998743
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCC-CChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEK-SDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.... ......||+.|+|||++.+..++.+ +||||+||++|||++|+.||..... .......+.........
T Consensus 169 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~~~~~~~~~~-- 240 (361)
T 3uc3_A 169 VLHS-----QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-PRDYRKTIQRILSVKYS-- 240 (361)
T ss_dssp -----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----CCCHHHHHHHHHTTCCC--
T ss_pred cccC-----CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhcCCCC--
Confidence 3221 2234579999999999988887655 8999999999999999999976422 22222222222111000
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+.+ . ......+.+++.+|+++||++|||+.|++++
T Consensus 241 -------~~~-~-------~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 -------IPD-D-------IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -------CCT-T-------SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -------CCC-c-------CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000 0 0113567899999999999999999999886
No 151
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.6e-38 Score=355.86 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=199.8
Q ss_pred CCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC--CCCeeeEEeEEecCCeeEEEE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVR--HGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 759 (973)
..|+..+.||+|+||.||+|...+++.||||++..........+.+.+|+.++++++ |+||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 358899999999999999999988999999999766555566778999999999997 599999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+...
T Consensus 136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 9 55889999998653 578889999999999999999999 999999999999995 588999999999876433
Q ss_pred CCCccccccccccccCccccccccC-----------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYT-----------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+ ....
T Consensus 208 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~----~~~~ 281 (390)
T 2zmd_A 208 TTS--VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----HAII 281 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH----HHHH
T ss_pred Ccc--ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH----HHHh
Confidence 221 11234579999999999865 468889999999999999999999997532211111 1111
Q ss_pred ccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 909 LSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 909 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
..... ..... .....+.+++.+|++.||++||++.|++++-
T Consensus 282 ~~~~~--------------~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 282 DPNHE--------------IEFPD---IPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CTTSC--------------CCCCC---CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred Ccccc--------------CCCCc---cchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 11000 00000 0135678999999999999999999998763
No 152
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=357.42 Aligned_cols=276 Identities=22% Similarity=0.301 Sum_probs=214.7
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC--eeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD--FNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 757 (973)
.++|+..++||+|+||.||+|++. +|+.||||++.... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 457889999999999999999987 58999999995332 2233566789999999999999999999998755 6799
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe----CCCCceEEeccCcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL----DAEMVPRVADFGLA 833 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGl~ 833 (973)
||||+++|+|.+++........+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999998755444589999999999999999999999 99999999999999 78888999999999
Q ss_pred hhccccCCCccccccccccccCccccccccC--------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC--chhHHHH
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYT--------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE--NKDIVRW 903 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--~~~~~~~ 903 (973)
+...... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+....
T Consensus 164 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~ 238 (396)
T 4eut_A 164 RELEDDE-----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238 (396)
T ss_dssp EECCCGG-----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHH
T ss_pred eEccCCC-----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHH
Confidence 8764332 2234579999999999865 56788999999999999999999999753222 2222222
Q ss_pred HHHHhccCCCccccCccccccc-------CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 904 VTEATLSSPERGCCRDLNQLID-------PRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d-------~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
+.... ++ ..........+ ...............+.+++.+|++.||++||+++|+++.++.+
T Consensus 239 ~~~~~---p~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 239 IITGK---PS-GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HHHSC---CT-TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HhcCC---Cc-ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 22221 11 11111111111 11111234467788899999999999999999999999998774
No 153
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.6e-38 Score=362.38 Aligned_cols=259 Identities=21% Similarity=0.208 Sum_probs=206.3
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
...++|+..++||+|+||+||+|+.+ +++.||+|++.+... .....+.+.+|..++..++||||++++++|.+++..|
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence 34568999999999999999999987 578999999853211 1112233788999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 151 lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp EEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 9999999999999997632 3589999999999999999999999 9999999999999999999999999999765
Q ss_pred cccCCCccccccccccccCcccccccc-----CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhcc-
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAY-----TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLS- 910 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~- 910 (973)
..... .......||+.|+|||++. .+.++.++||||+||++|||++|+.||... +..+....+......
T Consensus 226 ~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~ 300 (437)
T 4aw2_A 226 MEDGT---VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERF 300 (437)
T ss_dssp CTTSC---EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC
T ss_pred ccCCC---cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--ChhHHHHhhhhccccc
Confidence 43322 1223467999999999987 567899999999999999999999999753 333333333222111
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPIN--RPSMRRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~evl~~ 965 (973)
..+.. .......+.+++.+|++.+|++ ||++.|+++|
T Consensus 301 ~~p~~------------------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 301 QFPTQ------------------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CCCSS------------------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cCCcc------------------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11100 0012356788999999998888 9999999876
No 154
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.6e-38 Score=340.84 Aligned_cols=258 Identities=23% Similarity=0.343 Sum_probs=210.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe--cCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS--GQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 757 (973)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++..........+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457889999999999999999986 7899999999766555666778999999999999999999999874 4678899
Q ss_pred EEeccCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----eEEeCCCCCCEEeCCCCceEEeccC
Q 039922 758 VYEYMPNGSLADMLHEKGR-SGSLDWSIRFSIAQGAAKGLAYLHNDCVPA-----IVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
||||+++++|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||++++++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999975432 23489999999999999999999999 7 9999999999999999999999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.++...... .......|+..|+|||++.+..++.++||||||+++|||++|+.||... ...++...+.......
T Consensus 162 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~~ 235 (279)
T 2w5a_A 162 LARILNHDT----SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFRR 235 (279)
T ss_dssp HHHHC---C----HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCC
T ss_pred hheeecccc----ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhccccc
Confidence 998764322 1123356899999999999989999999999999999999999999753 3334444443332210
Q ss_pred CCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhh
Q 039922 912 PERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRV 968 (973)
Q Consensus 912 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 968 (973)
. . ......+.+++.+|++.||++||++.||++++..
T Consensus 236 ~----------------~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 236 I----------------P-----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp C----------------C-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred C----------------C-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 0 0 1123568899999999999999999999998765
No 155
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=340.15 Aligned_cols=258 Identities=25% Similarity=0.298 Sum_probs=207.1
Q ss_pred CCccccccccCCeeEEEEEECC-C---CEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee-EEE
Q 039922 684 LTEQNLIGSGGSCRVYKVKLKS-G---ETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN-ILV 758 (973)
Q Consensus 684 ~~~~~~ig~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv 758 (973)
|...++||+|+||.||+|+..+ + ..||+|++... ......+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 5566899999999999998642 2 37999998532 3344567789999999999999999999999876655 999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 102 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp ECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 99999999999997643 3588999999999999999999999 999999999999999999999999999986654
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.............++..|+|||...+..++.++||||+|+++|||++|+.|+.... +..+....+........+
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 250 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRLPQP----- 250 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCCCCC-----
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCCCCC-----
Confidence 33222233344578899999999999999999999999999999999777765432 334444444333211110
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++|||+.|+++.|++.
T Consensus 251 ----------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 251 ----------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp ----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11235688999999999999999999999999875
No 156
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=338.75 Aligned_cols=256 Identities=23% Similarity=0.338 Sum_probs=207.2
Q ss_pred CCCccc-cccccCCeeEEEEEEC---CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 683 HLTEQN-LIGSGGSCRVYKVKLK---SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 683 ~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
+|...+ .||+|+||.||+|.+. +++.||+|++... ......+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 455555 8999999999999864 6788999999643 2345567789999999999999999999999 45668999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999997542 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.... ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+........
T Consensus 163 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~i~~~~~~~~----- 234 (287)
T 1u59_A 163 DDSY-YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGKRMEC----- 234 (287)
T ss_dssp CSCE-ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CTHHHHHHHHTTCCCCC-----
T ss_pred Ccce-eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHhcCCcCCC-----
Confidence 3321 112233456889999999988889999999999999999999 99999753 23334444333221100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.......+.+++.+|++.||++||++.|++++|+..
T Consensus 235 ----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 235 ----------------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp ----------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 012235788999999999999999999999999874
No 157
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6e-38 Score=341.26 Aligned_cols=257 Identities=25% Similarity=0.347 Sum_probs=204.8
Q ss_pred CCCCccc-cccccCCeeEEEEEEC---CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 682 PHLTEQN-LIGSGGSCRVYKVKLK---SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 682 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
++|...+ .||+|+||.||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4577777 9999999999999653 468899999965554555567899999999999999999999999 5667889
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999998643 488999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+........
T Consensus 169 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~---- 241 (291)
T 1xbb_A 169 ADENY-YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERMGC---- 241 (291)
T ss_dssp TTCSE-EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCC----
T ss_pred cCCCc-ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCCC----
Confidence 43321 111223446788999999988889999999999999999999 99999753 23333333332211100
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.......+.+++.+|++.||++||++.||++.|+..
T Consensus 242 -----------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 242 -----------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp -----------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 012235788999999999999999999999999874
No 158
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8e-38 Score=351.40 Aligned_cols=277 Identities=20% Similarity=0.206 Sum_probs=211.7
Q ss_pred eecccc-ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-----CCCeee
Q 039922 672 RVSFNE-DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-----HGNVVK 744 (973)
Q Consensus 672 ~~~~~~-~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~ 744 (973)
.+++.+ ..+.++|+..++||+|+||.||+|+.. +++.||||++.. .......+..|+.+++.++ ||||++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 455555 456788999999999999999999985 789999999942 2344566788999999986 999999
Q ss_pred EEeEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---
Q 039922 745 LLMCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA--- 821 (973)
Q Consensus 745 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~--- 821 (973)
+++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 999999999999999999 8999999986542 3588999999999999999999999 9999999999999975
Q ss_pred ----------------------CCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHH
Q 039922 822 ----------------------EMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVV 879 (973)
Q Consensus 822 ----------------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~ 879 (973)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC-------CcCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 789999999999764322 223578999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc----Cccccccc-----CCCCCCCCCHH--------------
Q 039922 880 LMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC----RDLNQLID-----PRMDLSTCDYE-------------- 936 (973)
Q Consensus 880 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~d-----~~l~~~~~~~~-------------- 936 (973)
+|||++|+.||... ...+....+.......+..... ......++ ..+........
T Consensus 249 l~ell~g~~pf~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 326 (360)
T 3llt_A 249 LAELYTGSLLFRTH--EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326 (360)
T ss_dssp HHHHHHSSCSCCCS--SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCC--cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccccccc
Confidence 99999999999753 3333333333322221110000 00000000 00000001111
Q ss_pred -HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 937 -EAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 937 -~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
....+.+++.+|++.||++|||+.|++++
T Consensus 327 ~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 327 IKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred chHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 12567899999999999999999999875
No 159
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9e-38 Score=359.93 Aligned_cols=251 Identities=28% Similarity=0.400 Sum_probs=207.1
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|...+.||+|+||.||+|+.. +|+.||||++.+... .....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 4567999999999999999999986 799999999853221 11234578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 94 VMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 999999999999997543 589999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||... ........+.......
T Consensus 168 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~----- 235 (476)
T 2y94_A 168 DGE-----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD--HVPTLFKKICDGIFYT----- 235 (476)
T ss_dssp TTC-----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS--SSHHHHHHHHTTCCCC-----
T ss_pred ccc-----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC--CHHHHHHHHhcCCcCC-----
Confidence 322 1234579999999999988765 67999999999999999999999753 3333333333221110
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+ ......+.+++.+|++.||++|||+.|++++
T Consensus 236 ---------p--------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 236 ---------P--------QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---------C--------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---------C--------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0 0112467899999999999999999999875
No 160
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-38 Score=360.90 Aligned_cols=257 Identities=22% Similarity=0.283 Sum_probs=205.6
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..++||+|+||+||+|+.+ +++.||+|++.+... .....+.+.+|+.+++.++|||||++++++.+++..|+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 3567999999999999999999987 688999999853211 11122347789999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+|||+++...
T Consensus 147 V~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp EECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 99999999999998753 478999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCCCccccccccccccCccccccccCCC----CCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKK----VTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||... +.......+.........
T Consensus 220 ~~~~---~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~ 294 (410)
T 3v8s_A 220 KEGM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLTF 294 (410)
T ss_dssp TTSE---EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCCC
T ss_pred cCCc---ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--ChhhHHHHHHhccccccC
Confidence 3221 1223467999999999998665 789999999999999999999999753 333333333322211000
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPIN--RPSMRRVVELL 966 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~evl~~L 966 (973)
. + .......+.+++.+|++.+|.+ ||++.||++|-
T Consensus 295 p----------~--------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 295 P----------D--------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp C----------T--------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred C----------C--------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 0 0 0012356789999999999988 99999999863
No 161
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-38 Score=348.87 Aligned_cols=261 Identities=25% Similarity=0.354 Sum_probs=197.9
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe-
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF- 754 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 754 (973)
..+.++|+..+.||+|+||.||+|+.. +++.||+|++..... .......+.+|+.++++++||||+++++++...+.
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 456778999999999999999999974 789999999965433 33445678999999999999999999999876543
Q ss_pred ---eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 755 ---NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 755 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
.|+||||+++|+|.++++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred CcccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 399999999999999997654 589999999999999999999999 99999999999999999999999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
+++.+...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||... ...............
T Consensus 162 ~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--~~~~~~~~~~~~~~~- 237 (311)
T 3ork_A 162 IARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--SPVSVAYQHVREDPI- 237 (311)
T ss_dssp CC-------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCCC-
T ss_pred Ccccccccccc-cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCCC-
Confidence 99876543221 11223456899999999999999999999999999999999999999753 222221111111100
Q ss_pred CCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 912 PERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 912 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
++. .. .......+.+++.+|++.||++||++.+++++
T Consensus 238 ~~~--------~~---------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 238 PPS--------AR---------HEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CHH--------HH---------STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred Ccc--------cc---------cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 000 00 01123568899999999999999977666543
No 162
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-37 Score=336.37 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=203.7
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..+.||+|+||.||+|+.. +++.||+|++..... .......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567889999999999999999876 677999999843221 12234668899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999997653 489999999999999999999999 99999999999999999999999999986543
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .....|+..|+|||++.+..++.++||||+|+++|||++|..||... ........+.......+
T Consensus 161 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~----- 227 (279)
T 3fdn_A 161 SSR------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEFTFP----- 227 (279)
T ss_dssp -------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCC-----
T ss_pred ccc------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHHHHhCCCCCC-----
Confidence 221 23357899999999999999999999999999999999999999752 22333333322211100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
......+.+++.+|++.||++|||+.|++++-
T Consensus 228 -----------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 228 -----------------DFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp -----------------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred -----------------CcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 11235678999999999999999999999864
No 163
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.7e-38 Score=347.53 Aligned_cols=262 Identities=23% Similarity=0.383 Sum_probs=210.8
Q ss_pred ccCCCCccccccccCCeeEEEEEECC------CCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecC
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLKS------GETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQ 752 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 752 (973)
..++|+..+.||+|+||.||+|.... ++.||+|++.... .....+.+.+|+.+++++ +||||+++++++..+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 34678899999999999999998752 2479999995433 334567789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGR-----------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA 821 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 821 (973)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++++
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 999999999999999999875321 23578999999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhH
Q 039922 822 EMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDI 900 (973)
Q Consensus 822 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~ 900 (973)
++.+||+|||+++........ .......+|..|+|||++.+..++.++||||||+++|||++ |..||.... .....
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~~ 276 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-VNSKF 276 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTS--EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-SSHHH
T ss_pred CCeEEECccccccccccccce--eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc-hhHHH
Confidence 999999999999876543321 12233557889999999999999999999999999999999 888987532 22333
Q ss_pred HHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 901 VRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
...+........+ ......+.+++.+|++.||++|||+.||+++|+..
T Consensus 277 ~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 277 YKLVKDGYQMAQP---------------------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHHHTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCC---------------------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 3333332211000 01135688999999999999999999999999874
No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=350.13 Aligned_cols=248 Identities=24% Similarity=0.321 Sum_probs=204.3
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc------hhHHHHHHHHHHHhcCCCCCeeeEEeEEe
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP------ETETVFRSEIETLGRVRHGNVVKLLMCCS 750 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 750 (973)
.++.++|+..+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|+.++++++||||+++++++.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 456678999999999999999999875 78899999996543221 13345678999999999999999999999
Q ss_pred cCCeeEEEEeccCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEec
Q 039922 751 GQDFNILVYEYMPNG-SLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVAD 829 (973)
Q Consensus 751 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 829 (973)
..+..++||||+..| +|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEee
Confidence 999999999999777 9999987643 489999999999999999999999 999999999999999999999999
Q ss_pred cCcchhccccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 830 FGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 830 fGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
||+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ..
T Consensus 174 fg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~-------- 236 (335)
T 3dls_A 174 FGSAAYLERGKL-----FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE----ET-------- 236 (335)
T ss_dssp CTTCEECCTTCC-----BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG----GG--------
T ss_pred cccceECCCCCc-----eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH----HH--------
Confidence 999987643322 234578999999999988776 789999999999999999999996411 00
Q ss_pred ccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 909 LSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 909 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
......+. ......+.+++.+|+++||++|||+.|++++-
T Consensus 237 -----------~~~~~~~~-------~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 237 -----------VEAAIHPP-------YLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp -----------TTTCCCCS-------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred -----------HhhccCCC-------cccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 00000000 01235688999999999999999999999873
No 165
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-38 Score=358.53 Aligned_cols=277 Identities=24% Similarity=0.317 Sum_probs=198.6
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEecCC--
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSGQD-- 753 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-- 753 (973)
..+.++|+..+.||+|+||.||+|.+. +|+.||+|++..........+.+.+|+.+++++. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 345678999999999999999999875 7999999999766556666777889999999997 999999999997544
Q ss_pred eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcc
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLA 833 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~ 833 (973)
..|+||||++ |+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 6899999997 7999988763 488999999999999999999999 9999999999999999999999999999
Q ss_pred hhccccCCC-----------------ccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCC
Q 039922 834 KALQSQEGQ-----------------SDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFG 895 (973)
Q Consensus 834 ~~~~~~~~~-----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~ 895 (973)
+.+...... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-- 234 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS-- 234 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC--
Confidence 865431110 1122344679999999999876 67899999999999999999999999753
Q ss_pred CchhHHHHHHHHhccCCCccccCcc-----ccccc---C-----CCCCCCCC-------------HHHHHHHHHHHHhcc
Q 039922 896 ENKDIVRWVTEATLSSPERGCCRDL-----NQLID---P-----RMDLSTCD-------------YEEAEKVLNVALMCT 949 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~d---~-----~l~~~~~~-------------~~~~~~l~~l~~~cl 949 (973)
+..+....+.... ..+.......+ ...++ . .......- ......+.+++.+|+
T Consensus 235 ~~~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 235 STMNQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp SHHHHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 2222222222211 11110000000 00000 0 00000000 011356889999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 039922 950 SDFPINRPSMRRVVEL 965 (973)
Q Consensus 950 ~~dP~~Rps~~evl~~ 965 (973)
+.||++|||+.|+++|
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999987
No 166
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.6e-38 Score=349.09 Aligned_cols=248 Identities=22% Similarity=0.265 Sum_probs=180.5
Q ss_pred cccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEecCCeeEEEEeccCC
Q 039922 687 QNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSGQDFNILVYEYMPN 764 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 764 (973)
.+.||+|+||.||+|+.+ +|+.||||++.+ .....+.+|+.+++.++ ||||+++++++.+++..|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK-----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG-----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh-----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999986 689999999842 34566788999999997 99999999999999999999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC---ceEEeccCcchhccccCC
Q 039922 765 GSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM---VPRVADFGLAKALQSQEG 841 (973)
Q Consensus 765 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGl~~~~~~~~~ 841 (973)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 91 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 163 (325)
T 3kn6_A 91 GELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN- 163 (325)
T ss_dssp CBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-
Confidence 99999998653 589999999999999999999999 999999999999997765 89999999997654332
Q ss_pred CccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC--chhHHHHHHHHhccCCCccccCc
Q 039922 842 QSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE--NKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.+........
T Consensus 164 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~------- 233 (325)
T 3kn6_A 164 ---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF------- 233 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-------
T ss_pred ---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-------
Confidence 1233456899999999999999999999999999999999999999753221 1111222222111100
Q ss_pred ccccccCCCCCCCC-CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 920 LNQLIDPRMDLSTC-DYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 920 l~~~~d~~l~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..... .......+.+++.+|+++||++|||+.|++++
T Consensus 234 ---------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 234 ---------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp ---------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ---------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 00000 01124678899999999999999999999865
No 167
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.3e-37 Score=353.31 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=195.8
Q ss_pred ccccCCCCcc-ccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHH-hcCCCCCeeeEEeEEec---
Q 039922 678 DDILPHLTEQ-NLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETL-GRVRHGNVVKLLMCCSG--- 751 (973)
Q Consensus 678 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~--- 751 (973)
..+.++|... ++||+|+||+||+|+.+ +|+.||||++.. ...+.+|++++ +..+||||+++++++..
T Consensus 57 ~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~ 129 (400)
T 1nxk_A 57 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYA 129 (400)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred CcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence 4556667765 78999999999999986 689999999842 13466788876 44589999999998865
Q ss_pred -CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CCceEE
Q 039922 752 -QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EMVPRV 827 (973)
Q Consensus 752 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 827 (973)
.+..|+||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 130 ~~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl 205 (400)
T 1nxk_A 130 GRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKL 205 (400)
T ss_dssp TEEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEE
T ss_pred CCcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEE
Confidence 567899999999999999997643 23589999999999999999999999 9999999999999998 789999
Q ss_pred eccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCc--hhHHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGEN--KDIVRWVT 905 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~--~~~~~~~~ 905 (973)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+.
T Consensus 206 ~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~ 280 (400)
T 1nxk_A 206 TDFGFAKETTSHN-----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280 (400)
T ss_dssp CCCTTCEECC----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH
T ss_pred EecccccccCCCC-----ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH
Confidence 9999998654322 2334678999999999999999999999999999999999999997643221 12333333
Q ss_pred HHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 906 EATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 906 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
......+. +.. ......+.+++.+|++.||++|||+.|++++-
T Consensus 281 ~~~~~~~~------------~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 281 MGQYEFPN------------PEW------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp HTCCCCCT------------TTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cCcccCCC------------ccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 32221110 000 11235688999999999999999999999864
No 168
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-37 Score=342.77 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=200.2
Q ss_pred cCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe--
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF-- 754 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 754 (973)
.++|...+.||+|+||.||+|+.. +++.||+|++..........+.+.+|+.++++++||||+++++++...+.
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 456888999999999999999865 34589999996555555666789999999999999999999999987553
Q ss_pred ---eEEEEeccCCCChhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEe
Q 039922 755 ---NILVYEYMPNGSLADMLHEKG---RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVA 828 (973)
Q Consensus 755 ---~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 828 (973)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEe
Confidence 499999999999999985332 234689999999999999999999999 99999999999999999999999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHH
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 907 (973)
|||+++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||... ........+...
T Consensus 190 Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~ 265 (313)
T 3brb_A 190 DFGLSKKIYSGDYY--RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV--QNHEMYDYLLHG 265 (313)
T ss_dssp SCSCC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTT
T ss_pred ecCcceeccccccc--CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHHcC
Confidence 99999876443221 12233457789999999999999999999999999999999 88888653 233344433322
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.....+ ......+.+++.+|++.||++||++.+++++|+...
T Consensus 266 ~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 266 HRLKQP---------------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp CCCCCB---------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCC---------------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 211000 112356889999999999999999999999998753
No 169
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.6e-38 Score=344.46 Aligned_cols=261 Identities=24% Similarity=0.309 Sum_probs=199.1
Q ss_pred cccCCCCcc-ccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCee
Q 039922 679 DILPHLTEQ-NLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 679 ~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 755 (973)
.+.+.|.+. ++||+|+||.||+|+.. +++.||||++... .....+.+.+|++++.++ +||||+++++++..++..
T Consensus 9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ--PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC--SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC--cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 345567774 78999999999999865 7999999999644 234456788999999885 799999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc---eEEeccCc
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV---PRVADFGL 832 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGl 832 (973)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 99999999999999997653 488999999999999999999999 9999999999999998776 99999999
Q ss_pred chhccccCCC---ccccccccccccCccccccccC-----CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCc-------
Q 039922 833 AKALQSQEGQ---SDDAMSCVAGSYGYIAPEYAYT-----KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGEN------- 897 (973)
Q Consensus 833 ~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~------- 897 (973)
+......... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 8765432211 1112234569999999999875 568899999999999999999999997643221
Q ss_pred ------hhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 898 ------KDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 898 ------~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.+.+.......+ +... ......+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~------------~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGKYEFP------------DKDW------AHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CCHHHHHHHHHHHHHCCCCCC------------HHHH------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cchhHHHHHHHHHhccCcccC------------chhc------ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111222221111100 0000 0123568899999999999999999999986
No 170
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-37 Score=349.13 Aligned_cols=249 Identities=24% Similarity=0.245 Sum_probs=195.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC-chhHHHHHHHHHH-HhcCCCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK-PETETVFRSEIET-LGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.+.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 457889999999999999999987 6889999999654322 2333455667666 577899999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++++||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997653 478899999999999999999999 99999999999999999999999999998643
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|..||... +..+..+.+.......
T Consensus 191 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~------ 258 (373)
T 2r5t_A 191 EHN----STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNILNKPLQL------ 258 (373)
T ss_dssp CCC----CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--BHHHHHHHHHHSCCCC------
T ss_pred cCC----CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhcccCC------
Confidence 322 1234467999999999999999999999999999999999999999752 3333333333321110
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVV 963 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl 963 (973)
. ......+.+++.+|++.||++||++.+..
T Consensus 259 -------~---------~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 259 -------K---------PNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp -------C---------SSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred -------C---------CCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 0 11235678999999999999999985433
No 171
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.3e-38 Score=349.59 Aligned_cols=250 Identities=26% Similarity=0.370 Sum_probs=201.7
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC-chhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK-PETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.+.|+..+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 345888899999999999999974 7899999999654332 33446788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||++ |++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99996 788888865432 589999999999999999999999 999999999999999999999999999976532
Q ss_pred cCCCccccccccccccCcccccccc---CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAY---TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
. ....||+.|+|||++. .+.++.++|||||||++|||++|+.||... ........+......
T Consensus 207 ~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~--~~~~~~~~~~~~~~~----- 271 (348)
T 1u5q_A 207 A--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHIAQNESP----- 271 (348)
T ss_dssp B--------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC-----
T ss_pred C--------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHhcCCC-----
Confidence 2 2357899999999984 567899999999999999999999999753 111211111111100
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.... ......+.+++.+|++.||++|||+.|++++.
T Consensus 272 -----------~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 272 -----------ALQS----GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp -----------CCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred -----------CCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0000 11135678999999999999999999998764
No 172
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-37 Score=336.35 Aligned_cols=256 Identities=23% Similarity=0.318 Sum_probs=208.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 457888999999999999999986 789999999854332 234567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 85 EYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp ECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999998653 2589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. ........|+..|+|||++.+..+ +.++||||+|+++|||++|+.||............|.......
T Consensus 159 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 228 (276)
T 2yex_A 159 NR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-------- 228 (276)
T ss_dssp TE--ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS--------
T ss_pred cc--hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc--------
Confidence 21 112334578999999999987665 7789999999999999999999986543333333332211100
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.+ .......+.+++.+|++.||++|||+.|++++-
T Consensus 229 ------~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 229 ------NP-------WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp ------TT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred ------Cc-------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 00 011235678999999999999999999998753
No 173
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.8e-38 Score=346.10 Aligned_cols=266 Identities=19% Similarity=0.274 Sum_probs=210.9
Q ss_pred eeecccc-ccccCCCCcc-ccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEE
Q 039922 671 QRVSFNE-DDILPHLTEQ-NLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLL 746 (973)
Q Consensus 671 ~~~~~~~-~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~ 746 (973)
..+.|.. +.+.++|... +.||+|+||.||+|+.. +|+.||+|++............+.+|+.++++++ ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 3445554 5555667776 89999999999999987 6999999999765555556778899999999995 69999999
Q ss_pred eEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CC
Q 039922 747 MCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EM 823 (973)
Q Consensus 747 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~ 823 (973)
+++...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCC
Confidence 99999999999999999999999986532 23689999999999999999999999 9999999999999998 78
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHH
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRW 903 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~ 903 (973)
.+||+|||+++....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||... ...+....
T Consensus 172 ~~kL~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~ 244 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACE-----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE--DNQETYLN 244 (327)
T ss_dssp CEEECCGGGCEEC--------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHH
T ss_pred cEEEeeCccccccCCccc-----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CchHHHHH
Confidence 999999999987643321 23357899999999999999999999999999999999999999753 22233222
Q ss_pred HHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 904 VTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+.......+.. ........+.+++.+|+++||++|||+.|++++
T Consensus 245 i~~~~~~~~~~------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVNVDYSEE------------------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTCCCCCTT------------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhcccccCch------------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 22222111000 001223568899999999999999999999876
No 174
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.7e-38 Score=337.41 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=207.1
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|+..+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 46788999999999999999999888899999995432 23567899999999999999999999986 456899999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+.......
T Consensus 88 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp CCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred cCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 999999999997532 11488999999999999999999999 99999999999999999999999999998764332
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. .......++..|+|||++.++.++.++||||||+++|||++ |+.||... ...+....+.......
T Consensus 164 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~-------- 230 (279)
T 1qpc_A 164 Y---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGYRMV-------- 230 (279)
T ss_dssp E---ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCC--------
T ss_pred c---ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhcccCCC--------
Confidence 1 11233456789999999998889999999999999999999 88898653 2233333332221110
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
. .......+.+++.+|++.||++|||+.++++.|+..
T Consensus 231 -----~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 231 -----R--------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp -----C--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----C--------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 0 011235788999999999999999999999999874
No 175
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.1e-38 Score=363.68 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=198.3
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..++||+|+||.||+|+.. +|+.||+|++.... ........+.+|+.+++.++||||+++++++...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 457889999999999999999976 78999999985432 1223345678899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHN-DCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999997653 48999999999999999999998 7 99999999999999999999999999997543
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+.......+
T Consensus 301 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~p----- 369 (446)
T 4ejn_A 301 KDG----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEIRFP----- 369 (446)
T ss_dssp C---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC-----
T ss_pred CCC----cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHHhCCCCCC-----
Confidence 222 2234467999999999999999999999999999999999999999753 33334443333221100
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-----SMRRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 965 (973)
......+.+++.+|+++||++|| ++.|+++|
T Consensus 370 -----------------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 370 -----------------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -----------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----------------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 11235678999999999999999 99999875
No 176
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=344.58 Aligned_cols=258 Identities=26% Similarity=0.354 Sum_probs=201.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCE----EEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGET----VAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
.++|+..++||+|+||.||+|++. +++. ||+|.+.... .....+.+.+|+.++++++||||+++++++..++ .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 357899999999999999999875 4543 5777774332 3445677899999999999999999999998765 7
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++|+||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred eEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 889999999999999986533 589999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
....... .......+|..|+|||++.+..++.++|||||||++|||++ |..||... ....+...+........+
T Consensus 167 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~~~~- 241 (327)
T 3lzb_A 167 LGAEEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQP- 241 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCCCCCC-
T ss_pred ccCcccc--ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCCCCC-
Confidence 6543321 12233456788999999999999999999999999999999 99999753 333444443332211110
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+.+++.+|++.||++||++.|+++.|+...
T Consensus 242 --------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 242 --------------------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp --------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 112346889999999999999999999999998753
No 177
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=357.03 Aligned_cols=258 Identities=22% Similarity=0.252 Sum_probs=204.6
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..++||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|..++..++||||+++++++.+.+..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4568999999999999999999986 799999999953211 11223347889999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+|||+++...
T Consensus 139 VmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp EECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheecc
Confidence 9999999999999976532 589999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCcccccccc-------CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhcc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAY-------TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLS 910 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... .......||+.|+|||++. .+.++.++|||||||++|||++|+.||... ...+....+......
T Consensus 214 ~~~~---~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~~~ 288 (412)
T 2vd5_A 214 ADGT---VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAETYGKIVHYKEH 288 (412)
T ss_dssp TTSC---EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHH
T ss_pred CCCc---cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhcccC
Confidence 3322 1123457999999999987 457899999999999999999999999753 233333333221111
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCC---CCHHHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINR---PSMRRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~R---ps~~evl~~ 965 (973)
... +. .......++.+++.+|++ +|++| |++.|+++|
T Consensus 289 ~~~------------p~-----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 289 LSL------------PL-----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CCC------------C---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cCC------------Cc-----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 000 00 001123578899999999 99998 589999875
No 178
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.6e-37 Score=363.44 Aligned_cols=256 Identities=25% Similarity=0.336 Sum_probs=205.0
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
..+.++|+..+.||+|+||+||+|+.+ +++.||+|++.+..........+.+|+.+++.++||||+++++++...+..|
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 112 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 445667999999999999999999986 7899999999765544445667899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CCceEEeccCcc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EMVPRVADFGLA 833 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGl~ 833 (973)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 113 lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999999887653 488999999999999999999999 9999999999999976 455999999999
Q ss_pred hhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
+...... ......||+.|+|||++. +.++.++||||+||++|+|++|..||... ...++...+.......+.
T Consensus 187 ~~~~~~~-----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 187 AVFENQK-----KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQEILRKVEKGKYTFDS 258 (494)
T ss_dssp EECBTTB-----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCS
T ss_pred eECCCCc-----cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCc
Confidence 8764332 233467999999999876 56899999999999999999999999753 334444444443322111
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. .. ......+.+++.+|+++||++|||+.|++++
T Consensus 259 ~------------~~------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 259 P------------EW------KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp G------------GG------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred h------------hc------ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1 00 1123568899999999999999999999865
No 179
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-37 Score=346.28 Aligned_cols=268 Identities=22% Similarity=0.293 Sum_probs=202.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC---
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD--- 753 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 753 (973)
.++.++|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.+|+++++.++||||+++++++...+
T Consensus 21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc
Confidence 456678999999999999999999985 7999999999666555566678899999999999999999999997653
Q ss_pred ---eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEecc
Q 039922 754 ---FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADF 830 (973)
Q Consensus 754 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 830 (973)
..|+||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred cCceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 459999999 78999998763 488999999999999999999999 9999999999999999999999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATL 909 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 909 (973)
|+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||... +..+....+.....
T Consensus 173 g~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~l~~i~~~~g 243 (367)
T 1cm8_A 173 GLARQADSE-------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS--DHLDQLKEIMKVTG 243 (367)
T ss_dssp TTCEECCSS-------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHC
T ss_pred ecccccccc-------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHhcC
Confidence 999865322 234578999999999877 67999999999999999999999999753 22222222222211
Q ss_pred cCCCccccCc------------ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 910 SSPERGCCRD------------LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 910 ~~~~~~~~~~------------l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.. .... +.+.....+ ..........+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 244 TPPAE-FVQRLQSDEAKNYMKGLPELEKKDF--ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCCHH-HHHTCSCHHHHHHHHHSCCCCCCCG--GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCHH-HHHHhhhHHHHHHHHhCCCCCCCCH--HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 11100 0000 000000000 00011224578899999999999999999999986
No 180
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.8e-38 Score=339.08 Aligned_cols=257 Identities=25% Similarity=0.321 Sum_probs=201.8
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
..+.++|...+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 96 (285)
T 3is5_A 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY 96 (285)
T ss_dssp SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE
Confidence 455678999999999999999999976 689999999864432 334567899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe---CCCCceEEeccCc
Q 039922 757 LVYEYMPNGSLADMLHEKG-RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL---DAEMVPRVADFGL 832 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl 832 (973)
+||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 9999999999999886432 123589999999999999999999999 99999999999999 4568899999999
Q ss_pred chhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
+........ .....||+.|+|||++. +.++.++||||+|+++|||++|+.||... ........+........
T Consensus 174 a~~~~~~~~-----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~ 245 (285)
T 3is5_A 174 AELFKSDEH-----STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYA 245 (285)
T ss_dssp CCC---------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC
T ss_pred ceecCCccc-----CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--CHHHHHhhhccCCcccc
Confidence 976543321 23456899999999875 57889999999999999999999999753 22222222222111100
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
... ......+.+++.+|+++||++|||+.|++++
T Consensus 246 ---------------~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 246 ---------------VEC----RPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---------------C------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---------------ccc----CcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0123567899999999999999999999875
No 181
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=357.25 Aligned_cols=330 Identities=22% Similarity=0.202 Sum_probs=232.4
Q ss_pred CCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccC
Q 039922 243 FLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLND 322 (973)
Q Consensus 243 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~ 322 (973)
+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------------------ 94 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL------------------ 94 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS------------------
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc------------------
Confidence 45555555555555555555555555555555555555555555555555555555555553
Q ss_pred CcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCC
Q 039922 323 NYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIP 402 (973)
Q Consensus 323 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 402 (973)
..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 95 -----~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 95 -----IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp -----CCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred -----cCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 333444555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCc
Q 039922 403 ESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQ 482 (973)
Q Consensus 403 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~ 482 (973)
..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.++.......+|+.|++++|++++..+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 56777778888888888888777778888888888888888877777777777778999999999999665578899999
Q ss_pred CcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCC
Q 039922 483 LQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSS 562 (973)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 562 (973)
|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 99999999999988888899999999999999999998899999999999999999999977777889999999999999
Q ss_pred CcCccccChhhhcccccceeccCCcCcccCCCC
Q 039922 563 NLLTGEIPLELTKLKLNQFNISHNKLYGEVPSD 595 (973)
Q Consensus 563 N~l~~~~p~~l~~l~l~~l~l~~N~l~g~~p~~ 595 (973)
|++++..+.....-....+++.++...+.-|..
T Consensus 330 N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 330 NPLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp SCEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CCccCccchHhHHhhhhccccCccCceeCCchH
Confidence 999875442211112333455555555544543
No 182
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.9e-38 Score=365.67 Aligned_cols=254 Identities=26% Similarity=0.338 Sum_probs=207.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..++||+|+||.||+|+.+ +|+.||+|++.+... .......+.+|+.+++.++|||||++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888999999999999999986 799999999854321 123345678999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 263 mEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999876432 3489999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC--chhHHHHHHHHhccCCCccc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE--NKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 916 (973)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.+......
T Consensus 339 ~~-----~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~------ 407 (576)
T 2acx_A 339 GQ-----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE------ 407 (576)
T ss_dssp TC-----CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC------
T ss_pred Cc-----cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc------
Confidence 32 223457999999999999999999999999999999999999999864321 12233332221111
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-----SMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 965 (973)
. . ......+.+++.+|+++||++|| ++.||++|
T Consensus 408 ---~--------p-----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 ---Y--------S-----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---C--------C-----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---C--------C-----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 0 11235688999999999999999 78998875
No 183
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2e-37 Score=335.26 Aligned_cols=256 Identities=23% Similarity=0.304 Sum_probs=205.3
Q ss_pred cCCCCccccccccCCeeEEEEEECC----CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKS----GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
.++|+..+.||+|+||.||+|++.. +..||+|++.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4578889999999999999998652 3369999985442 34456778999999999999999999999865 4568
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 99999999999999976532 588999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
..... .......++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+........+
T Consensus 164 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~--~~~~~~~~~~~~~~~~~~-- 236 (281)
T 3cc6_A 164 EDEDY---YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL--ENKDVIGVLEKGDRLPKP-- 236 (281)
T ss_dssp ------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CGGGHHHHHHHTCCCCCC--
T ss_pred ccccc---cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC--ChHHHHHHHhcCCCCCCC--
Confidence 44322 11233456789999999998899999999999999999998 99999753 333444444333211110
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++||++.|++++|+..
T Consensus 237 -------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 237 -------------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp -------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 01235688999999999999999999999999874
No 184
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=347.09 Aligned_cols=270 Identities=14% Similarity=0.149 Sum_probs=203.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchh---------HHHHHHHHHHHhcCCCCCeeeEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPET---------ETVFRSEIETLGRVRHGNVVKLLM 747 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~ 747 (973)
.++|+..+.||+|+||.||+|+.. ++..||+|++......... ...+.+|+..++.++|+||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357899999999999999999986 5788999998644321111 123567888999999999999999
Q ss_pred EEec----CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC
Q 039922 748 CCSG----QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM 823 (973)
Q Consensus 748 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 823 (973)
++.. .+..|+||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9987 77899999999 999999997654 589999999999999999999999 999999999999998887
Q ss_pred --ceEEeccCcchhccccCCC---ccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCch
Q 039922 824 --VPRVADFGLAKALQSQEGQ---SDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENK 898 (973)
Q Consensus 824 --~~kl~DfGl~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~ 898 (973)
.+||+|||+++.+...... .........||..|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 9999999999876543221 11222456799999999999999999999999999999999999999965333333
Q ss_pred hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 899 DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
............ .+. .+.+... . ......+.+++.+|++.||++||++.+|++.|+...
T Consensus 269 ~~~~~~~~~~~~-~~~----~~~~~~~----~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 269 AVQTAKTNLLDE-LPQ----SVLKWAP----S----GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHT-TTH----HHHHHSC----T----TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHHhhccc-ccH----HHHhhcc----c----cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 222222222211 110 0000000 0 012357899999999999999999999999998743
No 185
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-38 Score=348.76 Aligned_cols=265 Identities=28% Similarity=0.372 Sum_probs=206.8
Q ss_pred ccCCC-CccccccccCCeeEEEEEEC-----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec--
Q 039922 680 ILPHL-TEQNLIGSGGSCRVYKVKLK-----SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG-- 751 (973)
Q Consensus 680 ~~~~~-~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-- 751 (973)
+.++| +..+.||+|+||.||++.+. +++.||||++... ......+.+.+|++++++++||||+++++++..
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC
Confidence 34455 88999999999999988653 6889999999644 334556778999999999999999999999987
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
....++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred CceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcc
Confidence 46789999999999999999764 388999999999999999999999 99999999999999999999999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCc---------hhHHH
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGEN---------KDIVR 902 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~---------~~~~~ 902 (973)
++......... ........+|..|+|||++.+..++.++||||+|+++|||++|+.||....... .....
T Consensus 180 ~a~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 258 (318)
T 3lxp_A 180 LAKAVPEGHEY-YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258 (318)
T ss_dssp GCEECCTTCSE-EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHH
T ss_pred ccccccccccc-cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHH
Confidence 99876543221 112234567888999999999899999999999999999999999986421100 00000
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.+...... .... .........+.+++.+|++.||++|||+.|+++.|+...
T Consensus 259 ~~~~~~~~----------------~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 259 RLTELLER----------------GERL-PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHHHHHHT----------------TCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhc----------------ccCC-CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 01111100 0000 001122467899999999999999999999999998753
No 186
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=347.32 Aligned_cols=271 Identities=20% Similarity=0.256 Sum_probs=200.7
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57889999999999999999987 789999999853321 1112234579999999999999999999999999999999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CCS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 996 699998876533 588999999999999999999999 99999999999999999999999999997654322
Q ss_pred CCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
.......||..|+|||++.+ ..++.++||||+||++|||++|+.||... ...+....+...........++..
T Consensus 155 ----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 155 ----KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS--TVEEQLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ----cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCCChHhchhh
Confidence 22334578999999999876 56899999999999999999999999753 334444444443333222222111
Q ss_pred ccc--ccc---CCCCCCC---CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 920 LNQ--LID---PRMDLST---CDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 920 l~~--~~d---~~l~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
... ... +...... ........+.+++.+|++.||++|||+.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 100 000 0000000 001123567899999999999999999999875
No 187
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-37 Score=361.24 Aligned_cols=202 Identities=26% Similarity=0.328 Sum_probs=160.6
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec-----
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG----- 751 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----- 751 (973)
..+.++|+..++||+|+||+||+|+.+ +|+.||||++..........+.+.+|++++++++|||||++++++..
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence 345678999999999999999999876 78999999997665566667789999999999999999999999843
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
.+..|+||||+ +|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 129 FDELYVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp CCCEEEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 35689999998 579999887543 589999999999999999999999 99999999999999999999999999
Q ss_pred cchhccccCCCc-----------------------cccccccccccCccccccc-cCCCCCCCCChhhHHHHHHHHHcC
Q 039922 832 LAKALQSQEGQS-----------------------DDAMSCVAGSYGYIAPEYA-YTKKVTEKSDVYSFGVVLMELVTG 886 (973)
Q Consensus 832 l~~~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg 886 (973)
+++......... .......+||+.|+|||++ .+..++.++||||+||++|||++|
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 998765332110 0123456789999999976 566799999999999999999994
No 188
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=369.73 Aligned_cols=250 Identities=23% Similarity=0.342 Sum_probs=200.5
Q ss_pred cccccCCeeEEEEEEC---CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEeccCCC
Q 039922 689 LIGSGGSCRVYKVKLK---SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEYMPNG 765 (973)
Q Consensus 689 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 765 (973)
.||+|+||.||+|.++ ++..||||+++.. ......+.+.+|++++++++|||||++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 7999999999999874 4667999999644 233456789999999999999999999999976 5689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCccc
Q 039922 766 SLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDD 845 (973)
Q Consensus 766 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~ 845 (973)
+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.+....... .
T Consensus 421 ~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~-~ 494 (613)
T 2ozo_A 421 PLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY-T 494 (613)
T ss_dssp BHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred cHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee-e
Confidence 9999997543 3589999999999999999999999 99999999999999999999999999998765433211 1
Q ss_pred cccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccc
Q 039922 846 AMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLI 924 (973)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 924 (973)
......+++.|+|||++.++.++.++|||||||++|||++ |+.||... ...++...+........+
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~~~p----------- 561 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGKRMECP----------- 561 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CSHHHHHHHHTTCCCCCC-----------
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCCCCC-----------
Confidence 1222345689999999999999999999999999999998 99999763 334445544433221111
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 925 DPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 925 d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+||+.||++||++.+|++.|+..
T Consensus 562 ----------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 562 ----------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp ----------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11235788999999999999999999999999873
No 189
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.8e-38 Score=347.15 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=202.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCee
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 755 (973)
..+.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+.... ..+|++++.++ +||||+++++++.+++..
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 345667999999999999999999986 6889999999644322 34577788777 799999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC----CceEEeccC
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE----MVPRVADFG 831 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG 831 (973)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++.++ +.+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999999987643 589999999999999999999999 99999999999998543 359999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC-CchhHHHHHHHHhcc
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG-ENKDIVRWVTEATLS 910 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~ 910 (973)
+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...++...+......
T Consensus 166 ~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 241 (342)
T 2qr7_A 166 FAKQLRAENG----LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS 241 (342)
T ss_dssp TCEECBCTTC----CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC
T ss_pred CcccCcCCCC----ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc
Confidence 9987644322 22345789999999999888899999999999999999999999975322 223334433332221
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+.. ........+.+++.+|++.||++||++.|++++
T Consensus 242 ~~~~------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 LSGG------------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCST------------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCcc------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1000 001223568899999999999999999999875
No 190
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-37 Score=340.43 Aligned_cols=263 Identities=27% Similarity=0.395 Sum_probs=205.2
Q ss_pred CCCCccccccccCCeeEEEEEE-----CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC--Ce
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKL-----KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ--DF 754 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 754 (973)
+.|+..+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4578899999999999999984 368999999996443 233456789999999999999999999999876 66
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 8999999999999999965433 589999999999999999999999 99999999999999999999999999998
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCC----------CCchhHHHHH
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSF----------GENKDIVRWV 904 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~----------~~~~~~~~~~ 904 (973)
........ ........||..|+|||++.+..++.++||||+|+++|||++|+.|+.... ..........
T Consensus 175 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 175 AIETDKEY-YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp ECCTTCCE-EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred cccCCCcc-eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 76543321 122334567888999999999999999999999999999999998864311 0111111111
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
....... .. .........+.+++.+|++.||++|||+.|+++.|+..
T Consensus 254 ~~~~~~~---------------~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 254 NTLKEGK---------------RL---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHTTC---------------CC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccC---------------CC---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1111110 00 00112346788999999999999999999999999864
No 191
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.7e-37 Score=336.25 Aligned_cols=253 Identities=22% Similarity=0.319 Sum_probs=203.4
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC----chhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK----PETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
++|+..+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999987 7999999998654322 124677899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC----ceEEeccCc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM----VPRVADFGL 832 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfGl 832 (973)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999997643 489999999999999999999999 999999999999998877 899999999
Q ss_pred chhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
+....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||... ...+....+.......+
T Consensus 159 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~ 231 (283)
T 3bhy_A 159 AHKIEAGN-----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--TKQETLTNISAVNYDFD 231 (283)
T ss_dssp CEECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCCC
T ss_pred ceeccCCC-----cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--chHHHHHHhHhcccCCc
Confidence 97654322 123456899999999999999999999999999999999999999753 22222222211111000
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+.. ......+.+++.+|++.||++||++.|++++
T Consensus 232 --------~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 232 --------EEYF----------SNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp --------HHHH----------TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred --------chhc----------ccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0000 0123568899999999999999999999875
No 192
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.2e-37 Score=342.73 Aligned_cols=263 Identities=25% Similarity=0.355 Sum_probs=208.0
Q ss_pred cccCCCCccccccccCCeeEEEEEE------CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKL------KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ 752 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 752 (973)
...++|+..+.||+|+||.||+|+. .+++.||+|++... ........+.+|+.++++++||||+++++++...
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 3456899999999999999999984 35789999999533 3345566789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhhhccCCC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CCce
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRS----GSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EMVP 825 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~ 825 (973)
+..|+||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 9999999999999999999865321 3488999999999999999999999 9999999999999984 4569
Q ss_pred EEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHH
Q 039922 826 RVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWV 904 (973)
Q Consensus 826 kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 904 (973)
||+|||++......... .......|++.|+|||++.+..++.++||||||+++|||++ |..||... ......+.+
T Consensus 183 kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~ 258 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYY--RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFV 258 (327)
T ss_dssp EECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHH
T ss_pred EECcccccccccccccc--ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHH
Confidence 99999999866443321 12234567899999999998999999999999999999998 88888653 333344443
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
........+ ......+.+++.+|++.||++||++.|++++|+...
T Consensus 259 ~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 259 TSGGRMDPP---------------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HTTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCC---------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 332211100 112356889999999999999999999999998743
No 193
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.4e-37 Score=363.35 Aligned_cols=256 Identities=25% Similarity=0.328 Sum_probs=209.2
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
..+.++|++.++||+|+||+||+|+.+ +++.||||++.+..........+.+|++++++++||||+++++++...+..|
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence 456678999999999999999999986 7999999998543333344567899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC---CCCceEEeccCcc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD---AEMVPRVADFGLA 833 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGl~ 833 (973)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp EEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999999887653 489999999999999999999999 999999999999995 4667999999999
Q ss_pred hhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... ...+....+.........
T Consensus 172 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~ 243 (486)
T 3mwu_A 172 TCFQQNT-----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDL 243 (486)
T ss_dssp TTBCCC---------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCSCS
T ss_pred eECCCCC-----ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCC
Confidence 8764332 2334579999999999875 5899999999999999999999999753 333444444443222111
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. . ......+.+++.+|+++||++|||+.|++++
T Consensus 244 ~~------------~------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 PQ------------W------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG------------G------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cc------------c------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0 1123567899999999999999999999986
No 194
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.8e-37 Score=337.28 Aligned_cols=249 Identities=26% Similarity=0.354 Sum_probs=201.4
Q ss_pred CCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec----CCeeEE
Q 039922 683 HLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG----QDFNIL 757 (973)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 757 (973)
.|+..+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4777889999999999999876 68899999997655556667789999999999999999999998865 456899
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEeCCCCCCEEeC-CCCceEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPA--IVHRDVKSHNILLD-AEMVPRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfGl~~ 834 (973)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+||+|||++.
T Consensus 107 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999997643 488999999999999999999999 7 99999999999998 78999999999997
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
..... ......||+.|+|||++. +.++.++||||+|+++|||++|+.||.... ........+...... .
T Consensus 181 ~~~~~------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~---~ 249 (290)
T 1t4h_A 181 LKRAS------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKP---A 249 (290)
T ss_dssp GCCTT------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCC---G
T ss_pred ccccc------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-cHHHHHHHHhccCCc---c
Confidence 54322 123356899999999876 468999999999999999999999997532 222222222111100 0
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+ ......+.+++.+|++.||++|||+.|++++
T Consensus 250 --------~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 --------SFD---------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp --------GGG---------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --------ccC---------CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 001 1112468899999999999999999999875
No 195
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.9e-37 Score=339.64 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=205.6
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
.+.++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 45567889999999999999999986 79999999996432 2334568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe---CCCCceEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL---DAEMVPRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl~~ 834 (973)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999987653 488999999999999999999999 99999999999999 788999999999987
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+.......+.
T Consensus 158 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~- 228 (304)
T 2jam_A 158 MEQNG------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFES- 228 (304)
T ss_dssp CCCCB------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCT-
T ss_pred ecCCC------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCc-
Confidence 54321 123356899999999999999999999999999999999999999753 233333333332211000
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+ ........+.+++.+|++.||++||++.|++++
T Consensus 229 -----------~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 -----------P------FWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -----------T------TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -----------c------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 001223578899999999999999999999875
No 196
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.4e-38 Score=346.58 Aligned_cols=273 Identities=28% Similarity=0.357 Sum_probs=207.8
Q ss_pred CCCCccccccccCCeeEEEEEE-----CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe--cCCe
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKL-----KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS--GQDF 754 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 754 (973)
++|+..+.||+|+||.||+|++ .+++.||+|++.. ......+.+.+|++++++++|+||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc--CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 4688899999999999999984 3688999999953 34455677899999999999999999999886 4567
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccce
Confidence 8999999999999999976432 589999999999999999999999 99999999999999999999999999998
Q ss_pred hccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
........ ........||..|+|||++.+..++.++||||+|+++|||++|+.||.... ....... .......
T Consensus 176 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~---~~~~~~~---~~~~~~~ 248 (327)
T 3lxl_A 176 LLPLDKDY-YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS---AEFLRMM---GCERDVP 248 (327)
T ss_dssp ECCTTCSE-EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH---HHHHHHC---C----CC
T ss_pred ecccCCcc-ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc---chhhhhc---ccccccc
Confidence 76433221 112233567888999999999899999999999999999999999986421 1100000 0000000
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
....+.+.+...... .........+.+++.+|+++||++|||+.|++++|+...
T Consensus 249 -~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 249 -ALSRLLELLEEGQRL-PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp -HHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred -cHHHHHHHhhcccCC-CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000000000000 011223467889999999999999999999999998753
No 197
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.9e-37 Score=341.69 Aligned_cols=262 Identities=27% Similarity=0.369 Sum_probs=210.3
Q ss_pred cCCCCccccccccCCeeEEEEEE------CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL------KSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQD 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 753 (973)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999974 356899999996443 334556789999999999 6999999999987654
Q ss_pred -eeEEEEeccCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe
Q 039922 754 -FNILVYEYMPNGSLADMLHEKGR-------------SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL 819 (973)
Q Consensus 754 -~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 819 (973)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEE
Confidence 58999999999999999976542 12278999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCch
Q 039922 820 DAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENK 898 (973)
Q Consensus 820 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~ 898 (973)
++++.+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++|||++ |..||.... ...
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-~~~ 258 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDY--VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-IDE 258 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-CSH
T ss_pred CCCCCEEECCCccccccccCccc--eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc-hhH
Confidence 99999999999999866443221 22234567889999999999999999999999999999998 999987542 223
Q ss_pred hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 899 DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.....+........+ ......+.+++.+|++.||++|||+.||+++|+...
T Consensus 259 ~~~~~~~~~~~~~~~---------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 259 EFCRRLKEGTRMRAP---------------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HHHHHHHHTCCCCCC---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCccCCCC---------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 333333332211000 012356889999999999999999999999998753
No 198
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-37 Score=345.24 Aligned_cols=273 Identities=23% Similarity=0.334 Sum_probs=205.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467899999999999999999987 5899999999766655566677889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp ECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999988888765433 489999999999999999999999 9999999999999999999999999999766433
Q ss_pred CCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc--
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC-- 916 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 916 (973)
.. ......||..|+|||++.+. .++.++||||+||++|||++|+.||... ...+....+........+...
T Consensus 178 ~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 178 GE----VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD--SDIDQLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cc----ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC--CcHHHHHHHHHHhCCCChhhhhH
Confidence 21 22345689999999998875 7899999999999999999999999753 222222222211111000000
Q ss_pred ---cCcccccccCCCCCCCC----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 ---CRDLNQLIDPRMDLSTC----DYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ---~~~l~~~~d~~l~~~~~----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.........+.+..... .+.....+.+++.+|++.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000001111110000 01224678999999999999999999999875
No 199
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=335.75 Aligned_cols=253 Identities=23% Similarity=0.359 Sum_probs=184.1
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|+.++++++||||+++++++...+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 3467889999999999999999974 799999999843211 11224678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999997643 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .... .
T Consensus 164 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~---~----------- 223 (278)
T 3cok_A 164 MPHE----KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLN---K----------- 223 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------
T ss_pred CCCC----cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHH---H-----------
Confidence 3221 122356899999999999989999999999999999999999999753211 1110 0
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+....... .......+.+++.+|++.||++||++.|++++
T Consensus 224 -----~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 224 -----VVLADYEM---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -----CCSSCCCC---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----HhhcccCC---ccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 00000000 01123567899999999999999999999875
No 200
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.6e-37 Score=333.61 Aligned_cols=272 Identities=24% Similarity=0.306 Sum_probs=204.4
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999987 79999999986544334444678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|++ ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 997 799999876532 3588999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCccccccccccccCccccccccCCC-CCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKK-VTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
.......+|..|+|||++.+.. ++.++||||||+++|||++|+.||... ...+....+.......... ....
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~-~~~~ 230 (299)
T 2r3i_A 158 ----RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD--SEIDQLFRIFRTLGTPDEV-VWPG 230 (299)
T ss_dssp ----BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCTT-TSTT
T ss_pred ----cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHHHhCCCchh-hhhH
Confidence 1223356899999999988765 789999999999999999999999753 2222222222221111110 0011
Q ss_pred cccccc--CCCCC-CCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 920 LNQLID--PRMDL-STCD-----YEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 920 l~~~~d--~~l~~-~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.....+ +.+.. .... ......+.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 111111 11100 0000 1124578899999999999999999999985
No 201
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-37 Score=339.30 Aligned_cols=262 Identities=22% Similarity=0.258 Sum_probs=199.5
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
....++|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++..++..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 344678999999999999999999986 788999999864432 233457789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEEEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 99999999999999998653 589999999999999999999999 999999999999999999999999999876
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
...... .......|+..|+|||++.+..++.++||||||+++|||++|+.||... ........+ ....+.
T Consensus 184 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~----~~~~~~- 253 (309)
T 2h34_A 184 TTDEKL---TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD--QLSVMGAHI----NQAIPR- 253 (309)
T ss_dssp ----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC--HHHHHHHHH----HSCCCC-
T ss_pred cccccc---ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHh----ccCCCC-
Confidence 643321 1223456899999999999999999999999999999999999999752 111111111 110000
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhhc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-SMRRVVELLRVD 969 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~ 969 (973)
. .... ......+.+++.+|++.||++|| ++.++++.|+..
T Consensus 254 ----~-~~~~---------~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 254 ----P-STVR---------PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp ----G-GGTS---------TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred ----c-cccC---------CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 0 0000 11234688999999999999999 999999999874
No 202
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.2e-37 Score=336.30 Aligned_cols=250 Identities=20% Similarity=0.280 Sum_probs=202.8
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
+.++|+..+.||+|+||.||+|+.. +++.||+|++............+.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567889999999999999999987 799999999976655566677888999999999 89999999999999999999
Q ss_pred EEeccCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC--------------
Q 039922 758 VYEYMPNGSLADMLHEKGR-SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE-------------- 822 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-------------- 822 (973)
||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999976422 13589999999999999999999999 99999999999999844
Q ss_pred -----CceEEeccCcchhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCC
Q 039922 823 -----MVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGE 896 (973)
Q Consensus 823 -----~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~ 896 (973)
..+||+|||.+....... ...||..|+|||++.+. .++.++|||||||++|||++|..|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--- 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ--------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--- 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC--------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---
T ss_pred ccCCceEEEEcccccccccCCcc--------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---
Confidence 479999999987654322 23589999999998765 5668999999999999999998776431
Q ss_pred chhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 897 NKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
. ....+...... .+. ......+.+++.+|++.||++|||+.|++++-
T Consensus 235 -~-~~~~~~~~~~~----------------~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 235 -D-QWHEIRQGRLP----------------RIP-----QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp -H-HHHHHHTTCCC----------------CCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred -h-HHHHHHcCCCC----------------CCC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 1 12212111111 000 01235688999999999999999999998764
No 203
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=334.79 Aligned_cols=255 Identities=23% Similarity=0.330 Sum_probs=200.4
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.+.|....+||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 345666779999999999999975 6889999999543 2344567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC-CCceEEeccCcchhccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA-EMVPRVADFGLAKALQS 838 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGl~~~~~~ 838 (973)
||+++++|.+++.........++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+.....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999998754444567889999999999999999999 9999999999999987 89999999999976543
Q ss_pred cCCCccccccccccccCccccccccCCC--CCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKK--VTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
... ......|+..|+|||++.+.. ++.++||||||+++|||++|+.||........... ........
T Consensus 176 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~---- 244 (295)
T 2clq_A 176 INP----CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVH---- 244 (295)
T ss_dssp ---------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH---HHHHHCCC----
T ss_pred CCC----cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH---hhcccccc----
Confidence 221 123456899999999987643 78899999999999999999999964221111111 11111100
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+.+. ......+.+++.+|++.||++||++.|++++
T Consensus 245 ---------~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 245 ---------PEIP-----ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---------CCCC-----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---------cccc-----ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 1123567899999999999999999999875
No 204
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.1e-37 Score=360.14 Aligned_cols=257 Identities=25% Similarity=0.321 Sum_probs=207.2
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc-----------hhHHHHHHHHHHHhcCCCCCeeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP-----------ETETVFRSEIETLGRVRHGNVVKL 745 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l 745 (973)
..+.++|...++||+|+||+||+|+.+ +++.||+|++....... ...+.+.+|+.++++++||||+++
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 567788999999999999999999986 68899999996543221 335678899999999999999999
Q ss_pred EeEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC--
Q 039922 746 LMCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM-- 823 (973)
Q Consensus 746 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-- 823 (973)
++++.+.+..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCC
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999999987653 489999999999999999999999 999999999999998776
Q ss_pred -ceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHH
Q 039922 824 -VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVR 902 (973)
Q Consensus 824 -~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 902 (973)
.+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|..||... ...+...
T Consensus 186 ~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~ 257 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY-----KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ--NDQDIIK 257 (504)
T ss_dssp SSEEECCCTTCEECCTTS-----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHH
T ss_pred ccEEEEECCCCEEcCCCC-----ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHH
Confidence 69999999998764332 233457999999999886 56899999999999999999999999753 3344444
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.+.......+... . ......+.+++.+|+++||.+|||+.|++++-
T Consensus 258 ~i~~~~~~~~~~~------------~------~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 258 KVEKGKYYFDFND------------W------KNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp HHHHCCCCCCHHH------------H------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHcCCCCCCccc------------c------CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 4443322111000 0 01135688999999999999999999998763
No 205
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.2e-37 Score=370.46 Aligned_cols=251 Identities=25% Similarity=0.352 Sum_probs=201.9
Q ss_pred ccccccCCeeEEEEEEC---CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEeccCC
Q 039922 688 NLIGSGGSCRVYKVKLK---SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYEYMPN 764 (973)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 764 (973)
+.||+|+||.||+|.+. .++.||||+++.........+.+.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999996555455567789999999999999999999999975 457899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCcc
Q 039922 765 GSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSD 844 (973)
Q Consensus 765 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~ 844 (973)
|+|.+++.... .+++..++.|+.||+.||+|||++ +|+||||||+||++++++.+||+|||+++.+...... .
T Consensus 454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~-~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-Y 526 (635)
T ss_dssp EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-c
Confidence 99999997643 589999999999999999999999 9999999999999999999999999999877544321 1
Q ss_pred ccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCccccc
Q 039922 845 DAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQL 923 (973)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 923 (973)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ...++...+........+
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~~~p---------- 594 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERMGCP---------- 594 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCC----------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC----------
Confidence 12233456789999999999999999999999999999998 99999753 333444444333221111
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 924 IDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 924 ~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+||+.||++||++.+|++.|+..
T Consensus 595 -----------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 595 -----------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp -----------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11236788999999999999999999999999874
No 206
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.6e-37 Score=345.67 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=206.9
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC------chhHHHHHHHHHHHhcC-CCCCeeeEEeEEe
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK------PETETVFRSEIETLGRV-RHGNVVKLLMCCS 750 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 750 (973)
.+.++|...+.||+|+||.||+|+.+ +|+.||||++...... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567888999999999999999986 7999999998654321 11245678899999999 7999999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEecc
Q 039922 751 GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADF 830 (973)
Q Consensus 751 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 830 (973)
..+..|+||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEec
Confidence 9999999999999999999997643 589999999999999999999999 9999999999999999999999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccC------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHH
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWV 904 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~ 904 (973)
|++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ........+
T Consensus 245 G~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i 317 (365)
T 2y7j_A 245 GFSCHLEPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMI 317 (365)
T ss_dssp TTCEECCTTCC-----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHH
T ss_pred CcccccCCCcc-----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHH
Confidence 99987654322 234678999999998863 35888999999999999999999999752 233333333
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
......... +.. ......+.+++.+|++.||++|||+.|++++
T Consensus 318 ~~~~~~~~~------------~~~------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQFSS------------PEW------DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCCCCH------------HHH------SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCCCCC------------ccc------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 332211000 000 0113568899999999999999999999985
No 207
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.2e-37 Score=361.95 Aligned_cols=257 Identities=26% Similarity=0.341 Sum_probs=211.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
..+.++|+..++||+|+||.||+|+.+ +|+.||||++..... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 101 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF 101 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 345567999999999999999999987 799999999965433 234567789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe---CCCCceEEeccCc
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL---DAEMVPRVADFGL 832 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl 832 (973)
|+||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 102 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 99999999999999887643 589999999999999999999999 99999999999999 5678999999999
Q ss_pred chhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||... ...+....+........
T Consensus 176 a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 176 STHFEASK-----KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKVEKGKYTFE 247 (484)
T ss_dssp HHHBCCCC-----SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC
T ss_pred eEEccccc-----ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCC
Confidence 98764332 2334579999999999865 6899999999999999999999999753 33444444444332211
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
... . ......+.+++.+|+++||++|||+.|++++-
T Consensus 248 ~~~------------~------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 248 LPQ------------W------KKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp SGG------------G------GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred Ccc------------c------ccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 100 0 11235688999999999999999999998753
No 208
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-37 Score=360.57 Aligned_cols=256 Identities=21% Similarity=0.276 Sum_probs=206.7
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|...++||+|+||.||+|+.+ +|+.||+|++.+... .....+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999986 699999999953321 112345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 759 YEYMPNGSLADMLHEKGR-SGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
|||+++|+|.+++..... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999876432 33589999999999999999999999 99999999999999999999999999998764
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC--chhHHHHHHHHhccCCCcc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE--NKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~ 915 (973)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.+.......
T Consensus 341 ~~~~----~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~---- 412 (543)
T 3c4z_A 341 AGQT----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY---- 412 (543)
T ss_dssp TTCC----CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCC----
T ss_pred CCCc----ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCC----
Confidence 3322 123357999999999999999999999999999999999999999764221 122333222211110
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSM-----RRVVEL 965 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~evl~~ 965 (973)
.......+.+++.+|+++||++||++ .||+++
T Consensus 413 ------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 413 ------------------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ------------------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ------------------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 01123567889999999999999965 666653
No 209
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.9e-38 Score=338.30 Aligned_cols=250 Identities=25% Similarity=0.400 Sum_probs=203.7
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec-------
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG------- 751 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 751 (973)
+..+|+..+.||+|+||.||+|+.. +|+.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4457889999999999999999987 79999999995332 246789999999999999999998854
Q ss_pred ---------CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC
Q 039922 752 ---------QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE 822 (973)
Q Consensus 752 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 822 (973)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 445799999999999999997542 23589999999999999999999999 99999999999999999
Q ss_pred CceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHH
Q 039922 823 MVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVR 902 (973)
Q Consensus 823 ~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 902 (973)
+.+||+|||++........ .....|++.|+|||++.+..++.++||||||+++|||++|..|+.. ...
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~----~~~--- 226 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK-----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE----TSK--- 226 (284)
T ss_dssp TEEEECCCTTCEESSCCSC-----CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH----HHH---
T ss_pred CCEEECcchhheecccccc-----ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh----HHH---
Confidence 9999999999887644321 2335689999999999999999999999999999999999988642 111
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcccC
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKSS 972 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 972 (973)
+....... . +. ......+.+++.+|++.||++||++.|++++|+..+.+
T Consensus 227 ~~~~~~~~--------~----~~---------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 227 FFTDLRDG--------I----IS---------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHHHHHTT--------C----CC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred HHHHhhcc--------c----cc---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11111111 0 00 01124578899999999999999999999999886643
No 210
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.9e-37 Score=345.12 Aligned_cols=272 Identities=21% Similarity=0.221 Sum_probs=199.4
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC----
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD---- 753 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 753 (973)
.+.++|+..+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 45678999999999999999999876 6889999999765555566677889999999999999999999997654
Q ss_pred --eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 754 --FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 754 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
..|+||||++ |+|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 7899999996 678888753 378999999999999999999999 99999999999999999999999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+....+.......
T Consensus 173 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~ 245 (371)
T 2xrw_A 173 LARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT--DHIDQWNKVIEQLGTP 245 (371)
T ss_dssp C---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHC-CCCC
T ss_pred ccccccccc-----ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCC
Confidence 998654321 223457899999999999999999999999999999999999999753 2222211111110000
Q ss_pred CC------------------ccccCcccccccCC-CCC-CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 912 PE------------------RGCCRDLNQLIDPR-MDL-STCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 912 ~~------------------~~~~~~l~~~~d~~-l~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.+ ......+.+.+... ... ..........+.+++.+|++.||++|||++|++++-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred CHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 00 00000000000000 000 000122356899999999999999999999999863
No 211
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.1e-37 Score=333.34 Aligned_cols=253 Identities=22% Similarity=0.331 Sum_probs=207.7
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
...++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.+++.++|+||+++++++..++..+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 34567889999999999999999987 68899999986443 23445677889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+...
T Consensus 92 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 9999999999999887643 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ..+....+......
T Consensus 166 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~------ 233 (294)
T 2rku_A 166 EYDGE----RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKKNEYS------ 233 (294)
T ss_dssp CSTTC----CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTTCCC------
T ss_pred ccCcc----ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhhccCC------
Confidence 43221 1233568999999999999899999999999999999999999997532 22222211111100
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+. ......+.+++.+|++.||++|||+.|++++
T Consensus 234 -----------~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 234 -----------IP-----KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----------CC-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----------Cc-----cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0113567889999999999999999999875
No 212
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=367.22 Aligned_cols=257 Identities=30% Similarity=0.399 Sum_probs=209.1
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEEe
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 760 (973)
.++|+..+.||+|+||.||+|++.++..||||++.... ...+.|.+|++++++++|+||+++++++.+ +..|+|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 35678889999999999999999988899999995433 234678999999999999999999999876 67899999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccC
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQE 840 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~ 840 (973)
|+++|+|.++++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 999999999997532 12488999999999999999999999 99999999999999999999999999998764321
Q ss_pred CCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccCc
Q 039922 841 GQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCRD 919 (973)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (973)
. .......++..|+|||++.++.++.++|||||||++|||++ |+.||... ...++.+.+........+
T Consensus 418 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~~~~------ 486 (535)
T 2h8h_A 418 Y---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRMPCP------ 486 (535)
T ss_dssp H---HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--CHHHHHHHHHTTCCCCCC------
T ss_pred e---ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCC------
Confidence 1 11223456788999999999999999999999999999999 89998653 233444433322111000
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 920 LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 920 l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
......+.+++.+||+.||++|||+.+|++.|+....
T Consensus 487 ---------------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 487 ---------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ---------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 1123568899999999999999999999999998643
No 213
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.3e-38 Score=344.35 Aligned_cols=264 Identities=23% Similarity=0.326 Sum_probs=204.3
Q ss_pred CCCCccccccccCCeeEEEEEE-CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe----cCCeeE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKL-KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS----GQDFNI 756 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~ 756 (973)
++|+..+.||+|+||.||+|+. .+|+.||+|++.. ......+.+.+|++++++++||||+++++++. .....+
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 4689999999999999999998 4799999999843 34456677899999999999999999999986 345789
Q ss_pred EEEeccCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 757 LVYEYMPNGSLADMLHEKG-RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999987532 233689999999999999999999999 999999999999999999999999998875
Q ss_pred ccccCCCc-----cccccccccccCccccccccCCC---CCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHH
Q 039922 836 LQSQEGQS-----DDAMSCVAGSYGYIAPEYAYTKK---VTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 836 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 907 (973)
........ ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||.............+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~- 262 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN- 262 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-
Confidence 43221110 00112345789999999987544 6889999999999999999999995421111122221111
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
....+ ........+.+++.+|++.||++||++.|++++|+.+..
T Consensus 263 ~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 263 QLSIP--------------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp C--CC--------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred cCCCC--------------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 00000 001123578899999999999999999999999988654
No 214
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.6e-37 Score=339.40 Aligned_cols=253 Identities=22% Similarity=0.329 Sum_probs=208.2
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
...++|...+.||+|+||.||+++.. +++.||+|++.... ......+.+.+|+.+++.++|+||+++++++.+.+..+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 34567889999999999999999987 58899999986443 23445677899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 118 lv~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999999887643 589999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
..... ......||..|+|||++.+..++.++||||||+++|||++|+.||... ...+....+......
T Consensus 192 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~------ 259 (335)
T 2owb_A 192 EYDGE----RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYS------ 259 (335)
T ss_dssp CSTTC----CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCC------
T ss_pred ccCcc----cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHhcCCCC------
Confidence 43221 123457899999999999999999999999999999999999999753 222222222221111
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+ . ......+.+++.+|++.||++||++.|++++
T Consensus 260 ---~--------~-----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 ---I--------P-----KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---C--------C-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---C--------C-----ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0 0112467889999999999999999999875
No 215
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.9e-37 Score=337.18 Aligned_cols=256 Identities=23% Similarity=0.281 Sum_probs=190.5
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467889999999999999999985 7899999999655444444455566666788899999999999999999999999
Q ss_pred eccCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 760 EYMPNGSLADMLHEK-GRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 760 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
||++ |+|.+++... .....+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9996 6888877542 12336899999999999999999999853 899999999999999999999999999987644
Q ss_pred cCCCccccccccccccCccccccc----cCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYA----YTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||.............+......
T Consensus 163 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---- 233 (290)
T 3fme_A 163 DVA-----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 233 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred ccc-----ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC----
Confidence 322 2234689999999996 566788999999999999999999999975322222222222111111
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
... ......+.+++.+|+++||++|||+.|++++
T Consensus 234 -------------~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 234 -------------LPA----DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp -------------CCT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -------------ccc----ccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 000 1123568899999999999999999999874
No 216
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.6e-37 Score=341.03 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=202.8
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCE--EEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGET--VAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 756 (973)
.++|+..+.||+|+||.||+|+.. +|+. ||+|++.... .....+.+.+|+++++++ +||||+++++++...+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 357889999999999999999876 5664 4999885332 334456688999999999 8999999999999999999
Q ss_pred EEEeccCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC
Q 039922 757 LVYEYMPNGSLADMLHEKG-------------RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM 823 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 823 (973)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997643 123689999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHH
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVR 902 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~ 902 (973)
.+||+|||+++...... ......++..|+|||++.+..++.++||||+|+++|||++ |+.||... ...+...
T Consensus 180 ~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~ 252 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYE 252 (327)
T ss_dssp CEEECCTTCEESSCEEC-----CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHH
T ss_pred eEEEcccCcCccccccc-----cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--cHHHHHH
Confidence 99999999987433221 1223456789999999988889999999999999999998 99999753 2222222
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.+...... .. .......+.+++.+|++.||++|||+.|++++|+..
T Consensus 253 ~~~~~~~~----------------~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 253 KLPQGYRL----------------EK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HGGGTCCC----------------CC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhhcCCCC----------------CC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 22111000 00 011235688999999999999999999999999874
No 217
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-37 Score=355.10 Aligned_cols=257 Identities=21% Similarity=0.293 Sum_probs=195.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC------CchhHHHHHHHHHHHhcCCCCCeeeEEeEEe
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH------KPETETVFRSEIETLGRVRHGNVVKLLMCCS 750 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 750 (973)
..+.++|...+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 345678999999999999999999876 689999999864321 1122235789999999999999999999986
Q ss_pred cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC---CceEE
Q 039922 751 GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE---MVPRV 827 (973)
Q Consensus 751 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 827 (973)
. +..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 4 55799999999999999887543 589999999999999999999999 99999999999999754 45999
Q ss_pred eccCcchhccccCCCccccccccccccCccccccccC---CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHH
Q 039922 828 ADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT---KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWV 904 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~ 904 (973)
+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ....+.+.+
T Consensus 284 ~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~i 357 (419)
T 3i6u_A 284 TDFGHSKILGETS-----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQI 357 (419)
T ss_dssp CCSSTTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS-SSCCHHHHH
T ss_pred eecccceecCCCc-----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc-chHHHHHHH
Confidence 9999998764322 2334679999999999863 567889999999999999999999997532 223333333
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
........+ +.. ......+.+++.+|++.||++|||+.|++++
T Consensus 358 ~~~~~~~~~--------~~~----------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYNFIP--------EVW----------AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCCCCH--------HHH----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCCCCc--------hhh----------cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 322211000 000 0124578899999999999999999999986
No 218
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-37 Score=341.00 Aligned_cols=275 Identities=24% Similarity=0.296 Sum_probs=201.4
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc---hhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP---ETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF 754 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 754 (973)
...++|+..+.||+|+||.||+|+.. +|+.||+|++....... ...+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999986 68999999985432221 112457889999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.++||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 87 ~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFME-TDLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCS-EEHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCC-CCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999997 48988887543 3588899999999999999999999 99999999999999999999999999998
Q ss_pred hccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
....... ......||+.|+|||++.+. .++.++||||+||++|||++|..||... ...+....+.........
T Consensus 161 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~--~~~~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 161 SFGSPNR----AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD--SDLDQLTRIFETLGTPTE 234 (346)
T ss_dssp TTTSCCC----CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCCCCT
T ss_pred eccCCcc----cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHHHcCCCCh
Confidence 7643321 23345789999999998764 5789999999999999999999998753 222333333332222111
Q ss_pred ccccCcccccccCCC--CCCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRM--DLSTCD-----YEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l--~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
..+ .......+... ...... ......+.+++.+|++.||++|||+.|++++-
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 235 EQW-PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTS-SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred hhh-hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 111 11111111000 000000 12246789999999999999999999999864
No 219
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.2e-37 Score=346.40 Aligned_cols=272 Identities=22% Similarity=0.294 Sum_probs=206.0
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 457889999999999999999987 78999999996442 3455677899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++++|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 111 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred ECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999997654 4889999999999999999999831 7999999999999999999999999999765432
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCc-----
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPER----- 914 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 914 (973)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+....+..........
T Consensus 186 ~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3eqc_A 186 M------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD--AKELELMFGCQVEGDAAETPPRP 257 (360)
T ss_dssp C----------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC--HHHHHHHHC--------------
T ss_pred c------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHhcccccccCCCCCCCc
Confidence 2 223578999999999999999999999999999999999999997532 111111110000000000
Q ss_pred --------------cccCcccccccC---CCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 915 --------------GCCRDLNQLIDP---RMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 915 --------------~~~~~l~~~~d~---~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.......+.++. ..............+.+++.+|+++||++|||+.|++++-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred ccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000000000000 0000000111245788999999999999999999998753
No 220
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.4e-37 Score=353.06 Aligned_cols=207 Identities=23% Similarity=0.301 Sum_probs=173.0
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC----
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ---- 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 752 (973)
..+.++|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.+|++++++++|+||+++++++...
T Consensus 22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence 456778999999999999999999976 688999999976655666677899999999999999999999999765
Q ss_pred -CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 753 -DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 753 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
+..|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 57899999996 69999987543 589999999999999999999999 99999999999999999999999999
Q ss_pred cchhccccCCCc------------------cccccccccccCccccccc-cCCCCCCCCChhhHHHHHHHHHcCCCCCC
Q 039922 832 LAKALQSQEGQS------------------DDAMSCVAGSYGYIAPEYA-YTKKVTEKSDVYSFGVVLMELVTGKRPND 891 (973)
Q Consensus 832 l~~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg~~p~~ 891 (973)
+++......... ........||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 998765432110 0123557899999999986 56679999999999999999998655543
No 221
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2e-37 Score=334.70 Aligned_cols=252 Identities=30% Similarity=0.405 Sum_probs=198.9
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC-CeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ-DFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. |+.||+|++... ...+.+.+|++++++++||||+++++++... +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 457889999999999999999886 899999998532 2456789999999999999999999997654 5789999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++|+|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred ecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999999999975421 1378899999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 840 EGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+......
T Consensus 171 ~-------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~-------- 233 (278)
T 1byg_A 171 Q-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKM-------- 233 (278)
T ss_dssp ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTCCC--------
T ss_pred c-------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCCCC--------
Confidence 1 22356889999999998999999999999999999998 99998753 233333332221110
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
.. .......+.+++.+|++.||++||++.|+++.|+.++.
T Consensus 234 --------~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 234 --------DA-----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp --------CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CC-----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 00 01123578899999999999999999999999988653
No 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-36 Score=332.76 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=208.5
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
+..+.|+..+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 34457889999999999999999875 789999999964432 3445678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 98 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999999998642 589999999999999999999999 99999999999999999999999999997764
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.... ......|+..|+|||++.+..++.++||||||+++|||++|+.||... ........+......
T Consensus 171 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~------- 237 (303)
T 3a7i_A 171 DTQI----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNNPP------- 237 (303)
T ss_dssp TTBC----CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC-------
T ss_pred cccc----ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--CHHHHHHHhhcCCCC-------
Confidence 3321 123457899999999999999999999999999999999999999753 222223322221111
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.+. ......+.+++.+|++.||++|||+.|++++.
T Consensus 238 ---------~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 238 ---------TLE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ---------CCC-----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ---------CCc-----cccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 000 11135688999999999999999999998764
No 223
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.7e-36 Score=330.80 Aligned_cols=264 Identities=21% Similarity=0.292 Sum_probs=207.8
Q ss_pred cccCCCCccccccccCCeeEEEEEE-CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEE-ecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKL-KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCC-SGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 756 (973)
.+.++|+..+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+.+++.++|+++++.+.++ ..++..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 3457899999999999999999997 4799999999854432 23478899999999988766666554 6677889
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC---CCCceEEeccCcc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD---AEMVPRVADFGLA 833 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGl~ 833 (973)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++ +++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 8999999975432 589999999999999999999999 999999999999994 8899999999999
Q ss_pred hhccccCCCcc---ccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC-CchhHHHHHHHHhc
Q 039922 834 KALQSQEGQSD---DAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG-ENKDIVRWVTEATL 909 (973)
Q Consensus 834 ~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~ 909 (973)
+.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence 87654432111 112446799999999999999999999999999999999999999976322 22233333333222
Q ss_pred cCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 910 SSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 910 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
..+.. ... ......+.+++.+|++.||++||++.||++.|+..
T Consensus 236 ~~~~~--------~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 236 STPIE--------VLC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HSCHH--------HHT---------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred CCchH--------HHH---------hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 21110 000 01135688999999999999999999999999874
No 224
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=7.3e-37 Score=331.44 Aligned_cols=249 Identities=24% Similarity=0.365 Sum_probs=204.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... .......+.+|++++++++||||+++++++..++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 457889999999999999999986 678899999843211 122346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999997653 488999999999999999999999 999999999999999999999999999865432
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCR 918 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (973)
.. .....|+..|+|||++.+..++.++||||+|+++|||++|+.||... ...+....+......
T Consensus 167 ~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~-------- 230 (284)
T 2vgo_A 167 LR------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--SHTETHRRIVNVDLK-------- 230 (284)
T ss_dssp SC------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCC--------
T ss_pred cc------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--CHhHHHHHHhccccC--------
Confidence 21 22356899999999999999999999999999999999999999753 222222222111100
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 919 DLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 919 ~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+. ......+.+++.+|++.||++||++.|++++
T Consensus 231 ---------~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 231 ---------FP-----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ---------CC-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ---------CC-----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 00 1123567899999999999999999999875
No 225
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-37 Score=356.69 Aligned_cols=345 Identities=15% Similarity=0.122 Sum_probs=291.1
Q ss_pred CEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCc
Q 039922 245 SNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNY 324 (973)
Q Consensus 245 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~ 324 (973)
+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++| .
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-----------------------~ 67 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNEN-----------------------I 67 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTS-----------------------C
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCC-----------------------c
Confidence 45677777766 4454442 45666666666666555555665555555555555 4
Q ss_pred CCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCc
Q 039922 325 FTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPES 404 (973)
Q Consensus 325 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 404 (973)
+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|++++|++.+..+..
T Consensus 68 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 147 (477)
T 2id5_A 68 VSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA 147 (477)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTS
T ss_pred cCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhh
Confidence 44566778889999999999999999776677899999999999999999999999999999999999999999999999
Q ss_pred cCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCc
Q 039922 405 YGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQ 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 484 (973)
|..+++|++|++++|++++..+..|..+++|+.|++++|++.+..+..+..+++|+.|++++|++.+.+|.......+|+
T Consensus 148 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 227 (477)
T 2id5_A 148 FSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT 227 (477)
T ss_dssp STTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCS
T ss_pred ccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCcccc
Confidence 99999999999999999988888899999999999999999999899999999999999999999988888887788999
Q ss_pred EEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCc
Q 039922 485 AVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNL 564 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 564 (973)
+|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 228 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 307 (477)
T 2id5_A 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ 307 (477)
T ss_dssp EEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSC
T ss_pred EEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCc
Confidence 99999999996555789999999999999999998888999999999999999999999889999999999999999999
Q ss_pred CccccChhhhcc-cccceeccCCcCcccCCCCCcc-cccccccCCCCCCCCCC
Q 039922 565 LTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDH-DLFISSLLDNPGLCSPD 615 (973)
Q Consensus 565 l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~-~~~~~~~~~n~~~c~~~ 615 (973)
+++..+..+..+ .|+.|++++|++++..+..+.. ......+.++...|+.|
T Consensus 308 l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 308 LTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 997666677777 8999999999999865532211 11223455666667654
No 226
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.5e-36 Score=331.22 Aligned_cols=263 Identities=21% Similarity=0.288 Sum_probs=203.2
Q ss_pred ccCCCCccccccccCCeeEEEEEE-CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEE-ecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKL-KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCC-SGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 757 (973)
+.++|+..+.||+|+||.||+|+. .+++.||+|++...... ..+.+|+++++.++|++++..+.++ ..++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 456899999999999999999997 47899999987433222 2477899999999988766666555 66788899
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe---CCCCceEEeccCcch
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL---DAEMVPRVADFGLAK 834 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl~~ 834 (973)
||||+ +++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 99999 8999999975433 589999999999999999999999 99999999999999 789999999999998
Q ss_pred hccccCCCcc---ccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC-CchhHHHHHHHHhcc
Q 039922 835 ALQSQEGQSD---DAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG-ENKDIVRWVTEATLS 910 (973)
Q Consensus 835 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~ 910 (973)
.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc
Confidence 7654432111 123346789999999999999999999999999999999999999976422 222233332222222
Q ss_pred CCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 911 SPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 911 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
.+... .. ......+.+++.+|++.||++||++.||++.|+..
T Consensus 237 ~~~~~--------~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 237 TPIEV--------LC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp SCHHH--------HT---------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred chhhh--------hh---------ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 11000 00 01135788999999999999999999999999874
No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-36 Score=341.55 Aligned_cols=270 Identities=19% Similarity=0.257 Sum_probs=191.7
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC----
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ---- 752 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 752 (973)
..+.++|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.+|+.+++.++||||+++++++...
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 456789999999999999999999875 789999999976555556677888999999999999999999998654
Q ss_pred --CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEecc
Q 039922 753 --DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADF 830 (973)
Q Consensus 753 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 830 (973)
...|+|||++ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp GCCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred cCCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 5679999999 6899988865 2589999999999999999999999 9999999999999999999999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATL 909 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 909 (973)
|+++..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||... +..+....+.....
T Consensus 177 G~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~l~~i~~~~g 247 (367)
T 2fst_X 177 GLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT--DHIDQLKLILRLVG 247 (367)
T ss_dssp ---------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHC
T ss_pred ccccccccc-------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhC
Confidence 999765322 234678999999999877 67899999999999999999999999753 22333333332221
Q ss_pred cCCCccccCcc-----cccccCCCCCCCCCH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 910 SSPERGCCRDL-----NQLIDPRMDLSTCDY-----EEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 910 ~~~~~~~~~~l-----~~~~d~~l~~~~~~~-----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.... .....+ ...+........... .....+.+++.+|++.||++|||+.|++++
T Consensus 248 ~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 248 TPGA-ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp SCCH-HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCH-HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 1100 000000 000000000000011 123568899999999999999999999876
No 228
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.6e-37 Score=329.43 Aligned_cols=251 Identities=26% Similarity=0.374 Sum_probs=198.6
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .....+.+.+|+..++.++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467899999999999999999987 799999999853211 12234578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999997653 488999999999999999999999 99999999999999999999999999997764
Q ss_pred ccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
... ......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||... ......+.+.......
T Consensus 163 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~----- 230 (276)
T 2h6d_A 163 DGE-----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIRGGVFYI----- 230 (276)
T ss_dssp C------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----
T ss_pred CCc-----ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCcccC-----
Confidence 322 1233568999999999987765 57999999999999999999999752 2333333333221110
Q ss_pred cCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 917 CRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 917 ~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+ ......+.+++.+|++.||++|||+.|++++
T Consensus 231 ---------~--------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ---------P--------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---------C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---------c--------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0113567899999999999999999999986
No 229
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=344.80 Aligned_cols=263 Identities=16% Similarity=0.166 Sum_probs=207.3
Q ss_pred CCCCccccccccCCeeEEEEEECC---------CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeee--------
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLKS---------GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVK-------- 744 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-------- 744 (973)
++|+..+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 679999999999999999999874 789999998533 34788999999999999887
Q ss_pred -------EEeEEec-CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCC
Q 039922 745 -------LLMCCSG-QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHN 816 (973)
Q Consensus 745 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 816 (973)
+++++.. ++..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 5677765 78889999999 999999998642 23589999999999999999999999 99999999999
Q ss_pred EEeCCCC--ceEEeccCcchhccccCCC---ccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCC
Q 039922 817 ILLDAEM--VPRVADFGLAKALQSQEGQ---SDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPND 891 (973)
Q Consensus 817 Ill~~~~--~~kl~DfGl~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~ 891 (973)
|+++.++ .+||+|||+++.+...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 9999999999876543321 1112234579999999999999999999999999999999999999998
Q ss_pred CCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 892 PSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
........+........... ..+.+..... ......+.+++.+|++.||++||++.||++.|++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKP---------GPFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSC---------CCEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHhccCCh---------hhhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 65434444444433322221 1111111100 01236788999999999999999999999999874
No 230
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=348.13 Aligned_cols=250 Identities=14% Similarity=0.142 Sum_probs=200.5
Q ss_pred cCCCCccccccccCCeeEEEEE------ECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC---CCCeeeEEeEEec
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVK------LKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVR---HGNVVKLLMCCSG 751 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 751 (973)
.++|...++||+|+||.||+|. ..+++.||+|++... ....+.+|++++++++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4568899999999999999994 447899999999432 2445777888888776 9999999999999
Q ss_pred CCeeEEEEeccCCCChhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC--------
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKG--RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA-------- 821 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-------- 821 (973)
++..|+||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 999999999999999999997532 233689999999999999999999999 9999999999999998
Q ss_pred ---CCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCch
Q 039922 822 ---EMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENK 898 (973)
Q Consensus 822 ---~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~ 898 (973)
++.+||+|||+++.+..... ........||++|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPK--GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCT--TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccCCEEEeeCchhhhhhccCC--CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 89999999999976543222 2234556799999999999999999999999999999999999999864321100
Q ss_pred hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHhh
Q 039922 899 DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINR-PSMRRVVELLRV 968 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~R-ps~~evl~~L~~ 968 (973)
. ++..+... .....+.+++..|++.+|.+| |++.++.+.|+.
T Consensus 294 --------------------~----~~~~~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 294 --------------------K----PEGLFRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp --------------------E----ECSCCTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred --------------------e----echhcccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 0 11111110 124566788889999999998 578888777765
No 231
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=344.54 Aligned_cols=279 Identities=25% Similarity=0.325 Sum_probs=197.2
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHH--HHHHHhcCCCCCeeeEEeEEec-----CC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRS--EIETLGRVRHGNVVKLLMCCSG-----QD 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~l~~~~~~-----~~ 753 (973)
.++|+..+.||+|+||.||+|+. +++.||||++... ....+.. |+..+..++|+||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 46789999999999999999987 5899999998422 2233444 4444556899999999985532 33
Q ss_pred eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCeEEeCCCCCCEEeCCCCceEE
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC------VPAIVHRDVKSHNILLDAEMVPRV 827 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~ivH~Dlkp~NIll~~~~~~kl 827 (973)
..++||||+++|+|.+++... ..++..+..++.||+.||+|||+.+ .++|+||||||+||+++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 678999999999999999764 3588999999999999999999873 238999999999999999999999
Q ss_pred eccCcchhccccCCC----ccccccccccccCccccccccC-------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC
Q 039922 828 ADFGLAKALQSQEGQ----SDDAMSCVAGSYGYIAPEYAYT-------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE 896 (973)
Q Consensus 828 ~DfGl~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~ 896 (973)
+|||+++.+...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999876543211 1122334579999999999876 45667899999999999999998887653221
Q ss_pred chhHHHHHHHHhccCCCccccC--cccccccCCCCC-CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 897 NKDIVRWVTEATLSSPERGCCR--DLNQLIDPRMDL-STCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~--~l~~~~d~~l~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
......+... ....+...... .......+.+.. ..........+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 242 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 242 PEYQMAFQTE-VGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCTTHHH-HCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHhhhcc-cCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 1100000000 00000000000 000000011110 1112345678999999999999999999999999998753
No 232
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=345.99 Aligned_cols=258 Identities=23% Similarity=0.281 Sum_probs=202.8
Q ss_pred cCCCCccccccccCCeeEEEEEE----CCCCEEEEEEecCCCC--CchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCC
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL----KSGETVAVKRLLGGTH--KPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQD 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 753 (973)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+.+|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46789999999999999999997 3789999999854321 112334567799999999 6999999999999999
Q ss_pred eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcc
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLA 833 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~ 833 (973)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997653 488999999999999999999999 9999999999999999999999999999
Q ss_pred hhccccCCCccccccccccccCccccccccC--CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYT--KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..............
T Consensus 207 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~ 282 (355)
T 1vzo_A 207 KEFVADET---ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSE 282 (355)
T ss_dssp EECCGGGG---GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHCC
T ss_pred eecccCCC---CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhccC
Confidence 76543221 12334579999999999985 35788999999999999999999999754221 11222221111110
Q ss_pred CCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHh
Q 039922 912 PERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP-----SMRRVVELLR 967 (973)
Q Consensus 912 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~L~ 967 (973)
++ ........+.+++.+|++.||++|| ++.|++++..
T Consensus 283 ~~-------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 283 PP-------------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp CC-------------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred CC-------------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 00 0011235678999999999999999 9999988753
No 233
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=336.54 Aligned_cols=265 Identities=28% Similarity=0.371 Sum_probs=206.6
Q ss_pred cCCCCccccccccCCeeEEEEEE-----CCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC--
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKL-----KSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD-- 753 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 753 (973)
.++|+..+.||+|+||.||+|+. .+|+.||+|++.. ......+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS--CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 34688899999999999999984 3688999999953 34455677999999999999999999999987644
Q ss_pred eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcc
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLA 833 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~ 833 (973)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 67999999999999999986532 589999999999999999999999 9999999999999999999999999999
Q ss_pred hhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC----------CchhHHHH
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG----------ENKDIVRW 903 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~----------~~~~~~~~ 903 (973)
......... ........++..|+|||++.+..++.++||||||+++|||++|..|+..... ........
T Consensus 193 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 193 KVLPQDKEY-YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp EECCSSCSE-EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhccccccc-cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 876543221 1112234567789999999988899999999999999999999998863200 00011111
Q ss_pred HHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 904 VTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
+........ ... ........+.+++.+|++.||++|||+.||++.|+++.
T Consensus 272 ~~~~~~~~~--------------~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 272 LIELLKNNG--------------RLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHTTC--------------CCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCC--------------CCC---CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111100 000 00122467889999999999999999999999998764
No 234
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-36 Score=336.89 Aligned_cols=261 Identities=21% Similarity=0.245 Sum_probs=202.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEec--CCeeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSG--QDFNI 756 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 756 (973)
.++|+..+.||+|+||.||+|+.. +++.||+|++.. ...+.+.+|++++++++ ||||+++++++.. ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 357899999999999999999874 789999999842 23466889999999997 9999999999987 66789
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC-ceEEeccCcchh
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM-VPRVADFGLAKA 835 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGl~~~ 835 (973)
+||||+++++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.
T Consensus 110 lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 99999999999998853 78889999999999999999999 999999999999999776 899999999986
Q ss_pred ccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHH-----------
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRW----------- 903 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~----------- 903 (973)
...... .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||.........+...
T Consensus 181 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~ 255 (330)
T 3nsz_A 181 YHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255 (330)
T ss_dssp CCTTCC-----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHH
T ss_pred cCCCCc-----cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhh
Confidence 643322 234578899999999877 678999999999999999999999997643332222221
Q ss_pred -HHHHhccCCCc-------cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 904 -VTEATLSSPER-------GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 904 -~~~~~~~~~~~-------~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+........+. .......+.... .........+.+++.+|+++||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHS-----ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHTTCCCCTHHHHHHCCCCCCCGGGGCCT-----TTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHhccccccchhhhhhhccccchhhhccc-----cccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11111110000 000000011110 0111235678999999999999999999999986
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.6e-37 Score=331.01 Aligned_cols=256 Identities=25% Similarity=0.330 Sum_probs=208.6
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
..+.++|+..+.||+|+||.||+|+.+ +++.||+|++..........+.+.+|++++++++||||+++++++...+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 456678999999999999999999986 7999999999655444455677899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC---CceEEeccCcc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE---MVPRVADFGLA 833 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGl~ 833 (973)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999999887643 489999999999999999999999 99999999999999764 47999999999
Q ss_pred hhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 834 KALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
........ .....|+..|+|||++.+ .++.++||||+|+++|+|++|..||... ...+....+.......+.
T Consensus 172 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~ 243 (287)
T 2wei_A 172 TCFQQNTK-----MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDL 243 (287)
T ss_dssp GTBCCCSS-----CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCS
T ss_pred eeecCCCc-----cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCc
Confidence 87643321 223468899999998865 5899999999999999999999999753 333333333332211100
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. .. ......+.+++.+|+++||++|||+.|++++
T Consensus 244 ~------------~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 244 P------------QW------RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp G------------GG------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h------------hh------hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0 00 1123568899999999999999999999985
No 236
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.4e-36 Score=344.89 Aligned_cols=201 Identities=23% Similarity=0.273 Sum_probs=173.5
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC------CCCCeeeEEeEEe
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV------RHGNVVKLLMCCS 750 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~ 750 (973)
+.+..+|+..++||+|+||.||+|... +++.||||++.. .......+.+|+.+++.+ .|+||+++++++.
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~ 169 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 169 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence 456678999999999999999999876 588999999943 233445677788887777 5679999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc--eEEe
Q 039922 751 GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV--PRVA 828 (973)
Q Consensus 751 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~ 828 (973)
..+..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEEC
T ss_pred cCCeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEe
Confidence 9999999999995 799999876532 3489999999999999999999999 9999999999999999887 9999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCC
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPS 893 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~ 893 (973)
|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 245 DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 245 DFGSSCYEHQR-------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCTTCEETTCC-------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecccceecCCc-------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99998654322 23357899999999999999999999999999999999999999753
No 237
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.5e-36 Score=331.59 Aligned_cols=257 Identities=25% Similarity=0.326 Sum_probs=206.9
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC-------chhHHHHHHHHHHHhcCC-CCCeeeEEeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK-------PETETVFRSEIETLGRVR-HGNVVKLLMC 748 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~~e~~~l~~l~-h~niv~l~~~ 748 (973)
....++|+..+.||+|+||.||+|+.+ +|+.||+|++...... ....+.+.+|+.++++++ ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 345678999999999999999999986 6899999999644311 123456788999999996 9999999999
Q ss_pred EecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEe
Q 039922 749 CSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVA 828 (973)
Q Consensus 749 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 828 (973)
+..++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 93 YETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eccCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999999997643 589999999999999999999999 99999999999999999999999
Q ss_pred ccCcchhccccCCCccccccccccccCcccccccc------CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHH
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAY------TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVR 902 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 902 (973)
|||.+....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||... .......
T Consensus 167 dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~ 239 (298)
T 1phk_A 167 DFGFSCQLDPGE-----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLR 239 (298)
T ss_dssp CCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHH
T ss_pred cccchhhcCCCc-----ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHH
Confidence 999997764332 123456899999999885 456889999999999999999999999753 2333333
Q ss_pred HHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 903 WVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+.......+. + ........+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~------------~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 MIMSGNYQFGS------------P------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHTCCCCCT------------T------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCCcccCc------------c------cccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 33332211100 0 001224578899999999999999999999864
No 238
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-36 Score=339.03 Aligned_cols=269 Identities=21% Similarity=0.250 Sum_probs=204.2
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee-
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN- 755 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~- 755 (973)
..+.++|...+.||+|+||.||+|... +|+.||+|++..........+.+.+|+.+++.++||||+++++++...+..
T Consensus 38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 117 (371)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred ecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence 456788999999999999999999876 789999999976655556677889999999999999999999999877654
Q ss_pred -----EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEecc
Q 039922 756 -----ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADF 830 (973)
Q Consensus 756 -----~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 830 (973)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred cceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999996 788887743 388999999999999999999999 9999999999999999999999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATL 909 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 909 (973)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||... +..+....+.....
T Consensus 189 g~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~ 259 (371)
T 4exu_A 189 GLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--DYLDQLTQILKVTG 259 (371)
T ss_dssp TCC---------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHC
T ss_pred CcccccccC-------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhC
Confidence 999765322 233578999999999887 68899999999999999999999999753 22222222222111
Q ss_pred cCCCccccCcc-----cccccCCCCCCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 910 SSPERGCCRDL-----NQLIDPRMDLSTCD-----YEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 910 ~~~~~~~~~~l-----~~~~d~~l~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.. ....+ ...+.......... ......+.+++.+|++.||++|||+.|++++
T Consensus 260 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 260 VPGTE-FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CCCHH-HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCcHH-HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 11000 00000 00000000000000 1124678999999999999999999999876
No 239
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7.9e-37 Score=334.42 Aligned_cols=255 Identities=24% Similarity=0.332 Sum_probs=200.5
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
+..++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 45568999999999999999999987 6899999998533 33445678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999999876433 589999999999999999999999 99999999999999999999999999976542
Q ss_pred ccCCCccccccccccccCccccccc-----cCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYA-----YTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
... .......||..|+|||++ .+..++.++||||||+++|||++|+.||... ........+.... .
T Consensus 169 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~---~ 239 (302)
T 2j7t_A 169 KTL----QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSD---P 239 (302)
T ss_dssp HHH----HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSC---C
T ss_pred ccc----cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHhccC---C
Confidence 221 112235689999999988 4667889999999999999999999999753 2222222111111 1
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+. .. ........+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~--------~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 240 PT--------LL--------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CC--------CS--------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred cc--------cC--------CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 00 001123568899999999999999999999875
No 240
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.1e-37 Score=336.85 Aligned_cols=267 Identities=26% Similarity=0.365 Sum_probs=187.1
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 467899999999999999999865 789999998853322 234566889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 760 EYMPNGSLADMLHEK-----GRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 760 e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
||+++++|.+++... .....+++..+..++.||+.||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998642 1233589999999999999999999999 99999999999999999999999999998
Q ss_pred hccccCCCc-cccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 835 ALQSQEGQS-DDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 835 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
......... ........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.... ................
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP--PMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC--GGGHHHHHHTSSCCCT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc--hhhHHHHHhccCCCcc
Confidence 765432111 112234578999999999875 568999999999999999999999997632 2222211111111100
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. ....++... ......+.+++.+|++.||++||++.|++++
T Consensus 248 ~-------~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 E-------TGVQDKEML-----KKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp T-------C-----CCC-----CCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-------cccccchhh-----hhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 001111111 1123568899999999999999999999875
No 241
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.7e-37 Score=340.05 Aligned_cols=256 Identities=23% Similarity=0.289 Sum_probs=198.5
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHH-HhcCCCCCeeeEEeEEecCCeeEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIET-LGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
..++|+..+.||+|+||.||+|+.. +|+.||||++........ ...+..|... ++.++||||+++++++..++..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3567888999999999999999975 789999999965544333 3444445544 788899999999999999999999
Q ss_pred EEeccCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 758 VYEYMPNGSLADMLHEKG-RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
||||++ |+|.+++.... ....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999997 59988886421 2336899999999999999999999742 8999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCcccccccc----CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAY----TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+...+.. ...
T Consensus 205 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~-- 276 (340)
T 3an0_A 205 VDSV-----AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE-PSP-- 276 (340)
T ss_dssp SCHH-----HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS-CCC--
T ss_pred cccc-----ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcC-CCC--
Confidence 4321 122346899999999964 3478899999999999999999999997532222222221111 100
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. ... ......+.+++.+|++.||++||++.|++++
T Consensus 277 -~--------~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 277 -Q--------LPA---------DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -C--------CCG---------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -C--------CCc---------ccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 000 1123568899999999999999999999874
No 242
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.1e-37 Score=349.84 Aligned_cols=246 Identities=14% Similarity=0.119 Sum_probs=190.9
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHH---HHHhcCCCCCeeeEE-------e
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEI---ETLGRVRHGNVVKLL-------M 747 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~ 747 (973)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|+ +.+++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 3467889999999999999999974 79999999996442 3344567789999 555566899999998 6
Q ss_pred EEecCC-----------------eeEEEEeccCCCChhhhhhccCCC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 039922 748 CCSGQD-----------------FNILVYEYMPNGSLADMLHEKGRS----GSLDWSIRFSIAQGAAKGLAYLHNDCVPA 806 (973)
Q Consensus 748 ~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 806 (973)
++...+ ..|+||||+ +|+|.+++...... ..+++..++.|+.||+.||+|||+. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 68999999764321 1244688889999999999999999 9
Q ss_pred eEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCC-----------CCCCCCChhh
Q 039922 807 IVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-----------KVTEKSDVYS 875 (973)
Q Consensus 807 ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s 875 (973)
|+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC-------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC-------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 99999999999999999999999999975322 2234567 999999999887 8999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCC
Q 039922 876 FGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPIN 955 (973)
Q Consensus 876 lG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~ 955 (973)
|||++|||++|+.||....... ....+... . ......+.+++.+|+++||++
T Consensus 299 lG~il~elltg~~Pf~~~~~~~---------------------~~~~~~~~-~------~~~~~~~~~li~~~L~~dp~~ 350 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALG---------------------GSEWIFRS-C------KNIPQPVRALLEGFLRYPKED 350 (377)
T ss_dssp HHHHHHHHHHSSCCC------C---------------------CSGGGGSS-C------CCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHHHHHHCCCCCccccccc---------------------chhhhhhh-c------cCCCHHHHHHHHHHcCCCchh
Confidence 9999999999999996432110 00011110 0 011356889999999999999
Q ss_pred CCCHHHHHHH
Q 039922 956 RPSMRRVVEL 965 (973)
Q Consensus 956 Rps~~evl~~ 965 (973)
|||+.|++++
T Consensus 351 Rpt~~e~l~h 360 (377)
T 3byv_A 351 RLLPLQAMET 360 (377)
T ss_dssp CCCHHHHHTS
T ss_pred CCCHHHHhhC
Confidence 9999999864
No 243
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=329.62 Aligned_cols=256 Identities=25% Similarity=0.312 Sum_probs=200.3
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC--CCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe--cCCe
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT--HKPETETVFRSEIETLGRVRHGNVVKLLMCCS--GQDF 754 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 754 (973)
+.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+.+|+.++++++|+||+++++++. +.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999985 78999999985331 11234567899999999999999999999984 4567
Q ss_pred eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 755 NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.++||||++++ +.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999765 777776543 33689999999999999999999999 99999999999999999999999999998
Q ss_pred hccccCCCccccccccccccCccccccccCCC--CCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 835 ALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKK--VTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 835 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....... ........||..|+|||+..+.. ++.++||||+|+++|||++|+.||... ......+.+.......
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~~- 232 (305)
T 2wtk_C 158 ALHPFAA--DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--NIYKLFENIGKGSYAI- 232 (305)
T ss_dssp ECCTTCS--SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCCCC-
T ss_pred ccCcccc--ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHhcCCCCC-
Confidence 7643322 12233456899999999987644 377999999999999999999999752 2233333332221110
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
. ......+.+++.+|++.||++|||+.|++++-
T Consensus 233 ----------------~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 233 ----------------P-----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp ----------------C-----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred ----------------C-----CccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 0 01235678999999999999999999999863
No 244
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.4e-37 Score=368.01 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=205.8
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
.++|+..++||+|+||.||+|+.+ +++.||||++.+... .....+.+..|..++..+ +|++|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 467889999999999999999976 688999999854311 122345677899999987 69999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++...
T Consensus 420 V~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 999999999999998754 489999999999999999999999 99999999999999999999999999997543
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..++.+.+.......
T Consensus 494 ~~~----~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~~~~------ 561 (674)
T 3pfq_A 494 WDG----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEHNVAY------ 561 (674)
T ss_dssp CTT----CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHSSCCCC------
T ss_pred cCC----cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCCCC------
Confidence 222 2234567999999999999999999999999999999999999999753 3333443333221110
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSM-----RRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~evl~~ 965 (973)
......++.+++.+|+++||++||++ .||+++
T Consensus 562 ----------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 562 ----------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ----------------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ----------------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 01123568899999999999999997 777654
No 245
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=332.19 Aligned_cols=253 Identities=24% Similarity=0.307 Sum_probs=199.5
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 757 (973)
...++|+..+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34567889999999999999999986 68999999995432 23568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcc
Q 039922 758 VYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQ 837 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~ 837 (973)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999987433 2589999999999999999999999 99999999999999999999999999997664
Q ss_pred ccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCcccc
Q 039922 838 SQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCC 917 (973)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (973)
.... ......|+..|+|||++.+..++.++||||||+++|||++|+.||... ........+...... .
T Consensus 177 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~---~--- 244 (314)
T 3com_A 177 DTMA----KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI--HPMRAIFMIPTNPPP---T--- 244 (314)
T ss_dssp TTBS----CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC---C---
T ss_pred hhcc----ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCCc---c---
Confidence 3321 123456899999999999999999999999999999999999999753 111111111111100 0
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 918 RDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 918 ~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+. ........+.+++.+|++.||++|||+.|++++
T Consensus 245 ----------~~---~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 245 ----------FR---KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----------CS---SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----------cC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00 001123568899999999999999999999874
No 246
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.9e-37 Score=334.16 Aligned_cols=262 Identities=26% Similarity=0.378 Sum_probs=198.6
Q ss_pred cCCCCccccccccCCeeEEEEEEC--CCC--EEEEEEecCCCC-CchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCee
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK--SGE--TVAVKRLLGGTH-KPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFN 755 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 755 (973)
.++|+..+.||+|+||.||+|++. +++ .||+|++..... .....+.+.+|++++++++||||+++++++..++ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357889999999999999999864 333 689998854432 3345677899999999999999999999998765 8
Q ss_pred EEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 756 ILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 756 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997643 2588999999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCc
Q 039922 836 LQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPER 914 (973)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
....... ........+|..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+.......+
T Consensus 171 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~-- 245 (291)
T 1u46_A 171 LPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKEGERLP-- 245 (291)
T ss_dssp CCC-CCE-EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTSCCCCC--
T ss_pred ccccccc-hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC--CHHHHHHHHHccCCCCC--
Confidence 6543321 112233457788999999998889999999999999999999 99999753 22333332222111100
Q ss_pred cccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 915 GCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 915 ~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
........+.+++.+|++.||++||++.+++++|++...
T Consensus 246 ------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 246 ------------------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ------------------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 001224678899999999999999999999999987543
No 247
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.1e-37 Score=338.46 Aligned_cols=256 Identities=23% Similarity=0.301 Sum_probs=199.8
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC------CchhHHHHHHHHHHHhcCCCCCeeeEEeEEec
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH------KPETETVFRSEIETLGRVRHGNVVKLLMCCSG 751 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 751 (973)
.+.++|+..+.||+|+||.||+|+.. +++.||||++..... .......+.+|++++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 44567899999999999999999976 688999999854321 11223457899999999999999999999976
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc---eEEe
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV---PRVA 828 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 828 (973)
++ .|+||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred Cc-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 65 799999999999999887543 589999999999999999999999 9999999999999987654 9999
Q ss_pred ccCcchhccccCCCccccccccccccCcccccccc---CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHH
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAY---TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVT 905 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~ 905 (973)
|||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|..||.... ....+...+.
T Consensus 160 Dfg~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~ 233 (322)
T 2ycf_A 160 DFGHSKILGET-----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQIT 233 (322)
T ss_dssp CCTTCEECCCC-----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT-CSSCHHHHHH
T ss_pred cCccceecccc-----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-hHHHHHHHHH
Confidence 99999765322 1123456899999999874 5678899999999999999999999997542 2223344433
Q ss_pred HHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 906 EATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 906 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.......+ +.. ......+.+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~--------~~~----------~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 SGKYNFIP--------EVW----------AEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HTCCCCCH--------HHH----------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hCccccCc--------hhh----------hhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 32211000 000 0123578899999999999999999999864
No 248
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-36 Score=334.20 Aligned_cols=255 Identities=24% Similarity=0.310 Sum_probs=198.8
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC--CCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVR--HGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|+..+++.||+|++..........+.+.+|++++++++ |+||+++++++..++..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4569999999999999999999989999999999765555566778999999999997 59999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|| +.+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++ +.+||+|||+++....
T Consensus 107 ~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred Ee-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 99 55789999998643 588999999999999999999999 9999999999999964 8999999999987644
Q ss_pred cCCCccccccccccccCccccccccC-----------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHH
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYT-----------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 907 (973)
.... .......|++.|+|||++.+ ..++.++||||||+++|||++|+.||............ .
T Consensus 179 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~----~ 252 (313)
T 3cek_A 179 DTTS--VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA----I 252 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH----H
T ss_pred cccc--ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH----H
Confidence 3221 11234568999999999875 46788999999999999999999999753322111111 1
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
...... ..+. ......+.+++.+|++.||++||++.|++++-
T Consensus 253 ~~~~~~------------~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 253 IDPNHE------------IEFP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HCTTSC------------CCCC-----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred Hhcccc------------cCCc-----ccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 111000 0000 01135688999999999999999999998764
No 249
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=338.57 Aligned_cols=257 Identities=24% Similarity=0.313 Sum_probs=187.1
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEe--------c
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCS--------G 751 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~ 751 (973)
.+|+..++||+|+||.||+|++. +|+.||+|++... .....+.+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 36888999999999999999975 7899999998432 3455667889999999996 999999999983 3
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEeCCCCCCEEeCCCCceEEec
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPA--IVHRDVKSHNILLDAEMVPRVAD 829 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~D 829 (973)
....++||||++ |+|.+++........+++..++.++.||+.||+|||+. + |+||||||+||++++++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 456799999995 89999987644445699999999999999999999999 8 99999999999999999999999
Q ss_pred cCcchhccccCCCcc--------ccccccccccCccccccc---cCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCch
Q 039922 830 FGLAKALQSQEGQSD--------DAMSCVAGSYGYIAPEYA---YTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENK 898 (973)
Q Consensus 830 fGl~~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~ 898 (973)
||+++.......... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||..... .
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~ 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--L 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--H
Confidence 999987654322110 011234689999999998 566788999999999999999999999964211 1
Q ss_pred hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 899 DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
..+...... +. . ......+.+++.+|++.||++||++.|++++|+...
T Consensus 260 ---~~~~~~~~~-~~---------------~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 260 ---RIVNGKYSI-PP---------------H-----DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ---------CCC-CT---------------T-----CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HhhcCcccC-Cc---------------c-----cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111100 00 0 001134678999999999999999999999998753
No 250
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-35 Score=343.53 Aligned_cols=264 Identities=20% Similarity=0.250 Sum_probs=208.4
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCC-CCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRH-GNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~ 756 (973)
.+.++|++.++||+|+||.||+|++. +++.||||++...... ..+.+|+++++.++| +++..+..++...+..+
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 34578999999999999999999974 7999999988544322 237789999999987 56666667777888999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe---CCCCceEEeccCcc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL---DAEMVPRVADFGLA 833 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGl~ 833 (973)
+||||+ +++|.+++..... .+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 8999999975433 589999999999999999999999 99999999999999 58899999999999
Q ss_pred hhccccCCCc---cccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCC-CchhHHHHHHHHhc
Q 039922 834 KALQSQEGQS---DDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFG-ENKDIVRWVTEATL 909 (973)
Q Consensus 834 ~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~ 909 (973)
+.+....... ........||..|+|||++.+..++.++|||||||++|||++|+.||..... ........+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc
Confidence 8765443221 1122356799999999999999999999999999999999999999976432 22223333322222
Q ss_pred cCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 910 SSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 910 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
... ...+.. ....++.+++..|++.+|++||++.+|++.|+..
T Consensus 234 ~~~-------~~~l~~----------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 234 ATS-------IEALCR----------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HSC-------HHHHHT----------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-------HHHHhc----------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 100 000000 1135789999999999999999999999999874
No 251
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2e-36 Score=335.07 Aligned_cols=274 Identities=24% Similarity=0.284 Sum_probs=204.5
Q ss_pred ccCCCCccccccccCCeeEEEEEEC--CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC---CCCCeeeEEeEEe----
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK--SGETVAVKRLLGGTHKPETETVFRSEIETLGRV---RHGNVVKLLMCCS---- 750 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 750 (973)
..++|+..+.||+|+||.||+|+.. +|+.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3467999999999999999999983 688999999864333222223455677766665 8999999999987
Q ss_pred -cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEec
Q 039922 751 -GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVAD 829 (973)
Q Consensus 751 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 829 (973)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 5667899999997 799999976532 2488999999999999999999999 999999999999999999999999
Q ss_pred cCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhc
Q 039922 830 FGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATL 909 (973)
Q Consensus 830 fGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 909 (973)
||+++...... ......||..|+|||++.+..++.++||||||+++|||++|+.||... ...+....+.....
T Consensus 164 fg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~ 236 (326)
T 1blx_A 164 FGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS--SDVDQLGKILDVIG 236 (326)
T ss_dssp CCSCCCCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHC
T ss_pred CcccccccCCC-----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHHHcC
Confidence 99997654321 233467899999999999999999999999999999999999999753 23333333333222
Q ss_pred cCCCccccCccc---cccc-C-CCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 910 SSPERGCCRDLN---QLID-P-RMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 910 ~~~~~~~~~~l~---~~~d-~-~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.......+.... ..+. . ..............+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 211111110000 0000 0 000001112234678899999999999999999999875
No 252
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2e-36 Score=338.35 Aligned_cols=273 Identities=17% Similarity=0.281 Sum_probs=209.3
Q ss_pred ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCc---------------hhHHHHHHHHHHHhcCCCCCe
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKP---------------ETETVFRSEIETLGRVRHGNV 742 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------~~~~~~~~e~~~l~~l~h~ni 742 (973)
....++|+..+.||+|+||.||+|+. +|+.||+|++....... ...+.+.+|+.++++++||||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 44567899999999999999999999 89999999985332111 112678999999999999999
Q ss_pred eeEEeEEecCCeeEEEEeccCCCChhhh------hhccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEeCCCCC
Q 039922 743 VKLLMCCSGQDFNILVYEYMPNGSLADM------LHEKGRSGSLDWSIRFSIAQGAAKGLAYLHN-DCVPAIVHRDVKSH 815 (973)
Q Consensus 743 v~l~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivH~Dlkp~ 815 (973)
+++++++...+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ . +|+||||||+
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~ 181 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPS 181 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGG
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChH
Confidence 9999999999999999999999999998 5432 13468999999999999999999999 8 9999999999
Q ss_pred CEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCC-CCCC-CCChhhHHHHHHHHHcCCCCCCCC
Q 039922 816 NILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTE-KSDVYSFGVVLMELVTGKRPNDPS 893 (973)
Q Consensus 816 NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~elltg~~p~~~~ 893 (973)
||+++.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++||||+|+++|||++|+.||...
T Consensus 182 Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 182 NILMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp GEEECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hEEEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999765432 23345789999999999877 5666 999999999999999999999764
Q ss_pred CCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 894 FGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. ..+..+.+.......+.. ............. ..........+.+++.+|++.||++|||+.|++++
T Consensus 256 ~~-~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 256 IS-LVELFNNIRTKNIEYPLD-RNHFLYPLTNKKS--TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp SC-SHHHHHHHTSCCCCCCCS-SSSSTTTTCC----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred Cc-HHHHHHHHhccCcCCccc-hhhhhcccccccc--ccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22 234444433322221110 0000000000000 00012234678999999999999999999999875
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=335.84 Aligned_cols=260 Identities=22% Similarity=0.339 Sum_probs=198.9
Q ss_pred ecccc-ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEE
Q 039922 673 VSFNE-DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCC 749 (973)
Q Consensus 673 ~~~~~-~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 749 (973)
+.+.+ ....++|+..+.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|+.+++++ +||||+++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 33444 456788999999999999999999985 78999999985432 2345688999999998 799999999999
Q ss_pred ec------CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC
Q 039922 750 SG------QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM 823 (973)
Q Consensus 750 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 823 (973)
.. .+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~ 166 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENA 166 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCC
Confidence 76 568899999999999999997642 23588999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCcccccccc-----CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCch
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAY-----TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENK 898 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~ 898 (973)
.+||+|||++........ ......|+..|+|||++. +..++.++|||||||++|||++|+.||... ...
T Consensus 167 ~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~ 240 (326)
T 2x7f_A 167 EVKLVDFGVSAQLDRTVG----RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM--HPM 240 (326)
T ss_dssp CEEECCCTTTC-----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS--CHH
T ss_pred CEEEeeCcCceecCcCcc----ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC--cHH
Confidence 999999999876643221 123356899999999987 567889999999999999999999999653 122
Q ss_pred hHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 899 DIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.....+...... .... ......+.+++.+|++.||++||++.|++++
T Consensus 241 ~~~~~~~~~~~~-----------~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 RALFLIPRNPAP-----------RLKS---------KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHHSCCC-----------CCSC---------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhcCccc-----------cCCc---------cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 222222111100 0000 1113578899999999999999999999875
No 254
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.1e-36 Score=334.51 Aligned_cols=271 Identities=21% Similarity=0.259 Sum_probs=207.5
Q ss_pred ccccCCCCccccccccCCeeEEEEEE-C-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCC------CeeeEEeEE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKL-K-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHG------NVVKLLMCC 749 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~ 749 (973)
+.+.++|++.+.||+|+||.||+|.. + +++.||+|++.. .....+.+.+|+.+++.++|+ +++++++++
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred CCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 34567899999999999999999987 3 688999999942 234456788899999988765 499999999
Q ss_pred ecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC--------
Q 039922 750 SGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA-------- 821 (973)
Q Consensus 750 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-------- 821 (973)
...+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccC
Confidence 9999999999999 8999999976532 3588999999999999999999999 9999999999999987
Q ss_pred -----------CCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCC
Q 039922 822 -----------EMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPN 890 (973)
Q Consensus 822 -----------~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~ 890 (973)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 234 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEH-------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSC-------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CccccccccccCCCceEeeCcccccCccc-------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 668999999998764322 22357899999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHhccCCCcccc-------------Cc---------ccccccCCCCCCCCCHHHHHHHHHHHHhc
Q 039922 891 DPSFGENKDIVRWVTEATLSSPERGCC-------------RD---------LNQLIDPRMDLSTCDYEEAEKVLNVALMC 948 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~---------l~~~~d~~l~~~~~~~~~~~~l~~l~~~c 948 (973)
... +..+....+.......+..... .+ ..+...+..............+.+++.+|
T Consensus 235 ~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 312 (339)
T 1z57_A 235 PTH--DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKM 312 (339)
T ss_dssp CCS--CHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHH
T ss_pred CCC--ChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHH
Confidence 753 2222222222222111110000 00 00000000001112235567899999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 039922 949 TSDFPINRPSMRRVVEL 965 (973)
Q Consensus 949 l~~dP~~Rps~~evl~~ 965 (973)
++.||++|||+.|++++
T Consensus 313 L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 313 LEYDPAKRITLREALKH 329 (339)
T ss_dssp TCSSTTTSCCHHHHTTS
T ss_pred hCcCcccccCHHHHhcC
Confidence 99999999999999876
No 255
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=339.42 Aligned_cols=261 Identities=22% Similarity=0.341 Sum_probs=202.1
Q ss_pred ccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
..++|+..+.||+|+||.||+|+... .||+|++..........+.+.+|+.++++++|+||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678999999999999999998863 5999998655444444456788999999999999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhcccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQ 839 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~ 839 (973)
||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++ ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp BCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred ecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 9999999999997643 2588999999999999999999999 999999999999998 679999999998765322
Q ss_pred CCC-ccccccccccccCccccccccC---------CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhc
Q 039922 840 EGQ-SDDAMSCVAGSYGYIAPEYAYT---------KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATL 909 (973)
Q Consensus 840 ~~~-~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .........|+..|+|||++.+ ..++.++||||||+++|||++|+.||... ........+.....
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~ 260 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAIIWQMGTGMK 260 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--CHHHHHHHHHTTCC
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHhccCCC
Confidence 111 1122334568999999999874 35788999999999999999999999753 22222222222111
Q ss_pred cCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhcc
Q 039922 910 SSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDK 970 (973)
Q Consensus 910 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 970 (973)
.. .... .....+.+++.+|++.||++|||+.|+++.|+...
T Consensus 261 ~~-----------~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 261 PN-----------LSQI---------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp CC-----------CCCS---------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred CC-----------CCcC---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 10 0000 11235789999999999999999999999998854
No 256
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-36 Score=342.94 Aligned_cols=269 Identities=23% Similarity=0.276 Sum_probs=195.2
Q ss_pred ccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCC------
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQD------ 753 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 753 (973)
...+|+..++||+|+||.||+|+...+..||+|++...... ..+|+++++.++||||+++++++...+
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 34578999999999999999999987778999998543321 236999999999999999999985433
Q ss_pred eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC-CCCceEEeccCc
Q 039922 754 FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD-AEMVPRVADFGL 832 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGl 832 (973)
..++||||++++.+............+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999997644433332222233689999999999999999999999 999999999999999 799999999999
Q ss_pred chhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ....+...+.... ..
T Consensus 189 a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g-~p 261 (394)
T 4e7w_A 189 AKILIAGEP-----NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES-GIDQLVEIIKVLG-TP 261 (394)
T ss_dssp CEECCTTCC-----CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHC-CC
T ss_pred cccccCCCC-----CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhC-CC
Confidence 987643322 2345789999999998764 58999999999999999999999997532 1222222222111 00
Q ss_pred CCcc----ccCcccccccCCCCCCC----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 912 PERG----CCRDLNQLIDPRMDLST----CDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 912 ~~~~----~~~~l~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.... .+......+ +...... ........+.+++.+|+++||++|||+.|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 262 SREQIKTMNPNYMEHKF-PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CHHHHHHHCGGGSSSCC-CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CHHHHHhhChhhhhhcc-ccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000 000000000 0000000 001134578999999999999999999999986
No 257
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.7e-36 Score=338.23 Aligned_cols=269 Identities=20% Similarity=0.243 Sum_probs=195.8
Q ss_pred ccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec-------
Q 039922 680 ILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG------- 751 (973)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 751 (973)
..++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3467999999999999999999875 7999999998543221 2369999999999999999999843
Q ss_pred -------------------------------CCeeEEEEeccCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHH
Q 039922 752 -------------------------------QDFNILVYEYMPNGSLADMLHEK-GRSGSLDWSIRFSIAQGAAKGLAYL 799 (973)
Q Consensus 752 -------------------------------~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yL 799 (973)
....++||||++ |+|.+.+... .....+++..+..++.||+.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334789999997 6887777542 1233689999999999999999999
Q ss_pred hhcCCCCeEEeCCCCCCEEeC-CCCceEEeccCcchhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHH
Q 039922 800 HNDCVPAIVHRDVKSHNILLD-AEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFG 877 (973)
Q Consensus 800 H~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG 877 (973)
|+. +|+||||||+||+++ +++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+|
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-----SVAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-----CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-----CcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 999 999999999999997 689999999999987643322 2345789999999998765 489999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc---cCcccccccCCCCCCC----CCHHHHHHHHHHHHhccC
Q 039922 878 VVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC---CRDLNQLIDPRMDLST----CDYEEAEKVLNVALMCTS 950 (973)
Q Consensus 878 ~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~ 950 (973)
|++|||++|+.||.... ....+...+.... ....... .....+..-+...... ........+.+++.+|++
T Consensus 230 ~il~ell~g~~pf~~~~-~~~~~~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 230 CVFGELILGKPLFSGET-SIDQLVRIIQIMG-TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp HHHHHHHHSSCSSCCSS-HHHHHHHHHHHHC-CCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCCCC-hHHHHHHHHHHhC-CCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence 99999999999997532 2222222222111 1000000 0000000001110000 001124568899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 039922 951 DFPINRPSMRRVVEL 965 (973)
Q Consensus 951 ~dP~~Rps~~evl~~ 965 (973)
+||++|||+.|++++
T Consensus 308 ~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 308 YEPDLRINPYEAMAH 322 (383)
T ss_dssp SSGGGSCCHHHHHTS
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999865
No 258
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.6e-37 Score=345.60 Aligned_cols=255 Identities=11% Similarity=0.014 Sum_probs=182.3
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCC-CchhHHHHHHHH---HHHhcCCCCCeeeEE-------eEE
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH-KPETETVFRSEI---ETLGRVRHGNVVKLL-------MCC 749 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~ 749 (973)
..|+..+.||+|+||.||+|++. +|+.||+|++..... .....+.+.+|+ ..++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45888999999999999999976 789999999976543 234455677785 45555 699988755 444
Q ss_pred ecC-----------------CeeEEEEeccCCCChhhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCCC
Q 039922 750 SGQ-----------------DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIR------FSIAQGAAKGLAYLHNDCVPA 806 (973)
Q Consensus 750 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~ 806 (973)
... ...|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 332 34799999998 899999986432 2455555 78889999999999999 9
Q ss_pred eEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccC--CCCCCCCChhhHHHHHHHHH
Q 039922 807 IVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT--KKVTEKSDVYSFGVVLMELV 884 (973)
Q Consensus 807 ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~ell 884 (973)
|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell 287 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE-------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC-------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence 999999999999999999999999999865321 113456799999999987 67999999999999999999
Q ss_pred cCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039922 885 TGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVE 964 (973)
Q Consensus 885 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~ 964 (973)
+|+.||........... . . ..........+.... .......+.+++.+|+++||++|||+.|+++
T Consensus 288 tg~~Pf~~~~~~~~~~~--------~---~---~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 288 CLFLPFGLVTPGIKGSW--------K---R---PSLRVPGTDSLAFGS-CTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HSSCSTTBCCTTCTTCC--------C---B---CCTTSCCCCSCCCTT-SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred hCCCCCCCcCcccccch--------h---h---hhhhhccccccchhh-ccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99999976432211100 0 0 000000001111110 0123467889999999999999999999975
Q ss_pred H
Q 039922 965 L 965 (973)
Q Consensus 965 ~ 965 (973)
+
T Consensus 353 h 353 (371)
T 3q60_A 353 T 353 (371)
T ss_dssp S
T ss_pred C
Confidence 4
No 259
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=335.36 Aligned_cols=269 Identities=22% Similarity=0.265 Sum_probs=203.5
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe--
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF-- 754 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 754 (973)
..+.++|...+.||+|+||.||+|+.+ +|+.||||++..........+.+.+|+.+++.++||||+++++++...+.
T Consensus 20 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 99 (353)
T 3coi_A 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 99 (353)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc
Confidence 345678999999999999999999976 78999999997655555566788999999999999999999999987654
Q ss_pred ----eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEecc
Q 039922 755 ----NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADF 830 (973)
Q Consensus 755 ----~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 830 (973)
.|+||||++ ++|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 100 NFYDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp GCCCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred cceeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 499999996 688887743 388999999999999999999999 9999999999999999999999999
Q ss_pred CcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhc
Q 039922 831 GLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATL 909 (973)
Q Consensus 831 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 909 (973)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||... +..+....+.....
T Consensus 171 g~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~ 241 (353)
T 3coi_A 171 GLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--DYLDQLTQILKVTG 241 (353)
T ss_dssp TCTTC---------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS--CHHHHHHHHHHHHC
T ss_pred ccccCCCCC-------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhC
Confidence 999765322 223578999999999876 67899999999999999999999999753 22222222222111
Q ss_pred cCCCccccCcc---------ccccc-CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 910 SSPERGCCRDL---------NQLID-PRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 910 ~~~~~~~~~~l---------~~~~d-~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.. ....+ ..+.. +..............+.+++.+|++.||++|||+.|++++
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 242 VPGTE-FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp BCCHH-HHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCHH-HHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 10000 00000 00000 0000011112335678999999999999999999999876
No 260
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.8e-36 Score=346.34 Aligned_cols=259 Identities=24% Similarity=0.361 Sum_probs=190.6
Q ss_pred cccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 757 (973)
.+.+.|...++||+|+||+||.+...+|+.||||++.. ...+.+.+|+.+++++ +||||+++++++.+++..|+
T Consensus 12 ~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~-----~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 12 SLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG-----GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH-----HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 33445666789999999999877777899999999842 2345678899999876 89999999999999999999
Q ss_pred EEeccCCCChhhhhhccCCCCC----CCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC-----------
Q 039922 758 VYEYMPNGSLADMLHEKGRSGS----LDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE----------- 822 (973)
Q Consensus 758 v~e~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----------- 822 (973)
||||++ |+|.+++........ .++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 799999976542211 13345678999999999999999 99999999999999654
Q ss_pred --CceEEeccCcchhccccCCCccccccccccccCccccccccC-------CCCCCCCChhhHHHHHHHHHc-CCCCCCC
Q 039922 823 --MVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-------KKVTEKSDVYSFGVVLMELVT-GKRPNDP 892 (973)
Q Consensus 823 --~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~ellt-g~~p~~~ 892 (973)
+.+||+|||+++.................||+.|+|||++.+ ..++.++|||||||++|||++ |..||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 489999999998775443222222334679999999999875 678999999999999999999 8999965
Q ss_pred CCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 893 SFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..... .. +.......+ .. ..........++.+++.+|++.||++|||+.||+++
T Consensus 243 ~~~~~---~~-i~~~~~~~~------~~---------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 243 KYSRE---SN-IIRGIFSLD------EM---------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp TTTHH---HH-HHHTCCCCC------CC---------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred chhhH---HH-HhcCCCCcc------cc---------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 32211 11 111111100 00 011234567789999999999999999999999874
No 261
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-35 Score=333.63 Aligned_cols=276 Identities=21% Similarity=0.237 Sum_probs=205.7
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC-----
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ----- 752 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 752 (973)
++.++|+..+.||+|+||.||+|+.. +++.||+|++... ......+.+.+|++++++++||||+++++++...
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 34468999999999999999999876 7889999999532 2344456788999999999999999999998654
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCc
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGL 832 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 832 (973)
...|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 36799999996 6999988753 489999999999999999999999 999999999999999999999999999
Q ss_pred chhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
++........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||... ...+....+.......
T Consensus 175 a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~ 251 (364)
T 3qyz_A 175 ARVADPDHDH-TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK--HYLDQLNHILGILGSP 251 (364)
T ss_dssp CEECCGGGCB-CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS--SGGGHHHHHHHHHCSC
T ss_pred eEecCCCCCc-cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC--ChHHHHHHHHHHhCCC
Confidence 9876543321 112344679999999998654 45899999999999999999999999753 2333333332222111
Q ss_pred CCccccCc--------ccccccC-CCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 912 PERGCCRD--------LNQLIDP-RMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 912 ~~~~~~~~--------l~~~~d~-~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
........ ......+ ..............+.+++.+|+++||++|||+.|++++-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 10000000 0000000 0000000011235688999999999999999999998763
No 262
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.3e-36 Score=338.46 Aligned_cols=275 Identities=21% Similarity=0.185 Sum_probs=199.1
Q ss_pred ccccCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCC---------chhHHHHHHHHHHHhcCCCCCeeeEEeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHK---------PETETVFRSEIETLGRVRHGNVVKLLMC 748 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~l~~~ 748 (973)
..+.++|+..+.||+|+||.||+|...+|+.||||++...... ....+.+.+|++++++++||||++++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 4567889999999999999999999989999999998543221 1223678999999999999999999999
Q ss_pred Eec-----CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC
Q 039922 749 CSG-----QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM 823 (973)
Q Consensus 749 ~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 823 (973)
+.. ....|+||||++ |+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 171 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNN 171 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTC
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCC
Confidence 843 346799999997 78888887543 3589999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHH
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVR 902 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 902 (973)
.+||+|||+++....... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||... ...+...
T Consensus 172 ~~kl~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~ 244 (362)
T 3pg1_A 172 DITICDFNLAREDTADAN-----KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS--TFYNQLN 244 (362)
T ss_dssp CEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHH
T ss_pred CEEEEecCcccccccccc-----cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC--CHHHHHH
Confidence 999999999975433221 234578899999999876 67899999999999999999999999753 2222222
Q ss_pred HHHHHhccCCCccc----cCcccccccCCCCC-CC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 903 WVTEATLSSPERGC----CRDLNQLIDPRMDL-ST-----CDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 903 ~~~~~~~~~~~~~~----~~~l~~~~d~~l~~-~~-----~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.+............ .....+.+...... .. ........+.+++.+|++.||++|||+.|++++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 22222111110000 00000000000000 00 001124568899999999999999999999986
No 263
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=8.8e-36 Score=338.49 Aligned_cols=351 Identities=20% Similarity=0.159 Sum_probs=182.0
Q ss_pred cCCccCCCCCCCCc-cceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEE
Q 039922 48 LGDWVRTSQQSPCN-WTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVL 126 (973)
Q Consensus 48 ~~sw~~~~~~~~C~-w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L 126 (973)
+++|.. .++||. |.+..|.....++ +-.+. .......-..++++++|++++|.++ .+|...|..+++|++|
T Consensus 3 ~~~~~~--~~~C~~~~~~~~c~~~~~~i---~~~~~--~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L 74 (390)
T 3o6n_A 3 VKPRQP--EYKCIDSNLQYDCVFYDVHI---DMQTQ--DVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELL 74 (390)
T ss_dssp ----CC--EECBCC------EEEESCEE---CSSCC--CCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEE
T ss_pred cCCCCC--ccceehhhhhhccceeeeee---ecccc--cccccccccccCCceEEEecCCchh-hCChhHhcccccCcEE
Confidence 577864 456664 5555554332222 11111 1111112234567777777777765 4555555666666666
Q ss_pred ecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCC
Q 039922 127 ALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLK 206 (973)
Q Consensus 127 ~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 206 (973)
+|++|.+.+..+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|+++...+..|+++++|++|++++|.++
T Consensus 75 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~ 154 (390)
T 3o6n_A 75 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 154 (390)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccC
Confidence 66666665555556666666666666666666555555566666666666666666444444555555555555555543
Q ss_pred CCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhc
Q 039922 207 SSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESL 286 (973)
Q Consensus 207 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l 286 (973)
. ..|..++++++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 155 ~-------------------------~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~----- 201 (390)
T 3o6n_A 155 R-------------------------IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL----- 201 (390)
T ss_dssp B-------------------------CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----
T ss_pred c-------------------------cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----
Confidence 2 2233444555555555555555533 233444555555555555421
Q ss_pred cCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccce
Q 039922 287 SNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYF 366 (973)
Q Consensus 287 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 366 (973)
...++|+.|++++|.++.. |.. ..++|+.|++++|++++. ..+..+++|++|
T Consensus 202 ~~~~~L~~L~l~~n~l~~~------------------------~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 253 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVV------------------------RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEV 253 (390)
T ss_dssp ECCSSCSEEECCSSCCCEE------------------------ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred CCCCcceEEECCCCeeeec------------------------ccc--ccccccEEECCCCCCccc--HHHcCCCCccEE
Confidence 2223455555555544422 111 123444444444444422 234444444444
Q ss_pred eeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCccc
Q 039922 367 DVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFE 446 (973)
Q Consensus 367 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 446 (973)
++++|++++..|..+..+++|+.|++++|++.+ +|..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++
T Consensus 254 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~ 331 (390)
T 3o6n_A 254 DLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331 (390)
T ss_dssp ECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred ECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc
Confidence 444444444444444444444444444444442 3444556667777777777776 34555666777777777777776
Q ss_pred CCCCCCCCCCCCcceEeecCCcCCCC
Q 039922 447 GSISPSISNAPKLTGILINGNNFTGE 472 (973)
Q Consensus 447 ~~~~~~~~~~~~L~~L~L~~N~l~~~ 472 (973)
.. .+..+++|+.|++++|++.+.
T Consensus 332 ~~---~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 332 TL---KLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CC---CCCTTCCCSEEECCSSCEEHH
T ss_pred ee---CchhhccCCEEEcCCCCccch
Confidence 44 266677888888888888753
No 264
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.3e-35 Score=333.74 Aligned_cols=273 Identities=22% Similarity=0.233 Sum_probs=206.3
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CC-----CeeeEEeEEe
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HG-----NVVKLLMCCS 750 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~ 750 (973)
+.+.++|+..+.||+|+||+||+|+.. +++.||||++.. .......+.+|+.+++.++ |+ +|+++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 556789999999999999999999876 688999999942 2334556778888888875 44 4999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC--CCCceEEe
Q 039922 751 GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD--AEMVPRVA 828 (973)
Q Consensus 751 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~ 828 (973)
..+..|+||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 9999999999995 699999976532 3589999999999999999999952 11899999999999995 47889999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+....
T Consensus 204 DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~--~~~~~~~~i~~~~ 274 (382)
T 2vx3_A 204 DFGSSCQLGQR-------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA--NEVDQMNKIVEVL 274 (382)
T ss_dssp CCTTCEETTCC-------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHH
T ss_pred eccCceecccc-------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHh
Confidence 99999866322 23357899999999999999999999999999999999999999753 3333333333322
Q ss_pred ccCCCcccc--Cc----cccccc-----------------C-------------------CCCCCCCCHHHHHHHHHHHH
Q 039922 909 LSSPERGCC--RD----LNQLID-----------------P-------------------RMDLSTCDYEEAEKVLNVAL 946 (973)
Q Consensus 909 ~~~~~~~~~--~~----l~~~~d-----------------~-------------------~l~~~~~~~~~~~~l~~l~~ 946 (973)
...+..... .. +.++.+ + ..........+...+.+++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 354 (382)
T 2vx3_A 275 GIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLIL 354 (382)
T ss_dssp CSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHH
Confidence 111100000 00 000000 0 00011122345568999999
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 039922 947 MCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 947 ~cl~~dP~~Rps~~evl~~ 965 (973)
+|+++||++|||+.|++++
T Consensus 355 ~mL~~dP~~Rpta~e~L~h 373 (382)
T 2vx3_A 355 RMLDYDPKTRIQPYYALQH 373 (382)
T ss_dssp HHTCSCTTTSCCHHHHTTS
T ss_pred HhcCCChhhCCCHHHHhcC
Confidence 9999999999999999875
No 265
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=8.3e-36 Score=340.91 Aligned_cols=269 Identities=25% Similarity=0.315 Sum_probs=194.5
Q ss_pred CCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC------Ce
Q 039922 682 PHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ------DF 754 (973)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 754 (973)
.+|+..+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++|+|||++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 36888999999999999999986 699999999854321 234699999999999999999988531 23
Q ss_pred eEEEEeccCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCC-CceEEeccCc
Q 039922 755 NILVYEYMPNGSLADMLHEK-GRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAE-MVPRVADFGL 832 (973)
Q Consensus 755 ~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGl 832 (973)
.++||||+++ ++.+.+... .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 5799999974 666655431 1223689999999999999999999999 99999999999999965 5689999999
Q ss_pred chhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 833 AKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
++.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.... ....+.+.+.......
T Consensus 204 a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-~~~~l~~i~~~lg~p~ 277 (420)
T 1j1b_A 204 AKQLVRGEP-----NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPT 277 (420)
T ss_dssp CEECCTTCC-----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCC
T ss_pred hhhcccCCC-----ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCC
Confidence 987643322 2345789999999998764 78999999999999999999999997532 2223333332211000
Q ss_pred CC--ccccCcccccccCCCCCCC----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 912 PE--RGCCRDLNQLIDPRMDLST----CDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 912 ~~--~~~~~~l~~~~d~~l~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.. ........+..-+.+.... .......++.+++.+|+++||++||++.|+++|-
T Consensus 278 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 00 0000000111111111100 0112246789999999999999999999998763
No 266
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.3e-36 Score=329.58 Aligned_cols=255 Identities=24% Similarity=0.401 Sum_probs=192.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec--------
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG-------- 751 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 751 (973)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 456888999999999999999975 799999999842 23455678899999999999999999998754
Q ss_pred -----CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceE
Q 039922 752 -----QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPR 826 (973)
Q Consensus 752 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 826 (973)
.+..|+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 456799999999999999998643 2578889999999999999999999 999999999999999999999
Q ss_pred EeccCcchhccccCCC----------ccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCC
Q 039922 827 VADFGLAKALQSQEGQ----------SDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFG 895 (973)
Q Consensus 827 l~DfGl~~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~ 895 (973)
|+|||.+......... .........|+..|+|||++.+. .++.++||||+||++|||++ ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 9999999766432110 01123345689999999998764 68999999999999999998 554211
Q ss_pred CchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 896 ENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
+.......+...... +.+. ........+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~-------------~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 ERVNILKKLRSVSIE-------------FPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHHHSTTCC-------------CCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhccccccc-------------cCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111112211111111 0001 112234567899999999999999999999985
No 267
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.9e-36 Score=358.42 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=205.0
Q ss_pred cCCCCccccccccCCeeEEEEEEC----CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK----SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
.++|+..+.||+|+||.||+|++. .+..||+|++... ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 456888999999999999999875 2457999988533 23445577899999999999999999999985 45689
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 467 lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 9999999999999997643 2589999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCCCcc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSPERG 915 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
..... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||... ...+....+........+
T Consensus 542 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~~~~-- 614 (656)
T 2j0j_A 542 EDSTY---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERLPMP-- 614 (656)
T ss_dssp CC-------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCCCCCC--
T ss_pred CCCcc---eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCCCCC--
Confidence 43321 11223456789999999998999999999999999999997 88898753 333444444433211110
Q ss_pred ccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhc
Q 039922 916 CCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVD 969 (973)
Q Consensus 916 ~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 969 (973)
......+.+++.+|++.||++||++.|+++.|+.+
T Consensus 615 -------------------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 615 -------------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp -------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11235688999999999999999999999999875
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.9e-36 Score=334.24 Aligned_cols=276 Identities=20% Similarity=0.248 Sum_probs=203.6
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecC-----
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQ----- 752 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 752 (973)
.+.++|+..+.||+|+||.||+|+.. +|+.||||++... ........+.+|++++++++||||+++++++...
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 45678999999999999999999986 6899999999532 3344556788999999999999999999987654
Q ss_pred CeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCc
Q 039922 753 DFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGL 832 (973)
Q Consensus 753 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 832 (973)
...++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999996 7999988753 489999999999999999999999 999999999999999999999999999
Q ss_pred chhccccCCCcc------ccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHH
Q 039922 833 AKALQSQEGQSD------DAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVT 905 (973)
Q Consensus 833 ~~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~ 905 (973)
++.......... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||... +..+....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~ 236 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR--DYRHQLLLIF 236 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC--CcHHHHHHHH
Confidence 987653321111 11234578999999998764 67899999999999999999999999753 2222222222
Q ss_pred HHhccCCCccccCc-----ccccccCCCCCCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 906 EATLSSPERGCCRD-----LNQLIDPRMDLSTCD-----YEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 906 ~~~~~~~~~~~~~~-----l~~~~d~~l~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.............. ..+.+.......... ......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 22111110000000 000000000000000 1224578899999999999999999999885
No 269
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=327.51 Aligned_cols=275 Identities=20% Similarity=0.295 Sum_probs=197.2
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe------
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS------ 750 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~------ 750 (973)
..+.++|+..+.||+|+||.||+|+.. +|+.||+|++.. ......+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (320)
T 2i6l_A 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQL 84 (320)
T ss_dssp EEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBC
T ss_pred CccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec--CChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccc
Confidence 345678999999999999999999987 589999999853 34455677899999999999999999999873
Q ss_pred --------cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC-C
Q 039922 751 --------GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD-A 821 (973)
Q Consensus 751 --------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~ 821 (973)
..+..++||||++ |+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++ +
T Consensus 85 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 156 (320)
T 2i6l_A 85 TDDVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTE 156 (320)
T ss_dssp CC----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETT
T ss_pred ccccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCC
Confidence 3467899999997 7999998642 588999999999999999999999 999999999999997 5
Q ss_pred CCceEEeccCcchhccccCCCccccccccccccCccccccccC-CCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhH
Q 039922 822 EMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT-KKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDI 900 (973)
Q Consensus 822 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~ 900 (973)
++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||... ...+.
T Consensus 157 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--~~~~~ 233 (320)
T 2i6l_A 157 DLVLKIGDFGLARIMDPHYSH-KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA--HELEQ 233 (320)
T ss_dssp TTEEEECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHH
T ss_pred CCeEEEccCccccccCCCccc-ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC--CHHHH
Confidence 779999999999876433211 122334567899999998765 67899999999999999999999999753 22222
Q ss_pred HHHHHHHhccCCCcccc---CcccccccCCCCCCC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 901 VRWVTEATLSSPERGCC---RDLNQLIDPRMDLST-----CDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~---~~l~~~~d~~l~~~~-----~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
...+............. ..+...+........ ........+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 22222221110000000 000000000000000 001124678999999999999999999999875
No 270
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.3e-35 Score=338.36 Aligned_cols=273 Identities=22% Similarity=0.237 Sum_probs=205.2
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC--------CCCeeeEEeEE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR--------HGNVVKLLMCC 749 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~ 749 (973)
.+.++|+..++||+|+||+||+|+.. +++.||+|++.. .....+.+.+|+.++++++ |+||+++++++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 34578999999999999999999875 688999999942 2345567889999999986 78899999998
Q ss_pred e----cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCC--
Q 039922 750 S----GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEM-- 823 (973)
Q Consensus 750 ~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-- 823 (973)
. .....++||||+ ++++.+++.... ...+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 7 566889999999 567776665432 235899999999999999999999963 799999999999999775
Q ss_pred -----------------------------------------------ceEEeccCcchhccccCCCccccccccccccCc
Q 039922 824 -----------------------------------------------VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGY 856 (973)
Q Consensus 824 -----------------------------------------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y 856 (973)
.+||+|||.+...... .....||..|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~~gt~~y 259 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTEDIQTRQY 259 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSCCSCGGG
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccCCCCCcc
Confidence 7999999999865432 2335789999
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCc----hhHHHHHHHHhccCCCcc------------ccCcc
Q 039922 857 IAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGEN----KDIVRWVTEATLSSPERG------------CCRDL 920 (973)
Q Consensus 857 ~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~------------~~~~l 920 (973)
+|||++.+..++.++|||||||++|||++|+.||....... .+....+.......+... ....+
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 99999999999999999999999999999999997643221 111222222111110000 00000
Q ss_pred cccccCCC--------CCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 921 NQLIDPRM--------DLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 921 ~~~~d~~l--------~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.+... ............+.+++.+|+++||++|||+.|++++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00000000 0012345677889999999999999999999999975
No 271
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.1e-36 Score=336.80 Aligned_cols=274 Identities=19% Similarity=0.224 Sum_probs=189.0
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe--
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF-- 754 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 754 (973)
....++|+..+.||+|+||.||+|+.. +|+.||||++...... ...+.+|+..++.++||||+++++++...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 345678999999999999999999986 7899999998543322 2345677888888999999999999865332
Q ss_pred -----eEEEEeccCCCChhhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCeEEeCCCCCCEEeCC-CCce
Q 039922 755 -----NILVYEYMPNGSLADMLHE-KGRSGSLDWSIRFSIAQGAAKGLAYLH--NDCVPAIVHRDVKSHNILLDA-EMVP 825 (973)
Q Consensus 755 -----~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~ivH~Dlkp~NIll~~-~~~~ 825 (973)
.++||||+++ ++.+.+.. ......+++..+..++.|++.|++||| +. +|+||||||+||+++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 7899999975 55544432 223346889999999999999999999 88 9999999999999997 8999
Q ss_pred EEeccCcchhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHH
Q 039922 826 RVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWV 904 (973)
Q Consensus 826 kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~ 904 (973)
||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||... ........+
T Consensus 172 kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~~ 244 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP-----NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD--NSAGQLHEI 244 (360)
T ss_dssp EECCCTTCBCCCTTSC-----CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHH
T ss_pred EEeeCCCceecCCCCC-----cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC--ChHHHHHHH
Confidence 9999999987654322 2345689999999998654 4899999999999999999999999763 222223222
Q ss_pred HHHhccCCCccc----c-Cccccccc-CCCC----CCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 905 TEATLSSPERGC----C-RDLNQLID-PRMD----LSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 905 ~~~~~~~~~~~~----~-~~l~~~~d-~~l~----~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.......+.... + ..-....+ .... ...........+.+++.+|+++||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 222111100000 0 00000000 0000 001112245689999999999999999999999876
No 272
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=326.23 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=184.0
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 759 (973)
.++|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999986 7999999999655444444455566667788899999999999999999999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHN-DCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
||+ ++.+..+..... ..+++..+..++.|++.||+|||+ . +++||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 455555554322 358999999999999999999998 6 899999999999999999999999999976543
Q ss_pred cCCCccccccccccccCcccccccc-----CCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAY-----TKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPE 913 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
... .....|++.|+|||++. ...++.++||||||+++|||++|+.||.... ........+........
T Consensus 178 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~- 250 (318)
T 2dyl_A 178 DKA-----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-TDFEVLTKVLQEEPPLL- 250 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-SHHHHHHHHHHSCCCCC-
T ss_pred Ccc-----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-ccHHHHHHHhccCCCCC-
Confidence 321 23356899999999984 5568899999999999999999999997532 22222222222111100
Q ss_pred ccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 914 RGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 914 ~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
.. .......+.+++.+|++.||++||++.|++++
T Consensus 251 ---------------~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 ---------------PG---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---------------CS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---------------Cc---cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 00123568899999999999999999999874
No 273
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.1e-35 Score=352.50 Aligned_cols=353 Identities=20% Similarity=0.165 Sum_probs=188.3
Q ss_pred CCCCccCCccCCCCCCCCc----cceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCC
Q 039922 43 DPNRKLGDWVRTSQQSPCN----WTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLS 118 (973)
Q Consensus 43 d~~~~~~sw~~~~~~~~C~----w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~ 118 (973)
+....+++|.. +++||. |.++.|+. ++ +-.+.+... +..-..+++++.|++++|.+. .+|+..|.
T Consensus 4 ~~~~~l~~~~~--~~~C~~~~~~~~c~~~~~---~i---~~~~~~~~~--~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~ 72 (597)
T 3oja_B 4 QQRYNVKPRQP--EYKCIDSNLQYDCVFYDV---HI---DMQTQDVYF--GFEDITLNNQKIVTFKNSTMR-KLPAALLD 72 (597)
T ss_dssp -------CCCS--EECCCCC--CCSEEECSC---EE---CSSCCCCEE--SCSSGGGCCCSEEEESSCEES-EECTHHHH
T ss_pred cccccccCCCC--CCcCcccCcCceeEecCc---ee---ccccccccc--CcccccCCCceEEEeeCCCCC-CcCHHHHc
Confidence 44556889964 455663 66665542 12 111111111 111123556666666666665 45544555
Q ss_pred CcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEe
Q 039922 119 PCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHF 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 198 (973)
.+++|++|+|++|.+.+..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 55555555555555555555555555555555555555555555555555555555555555554444444555555555
Q ss_pred eccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcC
Q 039922 199 ELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQL 278 (973)
Q Consensus 199 ~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 278 (973)
+|++|.++. ..|..++++++|++|+|++|.+++.. +..+++|+.|++++|.+
T Consensus 153 ~Ls~N~l~~-------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 153 SMSNNNLER-------------------------IEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL 204 (597)
T ss_dssp ECCSSCCCB-------------------------CCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCC
T ss_pred EeeCCcCCC-------------------------CChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcc
Confidence 555554432 23344555555555555555555431 33345555555555555
Q ss_pred cccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCcc
Q 039922 279 SGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLG 358 (973)
Q Consensus 279 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 358 (973)
++ +...++|+.|++++|.++...+. + .++|+.|+|++|.+++ +..+.
T Consensus 205 ~~-----l~~~~~L~~L~ls~n~l~~~~~~------------------------~--~~~L~~L~L~~n~l~~--~~~l~ 251 (597)
T 3oja_B 205 ST-----LAIPIAVEELDASHNSINVVRGP------------------------V--NVELTILKLQHNNLTD--TAWLL 251 (597)
T ss_dssp SE-----EECCTTCSEEECCSSCCCEEECS------------------------C--CSCCCEEECCSSCCCC--CGGGG
T ss_pred cc-----ccCCchhheeeccCCcccccccc------------------------c--CCCCCEEECCCCCCCC--Chhhc
Confidence 43 12233455555555554422111 1 1344444444444443 23344
Q ss_pred CCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEE
Q 039922 359 KYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFF 438 (973)
Q Consensus 359 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 438 (973)
.+++|++|+|++|.+++.+|..+..+++|+.|+|++|++++ +|..+..+++|++|+|++|.++ .+|..+..+++|+.|
T Consensus 252 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred cCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 44555555555555554444455555555555555555543 3555566777788888888777 456667777888888
Q ss_pred EeecCcccCCCCCCCCCCCCcceEeecCCcCCCC
Q 039922 439 EMYNNRFEGSISPSISNAPKLTGILINGNNFTGE 472 (973)
Q Consensus 439 ~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 472 (973)
+|++|++.+. .+..+++|+.|++++|++.+.
T Consensus 330 ~L~~N~l~~~---~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 330 YLDHNSIVTL---KLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp ECCSSCCCCC---CCCTTCCCSEEECCSSCEEHH
T ss_pred ECCCCCCCCc---ChhhcCCCCEEEeeCCCCCCh
Confidence 8888887754 367778899999999988754
No 274
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.1e-35 Score=331.12 Aligned_cols=270 Identities=19% Similarity=0.216 Sum_probs=205.0
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CC-CEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCC------eeeEEeEEe
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SG-ETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGN------VVKLLMCCS 750 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~ 750 (973)
.+.++|++.+.||+|+||.||+|... ++ +.||+|++.. .....+.+.+|+.++++++|++ ++++++++.
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 45678999999999999999999975 44 6899999942 2345567888999999997765 999999999
Q ss_pred cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe-----------
Q 039922 751 GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL----------- 819 (973)
Q Consensus 751 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----------- 819 (973)
..+..++||||+ ++++.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 677777776543 23589999999999999999999999 99999999999999
Q ss_pred --------CCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCC
Q 039922 820 --------DAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPND 891 (973)
Q Consensus 820 --------~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~ 891 (973)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH-------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC-------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccCCCcEEEeecCcccccccc-------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 56789999999999764322 233578999999999999999999999999999999999999997
Q ss_pred CCCCCchhHHHHHHHHhccCCCcccc--Cccccc--------------------ccCCCCCCCCCHHHHHHHHHHHHhcc
Q 039922 892 PSFGENKDIVRWVTEATLSSPERGCC--RDLNQL--------------------IDPRMDLSTCDYEEAEKVLNVALMCT 949 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~--------------------~d~~l~~~~~~~~~~~~l~~l~~~cl 949 (973)
.. ...+....+.......+..... ...... ..+..............+.+++.+|+
T Consensus 241 ~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 318 (355)
T 2eu9_A 241 TH--ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRML 318 (355)
T ss_dssp CS--SHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHT
T ss_pred CC--CHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHh
Confidence 53 2233333333322211110000 000000 00000001122345668999999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 039922 950 SDFPINRPSMRRVVEL 965 (973)
Q Consensus 950 ~~dP~~Rps~~evl~~ 965 (973)
+.||++|||+.|++++
T Consensus 319 ~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 319 EFDPAQRITLAEALLH 334 (355)
T ss_dssp CSSTTTSCCHHHHTTS
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999865
No 275
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=342.21 Aligned_cols=277 Identities=21% Similarity=0.278 Sum_probs=187.1
Q ss_pred ccCCCCc-cccccccCCeeEEEEEEC---CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe--cCC
Q 039922 680 ILPHLTE-QNLIGSGGSCRVYKVKLK---SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS--GQD 753 (973)
Q Consensus 680 ~~~~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~ 753 (973)
+.+.|.+ .++||+|+||.||+|+.+ +++.||+|++..... ...+.+|+.++++++||||+++++++. .+.
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 3444555 558999999999999976 578999999953322 235788999999999999999999995 477
Q ss_pred eeEEEEeccCCCChhhhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEe----CCCC
Q 039922 754 FNILVYEYMPNGSLADMLHEKG------RSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILL----DAEM 823 (973)
Q Consensus 754 ~~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~ 823 (973)
..|+||||++ |+|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 8999999996 68888775321 122488999999999999999999999 99999999999999 7789
Q ss_pred ceEEeccCcchhccccCCCccccccccccccCccccccccCC-CCCCCCChhhHHHHHHHHHcCCCCCCCCCCC------
Q 039922 824 VPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTK-KVTEKSDVYSFGVVLMELVTGKRPNDPSFGE------ 896 (973)
Q Consensus 824 ~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~------ 896 (973)
.+||+|||+++........ ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~ 248 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248 (405)
T ss_dssp CEEECCTTCCC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CC
T ss_pred cEEEEECCCceecCCCCcc-cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccccc
Confidence 9999999999876533211 1223446789999999998874 5899999999999999999999999754321
Q ss_pred -chhHHHHHHHHhccCCCccccCcccccccC-----CCC---CCCCCHH---------HHHHHHHHHHhccCCCCCCCCC
Q 039922 897 -NKDIVRWVTEATLSSPERGCCRDLNQLIDP-----RMD---LSTCDYE---------EAEKVLNVALMCTSDFPINRPS 958 (973)
Q Consensus 897 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~-----~l~---~~~~~~~---------~~~~l~~l~~~cl~~dP~~Rps 958 (973)
..+....+...... +.......+..+.+. .+. ....... ....+.+++.+|+++||++|||
T Consensus 249 ~~~~~l~~i~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~t 327 (405)
T 3rgf_A 249 YHHDQLDRIFNVMGF-PADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 327 (405)
T ss_dssp CCHHHHHHHHHHHCC-CCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCC
T ss_pred chHHHHHHHHHhhCC-CChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCC
Confidence 11222222222211 111111111111000 000 0000000 1346789999999999999999
Q ss_pred HHHHHHHH
Q 039922 959 MRRVVELL 966 (973)
Q Consensus 959 ~~evl~~L 966 (973)
+.|++++=
T Consensus 328 a~e~L~hp 335 (405)
T 3rgf_A 328 SEQAMQDP 335 (405)
T ss_dssp HHHHHTSG
T ss_pred HHHHhcCh
Confidence 99999863
No 276
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.9e-36 Score=354.35 Aligned_cols=271 Identities=26% Similarity=0.328 Sum_probs=201.3
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec------
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG------ 751 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 751 (973)
...++|+..+.||+|+||.||+|... +|+.||||++... ......+.+.+|++++++++||||+++++++..
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 34578999999999999999999875 6899999998543 344556778999999999999999999998765
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCc---eEEe
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMV---PRVA 828 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 828 (973)
++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 677899999999999999998765544688999999999999999999999 9999999999999997665 8999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHh
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEAT 908 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 908 (973)
|||.+........ .....||+.|+|||++.+..++.++||||+|+++|||++|..||.... ....|.....
T Consensus 167 DFG~a~~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~ 237 (676)
T 3qa8_A 167 DLGYAKELDQGEL-----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVR 237 (676)
T ss_dssp SCCCCCBTTSCCC-----CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC
T ss_pred ccccccccccccc-----cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhh
Confidence 9999987643321 234678999999999999999999999999999999999999997531 1122211110
Q ss_pred ccCCCccc-cCcccccc--cCC-CCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 039922 909 LSSPERGC-CRDLNQLI--DPR-MDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRV 962 (973)
Q Consensus 909 ~~~~~~~~-~~~l~~~~--d~~-l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev 962 (973)
........ .......+ ... .............+.+++.+|+++||++|||+.|+
T Consensus 238 ~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00000000 00000000 000 01112334567889999999999999999999774
No 277
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.1e-35 Score=332.18 Aligned_cols=335 Identities=19% Similarity=0.183 Sum_probs=221.7
Q ss_pred CCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcc-cCcEE
Q 039922 240 KLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAM-SLESL 318 (973)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L 318 (973)
.+.++++|++++|.++...+..|.++++|++|++++|++++..+..+..+++|++|+|++|.+++..|..+... +|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 45788899999998886655567888889999999998887777788888888888888888887777666544 68888
Q ss_pred EccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccC
Q 039922 319 NLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFS 398 (973)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 398 (973)
+|++|+++...+..|..+++|++|++++|++++..|..+..+++|++|++++|++++.. +..+++|+.|++++|
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n--- 196 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYN--- 196 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSS---
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccc---
Confidence 88888887555555677788888888888887766777777778888888877776431 333444444444444
Q ss_pred CCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhh
Q 039922 399 GKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQIC 478 (973)
Q Consensus 399 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 478 (973)
.+++. ...++|+.|++++|++..... ...++|+.|++++|.+++. ..+.
T Consensus 197 ---------------------~l~~~-----~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 197 ---------------------LLSTL-----AIPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp ---------------------CCSEE-----ECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGG
T ss_pred ---------------------ccccc-----CCCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHc
Confidence 44421 122345555555555543321 1234566666666666643 4566
Q ss_pred cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEE
Q 039922 479 TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSL 558 (973)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 558 (973)
.+++|++|++++|++++..|..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|++|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 6677777777777776666666777777777777777776 34555566677777777777776 456666667777777
Q ss_pred ecCCCcCccccChhhhcc-cccceeccCCcCcccCCCCCcccccccccCCCCCCCCCCC
Q 039922 559 DLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDHDLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 559 ~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~~~~~~~~~~n~~~c~~~l 616 (973)
+|++|++++ +| +..+ .|+.|++++|++++.....+...+....+.+++..|+.+.
T Consensus 324 ~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 324 YLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp ECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCTTC
T ss_pred ECCCCccce-eC--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecccc
Confidence 777777763 33 3344 6677777777776643322222333444566777777543
No 278
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.7e-35 Score=326.79 Aligned_cols=255 Identities=20% Similarity=0.318 Sum_probs=175.2
Q ss_pred ccccCCCCcc-ccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEec----
Q 039922 678 DDILPHLTEQ-NLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSG---- 751 (973)
Q Consensus 678 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---- 751 (973)
..+.++|.+. ++||+|+||.||+|+.+ +|+.||+|++... . ....+....++.++|+||+++++++..
T Consensus 24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P---KARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 4556788885 46999999999999987 7999999998432 1 222233344667799999999999876
Q ss_pred CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CCceEEe
Q 039922 752 QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EMVPRVA 828 (973)
Q Consensus 752 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 828 (973)
+...++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CceEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 4558999999999999999986532 3589999999999999999999999 9999999999999976 4559999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCch--hHHHHHHH
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENK--DIVRWVTE 906 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~--~~~~~~~~ 906 (973)
|||+++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ .....+..
T Consensus 174 Dfg~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 247 (336)
T 3fhr_A 174 DFGFAKETTQNA------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL 247 (336)
T ss_dssp CCTTCEEC----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------
T ss_pred ccccceeccccc------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc
Confidence 999997654221 2345689999999999888899999999999999999999999975422111 00111111
Q ss_pred HhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 907 ATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 907 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
.... ...+.. ......+.+++.+|++.||++|||+.|++++-
T Consensus 248 ~~~~------------~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 248 GQYG------------FPNPEW------SEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ---C------------CCTTTS------TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred cccc------------cCchhh------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 1000 000000 12245688999999999999999999999853
No 279
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.7e-36 Score=331.48 Aligned_cols=258 Identities=23% Similarity=0.301 Sum_probs=178.4
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHH-HHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIE-TLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
.++|+..+.||+|+||.||+|..+ +|+.||||++..... ......+..|.. +++.++||||+++++++..++..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 467889999999999999999986 789999999965433 233344555555 77888999999999999999999999
Q ss_pred EeccCCCChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 759 YEYMPNGSLADMLHEK--GRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
|||++ |+|.+++... .....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99997 5888877631 11336899999999999999999999952 7999999999999999999999999999766
Q ss_pred cccCCCccccccccccccCccccccc----cCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYA----YTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
..... .....||..|+|||++ .+..++.++||||||+++|||++|+.||...... .+.+......
T Consensus 177 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~-- 245 (327)
T 3aln_A 177 VDSIA-----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----FDQLTQVVKG-- 245 (327)
T ss_dssp ----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCS--
T ss_pred ccccc-----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----HHHHHHHhcC--
Confidence 43321 2234689999999998 4567899999999999999999999999742111 1110000000
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
..+.+.. .........+.+++.+|++.||++||++.|++++
T Consensus 246 -----------~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 246 -----------DPPQLSN-SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -----------CCCCCCC-CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----------CCCCCCC-cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000100 0001224578899999999999999999999764
No 280
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.1e-35 Score=349.35 Aligned_cols=335 Identities=19% Similarity=0.180 Sum_probs=236.4
Q ss_pred CCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcc-cCcEE
Q 039922 240 KLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAM-SLESL 318 (973)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L 318 (973)
.+.+++.|++++|.++...+..|.++++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..|..+... +|+.|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35678888888888887666677888888888888888888777788888888888888888887766665543 67777
Q ss_pred EccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccC
Q 039922 319 NLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFS 398 (973)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 398 (973)
+|++|.+++..+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------- 187 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------------------- 187 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---------------------
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---------------------
Confidence 77777777655555677777777777777777766667777777777777777776432
Q ss_pred CCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhh
Q 039922 399 GKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQIC 478 (973)
Q Consensus 399 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 478 (973)
++.+++|++|++++|.+++. ...++|+.|++++|.+....+.. .++|+.|++++|.+++ +..+.
T Consensus 188 ------~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~ 251 (597)
T 3oja_B 188 ------LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLL 251 (597)
T ss_dssp ------GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGG
T ss_pred ------hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--Chhhc
Confidence 23334455555555555432 22345566666666655433222 2467777777777775 35677
Q ss_pred cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEE
Q 039922 479 TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSL 558 (973)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 558 (973)
.+++|+.|+|++|.+++.+|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|
T Consensus 252 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred cCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 77888888888888877777778888888888888888874 5666677788888888888887 577777788888888
Q ss_pred ecCCCcCccccChhhhcc-cccceeccCCcCcccCCCCCcccccccccCCCCCCCCCCC
Q 039922 559 DLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDHDLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 559 ~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~~~~~~~~~~n~~~c~~~l 616 (973)
+|++|++++. | +..+ .|+.|++++|+++|..+..+...+....+.+++..|+.+.
T Consensus 330 ~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 330 YLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCTTC
T ss_pred ECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCcch
Confidence 8888888743 3 3344 6778888888887765443333444555678888888643
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=325.78 Aligned_cols=247 Identities=24% Similarity=0.346 Sum_probs=191.3
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc----hhHHHHHHHHHHHhcC----CCCCeeeEEeE
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP----ETETVFRSEIETLGRV----RHGNVVKLLMC 748 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~~ 748 (973)
+.+.++|+..+.||+|+||.||+|+.. +++.||+|++....... .....+.+|+.+++++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 455678999999999999999999875 78999999996443221 1223456788888888 89999999999
Q ss_pred EecCCeeEEEEec-cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC-CCCceE
Q 039922 749 CSGQDFNILVYEY-MPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD-AEMVPR 826 (973)
Q Consensus 749 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~k 826 (973)
+...+..++|||| +.+++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++ +++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 78999999998653 489999999999999999999999 999999999999999 889999
Q ss_pred EeccCcchhccccCCCccccccccccccCccccccccCCCCC-CCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHH
Q 039922 827 VADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVT-EKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVT 905 (973)
Q Consensus 827 l~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~ 905 (973)
|+|||+++...... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||... ... .
T Consensus 181 l~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~~----~ 246 (312)
T 2iwi_A 181 LIDFGSGALLHDEP------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QEI----L 246 (312)
T ss_dssp ECCCSSCEECCSSC------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHH----H
T ss_pred EEEcchhhhcccCc------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HHH----h
Confidence 99999998764322 2345689999999998876664 5899999999999999999999631 111 1
Q ss_pred HHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 906 EATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 906 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
..... +. ......+.+++.+|++.||++||++.|++++-
T Consensus 247 ~~~~~-----------------~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 247 EAELH-----------------FP-----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp HTCCC-----------------CC-----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred hhccC-----------------Cc-----ccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 11100 00 11235678999999999999999999999853
No 282
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.6e-35 Score=326.55 Aligned_cols=246 Identities=23% Similarity=0.339 Sum_probs=199.4
Q ss_pred ccccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCc----hhHHHHHHHHHHHhcCC--CCCeeeEEeEEe
Q 039922 678 DDILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKP----ETETVFRSEIETLGRVR--HGNVVKLLMCCS 750 (973)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~~ 750 (973)
+.+.++|+..+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|+.++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 445678999999999999999999875 78999999996543221 12244677999999996 599999999999
Q ss_pred cCCeeEEEEeccCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC-CCCceEEe
Q 039922 751 GQDFNILVYEYMPN-GSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD-AEMVPRVA 828 (973)
Q Consensus 751 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 828 (973)
..+..++|||++.+ ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ +++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 99999999999976 89999997643 588999999999999999999999 999999999999999 78999999
Q ss_pred ccCcchhccccCCCccccccccccccCccccccccCCCC-CCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHH
Q 039922 829 DFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKV-TEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEA 907 (973)
Q Consensus 829 DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 907 (973)
|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||... ... ...
T Consensus 193 Dfg~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~~~----~~~ 258 (320)
T 3a99_A 193 DFGSGALLKDTV------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEI----IRG 258 (320)
T ss_dssp CCTTCEECCSSC------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHH----HHC
T ss_pred eCcccccccccc------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----hhh----hcc
Confidence 999998664321 233568999999999887665 67899999999999999999999641 111 110
Q ss_pred hccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 908 TLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 908 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
... .. ......+.+++.+|++.||++|||+.|++++
T Consensus 259 ~~~-------------~~---------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 QVF-------------FR---------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCC-------------CS---------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc-------------cc---------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00 0113568899999999999999999999875
No 283
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=335.69 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=186.0
Q ss_pred CCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEEEEec
Q 039922 683 HLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNILVYEY 761 (973)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 761 (973)
+|...++||+|+||+||.....+|+.||||++..... ..+.+|+.+++++ +|||||++++++.+.+..|+||||
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 5778899999999997766666899999999953321 1256799999999 799999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC-----CCceEEeccCcchhc
Q 039922 762 MPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA-----EMVPRVADFGLAKAL 836 (973)
Q Consensus 762 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGl~~~~ 836 (973)
++ |+|.+++..... ...+..+..++.||+.||+|||+. +|+||||||+||+++. ...+||+|||+++..
T Consensus 100 ~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 95 799999976543 344455678999999999999999 9999999999999953 336889999999876
Q ss_pred cccCCCccccccccccccCcccccccc---CCCCCCCCChhhHHHHHHHHHc-CCCCCCCCCCCchhHHHHHHHHhccCC
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAY---TKKVTEKSDVYSFGVVLMELVT-GKRPNDPSFGENKDIVRWVTEATLSSP 912 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
...... ........||+.|+|||++. ...++.++||||+||++|||++ |..||.... ......+ ... .
T Consensus 174 ~~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~---~~~~~~~---~~~-~ 245 (432)
T 3p23_A 174 AVGRHS-FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL---QRQANIL---LGA-C 245 (432)
T ss_dssp -------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT---THHHHHH---TTC-C
T ss_pred cCCCcc-eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh---HHHHHHH---hcc-C
Confidence 543211 12233467999999999997 4567889999999999999999 888885421 1111111 100 0
Q ss_pred CccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039922 913 ERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVEL 965 (973)
Q Consensus 913 ~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 965 (973)
. .... .........+.+++.+|++.||++|||+.||+++
T Consensus 246 ~-------~~~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 246 S-------LDCL-------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp C-------CTTS-------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C-------cccc-------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0 0000 0112345567899999999999999999999864
No 284
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.1e-34 Score=327.70 Aligned_cols=268 Identities=21% Similarity=0.300 Sum_probs=201.2
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-----------CCCeeeEEeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-----------HGNVVKLLMC 748 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 748 (973)
.++|+..+.||+|+||.||+|+.. +++.||||++.. .....+.+.+|+.++++++ |+||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 457999999999999999999975 789999999942 2344567888999999886 8899999999
Q ss_pred EecCC----eeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeC----
Q 039922 749 CSGQD----FNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLD---- 820 (973)
Q Consensus 749 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---- 820 (973)
+...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 87644 789999999 8999999976432 35889999999999999999999953 899999999999994
Q ss_pred --CCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCC--
Q 039922 821 --AEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGE-- 896 (973)
Q Consensus 821 --~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~-- 896 (973)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 243 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH-------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC-------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CcCcceEEEcccccccccCCC-------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 4458999999999765432 22357899999999999999999999999999999999999999754221
Q ss_pred --chhHHHHHHHHhccCCCc---------------cccCc--------ccccccCCCCCCCCCHHHHHHHHHHHHhccCC
Q 039922 897 --NKDIVRWVTEATLSSPER---------------GCCRD--------LNQLIDPRMDLSTCDYEEAEKVLNVALMCTSD 951 (973)
Q Consensus 897 --~~~~~~~~~~~~~~~~~~---------------~~~~~--------l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~ 951 (973)
..+....+.......+.. +.... +.+..... ..........+.+++.+|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~ 320 (373)
T 1q8y_A 244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK---YKFSKDEAKEISDFLSPMLQL 320 (373)
T ss_dssp -CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHT---TCCCHHHHHHHHHHHGGGGCS
T ss_pred CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhc---ccCCcchHHHHHHHHHHHhcc
Confidence 111111111111111100 00000 00000000 123356778899999999999
Q ss_pred CCCCCCCHHHHHHH
Q 039922 952 FPINRPSMRRVVEL 965 (973)
Q Consensus 952 dP~~Rps~~evl~~ 965 (973)
||++|||+.|++++
T Consensus 321 dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 321 DPRKRADAGGLVNH 334 (373)
T ss_dssp STTTCBCHHHHHTC
T ss_pred CccccCCHHHHhhC
Confidence 99999999999875
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=6.7e-35 Score=321.73 Aligned_cols=272 Identities=20% Similarity=0.266 Sum_probs=209.1
Q ss_pred cchhhHHHHHHHhhhccCCCCCccCCcc--CCCCCCCCccceeEEcC--------CCCceeEeecCCCccCCCCCCCccC
Q 039922 25 SLHGDAEILIRVKSDQLDDPNRKLGDWV--RTSQQSPCNWTGITCET--------QNQSVDGIDLSGFDLSGGFPNGFCR 94 (973)
Q Consensus 25 ~~~~~~~~l~~~k~~~~~d~~~~~~sw~--~~~~~~~C~w~gv~c~~--------~~~~v~~l~l~~~~l~g~~~~~~~~ 94 (973)
....|++||++||+++..||.+.+++|. .....++|.|.|++|+. ...+|+.|+|++++++ .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 4567999999999998889999999995 12245789999999952 3467999999999998 78888999
Q ss_pred ccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCC-------
Q 039922 95 IRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGR------- 167 (973)
Q Consensus 95 l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~------- 167 (973)
+++|++|+|++|.++ .+| ..++.+++|++|+|++|.+. .+|..++.+++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp-~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELP-DTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GTTCSEEEEESSCCC-CCC-SCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred CCCCCEEECCCCCcc-chh-HHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 999999999999998 666 46889999999999999988 77888999999999999998888888887764
Q ss_pred --CCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCC
Q 039922 168 --FPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLS 245 (973)
Q Consensus 168 --l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 245 (973)
+++|++|+|++|+++ .+|..++++++|++|+|++|+++. +|..++.+++|++|++++|++.+.+|..++++++|+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~--l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA--LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC--CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc--CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 888888888888888 667788888888888888888875 455566666666666666666666666666666666
Q ss_pred EEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccC
Q 039922 246 NLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLT 303 (973)
Q Consensus 246 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 303 (973)
+|+|++|.+.+.+|..+.++++|++|++++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6666666665566666666666666666666666666666666666666665555443
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.6e-33 Score=312.97 Aligned_cols=307 Identities=23% Similarity=0.336 Sum_probs=196.0
Q ss_pred ccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcE
Q 039922 238 IGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLES 317 (973)
Q Consensus 238 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~ 317 (973)
+..+++|++|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|++|++++|.++. ++......+|++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~~~~~l~~L~~ 114 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-ISALQNLTNLRE 114 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGGGTTCTTCSE
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-chHHcCCCcCCE
Confidence 4567788888888888874 34 37788888888888888885433 7888888888888888875 343333346888
Q ss_pred EEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCcc
Q 039922 318 LNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRF 397 (973)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 397 (973)
|++++|.+++..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 8888888875433 7777888888888886553433 37778888888888887764433 55666666666666666
Q ss_pred CCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhh
Q 039922 398 SGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQI 477 (973)
Q Consensus 398 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 477 (973)
.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.+++. ..+
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~ 261 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAV 261 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGG
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhH
Confidence 54332 5666666666666666664443 5556666666666666654333 55556666666666665532 345
Q ss_pred hcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccE
Q 039922 478 CTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTS 557 (973)
Q Consensus 478 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 557 (973)
..+++|++|++++|++++. +.+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..| +..+++|++
T Consensus 262 ~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 337 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDS 337 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSE
T ss_pred hcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccce
Confidence 5556666666666666532 235555666666666666655555555556666666666666654333 555566666
Q ss_pred EecCCCcCc
Q 039922 558 LDLSSNLLT 566 (973)
Q Consensus 558 L~Ls~N~l~ 566 (973)
||+++|+++
T Consensus 338 L~l~~N~i~ 346 (347)
T 4fmz_A 338 ADFANQVIK 346 (347)
T ss_dssp ESSSCC---
T ss_pred eehhhhccc
Confidence 666666554
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-32 Score=306.74 Aligned_cols=64 Identities=25% Similarity=0.316 Sum_probs=30.9
Q ss_pred hhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCccc
Q 039922 477 ICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLT 542 (973)
Q Consensus 477 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (973)
+..+++|+.|++++|++++..|..++.+++|+.|+|++|++++..| +..+++|+.|++++|.|+
T Consensus 283 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 283 LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 4444455555555555554444445555555555555555554333 445555555555555543
No 288
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.9e-34 Score=312.96 Aligned_cols=244 Identities=31% Similarity=0.465 Sum_probs=133.7
Q ss_pred cCcEEEccCCcCCC--CCCccccCCCccceeeecc-ccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhh
Q 039922 314 SLESLNLNDNYFTG--EIPESLASNPNLVQLKLFN-NSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCI 390 (973)
Q Consensus 314 ~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 390 (973)
+++.|+|++|.+++ .+|..+.++++|++|+|++ |.+.+.+|..++++++|++|+|++|++++.+|..+..
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~------- 123 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ------- 123 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGG-------
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhC-------
Confidence 46666666666666 5666666666666666663 6666666666666666666666666665544444433
Q ss_pred hcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCC-CcceEeecCCcC
Q 039922 391 IIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAP-KLTGILINGNNF 469 (973)
Q Consensus 391 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~L~~L~L~~N~l 469 (973)
+++|++|++++|.+++..|..|..+++|+.|++++|++++.+|..+..++ +|+.|++++|.+
T Consensus 124 -----------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 124 -----------------IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp -----------------CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred -----------------CCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 44444444444444444444444444444444444444433344444443 444444444545
Q ss_pred CCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccc
Q 039922 470 TGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPEL 549 (973)
Q Consensus 470 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 549 (973)
++.+|..+..++ |++|++++|++++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..|
T Consensus 187 ~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 445555555554 66666666666555555556666666666666666544443 5555666666666666665566666
Q ss_pred cccccccEEecCCCcCccccChhhhcc-cccceecc
Q 039922 550 GNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNIS 584 (973)
Q Consensus 550 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~ 584 (973)
..+++|+.|+|++|+++|.+|.. ..+ .|+.++++
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~ 299 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYA 299 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTC
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhc
Confidence 66666666666666666655554 333 44444443
No 289
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.2e-34 Score=306.34 Aligned_cols=235 Identities=12% Similarity=0.034 Sum_probs=185.0
Q ss_pred cccCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCCCC-chhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeE
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHK-PETETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNI 756 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 756 (973)
.+.++|++.+.||+|+||.||+|++. +|+.||+|++...... ....+.+.+|+..+++++||||+++++++..++..|
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 34578999999999999999999986 5899999999655433 344577899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhc
Q 039922 757 LVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 757 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
+||||+++++|.++++.. ....++.+|+.|++.||+|||++ +|+||||||+||++++++.+||+++|
T Consensus 108 lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 999999999999998542 34556888999999999999999 99999999999999999999998543
Q ss_pred cccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccc
Q 039922 837 QSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGC 916 (973)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (973)
|++ .++.++|||||||++|||++|+.||........ +.
T Consensus 175 -------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~--------------- 212 (286)
T 3uqc_A 175 -------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LA--------------- 212 (286)
T ss_dssp -------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SE---------------
T ss_pred -------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hH---------------
Confidence 233 367899999999999999999999976422110 00
Q ss_pred cCcccccccCCCC-CCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhhccc
Q 039922 917 CRDLNQLIDPRMD-LSTCDYEEAEKVLNVALMCTSDFPINRPSMRRVVELLRVDKS 971 (973)
Q Consensus 917 ~~~l~~~~d~~l~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 971 (973)
.....+..... ...........+.+++.+|++.||++| |+.|+++.|++...
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 213 --PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp --ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred --HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00000000000 000001224568899999999999999 99999999987543
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-33 Score=342.69 Aligned_cols=241 Identities=21% Similarity=0.272 Sum_probs=192.8
Q ss_pred cccCCCCccccccccCCeeEEEEEEC--CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEecCCe--
Q 039922 679 DILPHLTEQNLIGSGGSCRVYKVKLK--SGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCSGQDF-- 754 (973)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 754 (973)
.+.++|++.+.||+|+||.||+|.+. +|+.||||++... ........+.+|+.++++++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 34578999999999999999999986 6899999998543 234555678999999999999999999999987654
Q ss_pred ---eEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 755 ---NILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 755 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
.|+||||+++++|.+++.. .+++..++.++.||+.||+|||++ +|+||||||+||+++++ .+||+|||
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp CEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred CceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999987654 489999999999999999999999 99999999999999986 89999999
Q ss_pred cchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccC
Q 039922 832 LAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWVTEATLSS 911 (973)
Q Consensus 832 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
+++..... ....||++|+|||++.++. +.++|||||||++|||++|..|+......
T Consensus 227 ~a~~~~~~--------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------------- 282 (681)
T 2pzi_A 227 AVSRINSF--------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD--------------- 282 (681)
T ss_dssp TCEETTCC--------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS---------------
T ss_pred cchhcccC--------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc---------------
Confidence 99865332 2357999999999987654 88999999999999999998887642110
Q ss_pred CCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHhh
Q 039922 912 PERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRPS-MRRVVELLRV 968 (973)
Q Consensus 912 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~evl~~L~~ 968 (973)
.+ .. ..........+.+++.+|+++||++||+ +.++...+..
T Consensus 283 -------~~---~~-----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 283 -------GL---PE-----DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -------SC---CT-----TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -------cc---cc-----cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00 00 0001123457889999999999999995 5556555543
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.2e-33 Score=304.12 Aligned_cols=238 Identities=21% Similarity=0.313 Sum_probs=182.3
Q ss_pred cccccccCCCCcc-ccccccCCeeEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHH-hcCCCCCeeeEEeEEec
Q 039922 675 FNEDDILPHLTEQ-NLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETL-GRVRHGNVVKLLMCCSG 751 (973)
Q Consensus 675 ~~~~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~ 751 (973)
.....+.++|... ++||+|+||.||+|... +++.||+|++.. ...+.+|++++ +..+||||+++++++..
T Consensus 10 ~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~ 82 (299)
T 3m2w_A 10 IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYEN 82 (299)
T ss_dssp CBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred CcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhh
Confidence 3345667778777 78999999999999985 789999999842 23466788887 56689999999999876
Q ss_pred ----CCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC---CCc
Q 039922 752 ----QDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA---EMV 824 (973)
Q Consensus 752 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~ 824 (973)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~ 158 (299)
T 3m2w_A 83 LYAGRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 158 (299)
T ss_dssp EETTEEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCC
T ss_pred hcCCCceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCc
Confidence 677899999999999999998753 23589999999999999999999999 9999999999999998 789
Q ss_pred eEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCCCCCCchhHHHHH
Q 039922 825 PRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDIVRWV 904 (973)
Q Consensus 825 ~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~ 904 (973)
+||+|||++.... +..++.++||||+||++|||++|+.||...... ...
T Consensus 159 ~kl~Dfg~a~~~~--------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~--- 207 (299)
T 3m2w_A 159 LKLTDFGFAKETT--------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AIS--- 207 (299)
T ss_dssp EEECCCTTCEECT--------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------
T ss_pred EEEeccccccccc--------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcch--hhh---
Confidence 9999999886431 234677899999999999999999999653211 000
Q ss_pred HHHhccCCCccccCcccccccCCCCCCCC-CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039922 905 TEATLSSPERGCCRDLNQLIDPRMDLSTC-DYEEAEKVLNVALMCTSDFPINRPSMRRVVELL 966 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 966 (973)
. .....+.......... .......+.+++.+|++.||++|||+.|++++-
T Consensus 208 -----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 208 -----P-------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp -----C-------CSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -----H-------HHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 0 0000000000000000 011246789999999999999999999999863
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-33 Score=320.94 Aligned_cols=245 Identities=16% Similarity=0.128 Sum_probs=179.9
Q ss_pred cCCCCccccccccCCeeEEEEEEC-CCCEEEEEEecCCC-CCchhHHHHHHHHHHHhcCCC-CCe----------e----
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGT-HKPETETVFRSEIETLGRVRH-GNV----------V---- 743 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h-~ni----------v---- 743 (973)
...|+..++||+|+||.||+|++. +|+.||||++.... ......+.+++|+.+++.++| ++. +
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345778899999999999999965 79999999986332 222335678999999999987 221 1
Q ss_pred -e------EEeEEec-----CCeeEEEEeccCCCChhhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 039922 744 -K------LLMCCSG-----QDFNILVYEYMPNGSLADMLHEK----GRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAI 807 (973)
Q Consensus 744 -~------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 807 (973)
. +..++.. ....+++|+++ +++|.++++.. .....+++..++.++.||+.||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1 1111111 22356777766 68999888522 1223578889999999999999999999 99
Q ss_pred EEeCCCCCCEEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccc----------cCCCCCCCCChhhHH
Q 039922 808 VHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYA----------YTKKVTEKSDVYSFG 877 (973)
Q Consensus 808 vH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slG 877 (973)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||||||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG 304 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence 99999999999999999999999998764322 233567 999999999 556688899999999
Q ss_pred HHHHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 039922 878 VVLMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTCDYEEAEKVLNVALMCTSDFPINRP 957 (973)
Q Consensus 878 ~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 957 (973)
|++|||++|+.||...... . ....++.... .....+.+++.+|+++||++||
T Consensus 305 vil~elltg~~Pf~~~~~~--~-------------------~~~~~~~~~~-------~~~~~~~~li~~~l~~dP~~Rp 356 (413)
T 3dzo_A 305 LAIYWIWCADLPNTDDAAL--G-------------------GSEWIFRSCK-------NIPQPVRALLEGFLRYPKEDRL 356 (413)
T ss_dssp HHHHHHHHSSCCCCTTGGG--S-------------------CSGGGGSSCC-------CCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHCCCCCCCcchh--h-------------------hHHHHHhhcc-------cCCHHHHHHHHHHccCChhhCc
Confidence 9999999999999753210 0 0111111100 1135688999999999999999
Q ss_pred CHHHHHHH
Q 039922 958 SMRRVVEL 965 (973)
Q Consensus 958 s~~evl~~ 965 (973)
++.|++++
T Consensus 357 t~~~~l~~ 364 (413)
T 3dzo_A 357 LPLQAMET 364 (413)
T ss_dssp CHHHHTTS
T ss_pred CHHHHHhC
Confidence 98887553
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.1e-31 Score=297.45 Aligned_cols=286 Identities=23% Similarity=0.258 Sum_probs=163.7
Q ss_pred CccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeecc
Q 039922 122 HLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELG 201 (973)
Q Consensus 122 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 201 (973)
+|+.++++++.+. .+|..+ .++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3444444444443 234333 2567777777777776666677777777777777777777767777777777777777
Q ss_pred CcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCc--
Q 039922 202 YNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLS-- 279 (973)
Q Consensus 202 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-- 279 (973)
+|+++.+ |. .+. ++|++|++++|++++..+..|.++++|++|++++|.++
T Consensus 111 ~n~l~~l--~~------------------------~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 162 (332)
T 2ft3_A 111 KNHLVEI--PP------------------------NLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS 162 (332)
T ss_dssp SSCCCSC--CS------------------------SCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG
T ss_pred CCcCCcc--Cc------------------------ccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccC
Confidence 7776542 21 111 45677777777776555556677777777777777764
Q ss_pred ccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccC
Q 039922 280 GELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGK 359 (973)
Q Consensus 280 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 359 (973)
+..+..+..+ +|+.|++++|.+++ +|..+. .+|++|++++|++++..+..+..+++|+.|+|++|++++..+..+..
T Consensus 163 ~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~-~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 239 (332)
T 2ft3_A 163 GFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP-ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF 239 (332)
T ss_dssp GSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC-SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG
T ss_pred CCCcccccCC-ccCEEECcCCCCCc-cCcccc-CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC
Confidence 3555666666 67777777777664 232222 35566666666666555555666666666666666666555555666
Q ss_pred CCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCC------cceeeEEEccCCccc--cccCcccCC
Q 039922 360 YSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGE------CKTLNYLRFGGNELQ--GELPSKFWG 431 (973)
Q Consensus 360 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~~~~~~~ 431 (973)
+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|.. ...|+.|++++|.+. +..|..|..
T Consensus 240 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp CTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 666666666666655 34444444444444444444444333333332 233444555555444 333333444
Q ss_pred CCCccEEEeec
Q 039922 432 LPEVDFFEMYN 442 (973)
Q Consensus 432 l~~L~~L~L~~ 442 (973)
+++|+.+++++
T Consensus 319 l~~L~~l~l~~ 329 (332)
T 2ft3_A 319 VTDRLAIQFGN 329 (332)
T ss_dssp BCCSTTEEC--
T ss_pred cchhhhhhccc
Confidence 44444444433
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.3e-31 Score=294.73 Aligned_cols=267 Identities=20% Similarity=0.272 Sum_probs=179.3
Q ss_pred cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcc
Q 039922 314 SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIF 393 (973)
Q Consensus 314 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 393 (973)
.++.|+|++|++++..+..|.++++|++|+|++|++++..|..+..+++|++|++++|+++ .+|..+. ++|+.|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECC
Confidence 4555555555555554555666666666666666666555666666666666666666665 2333222 456666666
Q ss_pred cCccCCCCCCccCCcceeeEEEccCCcccc--ccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCC
Q 039922 394 NNRFSGKIPESYGECKTLNYLRFGGNELQG--ELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTG 471 (973)
Q Consensus 394 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~ 471 (973)
+|++.+..+..+..+++|++|++++|.+.. ..+..|.++++|+.|++++|+++.. |..+. ++|++|++++|.+++
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~l~~ 206 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGLP--PSLTELHLDGNKITK 206 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSCC--TTCSEEECTTSCCCE
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC-Ccccc--ccCCEEECCCCcCCc
Confidence 666665555566677777777777777743 5566677777777777777777643 33332 678888888888887
Q ss_pred CCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccc
Q 039922 472 EVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGN 551 (973)
Q Consensus 472 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 551 (973)
..|..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..
T Consensus 207 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~ 285 (330)
T 1xku_A 207 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 285 (330)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCC
Confidence 77777888888888888888888766667888888888888888887 77777888888888888888888665566643
Q ss_pred ------cccccEEecCCCcCcc--ccChhhhcc-cccceeccCCc
Q 039922 552 ------LAVLTSLDLSSNLLTG--EIPLELTKL-KLNQFNISHNK 587 (973)
Q Consensus 552 ------l~~L~~L~Ls~N~l~~--~~p~~l~~l-~l~~l~l~~N~ 587 (973)
.+.|+.|++++|++.. ..|..+..+ .++.+++++|+
T Consensus 286 ~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 286 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3677888888888763 344556656 78888888774
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.5e-31 Score=296.32 Aligned_cols=288 Identities=19% Similarity=0.299 Sum_probs=149.1
Q ss_pred CCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcc-cCcEEEcc
Q 039922 243 FLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAM-SLESLNLN 321 (973)
Q Consensus 243 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~ 321 (973)
+++.+++++|.++ .+|..+. ++|+.|++++|++++..|..+.++++|++|++++|.+++..|..+... +|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5777777777776 4555443 567777777777776666667777777777777777665555544432 45555555
Q ss_pred CCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCC
Q 039922 322 DNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKI 401 (973)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 401 (973)
+|+++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|+++. .+..
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~ 165 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN----------------------SGFE 165 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG----------------------GGSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc----------------------CCCC
Confidence 55555 3333332 455555555555554433445555555555555555532 0122
Q ss_pred CCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCC
Q 039922 402 PESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLR 481 (973)
Q Consensus 402 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 481 (973)
+..+..+ +|++|++++|++++ +|..+. ++|+.|++++|++++..+..+..+++|+.|++++|++++..+..+..++
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 241 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP 241 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCT
T ss_pred cccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCC
Confidence 3333333 44444444444443 222111 3444444444444444444455555555555555555544444555555
Q ss_pred cCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCcc------ccceeeeeccCccc--CCCCccccccc
Q 039922 482 QLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSL------TALIVLNLSTNQLT--GTIPPELGNLA 553 (973)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--~~~p~~~~~l~ 553 (973)
+|++|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|..+ .+|+.|++++|.++ +..|..|..++
T Consensus 242 ~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 242 TLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp TCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred CCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccc
Confidence 5555555555555 455555555555555555555554444444332 34455555555554 34444455555
Q ss_pred cccEEecCCC
Q 039922 554 VLTSLDLSSN 563 (973)
Q Consensus 554 ~L~~L~Ls~N 563 (973)
+|+.|+|++|
T Consensus 321 ~L~~l~l~~n 330 (332)
T 2ft3_A 321 DRLAIQFGNY 330 (332)
T ss_dssp CSTTEEC---
T ss_pred hhhhhhcccc
Confidence 5555555554
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-35 Score=345.20 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=68.2
Q ss_pred CCCCEEECcCCcCCCCCCcc-cCCCCcccEEecCCcccCC----cccccccccccccEeeccCcCCCCCCCCccccCcch
Q 039922 145 ANLQVLDLSRNNFSGDIPES-FGRFPVLKVLNLGGNLLSG----LIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSK 219 (973)
Q Consensus 145 ~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 219 (973)
++|++|||++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+...
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~----------- 71 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDV----------- 71 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHH-----------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChH-----------
Confidence 35666666666665332222 4556666666666666653 2344455556666666666554320
Q ss_pred hHHHhhccCcccccCCccc-cCCC----CCCEEEccCCcccc----cCCcCCCCCCCCCEEEccCCcCcccCchhccC--
Q 039922 220 LENLWAAKANLIGEIPDSI-GKLA----FLSNLDLSDNFLSG----KIPHSFSGLASIEQIELFDNQLSGELPESLSN-- 288 (973)
Q Consensus 220 L~~L~l~~n~l~~~~p~~l-~~l~----~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-- 288 (973)
.+..+ ..+. +|++|+|++|.++. .++..+..+++|++|++++|.+++..+..+..
T Consensus 72 --------------~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 137 (461)
T 1z7x_W 72 --------------GVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGL 137 (461)
T ss_dssp --------------HHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHH
Confidence 01111 1122 46666666666653 33555556666666666666655433332221
Q ss_pred ---CCccceeeccccccCC
Q 039922 289 ---LTTLLRLDISQNNLTG 304 (973)
Q Consensus 289 ---l~~L~~L~Ls~N~l~~ 304 (973)
.++|++|++++|.+++
T Consensus 138 ~~~~~~L~~L~L~~n~l~~ 156 (461)
T 1z7x_W 138 LDPQCRLEKLQLEYCSLSA 156 (461)
T ss_dssp TSTTCCCCEEECTTSCCBG
T ss_pred hcCCCcceEEECCCCCCCH
Confidence 3345555555555554
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=3.4e-33 Score=310.31 Aligned_cols=246 Identities=14% Similarity=0.040 Sum_probs=184.7
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCC------CchhHHHHHHHHHHHhcCC---------CCCeeeE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTH------KPETETVFRSEIETLGRVR---------HGNVVKL 745 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l 745 (973)
.++|+..+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|+.+++.++ |+|||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 589999999965432 2233467888988888885 7777777
Q ss_pred EeEEe------------------------------cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHH
Q 039922 746 LMCCS------------------------------GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKG 795 (973)
Q Consensus 746 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 795 (973)
.+++. ..+..|+||||+++|++.+.+.. ..+++..+..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 76642 26789999999999977666643 247999999999999999
Q ss_pred HHHHh-hcCCCCeEEeCCCCCCEEeCCCC--------------------ceEEeccCcchhccccCCCcccccccccccc
Q 039922 796 LAYLH-NDCVPAIVHRDVKSHNILLDAEM--------------------VPRVADFGLAKALQSQEGQSDDAMSCVAGSY 854 (973)
Q Consensus 796 L~yLH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~ 854 (973)
|+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------~~~gt~ 241 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------IVVFCD 241 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------EEECCC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------cEEEee
Confidence 99999 88 999999999999999887 8999999999876421 247899
Q ss_pred CccccccccCCCCCCCCChhhHHHH-HHHHHcCCCCCCCCCCCchhHHHHHHHHhccCCCccccCcccccccCCCCCCCC
Q 039922 855 GYIAPEYAYTKKVTEKSDVYSFGVV-LMELVTGKRPNDPSFGENKDIVRWVTEATLSSPERGCCRDLNQLIDPRMDLSTC 933 (973)
Q Consensus 855 ~y~aPE~~~~~~~~~~~Dv~slG~~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~ 933 (973)
.|+|||++.+.. +.++||||+|++ .+++++|..||.... ......+.+...... +.......
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~ 304 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-WLHYLTDKMLKQMTF---------------KTKCNTPA 304 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-HHHHHHHHHHHTCCC---------------SSCCCSHH
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-hhhHHHHhhhhhhcc---------------Ccccchhh
Confidence 999999998766 889999998777 788899998874200 000111111111000 00000011
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHH-HH
Q 039922 934 DYEEAEKVLNVALMCTSDFPINRPSMRRVV-EL 965 (973)
Q Consensus 934 ~~~~~~~l~~l~~~cl~~dP~~Rps~~evl-~~ 965 (973)
......++.+++.+|+++| |+.|++ +|
T Consensus 305 ~~~~s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 305 MKQIKRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred hhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 1346778999999999976 999998 54
No 298
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.2e-31 Score=292.62 Aligned_cols=291 Identities=18% Similarity=0.284 Sum_probs=192.7
Q ss_pred CCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcc-cCcEEEc
Q 039922 242 AFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAM-SLESLNL 320 (973)
Q Consensus 242 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L 320 (973)
.+++.++++++.++ .+|..+. ++++.|++++|++++..+..|.++++|++|+|++|.+++..|..+... +|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36888899888887 4565553 578888888888887766678888888888888888876656655543 5666666
Q ss_pred cCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCC
Q 039922 321 NDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGK 400 (973)
Q Consensus 321 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 400 (973)
++|+++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|+++. .+.
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~ 162 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGI 162 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGB
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCc
Confidence 666666 3444333 566666666666665555556666666666666666642 013
Q ss_pred CCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcC
Q 039922 401 IPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTL 480 (973)
Q Consensus 401 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 480 (973)
.+..+..+++|++|++++|.++. +|..+. ++|+.|++++|++++..+..+..+++|+.|++++|.+++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 34445555555555555555553 222222 566666666666666556666666667777777777766666667777
Q ss_pred CcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCc------cccceeeeeccCcccC--CCCcccccc
Q 039922 481 RQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNS------LTALIVLNLSTNQLTG--TIPPELGNL 552 (973)
Q Consensus 481 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~l 552 (973)
++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|.. ...|+.|++++|.+.. ..|..|..+
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~ 318 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 318 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc
Confidence 77777777777777 66777777777777777777777665566543 3677888888888753 556788888
Q ss_pred ccccEEecCCCc
Q 039922 553 AVLTSLDLSSNL 564 (973)
Q Consensus 553 ~~L~~L~Ls~N~ 564 (973)
..++.++|++|+
T Consensus 319 ~~l~~l~L~~N~ 330 (330)
T 1xku_A 319 YVRAAVQLGNYK 330 (330)
T ss_dssp CCGGGEEC----
T ss_pred cceeEEEecccC
Confidence 888888888885
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=8.1e-35 Score=338.72 Aligned_cols=379 Identities=20% Similarity=0.233 Sum_probs=231.7
Q ss_pred cccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccc----cCCccccCCCCCCEEEccCCcccccCCcCC-CCCC
Q 039922 192 LTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIG----EIPDSIGKLAFLSNLDLSDNFLSGKIPHSF-SGLA 266 (973)
Q Consensus 192 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~ 266 (973)
+++|++|+|++|+++.......+..+++|++|++++|++.. .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 36789999999998765444446677778888888887764 346667777888888888887765433322 2333
Q ss_pred ----CCCEEEccCCcCcc----cCchhccCCCccceeeccccccCCCChhhhhc------ccCcEEEccCCcCCCCC---
Q 039922 267 ----SIEQIELFDNQLSG----ELPESLSNLTTLLRLDISQNNLTGNLPETIAA------MSLESLNLNDNYFTGEI--- 329 (973)
Q Consensus 267 ----~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~------~~L~~L~L~~N~l~~~~--- 329 (973)
+|++|++++|+++. .++..+..+++|++|++++|.+++..+..+.. .+|++|++++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 58888888888773 45677777788888888888776443333322 14777777777666532
Q ss_pred -CccccCCCccceeeeccccccCCCCCCcc-----CCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCC
Q 039922 330 -PESLASNPNLVQLKLFNNSFSGKLPDDLG-----KYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPE 403 (973)
Q Consensus 330 -p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 403 (973)
+..+..+++|++|++++|.+++..+..+. ..++|++|++++|.+++.... .++.
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~ 221 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--------------------DLCG 221 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--------------------HHHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--------------------HHHH
Confidence 44445556666666666666543333332 134566666666655532100 1233
Q ss_pred ccCCcceeeEEEccCCcccccc-----CcccCCCCCccEEEeecCcccCC----CCCCCCCCCCcceEeecCCcCCCCCc
Q 039922 404 SYGECKTLNYLRFGGNELQGEL-----PSKFWGLPEVDFFEMYNNRFEGS----ISPSISNAPKLTGILINGNNFTGEVP 474 (973)
Q Consensus 404 ~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~L~~N~l~~~~p 474 (973)
.+..+++|++|++++|.+++.. +..+..+++|+.|++++|+++.. ++..+..+++|++|++++|.+++..+
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 301 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHH
Confidence 4445555666666666555432 22233455666666666665542 34445556667777777776654444
Q ss_pred hhhhcC-----CcCcEEeCcCCcccCC----CccccccccccceeeccccccccccCcccCc-----cccceeeeeccCc
Q 039922 475 SQICTL-----RQLQAVDLSQNRFSGH----LPTCITQLNKLQQLELQENMFTGELPRNLNS-----LTALIVLNLSTNQ 540 (973)
Q Consensus 475 ~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~ 540 (973)
..+... ++|++|++++|.+++. +|..+..+++|++|+|++|++++..+..+.. .++|+.|+|++|+
T Consensus 302 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 444332 5777777777777654 4555666677777777777777655554443 5677777777777
Q ss_pred ccC----CCCccccccccccEEecCCCcCccccChhhh----c-c-cccceeccCCcCcc
Q 039922 541 LTG----TIPPELGNLAVLTSLDLSSNLLTGEIPLELT----K-L-KLNQFNISHNKLYG 590 (973)
Q Consensus 541 l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----~-l-~l~~l~l~~N~l~g 590 (973)
+++ .+|..+..+++|++|||++|++++.-...+. . . +|+.|++.+|....
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 775 5677777777777777777777754222221 1 1 46666666665543
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=4.4e-33 Score=334.95 Aligned_cols=307 Identities=14% Similarity=0.040 Sum_probs=169.2
Q ss_pred CCCCCCEEEccCCcccc----cCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccC
Q 039922 240 KLAFLSNLDLSDNFLSG----KIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSL 315 (973)
Q Consensus 240 ~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L 315 (973)
++++|++|++++|.+++ .++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.+......
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~--------- 259 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM--------- 259 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC---------
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccch---------
Confidence 44555555555555541 222233344555555555555543 3444555555555555432211000
Q ss_pred cEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCC-ccccccCCchhhhccc
Q 039922 316 ESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELP-RFLCFRNKLQCIIIFN 394 (973)
Q Consensus 316 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~ 394 (973)
+..+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|+.|++++
T Consensus 260 -----------~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~ 327 (592)
T 3ogk_B 260 -----------PEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRN 327 (592)
T ss_dssp -----------TTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEG
T ss_pred -----------HHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccC
Confidence 122234444455555555554222 444445555555555555555443222 2234455555555552
Q ss_pred CccCCCCCCccCCcceeeEEEcc-----------CCccccccC-cccCCCCCccEEEeecCcccCCCCCCCCC-CCCcce
Q 039922 395 NRFSGKIPESYGECKTLNYLRFG-----------GNELQGELP-SKFWGLPEVDFFEMYNNRFEGSISPSISN-APKLTG 461 (973)
Q Consensus 395 n~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~~L~~ 461 (973)
+...+.++.....+++|++|+++ .|.+++... ..+..+++|+.|+++.|++++..+..+.. +++|+.
T Consensus 328 ~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~ 407 (592)
T 3ogk_B 328 VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCD 407 (592)
T ss_dssp GGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCE
T ss_pred ccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcE
Confidence 22222222333455667777776 245554322 22344677777777777776555555544 667777
Q ss_pred Eeec----CCcCCCC-----CchhhhcCCcCcEEeCcCC--cccCCCcccccc-ccccceeecccccccc-ccCcccCcc
Q 039922 462 ILIN----GNNFTGE-----VPSQICTLRQLQAVDLSQN--RFSGHLPTCITQ-LNKLQQLELQENMFTG-ELPRNLNSL 528 (973)
Q Consensus 462 L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l 528 (973)
|+++ .|.+++. ++..+..+++|+.|++++| .+++..+..+.. +++|+.|+|++|++++ .++..+..+
T Consensus 408 L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 487 (592)
T 3ogk_B 408 FRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGC 487 (592)
T ss_dssp EEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCC
T ss_pred EEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcC
Confidence 7775 5666653 3344666788888888643 355544444443 6778888888888776 345556777
Q ss_pred ccceeeeeccCcccCC-CCccccccccccEEecCCCcCccc
Q 039922 529 TALIVLNLSTNQLTGT-IPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 529 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
++|+.|+|++|.+++. ++..+..+++|++|+|++|++++.
T Consensus 488 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 488 PNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp TTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 8888888888887644 334445678888888888887755
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=7.3e-33 Score=333.05 Aligned_cols=483 Identities=14% Similarity=0.073 Sum_probs=297.5
Q ss_pred CCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCccc---CcCCcCcCC------------CcCCc
Q 039922 59 PCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFN---GTLSSQSLS------------PCFHL 123 (973)
Q Consensus 59 ~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~---~~~~~~~l~------------~l~~L 123 (973)
|++|+++.+... ..+.+.++ .....+..+.++++|++|+|+++... |.+|. .++ .+++|
T Consensus 41 ck~W~~~~~~~~----~~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 41 CRRWFKIDSETR----EHVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPE-NWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp CHHHHHHHHHHC----CEEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCT-TSCCBCHHHHHHHHHHCTTC
T ss_pred hHHHHHhhhccc----cEEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccc-cccccchHHHHHHHhhCCCC
Confidence 458999964322 12333322 23333445678899999999886431 22321 112 67888
Q ss_pred cEEecccccccccCCccccCC-C-CCCEEECcCCc-CCC-CCCcccCCCCcccEEecCCcccCCc----ccccccccccc
Q 039922 124 QVLALDYNVFIGELPDFSREF-A-NLQVLDLSRNN-FSG-DIPESFGRFPVLKVLNLGGNLLSGL----IPSFLGNLTEL 195 (973)
Q Consensus 124 ~~L~L~~n~~~~~~~~~~~~l-~-~L~~L~Ls~n~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L 195 (973)
++|+|++|.+.+..+..+..+ + +|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 888888888776666666553 3 48888888876 221 1222234678888888888887765 34455677888
Q ss_pred cEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccC
Q 039922 196 THFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFD 275 (973)
Q Consensus 196 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 275 (973)
++|+|++|.++... .+.++..+.++++|++|++++|.+.+ +|..+.++++|++|+++.
T Consensus 195 ~~L~L~~n~~~~~~---------------------~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 195 EVLNFYMTEFAKIS---------------------PKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CEEECTTCCCSSCC---------------------HHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred cEEEeeccCCCccC---------------------HHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 88888888775321 12334445677888888888888885 567788888888888876
Q ss_pred CcCc---ccCchhccCCCccceeeccccccCCCChhhhhc-ccCcEEEccCCcCCCCCC-ccccCCCccceeeecccccc
Q 039922 276 NQLS---GELPESLSNLTTLLRLDISQNNLTGNLPETIAA-MSLESLNLNDNYFTGEIP-ESLASNPNLVQLKLFNNSFS 350 (973)
Q Consensus 276 n~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 350 (973)
+... +..+..+..+++|+.|+++++... .+|..+.. .+|++|+|++|.+++... ..+..+++|+.|+++++...
T Consensus 253 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~ 331 (592)
T 3ogk_B 253 LNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGD 331 (592)
T ss_dssp CCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHH
T ss_pred cccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCH
Confidence 4332 234456677778888888775332 44444433 367777777777654332 33566777888887733222
Q ss_pred CCCCCCccCCCCccceeeec-----------ccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCC
Q 039922 351 GKLPDDLGKYSNLEYFDVST-----------NDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGN 419 (973)
Q Consensus 351 ~~~p~~l~~l~~L~~L~Ls~-----------N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 419 (973)
+.++.....+++|++|++++ |.+++.... .....+++|++|+++.|
T Consensus 332 ~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~-----------------------~l~~~~~~L~~L~l~~~ 388 (592)
T 3ogk_B 332 RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI-----------------------ALAQGCQELEYMAVYVS 388 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH-----------------------HHHHHCTTCSEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH-----------------------HHHhhCccCeEEEeecC
Confidence 22333335567777777772 444432111 11223556666666666
Q ss_pred ccccccCcccCC-CCCccEEEee----cCcccCC-----CCCCCCCCCCcceEeecCC--cCCCCCchhhhc-CCcCcEE
Q 039922 420 ELQGELPSKFWG-LPEVDFFEMY----NNRFEGS-----ISPSISNAPKLTGILINGN--NFTGEVPSQICT-LRQLQAV 486 (973)
Q Consensus 420 ~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~~~~L~~L~L~~N--~l~~~~p~~~~~-l~~L~~L 486 (973)
.+++..+..+.. +++|+.|+++ .|++++. ++..+..+++|+.|+++++ .+++..+..+.. +++|++|
T Consensus 389 ~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L 468 (592)
T 3ogk_B 389 DITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWM 468 (592)
T ss_dssp CCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEE
T ss_pred CccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEe
Confidence 666555555544 6666777764 5555543 2223556778888888643 366555555544 7889999
Q ss_pred eCcCCcccC-CCccccccccccceeeccccccccc-cCcccCccccceeeeeccCcccCCCCccc-cccccccEEecCCC
Q 039922 487 DLSQNRFSG-HLPTCITQLNKLQQLELQENMFTGE-LPRNLNSLTALIVLNLSTNQLTGTIPPEL-GNLAVLTSLDLSSN 563 (973)
Q Consensus 487 ~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N 563 (973)
++++|++++ .++..+..+++|+.|+|++|++++. ++..+..+++|+.|+|++|++++.--..+ ..++.+....+..+
T Consensus 469 ~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 469 LLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred eccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 999999875 3455567889999999999998765 44455678999999999999986543334 35777777766665
Q ss_pred cCccccChhhhc-c-cccceeccCCcCcccCCC
Q 039922 564 LLTGEIPLELTK-L-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 564 ~l~~~~p~~l~~-l-~l~~l~l~~N~l~g~~p~ 594 (973)
+-....|.+-.. . ....+. .++.+.|+.|+
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 580 (592)
T 3ogk_B 549 RVPEVNQQGEIREMEHPAHIL-AYYSLAGQRTD 580 (592)
T ss_dssp ---------------CCCEEE-EEECTTCSCSC
T ss_pred cccccccccCCcCCcchhheE-eeeecCCCccC
Confidence 433222211111 0 233333 35667787764
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.4e-30 Score=278.60 Aligned_cols=258 Identities=21% Similarity=0.240 Sum_probs=179.4
Q ss_pred ccceeeeccccccCCCCCCccCCCCccceeeeccccccc--CCccccccCCchhhhcccCccCCCCCCccCCcceeeEEE
Q 039922 338 NLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGE--LPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLR 415 (973)
Q Consensus 338 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 415 (973)
+|++|+|++|++++..+..|.++++|++|+|++|+++.. .+..+..+++|++|++++|.+. .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 455555555555432222344555555555555554421 2333444455555555555554 3445566677777777
Q ss_pred ccCCccccccC-cccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCC-CCchhhhcCCcCcEEeCcCCcc
Q 039922 416 FGGNELQGELP-SKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTG-EVPSQICTLRQLQAVDLSQNRF 493 (973)
Q Consensus 416 L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l 493 (973)
+++|.+++..+ ..+..+++|+.|++++|++.+..+..+..+++|++|++++|.+++ .+|..+..+++|++|++++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 77777775554 567777777777777777777777777778888888888888876 5677788888888888888888
Q ss_pred cCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccc-cccEEecCCCcCccccCh-
Q 039922 494 SGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLA-VLTSLDLSSNLLTGEIPL- 571 (973)
Q Consensus 494 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~- 571 (973)
++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++..+.
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~ 267 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 267 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGH
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChH
Confidence 877788888888888889988888877777888888999999999999888888888884 899999999999875431
Q ss_pred -hhhcc-cccceeccCCcCcccCCCCC
Q 039922 572 -ELTKL-KLNQFNISHNKLYGEVPSDF 596 (973)
Q Consensus 572 -~l~~l-~l~~l~l~~N~l~g~~p~~~ 596 (973)
....+ ..+.+.+..+.+.+..|..+
T Consensus 268 ~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 268 SFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp HHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred HHHHHHHhhhhhhccccccccCCchhh
Confidence 12222 45566677778887777654
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=284.29 Aligned_cols=275 Identities=17% Similarity=0.227 Sum_probs=209.3
Q ss_pred ceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeeccc
Q 039922 293 LRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTND 372 (973)
Q Consensus 293 ~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 372 (973)
...++++|.++. +|..+. .+|++|++++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 34 ~~c~~~~~~l~~-iP~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (353)
T 2z80_A 34 GICKGSSGSLNS-IPSGLT-EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111 (353)
T ss_dssp SEEECCSTTCSS-CCTTCC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred eEeeCCCCCccc-cccccc-ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCc
Confidence 345556666653 333222 257777777777776555677778888888888888887767778888888888888888
Q ss_pred ccccCCccccccCCchhhhcccCccCCCCC-CccCCcceeeEEEccCC-ccccccCcccCCCCCccEEEeecCcccCCCC
Q 039922 373 FTGELPRFLCFRNKLQCIIIFNNRFSGKIP-ESYGECKTLNYLRFGGN-ELQGELPSKFWGLPEVDFFEMYNNRFEGSIS 450 (973)
Q Consensus 373 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 450 (973)
+++..+..+..+++|++|++++|++.+..+ ..+..+++|++|++++| .+.+..+..|.++++|+.|++++|++++..|
T Consensus 112 l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 112 LSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp CSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 876655567778888888888888875444 47888888999999888 5777777888889999999999999988888
Q ss_pred CCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccc---cccccceeecccccccc----ccCc
Q 039922 451 PSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCIT---QLNKLQQLELQENMFTG----ELPR 523 (973)
Q Consensus 451 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~ 523 (973)
..+..+++|++|++++|.++...+..+..+++|++|++++|++++..+..+. ....++.++|++|.+++ .+|.
T Consensus 192 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~ 271 (353)
T 2z80_A 192 KSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMK 271 (353)
T ss_dssp TTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHH
T ss_pred HHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHH
Confidence 8899999999999999998744333455688999999999999876555443 34567777777777765 4788
Q ss_pred ccCccccceeeeeccCcccCCCCcc-ccccccccEEecCCCcCccccC
Q 039922 524 NLNSLTALIVLNLSTNQLTGTIPPE-LGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 524 ~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
.+..+++|+.|+|++|+|+ .+|.. |..+++|++|+|++|++++..|
T Consensus 272 ~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 272 LLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 8888999999999999998 56655 5889999999999999998665
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=283.68 Aligned_cols=288 Identities=22% Similarity=0.300 Sum_probs=208.7
Q ss_pred cCCccCCCCCCCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEe
Q 039922 48 LGDWVRTSQQSPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLA 127 (973)
Q Consensus 48 ~~sw~~~~~~~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~ 127 (973)
...|.. ...+|.|.|+ |+-. +++++ .+|..+. ++|++|+|++|+++ .++...|.++++|++|+
T Consensus 20 ~~~~~~--~~~~C~~~~~-c~~~----------~~~l~-~iP~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~ 82 (353)
T 2z80_A 20 EESSNQ--ASLSCDRNGI-CKGS----------SGSLN-SIPSGLT--EAVKSLDLSNNRIT-YISNSDLQRCVNLQALV 82 (353)
T ss_dssp ---------CCEECTTSE-EECC----------STTCS-SCCTTCC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEE
T ss_pred ccCCCc--cCCCCCCCeE-eeCC----------CCCcc-ccccccc--ccCcEEECCCCcCc-ccCHHHhccCCCCCEEE
Confidence 445642 2346999998 7643 33444 3555544 47888899888887 46666788888888888
Q ss_pred cccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCccc-ccccccccccEeeccCcCCC
Q 039922 128 LDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIP-SFLGNLTELTHFELGYNPLK 206 (973)
Q Consensus 128 L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~ 206 (973)
|++|.+.+..|..|+.+++|++|+|++|.+++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++|..
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~- 161 (353)
T 2z80_A 83 LTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT- 161 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS-
T ss_pred CCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcc-
Confidence 88888877777778888888888888888875555557778888888888888775544 4677777777777777731
Q ss_pred CCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhc
Q 039922 207 SSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESL 286 (973)
Q Consensus 207 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l 286 (973)
+.+..+..++++++|++|++++|.+++..|..|.++++|++|++++|+++...+..+
T Consensus 162 -----------------------~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 218 (353)
T 2z80_A 162 -----------------------FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFV 218 (353)
T ss_dssp -----------------------CCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHH
T ss_pred -----------------------ccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhh
Confidence 122335567788888888888888888888888888888899998888875444445
Q ss_pred cCCCccceeeccccccCCCChhhhhc----ccCcEEEccCCcCCC----CCCccccCCCccceeeeccccccCCCCCC-c
Q 039922 287 SNLTTLLRLDISQNNLTGNLPETIAA----MSLESLNLNDNYFTG----EIPESLASNPNLVQLKLFNNSFSGKLPDD-L 357 (973)
Q Consensus 287 ~~l~~L~~L~Ls~N~l~~~~~~~~~~----~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l 357 (973)
..+++|+.|++++|.+++..+..+.. ..++.++|+++.+++ .+|+.+..+++|+.|+|++|+++ .+|.. |
T Consensus 219 ~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~ 297 (353)
T 2z80_A 219 DVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIF 297 (353)
T ss_dssp HHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred hhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHH
Confidence 56888999999999888765544432 257888888888775 46777888899999999999998 55555 5
Q ss_pred cCCCCccceeeecccccccC
Q 039922 358 GKYSNLEYFDVSTNDFTGEL 377 (973)
Q Consensus 358 ~~l~~L~~L~Ls~N~l~~~~ 377 (973)
..+++|++|+|++|++.+..
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCH
T ss_pred hcCCCCCEEEeeCCCccCcC
Confidence 88999999999999887543
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.1e-29 Score=275.87 Aligned_cols=267 Identities=19% Similarity=0.203 Sum_probs=199.4
Q ss_pred cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCC--CCCCccCCCCccceeeecccccccCCccccccCCchhhh
Q 039922 314 SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGK--LPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCII 391 (973)
Q Consensus 314 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 391 (973)
+|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|++|+|++|.++ .+|..+..+++|+.|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 455555555555533334455666666666666665522 2344455666666666666665 3444456666666666
Q ss_pred cccCccCCCCC-CccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccC-CCCCCCCCCCCcceEeecCCcC
Q 039922 392 IFNNRFSGKIP-ESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEG-SISPSISNAPKLTGILINGNNF 469 (973)
Q Consensus 392 L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~L~~N~l 469 (973)
+++|++.+..+ ..+..+++|++|++++|.+.+..+..|..+++|+.|++++|++.+ ..|..+..+++|++|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 66666665444 567888888888888888888888888888888888888888876 5788888999999999999999
Q ss_pred CCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCcc-ccceeeeeccCcccCCCC--
Q 039922 470 TGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSL-TALIVLNLSTNQLTGTIP-- 546 (973)
Q Consensus 470 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p-- 546 (973)
++..|..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|..+..+ ++|+.|+|++|.+++..+
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~ 267 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 267 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGH
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChH
Confidence 98888889999999999999999997777788999999999999999999999999988 499999999999986532
Q ss_pred ccccccccccEEecCCCcCccccChhhhcccccce
Q 039922 547 PELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQF 581 (973)
Q Consensus 547 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l 581 (973)
....-+...+.+....|.+.+..|..+....+..+
T Consensus 268 ~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~~~~~ 302 (306)
T 2z66_A 268 SFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSL 302 (306)
T ss_dssp HHHHHHHHTGGGBSCGGGCBEEESGGGTTCBGGGC
T ss_pred HHHHHHHhhhhhhccccccccCCchhhCCceeeee
Confidence 11233555666778889999999998877655443
No 306
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.3e-31 Score=311.64 Aligned_cols=233 Identities=18% Similarity=0.148 Sum_probs=178.3
Q ss_pred cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcc
Q 039922 314 SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIF 393 (973)
Q Consensus 314 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 393 (973)
+|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~--------------- 97 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV--------------- 97 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE---------------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC---------------
Confidence 57777777777777667777777777777777777775554 6777777777777777663221
Q ss_pred cCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCC
Q 039922 394 NNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEV 473 (973)
Q Consensus 394 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 473 (973)
.++|++|++++|.+++..+. .+++|+.|++++|++++..|..+..+++|+.|++++|.+++..
T Consensus 98 --------------~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 98 --------------GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp --------------CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred --------------CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 15667777777777665543 3467777777777777777778888888888888888888878
Q ss_pred chhhh-cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCcccccc
Q 039922 474 PSQIC-TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNL 552 (973)
Q Consensus 474 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 552 (973)
|..+. .+++|++|+|++|.|++. |. +..+++|+.|+|++|+|++. |..+..+++|+.|+|++|+|++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 87776 688999999999999865 33 34588999999999999964 4458889999999999999984 78889999
Q ss_pred ccccEEecCCCcCc-cccChhhhcc-cccceecc
Q 039922 553 AVLTSLDLSSNLLT-GEIPLELTKL-KLNQFNIS 584 (973)
Q Consensus 553 ~~L~~L~Ls~N~l~-~~~p~~l~~l-~l~~l~l~ 584 (973)
++|+.|+|++|+++ +.+|..+..+ .++.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 99999999999998 6777777776 67777665
No 307
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3.5e-28 Score=268.02 Aligned_cols=231 Identities=19% Similarity=0.292 Sum_probs=133.3
Q ss_pred cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcc
Q 039922 314 SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIF 393 (973)
Q Consensus 314 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 393 (973)
.++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+++
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 5777888888877 66667777777888888887777 77777777777777777777776 555555555555555555
Q ss_pred cCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCC
Q 039922 394 NNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEV 473 (973)
Q Consensus 394 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 473 (973)
+|++.+.+|..+... ..+..|.++++ |++|++++|.++ .+
T Consensus 159 ~n~~~~~~p~~~~~~---------------~~~~~~~~l~~------------------------L~~L~L~~n~l~-~l 198 (328)
T 4fcg_A 159 ACPELTELPEPLAST---------------DASGEHQGLVN------------------------LQSLRLEWTGIR-SL 198 (328)
T ss_dssp EETTCCCCCSCSEEE---------------C-CCCEEESTT------------------------CCEEEEEEECCC-CC
T ss_pred CCCCccccChhHhhc---------------cchhhhccCCC------------------------CCEEECcCCCcC-cc
Confidence 555555555443320 01112233444 444444444444 44
Q ss_pred chhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccc
Q 039922 474 PSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLA 553 (973)
Q Consensus 474 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 553 (973)
|..+..+++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+.+++
T Consensus 199 p~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~ 277 (328)
T 4fcg_A 199 PASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLT 277 (328)
T ss_dssp CGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCT
T ss_pred hHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCC
Confidence 444555555555555555555 2444455555555555555555555555555555555555555555555555555555
Q ss_pred cccEEecCCCcCccccChhhhcc-cccceeccCCcC
Q 039922 554 VLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKL 588 (973)
Q Consensus 554 ~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l 588 (973)
+|+.|+|++|++.|.+|..+..+ +++.+++..|.+
T Consensus 278 ~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 278 QLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 55555555555555555555555 555555554433
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.7e-28 Score=277.38 Aligned_cols=248 Identities=19% Similarity=0.219 Sum_probs=189.4
Q ss_pred cEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccC
Q 039922 316 ESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNN 395 (973)
Q Consensus 316 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 395 (973)
..++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34444444444 3444333 45666666666666555566666666666666666666665566666666666666666
Q ss_pred ccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeec-CcccCCCCCCCCCCCCcceEeecCCcCCCCCc
Q 039922 396 RFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYN-NRFEGSISPSISNAPKLTGILINGNNFTGEVP 474 (973)
Q Consensus 396 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 474 (973)
++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++ |.+....+..|..+++|++|++++|+++ .+|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 66655566777888888888888888877777888888888888887 4444444557888888888888888888 445
Q ss_pred hhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCcccccccc
Q 039922 475 SQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAV 554 (973)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 554 (973)
.+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 4788899999999999999888899999999999999999999888899999999999999999999777778889999
Q ss_pred ccEEecCCCcCccc
Q 039922 555 LTSLDLSSNLLTGE 568 (973)
Q Consensus 555 L~~L~Ls~N~l~~~ 568 (973)
|+.|+|++|++...
T Consensus 281 L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 281 LERIHLHHNPWNCN 294 (440)
T ss_dssp CCEEECCSSCEECS
T ss_pred CCEEEcCCCCccCC
Confidence 99999999998753
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=7.1e-28 Score=278.73 Aligned_cols=230 Identities=18% Similarity=0.200 Sum_probs=172.3
Q ss_pred CccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEc
Q 039922 337 PNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRF 416 (973)
Q Consensus 337 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 416 (973)
++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 34555555555555444555555555555555555555555555555555555555555555555556777777777777
Q ss_pred cCCccccccCcccCCCCCccEEEeec-CcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccC
Q 039922 417 GGNELQGELPSKFWGLPEVDFFEMYN-NRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSG 495 (973)
Q Consensus 417 ~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 495 (973)
++|++++..+..|.++++|+.|++++ |.+....+..+..+++|+.|++++|++++. | .+..+++|++|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 77777777677777788888888877 445544455678888888888888888843 4 47788899999999999998
Q ss_pred CCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccc
Q 039922 496 HLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 496 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 8899999999999999999999988899999999999999999999977777888999999999999998754
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.9e-28 Score=263.81 Aligned_cols=236 Identities=19% Similarity=0.184 Sum_probs=133.8
Q ss_pred CccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEc
Q 039922 337 PNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRF 416 (973)
Q Consensus 337 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 416 (973)
++|++|+|++|.+++..+..|..+++|++|+|++|++++..|.. +..+++|++|++
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~------------------------~~~l~~L~~L~l 87 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAA------------------------FTGLALLEQLDL 87 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT------------------------TTTCTTCCEEEC
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhh------------------------cCCccCCCEEeC
Confidence 35555555555555444444555555555555555554333333 333334444444
Q ss_pred cCCc-cccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccC
Q 039922 417 GGNE-LQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSG 495 (973)
Q Consensus 417 ~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 495 (973)
++|. +++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|++|+|++|++++
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc
Confidence 4443 333334444444444444444444444444555555555555555555554444556666666666666666665
Q ss_pred CCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhc
Q 039922 496 HLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTK 575 (973)
Q Consensus 496 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 575 (973)
..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..-..
T Consensus 168 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~ 247 (285)
T 1ozn_A 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLW 247 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHH
T ss_pred cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHH
Confidence 44455666777777777777777666777777777777777777777555555777777777777777776554432111
Q ss_pred ccccceeccCCcCcccCCCCC
Q 039922 576 LKLNQFNISHNKLYGEVPSDF 596 (973)
Q Consensus 576 l~l~~l~l~~N~l~g~~p~~~ 596 (973)
-.++.+..+.|.+.+..|..+
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHCCSEECCCBEEESGGG
T ss_pred HHHHhcccccCccccCCchHh
Confidence 134555666677777766544
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.9e-28 Score=261.96 Aligned_cols=209 Identities=21% Similarity=0.253 Sum_probs=186.9
Q ss_pred CchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCc-ccCCCCCCCCCCCCcceEee
Q 039922 386 KLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNR-FEGSISPSISNAPKLTGILI 464 (973)
Q Consensus 386 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~L~~L~L 464 (973)
+|+.|++++|++.+..+..|..+++|++|++++|.+++..+..|.++++|+.|++++|+ ++...+..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34444444444444555678889999999999999999989999999999999999998 88877899999999999999
Q ss_pred cCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCC
Q 039922 465 NGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGT 544 (973)
Q Consensus 465 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 544 (973)
++|.+++..|..+..+++|++|++++|++++..+..|+.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 99999988899999999999999999999977777899999999999999999977777899999999999999999988
Q ss_pred CCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCCC
Q 039922 545 IPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 545 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~ 594 (973)
.|..|..+++|+.|+|++|++++..|..+..+ .|+.|++++|++.+..+.
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 89999999999999999999997666678888 899999999999986653
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.3e-29 Score=274.65 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=174.2
Q ss_pred hccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCC-CCCCcccc-------CCCccceeeeccccccCCCCCC
Q 039922 285 SLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFT-GEIPESLA-------SNPNLVQLKLFNNSFSGKLPDD 356 (973)
Q Consensus 285 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 356 (973)
.++..++|+.|++++|.+ .+|..+... |+.|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|..
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 345667888999999988 556554443 888888888884 45665554 6788888888888888888877
Q ss_pred c--cCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCC
Q 039922 357 L--GKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPE 434 (973)
Q Consensus 357 l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 434 (973)
+ ..+++|++|+|++|++++. |..+..+.. ..+++|++|++++|++++..+..|..+++
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~-------------------~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQ-------------------WLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT-------------------TCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHH-------------------hhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 6 7888888888888888866 555554400 00134444444444444444444444444
Q ss_pred ccEEEeecCcccCC--CCCCC--CCCCCcceEeecCCcCCC--CCc-hhhhcCCcCcEEeCcCCcccCCCc-cccccccc
Q 039922 435 VDFFEMYNNRFEGS--ISPSI--SNAPKLTGILINGNNFTG--EVP-SQICTLRQLQAVDLSQNRFSGHLP-TCITQLNK 506 (973)
Q Consensus 435 L~~L~L~~N~l~~~--~~~~~--~~~~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 506 (973)
|+.|++++|++.+. .+..+ ..+++|++|++++|++++ .++ ..+..+++|++|+|++|++++.+| ..+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 44444444444332 11222 566677777777777763 122 334567888888888888887664 45667788
Q ss_pred cceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCcc
Q 039922 507 LQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTG 567 (973)
Q Consensus 507 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (973)
|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|++|+|++|++++
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 888888888888 7777776 8888888888888864 65 8888888888888888875
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.9e-29 Score=275.13 Aligned_cols=249 Identities=18% Similarity=0.193 Sum_probs=196.3
Q ss_pred ccCCCccceeeeccccccCCCCCCccCCCCccceeeeccccc-ccCCcccc-------ccCCchhhhcccCccCCCCCCc
Q 039922 333 LASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFT-GELPRFLC-------FRNKLQCIIIFNNRFSGKIPES 404 (973)
Q Consensus 333 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~-------~l~~L~~L~L~~n~l~~~~p~~ 404 (973)
++..++|+.|++++|.+ .+|..+... |+.|+|++|+++ ..+|..+. .+++|++|++++|++.+.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34445556666666665 444444333 566666666662 34444443 4566666666666666667776
Q ss_pred c--CCcceeeEEEccCCccccccCcccCCC-----CCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCC--Cch
Q 039922 405 Y--GECKTLNYLRFGGNELQGELPSKFWGL-----PEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGE--VPS 475 (973)
Q Consensus 405 ~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~--~p~ 475 (973)
+ +.+++|++|++++|++++. |..+..+ ++|++|++++|++++..+..+..+++|++|++++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 8889999999999999877 7777776 9999999999999999999999999999999999998865 344
Q ss_pred hh--hcCCcCcEEeCcCCcccC--CCc-cccccccccceeeccccccccccC-cccCccccceeeeeccCcccCCCCccc
Q 039922 476 QI--CTLRQLQAVDLSQNRFSG--HLP-TCITQLNKLQQLELQENMFTGELP-RNLNSLTALIVLNLSTNQLTGTIPPEL 549 (973)
Q Consensus 476 ~~--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 549 (973)
.+ ..+++|++|+|++|++++ .++ ..+..+++|+.|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 55 889999999999999983 122 344577999999999999998876 56777999999999999999 788888
Q ss_pred cccccccEEecCCCcCccccChhhhcc-cccceeccCCcCccc
Q 039922 550 GNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGE 591 (973)
Q Consensus 550 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~ 591 (973)
. ++|++|||++|++++. |. +..+ .|+.|++++|++++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 7 8999999999999965 76 7777 899999999999863
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=275.28 Aligned_cols=250 Identities=19% Similarity=0.212 Sum_probs=226.5
Q ss_pred ccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEcc
Q 039922 338 NLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFG 417 (973)
Q Consensus 338 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 417 (973)
....++.+++.++ .+|..+. ++++.|+|++|++++..+..|..+++|+.|+|++|++.+..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678999999998 7787665 789999999999999999999999999999999999998888999999999999999
Q ss_pred CCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCc-hhhhcCCcCcEEeCcCCcccCC
Q 039922 418 GNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVP-SQICTLRQLQAVDLSQNRFSGH 496 (973)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 496 (973)
+|++++..+..|..+++|+.|+|++|+++...+..|..+++|+.|++++|+..+.++ ..|..+++|++|+|++|+++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 999998888899999999999999999998888899999999999999955444444 47899999999999999998 5
Q ss_pred CccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc
Q 039922 497 LPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL 576 (973)
Q Consensus 497 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 576 (973)
+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|||++|++++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 66 48899999999999999999889999999999999999999998889999999999999999999997666677777
Q ss_pred -cccceeccCCcCcccC
Q 039922 577 -KLNQFNISHNKLYGEV 592 (973)
Q Consensus 577 -~l~~l~l~~N~l~g~~ 592 (973)
.|+.|++++|++.+..
T Consensus 279 ~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TTCCEEECCSSCEECSS
T ss_pred cCCCEEEcCCCCccCCC
Confidence 8999999999887643
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=4.4e-28 Score=287.21 Aligned_cols=291 Identities=24% Similarity=0.331 Sum_probs=175.5
Q ss_pred CCCCCccCCccCCCCCCCCccceeEEc------CCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcC
Q 039922 42 DDPNRKLGDWVRTSQQSPCNWTGITCE------TQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQ 115 (973)
Q Consensus 42 ~d~~~~~~sw~~~~~~~~C~w~gv~c~------~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 115 (973)
.|....+++|.. ..+||.|+|..|. -....++.|++++++++ .+|..+. ++|++|+|++|+++ .+|.
T Consensus 6 ~~~~~~w~~W~~--~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~- 78 (622)
T 3g06_A 6 AEYDAVWSAWRR--AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA- 78 (622)
T ss_dssp ----CHHHHHHH--TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC-
T ss_pred HHHHHHHHHHHh--cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC-
Confidence 345667888975 3468999775421 11123788999999998 6787766 89999999999998 5664
Q ss_pred cCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccc
Q 039922 116 SLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTEL 195 (973)
Q Consensus 116 ~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 195 (973)
.+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|+++++ |.. +++|
T Consensus 79 ---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~l-p~~---l~~L 143 (622)
T 3g06_A 79 ---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSL-PVL---PPGL 143 (622)
T ss_dssp ---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCC-CCC---CTTC
T ss_pred ---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcC-CCC---CCCC
Confidence 57889999999999874 554 67899999999999985 454 578899999999999864 543 4889
Q ss_pred cEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccC
Q 039922 196 THFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFD 275 (973)
Q Consensus 196 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 275 (973)
++|+|++|+++.+ |.. +++|+.|++++|.+.+ +| ..+++|+.|++++|.+++ +|.. +++|+.|++++
T Consensus 144 ~~L~Ls~N~l~~l--~~~---~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~ 210 (622)
T 3g06_A 144 QELSVSDNQLASL--PAL---PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYN 210 (622)
T ss_dssp CEEECCSSCCSCC--CCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred CEEECcCCcCCCc--CCc---cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcC
Confidence 9999999988763 322 2344455555555443 33 234455555555555553 2221 24455555555
Q ss_pred CcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCC
Q 039922 276 NQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPD 355 (973)
Q Consensus 276 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 355 (973)
|.++ .+|.. +++|+.|+|++|++++ +|. ...+|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|.
T Consensus 211 N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp~--~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~ 278 (622)
T 3g06_A 211 NRLT-SLPAL---PSGLKELIVSGNRLTS-LPV--LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPE 278 (622)
T ss_dssp SCCS-SCCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCG
T ss_pred Cccc-ccCCC---CCCCCEEEccCCccCc-CCC--CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCH
Confidence 5555 22321 2445555555555543 221 1124555555555554 2332 2344555555555554 4444
Q ss_pred CccCCCCccceeeecccccccCCc
Q 039922 356 DLGKYSNLEYFDVSTNDFTGELPR 379 (973)
Q Consensus 356 ~l~~l~~L~~L~Ls~N~l~~~~~~ 379 (973)
.+.++++|+.|+|++|++++..|.
T Consensus 279 ~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 279 SLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp GGGGSCTTCEEECCSCCCCHHHHH
T ss_pred HHhhccccCEEEecCCCCCCcCHH
Confidence 455555555555555555444443
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.6e-27 Score=275.73 Aligned_cols=251 Identities=20% Similarity=0.207 Sum_probs=226.8
Q ss_pred ccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEcc
Q 039922 338 NLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFG 417 (973)
Q Consensus 338 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 417 (973)
....++.+++.++ .+|..+. +++++|+|++|++++..+..|..+++|+.|+|++|++.+..+..|..+++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4567888888888 6776654 689999999999999999999999999999999999999989999999999999999
Q ss_pred CCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCc-hhhhcCCcCcEEeCcCCcccCC
Q 039922 418 GNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVP-SQICTLRQLQAVDLSQNRFSGH 496 (973)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 496 (973)
+|++++..+..|..+++|+.|+|++|+++...+..+..+++|+.|++++|+..+.++ ..|..+++|++|+|++|++++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-
Confidence 999998888889999999999999999998888899999999999999954444444 468999999999999999995
Q ss_pred CccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc
Q 039922 497 LPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL 576 (973)
Q Consensus 497 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 576 (973)
+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+
T Consensus 211 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 211 MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 55 58899999999999999999999999999999999999999998889999999999999999999997666667777
Q ss_pred -cccceeccCCcCcccCC
Q 039922 577 -KLNQFNISHNKLYGEVP 593 (973)
Q Consensus 577 -~l~~l~l~~N~l~g~~p 593 (973)
+|+.|++++|++.+...
T Consensus 290 ~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTCCEEECCSSCEECSTT
T ss_pred cCCCEEEccCCCcCCCCC
Confidence 89999999999876543
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.9e-29 Score=274.77 Aligned_cols=266 Identities=18% Similarity=0.161 Sum_probs=204.2
Q ss_pred ccceeeccccccCCCChhhhhcc-cCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeee
Q 039922 291 TLLRLDISQNNLTGNLPETIAAM-SLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVS 369 (973)
Q Consensus 291 ~L~~L~Ls~N~l~~~~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 369 (973)
+++..+++.+.+.......+... +|++|+|++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45566777777764444444433 68888888888887777788888888888888888876554 7778888888888
Q ss_pred cccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCC
Q 039922 370 TNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSI 449 (973)
Q Consensus 370 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 449 (973)
+|++++.. ..++|++|++++|++++..+.. +++|+.|++++|++++..
T Consensus 89 ~n~l~~l~-----------------------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 89 NNYVQELL-----------------------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLR 136 (317)
T ss_dssp SSEEEEEE-----------------------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGG
T ss_pred CCcccccc-----------------------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCcc
Confidence 88776322 1245666666666666554433 456777777777777766
Q ss_pred CCCCCCCCCcceEeecCCcCCCCCchhhh-cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCcc
Q 039922 450 SPSISNAPKLTGILINGNNFTGEVPSQIC-TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSL 528 (973)
Q Consensus 450 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 528 (973)
+..+..+++|++|++++|.+++..+..+. .+++|++|+|++|++++. |. ...+++|++|+|++|++++ +|..+..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 213 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSA 213 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGG
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhccc
Confidence 77778888888888888888877777664 688999999999999854 43 3358999999999999995 55568999
Q ss_pred ccceeeeeccCcccCCCCccccccccccEEecCCCcCc-cccChhhhcc-cccceecc-CCcCcccCCC
Q 039922 529 TALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLT-GEIPLELTKL-KLNQFNIS-HNKLYGEVPS 594 (973)
Q Consensus 529 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l-~l~~l~l~-~N~l~g~~p~ 594 (973)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+ .|+.++++ .+.++|..|.
T Consensus 214 ~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999998 58888999999999999999999 7788888888 89999998 5566766554
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.7e-26 Score=273.69 Aligned_cols=268 Identities=26% Similarity=0.351 Sum_probs=195.4
Q ss_pred CCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEcc
Q 039922 242 AFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLN 321 (973)
Q Consensus 242 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~ 321 (973)
.+++.|++++|.++ .+|..+. ++|+.|++++|+++ .+|. .+++|+.|+|++|++++ +|. ...+|++|+|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls 109 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV--LPPGLLELSIF 109 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC--CCTTCCEEEEC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC--CCCCCCEEECc
Confidence 35889999999998 6676665 78999999999988 4554 46788888888888874 443 33467777777
Q ss_pred CCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCC
Q 039922 322 DNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKI 401 (973)
Q Consensus 322 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 401 (973)
+|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++. |
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~----------------------- 157 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-P----------------------- 157 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-C-----------------------
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-C-----------------------
Confidence 777774 333 45677777777777773 4443 36677777777766632 2
Q ss_pred CCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCC
Q 039922 402 PESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLR 481 (973)
Q Consensus 402 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 481 (973)
. .+.+|+.|++++|.+++ +| ..+++|+.|++++|++++. |. .+++|+.|++++|.++ .+|.. ++
T Consensus 158 -~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~-~l~~~---~~ 221 (622)
T 3g06_A 158 -A---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-PT---LPSELYKLWAYNNRLT-SLPAL---PS 221 (622)
T ss_dssp -C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS-SCCCC---CT
T ss_pred -C---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-CC---ccchhhEEECcCCccc-ccCCC---CC
Confidence 1 12345566666666654 22 3346666666666666642 22 2367788888888887 44432 47
Q ss_pred cCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecC
Q 039922 482 QLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLS 561 (973)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 561 (973)
+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 89999999999985 66 45678999999999998 5666 6788999999999999 789999999999999999
Q ss_pred CCcCccccChhhhcc
Q 039922 562 SNLLTGEIPLELTKL 576 (973)
Q Consensus 562 ~N~l~~~~p~~l~~l 576 (973)
+|++++.+|..+..+
T Consensus 293 ~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 293 GNPLSERTLQALREI 307 (622)
T ss_dssp SCCCCHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhc
Confidence 999999999887765
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.6e-29 Score=272.95 Aligned_cols=269 Identities=18% Similarity=0.210 Sum_probs=205.2
Q ss_pred ccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEec
Q 039922 97 TLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNL 176 (973)
Q Consensus 97 ~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 176 (973)
.++.++++.+.+. ..+...+..+++|++|+|++|.+.+..|..+..+++|++|+|++|.+++..| +..+++|++|+|
T Consensus 11 ~l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 3456677777775 3334455666777788888777777766777777778888888777775543 777777777777
Q ss_pred CCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccc
Q 039922 177 GGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSG 256 (973)
Q Consensus 177 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 256 (973)
++|++++.. ..++|++|++++|+++. ..+. .+++|++|++++|++++
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~-------------------------~~~~---~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISR-------------------------VSCS---RGQGKKNIYLANNKITM 134 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSE-------------------------EEEC---CCSSCEEEECCSSCCCS
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCC-------------------------cCcc---ccCCCCEEECCCCCCCC
Confidence 777777432 33677777777777653 2222 35678899999999988
Q ss_pred cCCcCCCCCCCCCEEEccCCcCcccCchhcc-CCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccC
Q 039922 257 KIPHSFSGLASIEQIELFDNQLSGELPESLS-NLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLAS 335 (973)
Q Consensus 257 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 335 (973)
..+..|..+++|++|++++|++++..+..+. .+++|+.|+|++|.+++. +......+|++|+|++|++++ +|..+..
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~ 212 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQS 212 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCCc-chhhhcc
Confidence 8788888889999999999999877777664 688999999999998854 444445579999999999985 4555888
Q ss_pred CCccceeeeccccccCCCCCCccCCCCccceeeeccccc-ccCCccccccCCchhhhcc-cCccCCCCCCc
Q 039922 336 NPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFT-GELPRFLCFRNKLQCIIIF-NNRFSGKIPES 404 (973)
Q Consensus 336 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~-~n~l~~~~p~~ 404 (973)
+++|+.|+|++|+++ .+|..+..+++|+.|++++|++. +.+|.++..+++|+.+++. .+.+.+..|..
T Consensus 213 l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 213 AAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp GTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred cCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 999999999999998 57888899999999999999998 7888888899999999998 44455555443
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=8e-31 Score=315.41 Aligned_cols=444 Identities=16% Similarity=0.133 Sum_probs=218.1
Q ss_pred CCccceeEEcCCCCceeEeecCCCccCCCCC-CCccCccccceeccCCCcccCcCC---c-----------CcCCCcCCc
Q 039922 59 PCNWTGITCETQNQSVDGIDLSGFDLSGGFP-NGFCRIRTLRNLNLSDNYFNGTLS---S-----------QSLSPCFHL 123 (973)
Q Consensus 59 ~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~-~~~~~l~~L~~L~Ls~n~l~~~~~---~-----------~~l~~l~~L 123 (973)
|++|+++.. .....++++++. +..| ..+.++++|++|+|++|.....+. . .....+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 568999822 123455665543 2223 245678899999999886322111 0 012345667
Q ss_pred cEEecccccccccCCcccc-CCCCCCEEECcCC-cCCCC-CCcccCCCCcccEEecCCcccCCccccccc----cccccc
Q 039922 124 QVLALDYNVFIGELPDFSR-EFANLQVLDLSRN-NFSGD-IPESFGRFPVLKVLNLGGNLLSGLIPSFLG----NLTELT 196 (973)
Q Consensus 124 ~~L~L~~n~~~~~~~~~~~-~l~~L~~L~Ls~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~ 196 (973)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 7777776666655554443 4667777777666 34321 333334566677777776666654433333 445666
Q ss_pred EeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCC-cccccCCcCCCCCCCCCEEEccC
Q 039922 197 HFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDN-FLSGKIPHSFSGLASIEQIELFD 275 (973)
Q Consensus 197 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~L~~ 275 (973)
+|++++|. ..+. .. .++..+.++++|++|++++| .+++ ++..+..+++|++|++..
T Consensus 188 ~L~l~~~~-~~~~-------~~--------------~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 188 SLNISCLA-SEVS-------FS--------------ALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGG 244 (594)
T ss_dssp EEECTTCC-SCCC-------HH--------------HHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSB
T ss_pred EEEecccC-CcCC-------HH--------------HHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccc
Confidence 66666664 1100 00 01111233566667777666 3333 555556666666666443
Q ss_pred C-------cCcccCchhccCCCcccee-eccccccCCCChhhhh-cccCcEEEccCCcCCCCC-CccccCCCccceeeec
Q 039922 276 N-------QLSGELPESLSNLTTLLRL-DISQNNLTGNLPETIA-AMSLESLNLNDNYFTGEI-PESLASNPNLVQLKLF 345 (973)
Q Consensus 276 n-------~l~~~~p~~l~~l~~L~~L-~Ls~N~l~~~~~~~~~-~~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~ 345 (973)
+ .+.+ ++..+.++++|+.| .+...... .++..+. ..+|++|+|++|.+++.. +..+..+++|+.|+++
T Consensus 245 ~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~ 322 (594)
T 2p1m_B 245 YTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVL 322 (594)
T ss_dssp CCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred ccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCc
Confidence 3 2332 33355666666666 33222111 1222221 224555555555544221 1123344555555555
Q ss_pred cccccCC-CCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCcc-CCcceeeEEEccCCcccc
Q 039922 346 NNSFSGK-LPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESY-GECKTLNYLRFGGNELQG 423 (973)
Q Consensus 346 ~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~ 423 (973)
+| +++. ++.....+++|++|+++++.-.| ....+.+++.....+ ..+++|++|.++.|.+++
T Consensus 323 ~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g---------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~ 386 (594)
T 2p1m_B 323 DY-IEDAGLEVLASTCKDLRELRVFPSEPFV---------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTN 386 (594)
T ss_dssp GG-GHHHHHHHHHHHCTTCCEEEEECSCTTC---------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCH
T ss_pred Cc-cCHHHHHHHHHhCCCCCEEEEecCcccc---------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCH
Confidence 55 2211 11111224445555543321000 001111111111111 124455555555555544
Q ss_pred ccCcccC-CCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCC-----CCchhhhcCCcCcEEeCcCCcccCCC
Q 039922 424 ELPSKFW-GLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTG-----EVPSQICTLRQLQAVDLSQNRFSGHL 497 (973)
Q Consensus 424 ~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~ 497 (973)
.....+. .+++|+.|+++.|...+ -|++++ .++..+..+++|+.|+|++ .+++..
T Consensus 387 ~~~~~l~~~~~~L~~L~L~~~~~~~------------------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 387 AALITIARNRPNMTRFRLCIIEPKA------------------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEEESSTTC------------------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred HHHHHHHhhCCCcceeEeecccCCC------------------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 3333332 24444444444111000 023331 1122245567777777766 555444
Q ss_pred cccccc-ccccceeeccccccccccCccc-CccccceeeeeccCcccCCCCc-cccccccccEEecCCCcCccc
Q 039922 498 PTCITQ-LNKLQQLELQENMFTGELPRNL-NSLTALIVLNLSTNQLTGTIPP-ELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 498 p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|++++|+++..
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 521 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFG 521 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHH
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHH
Confidence 444544 6777777777777766555444 5577777777777777543333 334577788888888777543
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1e-25 Score=241.51 Aligned_cols=218 Identities=27% Similarity=0.367 Sum_probs=171.8
Q ss_pred CCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccC
Q 039922 58 SPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGEL 137 (973)
Q Consensus 58 ~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~ 137 (973)
++|.|.|+.|.-.. .+..+++++++++. +|..+. ++|++|+|++|+++ .+++..|.++++|++|+|++|.+.+..
T Consensus 3 ~~C~~~~~~C~c~~-~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 3 ALCKKDGGVCSCNN-NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCBGGGTCSBEEET-TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred ccCCCCCCCCEeCC-CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 67999999996532 46679999999885 666554 67899999999988 566677888888888888888888766
Q ss_pred CccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCc
Q 039922 138 PDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNL 217 (973)
Q Consensus 138 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 217 (973)
+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|+++++|++|+|++|.++.++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------- 149 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP-------- 149 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC--------
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC--------
Confidence 677788888888888888888777777888888888888888888887777888888888888888776421
Q ss_pred chhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeec
Q 039922 218 SKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDI 297 (973)
Q Consensus 218 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 297 (973)
+..++.+++|++|+|++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|+|
T Consensus 150 -----------------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 150 -----------------KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp -----------------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred -----------------HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 234566777888888888888766667778888888888888887666666777778888888
Q ss_pred cccccCCC
Q 039922 298 SQNNLTGN 305 (973)
Q Consensus 298 s~N~l~~~ 305 (973)
++|++...
T Consensus 213 ~~N~~~c~ 220 (270)
T 2o6q_A 213 QENPWDCT 220 (270)
T ss_dssp CSSCBCCS
T ss_pred cCCCeeCC
Confidence 88777643
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=2.5e-27 Score=279.19 Aligned_cols=187 Identities=19% Similarity=0.141 Sum_probs=131.1
Q ss_pred cccccCCeeEEEEEE-CCCCEEEEEEecCCCCC--------chhHHHHHHHHHHHhcC-CCCCeeeEEeEEecCCeeEEE
Q 039922 689 LIGSGGSCRVYKVKL-KSGETVAVKRLLGGTHK--------PETETVFRSEIETLGRV-RHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 689 ~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 758 (973)
..+.|+.|.+..++. .-|+.||+|++.+.... +...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456677776666443 35899999999654211 22345689999999999 699999999999999999999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||++|++|.+++...+ .++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+++....
T Consensus 321 MEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999998653 35543 5899999999999999 999999999999999999999999999987644
Q ss_pred cCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCC
Q 039922 839 QEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRP 889 (973)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p 889 (973)
... .....+||++|+|||++.+ .+..++|+||+|++.+++.++..+
T Consensus 392 ~~~----~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCS----WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --C----CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCc----cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 322 2345679999999999865 467789999999998887765544
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.9e-27 Score=273.86 Aligned_cols=237 Identities=19% Similarity=0.209 Sum_probs=179.2
Q ss_pred CcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEe
Q 039922 119 PCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHF 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 198 (973)
.+++|++|+|++|.+.+..|..|+.+++|++|+|++|.+++.+| ++.+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44577777777777777767777777777777777777776554 7777777777777777775432 2677777
Q ss_pred eccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcC
Q 039922 199 ELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQL 278 (973)
Q Consensus 199 ~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 278 (973)
++++|.++.. .+. .+++|+.|+|++|.+++..|..|+++++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~-------------------------~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 156 (487)
T 3oja_A 105 HAANNNISRV-------------------------SCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156 (487)
T ss_dssp ECCSSCCCCE-------------------------EEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCC
T ss_pred ECcCCcCCCC-------------------------Ccc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCC
Confidence 7777776542 222 346788888888888887788888888888888888888
Q ss_pred cccCchhcc-CCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCc
Q 039922 279 SGELPESLS-NLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDL 357 (973)
Q Consensus 279 ~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 357 (973)
++..|..+. .+++|+.|+|++|.+++. +......+|+.|+|++|.+++. |..+..+++|+.|+|++|.+++ +|..+
T Consensus 157 ~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 877777775 688888888888888755 3333455788888888888864 4458888899999999999984 77778
Q ss_pred cCCCCccceeeeccccc-ccCCccccccCCchhhhcc
Q 039922 358 GKYSNLEYFDVSTNDFT-GELPRFLCFRNKLQCIIIF 393 (973)
Q Consensus 358 ~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~ 393 (973)
..+++|+.|++++|.+. +.+|.++..++.|+.+++.
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88899999999999887 6777778888888888776
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.8e-25 Score=239.08 Aligned_cols=225 Identities=21% Similarity=0.228 Sum_probs=165.2
Q ss_pred EEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCcc
Q 039922 318 LNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRF 397 (973)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 397 (973)
.+..+..++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|+++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----------------------- 65 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ----------------------- 65 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-----------------------
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-----------------------
Confidence 444444554 3444332 35666666666666554445566666666666666555
Q ss_pred CCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCC-Cchh
Q 039922 398 SGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGE-VPSQ 476 (973)
Q Consensus 398 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~-~p~~ 476 (973)
+..+..+..+++|++|++++|.+++..+..|.++++|+.|++++|++.+..+..+..+++|++|++++|.+++. +|..
T Consensus 66 -~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 66 -TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp -EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred -ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchh
Confidence 33445566777777777777777777777777778888888888877777676788888888888888888763 5888
Q ss_pred hhcCCcCcEEeCcCCcccCCCccccccccccc----eeeccccccccccCcccCccccceeeeeccCcccCCCCcccccc
Q 039922 477 ICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQ----QLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNL 552 (973)
Q Consensus 477 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 552 (973)
+..+++|++|+|++|++++..+..+..+++|+ .|++++|++++..+..+.. .+|+.|+|++|++++..+..|..+
T Consensus 145 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l 223 (276)
T 2z62_A 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRL 223 (276)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTC
T ss_pred hccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccc
Confidence 88899999999999999877777888888877 8889999998655555544 479999999999987666667889
Q ss_pred ccccEEecCCCcCccccC
Q 039922 553 AVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 553 ~~L~~L~Ls~N~l~~~~p 570 (973)
++|+.|+|++|++++..|
T Consensus 224 ~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 224 TSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CSCCEEECCSSCBCCCTT
T ss_pred ccccEEEccCCcccccCC
Confidence 999999999999987665
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=3.3e-29 Score=301.29 Aligned_cols=133 Identities=14% Similarity=0.186 Sum_probs=103.8
Q ss_pred CCCcceEeecCCcCCCCCchhhh-cCCcCcEEeCc--C----CcccCC-----CccccccccccceeeccccccccccCc
Q 039922 456 APKLTGILINGNNFTGEVPSQIC-TLRQLQAVDLS--Q----NRFSGH-----LPTCITQLNKLQQLELQENMFTGELPR 523 (973)
Q Consensus 456 ~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 523 (973)
+++|+.|.++.|++++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+|++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 67788888888888766666665 58899999999 4 566632 122366789999999988 78777777
Q ss_pred ccCc-cccceeeeeccCcccCCCCccc-cccccccEEecCCCcCccccChhh-hcc-cccceeccCCcCc
Q 039922 524 NLNS-LTALIVLNLSTNQLTGTIPPEL-GNLAVLTSLDLSSNLLTGEIPLEL-TKL-KLNQFNISHNKLY 589 (973)
Q Consensus 524 ~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l-~~l-~l~~l~l~~N~l~ 589 (973)
.+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+..+ ..+ +|+.|++++|+++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 7766 8999999999999986655555 679999999999999976655544 335 8999999999884
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.7e-25 Score=238.07 Aligned_cols=214 Identities=24% Similarity=0.230 Sum_probs=156.5
Q ss_pred CCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCC
Q 039922 88 FPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGR 167 (973)
Q Consensus 88 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 167 (973)
+|..+. ++|++|+|++|+++ .++...|.++++|++|+|++|.+.+..+..+..+++|++|+|++|.+++..|..|.+
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred cCCCCC--CCccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 444443 47899999999998 556668899999999999999998888888999999999999999999888888999
Q ss_pred CCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCC--
Q 039922 168 FPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLS-- 245 (973)
Q Consensus 168 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~-- 245 (973)
+++|++|++++|++++..+..++++++|++|++++|.++...+|..++++++|++|++++|.+.+..+..+..+.+|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 999999999999999887778999999999999999988766666666666666666666666555555555555554
Q ss_pred --EEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCC
Q 039922 246 --NLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGN 305 (973)
Q Consensus 246 --~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 305 (973)
.|++++|.+++..+..+.. .+|++|++++|++++..+..+..+++|+.|++++|+++..
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 5666666666444443333 2566666666666544444455555566666665555543
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=6e-25 Score=235.63 Aligned_cols=203 Identities=20% Similarity=0.240 Sum_probs=164.0
Q ss_pred CCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEee
Q 039922 385 NKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILI 464 (973)
Q Consensus 385 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 464 (973)
++|+.|++++|.+.. ...+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..+..+..+++|++|++
T Consensus 41 ~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 334444444444331 23466677788888888877753 36777888888888888888777777888888888888
Q ss_pred cCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCC
Q 039922 465 NGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGT 544 (973)
Q Consensus 465 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 544 (973)
++|++++..+..+..+++|++|++++|++++..|..|+.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 88888877777788899999999999999977777788999999999999999987778889999999999999999987
Q ss_pred CCccccccccccEEecCCCcCccccChhhhcccccceeccCCcCcccCCCCCc
Q 039922 545 IPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHNKLYGEVPSDFD 597 (973)
Q Consensus 545 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N~l~g~~p~~~~ 597 (973)
.|..|..+++|+.|+|++|++++..| .++.++++.|+++|.+|..+.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTT------TTHHHHHHHHHTGGGBBCTTS
T ss_pred CHHHHhCCcCCCEEEccCCCccccCc------HHHHHHHHHHhCCCcccCccc
Confidence 78788999999999999999997766 467888999999999998653
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.2e-23 Score=225.38 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=152.1
Q ss_pred ccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEcc
Q 039922 338 NLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFG 417 (973)
Q Consensus 338 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 417 (973)
+.+.+++++|.++ .+|..+. +++++|+|++|+++ +..+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~------------------------~~~~~~~~~l~~L~~L~l~ 69 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLS------------------------SLPSKAFHRLTKLRLLYLN 69 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCS------------------------CCCTTSSSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCC------------------------eeCHHHhcCCCCCCEEECC
Confidence 4556666666666 4554433 45556666655555 3344456666777777777
Q ss_pred CCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCC
Q 039922 418 GNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHL 497 (973)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 497 (973)
+|.+++..+..|.++++|+.|++++|++++..+..+..+++|++|++++|.+++..+..|..+++|++|+|++|++++..
T Consensus 70 ~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 70 DNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 77777666666677777777777777777666667777788888888888888777777788888888888888888666
Q ss_pred ccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccC
Q 039922 498 PTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 498 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++..-+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 6668888888888888888887777778888888888888888886666678888888899999988876543
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.8e-25 Score=234.74 Aligned_cols=225 Identities=19% Similarity=0.196 Sum_probs=169.5
Q ss_pred CcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhccc
Q 039922 315 LESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFN 394 (973)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 394 (973)
+..+++..+.+.+. ..+..+++|+.|++++|.++. + ..+..+++|++|++++|++++.
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~------------------ 78 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI------------------ 78 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC------------------
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc------------------
Confidence 44555666655543 234456677777777777652 2 2466666777777766666531
Q ss_pred CccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCc
Q 039922 395 NRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVP 474 (973)
Q Consensus 395 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 474 (973)
..+..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++..+
T Consensus 79 --------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 150 (272)
T 3rfs_A 79 --------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPK 150 (272)
T ss_dssp --------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred --------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCH
Confidence 245666777777777777777666677777777777777777777767777888888888888888887777
Q ss_pred hhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCcccccccc
Q 039922 475 SQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAV 554 (973)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 554 (973)
..+..+++|++|++++|++++..+..|+.+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++. ++.
T Consensus 151 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~ 223 (272)
T 3rfs_A 151 GVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPG 223 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTT
T ss_pred HHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcH
Confidence 7778888899999999999877777788889999999999999988888888899999999999988754 446
Q ss_pred ccEEecCCCcCccccChhhhcc
Q 039922 555 LTSLDLSSNLLTGEIPLELTKL 576 (973)
Q Consensus 555 L~~L~Ls~N~l~~~~p~~l~~l 576 (973)
|+.|+++.|+++|.+|.++..+
T Consensus 224 l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 224 IRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp THHHHHHHHHTGGGBBCTTSCB
T ss_pred HHHHHHHHHhCCCcccCccccc
Confidence 8889999999999999887665
No 330
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=5.4e-26 Score=252.37 Aligned_cols=265 Identities=18% Similarity=0.279 Sum_probs=188.3
Q ss_pred CCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCc--cccceeccCCCcccCcCCcCcCCCcCCccEEecccccccc
Q 039922 58 SPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRI--RTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIG 135 (973)
Q Consensus 58 ~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~ 135 (973)
-|++|+++.|+.. .+..++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+.+
T Consensus 35 vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 35 VCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCH
Confidence 3568999998743 4788999998876 5567777 8999999999999876553 5679999999999999887
Q ss_pred c-CCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCc-ccCCc-ccccccccccccEeeccCc-CCCCCCCC
Q 039922 136 E-LPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGN-LLSGL-IPSFLGNLTELTHFELGYN-PLKSSPLP 211 (973)
Q Consensus 136 ~-~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~Ls~n-~l~~~~~~ 211 (973)
. ++..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .++...
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~-- 185 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKH-- 185 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHH--
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHH--
Confidence 6 8888999999999999999999888888999999999999999 68753 6777889999999999999 775422
Q ss_pred ccccCcchhHHHhhccCcccccCCccccCCC-CCCEEEccCC--ccc-ccCCcCCCCCCCCCEEEccCCc-CcccCchhc
Q 039922 212 SSVGNLSKLENLWAAKANLIGEIPDSIGKLA-FLSNLDLSDN--FLS-GKIPHSFSGLASIEQIELFDNQ-LSGELPESL 286 (973)
Q Consensus 212 ~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~l 286 (973)
++..+..++ +|++|++++| .++ +.++..+..+++|++|++++|. +++..+..+
T Consensus 186 ----------------------~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 186 ----------------------VQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp ----------------------HHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred ----------------------HHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 233344555 6666666666 333 3344455556666666666666 555555566
Q ss_pred cCCCccceeeccccccCCCChh---hhh-cccCcEEEccCCcCCCCCCccccCC-CccceeeeccccccCCCCCCccC
Q 039922 287 SNLTTLLRLDISQNNLTGNLPE---TIA-AMSLESLNLNDNYFTGEIPESLASN-PNLVQLKLFNNSFSGKLPDDLGK 359 (973)
Q Consensus 287 ~~l~~L~~L~Ls~N~l~~~~~~---~~~-~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~ 359 (973)
..+++|+.|++++|. +..+. .+. ..+|+.|++++| ++. +.+..+ .+|..|++++|++++..|..++.
T Consensus 244 ~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 244 FQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred hCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 666666666666664 12222 122 225666666666 332 123333 23666667777777777766654
No 331
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=9.8e-25 Score=255.62 Aligned_cols=190 Identities=17% Similarity=0.186 Sum_probs=147.2
Q ss_pred CccccccccCCeeEEEEEECCCCEEEEEEecCCCCCch------hHHHHHHHHHHHhcCCCCCeeeEEeEEecCCeeEEE
Q 039922 685 TEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPE------TETVFRSEIETLGRVRHGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 758 (973)
...++||+|+||.||+++. .++.+|+|+...+..... ..+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4567999999999999954 488999998754332211 134578999999999999999666666677788999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccc
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQS 838 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~ 838 (973)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||++++ .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999875 457999999999999999 9999999999999999 999999999987644
Q ss_pred cCCCcc---ccccccccccCccccccccC--CCCCCCCChhhHHHHHHHHHcCCCCCC
Q 039922 839 QEGQSD---DAMSCVAGSYGYIAPEYAYT--KKVTEKSDVYSFGVVLMELVTGKRPND 891 (973)
Q Consensus 839 ~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~~ 891 (973)
...... .......||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 321100 01234679999999999986 668888999999999998888877663
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.6e-23 Score=220.11 Aligned_cols=192 Identities=24% Similarity=0.300 Sum_probs=101.4
Q ss_pred CCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccC
Q 039922 58 SPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGEL 137 (973)
Q Consensus 58 ~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~ 137 (973)
+||.|.|.+|... ...+++++++++. +|..+. ++++.|+|++|+++ +..
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~-------------------------~~~ 51 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLA-------------------------TLS 51 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCC-------------------------CCC
T ss_pred cCCCCCceEcCCC---CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcC-------------------------ccC
Confidence 5889999999643 3357777777763 444443 45566666666665 333
Q ss_pred CccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCc
Q 039922 138 PDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNL 217 (973)
Q Consensus 138 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 217 (973)
+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|+++.+
T Consensus 52 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--------- 122 (251)
T 3m19_A 52 DATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSL--------- 122 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---------
T ss_pred HhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCc---------
Confidence 33444444455555555555444444445555555555555555544444445555555555555544321
Q ss_pred chhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeec
Q 039922 218 SKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDI 297 (973)
Q Consensus 218 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 297 (973)
.+..+.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 123 ----------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 186 (251)
T 3m19_A 123 ----------------PSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186 (251)
T ss_dssp ----------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ----------------ChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 1122334445555555555555444445555555555555555555444445555555555555
Q ss_pred cccccCCC
Q 039922 298 SQNNLTGN 305 (973)
Q Consensus 298 s~N~l~~~ 305 (973)
++|+++..
T Consensus 187 ~~N~~~c~ 194 (251)
T 3m19_A 187 FGNQFDCS 194 (251)
T ss_dssp CSCCBCTT
T ss_pred eCCceeCC
Confidence 55555543
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.9e-23 Score=225.60 Aligned_cols=201 Identities=23% Similarity=0.189 Sum_probs=101.4
Q ss_pred ccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCcc
Q 039922 357 LGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVD 436 (973)
Q Consensus 357 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 436 (973)
+.++++++++++++|.++. +|..+. +.++.|++++|++.+..+..+..+++|++|++++|.+++..+.
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------- 73 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--------- 73 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC---------
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC---------
Confidence 5567777778887777763 333221 3445555555555544444455555555555555555433221
Q ss_pred EEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccc
Q 039922 437 FFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENM 516 (973)
Q Consensus 437 ~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (973)
..+++|++|++++|.++ .+|..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|+
T Consensus 74 -----------------~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 74 -----------------GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp -----------------SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred -----------------CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 34444455555555444 344444455555555555555554444445555555555555555
Q ss_pred cccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcC
Q 039922 517 FTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKL 588 (973)
Q Consensus 517 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l 588 (973)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+... .|+.+++++|++
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 55444444455555555555555555333334445555555555555555 444444443 444444444433
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=3.7e-23 Score=223.36 Aligned_cols=206 Identities=24% Similarity=0.200 Sum_probs=162.2
Q ss_pred cccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCccee
Q 039922 332 SLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTL 411 (973)
Q Consensus 332 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 411 (973)
.+.++++++.+++++|.++ .+|..+. ++++.|+|++|++++..+..+..+++|+.|++++|.+++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 3677899999999999999 6776654 6899999999999999999999999999999999999865443 788999
Q ss_pred eEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCC
Q 039922 412 NYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQN 491 (973)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (973)
++|++++|+++ .+|..+..+ ++|+.|++++|++++..|..|..+++|++|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l------------------------~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTL------------------------PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTC------------------------TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccC------------------------CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 99999999987 344444444 45555555555555455556667777777777777
Q ss_pred cccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccc
Q 039922 492 RFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++...
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 777666666777788888888888888655566778888888888888888 6788888888899999999988753
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.4e-25 Score=246.57 Aligned_cols=262 Identities=18% Similarity=0.234 Sum_probs=166.7
Q ss_pred eeeccccccCCCChhhhhccc-CcEEEccCCcCCCCCC----ccccCCC-ccceeeeccccccCCCCCCccCC-----CC
Q 039922 294 RLDISQNNLTGNLPETIAAMS-LESLNLNDNYFTGEIP----ESLASNP-NLVQLKLFNNSFSGKLPDDLGKY-----SN 362 (973)
Q Consensus 294 ~L~Ls~N~l~~~~~~~~~~~~-L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l-----~~ 362 (973)
.+++++|.+++.+|....... |++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 356778888877777666654 8888888888876665 6666777 78888888887776666666554 77
Q ss_pred ccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCc-ceeeEEEccCCccccccCccc----CCC-CCcc
Q 039922 363 LEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGEC-KTLNYLRFGGNELQGELPSKF----WGL-PEVD 436 (973)
Q Consensus 363 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~----~~l-~~L~ 436 (973)
|++|+|++|++++..+..++.. +..+ ++|++|++++|++++..+..+ ..+ ++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee
Confidence 7777777777776555543322 1112 344555555555544333322 221 3555
Q ss_pred EEEeecCcccCCCC----CCCCCCC-CcceEeecCCcCCCCCchhhhc----C-CcCcEEeCcCCcccCC----Cccccc
Q 039922 437 FFEMYNNRFEGSIS----PSISNAP-KLTGILINGNNFTGEVPSQICT----L-RQLQAVDLSQNRFSGH----LPTCIT 502 (973)
Q Consensus 437 ~L~L~~N~l~~~~~----~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~ 502 (973)
.|+|++|++++... ..+...+ +|++|++++|++++..+..++. + ++|++|||++|+|++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 55555555543222 2223333 6777777777777666654443 3 5788888888888752 444555
Q ss_pred c-ccccceeeccccccccccC----cccCccccceeeeeccCcccCC-------CCccccccccccEEecCCCcCccccC
Q 039922 503 Q-LNKLQQLELQENMFTGELP----RNLNSLTALIVLNLSTNQLTGT-------IPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 503 ~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
. .++|++|+|++|++++..+ ..+..+++|+.|+|++|.+++. ++..+..+++|+.|||++|++.+..|
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 4 3478888888888876544 3456678888888888885532 33467778888899999998887766
Q ss_pred hhhhc
Q 039922 571 LELTK 575 (973)
Q Consensus 571 ~~l~~ 575 (973)
..+..
T Consensus 302 ~~~~~ 306 (362)
T 3goz_A 302 IPISN 306 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=7.3e-25 Score=245.46 Aligned_cols=261 Identities=19% Similarity=0.224 Sum_probs=185.9
Q ss_pred EEEccCCcCcccCchhccCCCccceeeccccccCCCCh----hhhhc-c-cCcEEEccCCcCCCCCCccccCC-----Cc
Q 039922 270 QIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLP----ETIAA-M-SLESLNLNDNYFTGEIPESLASN-----PN 338 (973)
Q Consensus 270 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~-~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 338 (973)
.+.++.|.+++.+|..+...++|+.|+|++|.+++..+ ..+.. . +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888888889999999999998776 44543 3 69999999999998888877775 99
Q ss_pred cceeeeccccccCCCCCCccC----C-CCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCC-cceee
Q 039922 339 LVQLKLFNNSFSGKLPDDLGK----Y-SNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGE-CKTLN 412 (973)
Q Consensus 339 L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~ 412 (973)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+.. .+.. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------------------~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ--------------------AFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH--------------------HHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH--------------------HHHhCCCcee
Confidence 999999999999777765444 3 89999999999998766554432 1122 13455
Q ss_pred EEEccCCccccccC----cccCCCC-CccEEEeecCcccCCCCCCC----CCC-CCcceEeecCCcCCCC----Cchhhh
Q 039922 413 YLRFGGNELQGELP----SKFWGLP-EVDFFEMYNNRFEGSISPSI----SNA-PKLTGILINGNNFTGE----VPSQIC 478 (973)
Q Consensus 413 ~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~----~~~-~~L~~L~L~~N~l~~~----~p~~~~ 478 (973)
+|+|++|.+++..+ ..+..++ +|+.|+|++|++++..+..+ ... ++|++|+|++|.+++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 55555555553222 2223333 56666666666655444332 233 4777777777777753 445555
Q ss_pred c-CCcCcEEeCcCCcccCCCc----cccccccccceeecccccccc-------ccCcccCccccceeeeeccCcccCCCC
Q 039922 479 T-LRQLQAVDLSQNRFSGHLP----TCITQLNKLQQLELQENMFTG-------ELPRNLNSLTALIVLNLSTNQLTGTIP 546 (973)
Q Consensus 479 ~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~-------~~p~~~~~l~~L~~L~Ls~N~l~~~~p 546 (973)
. .++|++|+|++|++++..+ ..+..+++|+.|+|++|++.+ .++..+..+++|+.|||++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 5 3588899999998886544 344667889999999998443 344567888999999999999986655
Q ss_pred cccc
Q 039922 547 PELG 550 (973)
Q Consensus 547 ~~~~ 550 (973)
..+.
T Consensus 302 ~~~~ 305 (362)
T 3goz_A 302 IPIS 305 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.4e-22 Score=214.49 Aligned_cols=201 Identities=17% Similarity=0.188 Sum_probs=152.0
Q ss_pred hhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCc
Q 039922 389 CIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNN 468 (973)
Q Consensus 389 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~ 468 (973)
.++++++.+. .+|..+. +++++|+|++|.+++..+..|.++++|+.|+|++|++++..+..+..+++|++|++++|+
T Consensus 18 ~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 18 EVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp EEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 3444444443 3444333 467888888888888777788888888888888888888778888888888999999999
Q ss_pred CCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCcc
Q 039922 469 FTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPE 548 (973)
Q Consensus 469 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 548 (973)
+++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 88777778888999999999999999777777888999999999999999777778999999999999999999777778
Q ss_pred ccccccccEEecCCCcCcccc------ChhhhcccccceeccCCcCcccC
Q 039922 549 LGNLAVLTSLDLSSNLLTGEI------PLELTKLKLNQFNISHNKLYGEV 592 (973)
Q Consensus 549 ~~~l~~L~~L~Ls~N~l~~~~------p~~l~~l~l~~l~l~~N~l~g~~ 592 (973)
|..+++|+.|+|++|++++.. +..+..-.....+..+|++.+..
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 224 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQNLHESP 224 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHHSGGGBCC-------CCG
T ss_pred HhCCCCCCEEEeeCCceeCCccccHHHHHHHHhcccceeeccCcccccCC
Confidence 999999999999999998763 23332222333445555555443
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=228.79 Aligned_cols=232 Identities=16% Similarity=0.192 Sum_probs=158.9
Q ss_pred hhcccCcEEEccCCcCCCCCCc---cccCCCccceeeeccccccCCCCCCc--cCCCCccceeeecccccccCCcccccc
Q 039922 310 IAAMSLESLNLNDNYFTGEIPE---SLASNPNLVQLKLFNNSFSGKLPDDL--GKYSNLEYFDVSTNDFTGELPRFLCFR 384 (973)
Q Consensus 310 ~~~~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l 384 (973)
+....++.|.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+..-
T Consensus 61 ~~~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~--- 137 (310)
T 4glp_A 61 VKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLA--- 137 (310)
T ss_dssp GSSCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHH---
T ss_pred hhhcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhH---
Confidence 3344677888887776531111 12234568888888888888887777 778888888888888875433110
Q ss_pred CCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccC---CC-CCCCCCCCCcc
Q 039922 385 NKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEG---SI-SPSISNAPKLT 460 (973)
Q Consensus 385 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~-~~~~~~~~~L~ 460 (973)
...+..+++|++|++++|++.+..+..|..+++|+.|+|++|++.+ .. +..+..+++|+
T Consensus 138 -----------------~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~ 200 (310)
T 4glp_A 138 -----------------ELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQ 200 (310)
T ss_dssp -----------------HHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCC
T ss_pred -----------------HHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCC
Confidence 0123345666666777776666666666666677777777766543 11 22346777888
Q ss_pred eEeecCCcCCCCCch----hhhcCCcCcEEeCcCCcccCCCccccccc---cccceeeccccccccccCcccCcccccee
Q 039922 461 GILINGNNFTGEVPS----QICTLRQLQAVDLSQNRFSGHLPTCITQL---NKLQQLELQENMFTGELPRNLNSLTALIV 533 (973)
Q Consensus 461 ~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (973)
+|++++|+++ .++. .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.
T Consensus 201 ~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~ 276 (310)
T 4glp_A 201 NLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRV 276 (310)
T ss_dssp SCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSC
T ss_pred EEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCE
Confidence 8888888886 3333 24677888888888888887777777766 58888888888888 6677664 78888
Q ss_pred eeeccCcccCCCCccccccccccEEecCCCcCcc
Q 039922 534 LNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTG 567 (973)
Q Consensus 534 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (973)
|||++|+|++ +|. +..+++|+.|+|++|+++.
T Consensus 277 L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 277 LDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp EECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred EECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 8888888885 343 6777888888888888763
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.6e-25 Score=253.49 Aligned_cols=115 Identities=18% Similarity=0.265 Sum_probs=53.5
Q ss_pred CCCCcceEeecCCcCCC-----CCchhhhcCCcCcEEeCcCCccc----CCCccccccccccceeeccccccccc----c
Q 039922 455 NAPKLTGILINGNNFTG-----EVPSQICTLRQLQAVDLSQNRFS----GHLPTCITQLNKLQQLELQENMFTGE----L 521 (973)
Q Consensus 455 ~~~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~ 521 (973)
.+++|+.|++++|+++. ..|..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|++++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 34444444444444441 12224444455555555555553 33444445555555555555555433 3
Q ss_pred Cccc--CccccceeeeeccCcccC----CCCccc-cccccccEEecCCCcCcccc
Q 039922 522 PRNL--NSLTALIVLNLSTNQLTG----TIPPEL-GNLAVLTSLDLSSNLLTGEI 569 (973)
Q Consensus 522 p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 569 (973)
|..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|+|++|++++..
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 3333 224555555555555543 244444 33455555555555555443
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.4e-22 Score=212.85 Aligned_cols=154 Identities=17% Similarity=0.207 Sum_probs=71.0
Q ss_pred ccCCcceeeEEEccC-CccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcc---eEeecCC-cCCCCCchhhh
Q 039922 404 SYGECKTLNYLRFGG-NELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLT---GILINGN-NFTGEVPSQIC 478 (973)
Q Consensus 404 ~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~---~L~L~~N-~l~~~~p~~~~ 478 (973)
.|..+++|++|++++ |++++..+..|.++++|+.|++++|++++ +|. +..+++|+ .|++++| .+++..+..|.
T Consensus 75 ~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~ 152 (239)
T 2xwt_C 75 SFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQ 152 (239)
T ss_dssp TEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTT
T ss_pred HcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCccccc
Confidence 444555555555555 55554444555555555555555555554 222 44444444 4445444 44433333444
Q ss_pred cCCcCc-EEeCcCCcccCCCccccccccccceeeccccc-cccccCcccCcc-ccceeeeeccCcccCCCCccccccccc
Q 039922 479 TLRQLQ-AVDLSQNRFSGHLPTCITQLNKLQQLELQENM-FTGELPRNLNSL-TALIVLNLSTNQLTGTIPPELGNLAVL 555 (973)
Q Consensus 479 ~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L 555 (973)
.+++|+ .|++++|+++ .+|......++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|+|+ .+|.. .+++|
T Consensus 153 ~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L 228 (239)
T 2xwt_C 153 GLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHL 228 (239)
T ss_dssp TTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTC
T ss_pred chhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccC
Confidence 444555 5555555544 222222112444445554442 443334444444 44444444444444 23322 33444
Q ss_pred cEEecCCC
Q 039922 556 TSLDLSSN 563 (973)
Q Consensus 556 ~~L~Ls~N 563 (973)
+.|+++++
T Consensus 229 ~~L~l~~~ 236 (239)
T 2xwt_C 229 KELIARNT 236 (239)
T ss_dssp SEEECTTC
T ss_pred ceeeccCc
Confidence 44444443
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=8.2e-25 Score=247.64 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=186.5
Q ss_pred CCCccccCCCccceeeeccccccCCC----CCCccCCCCccceeeeccc---ccccCCccccccCCchhhhcccCccCCC
Q 039922 328 EIPESLASNPNLVQLKLFNNSFSGKL----PDDLGKYSNLEYFDVSTND---FTGELPRFLCFRNKLQCIIIFNNRFSGK 400 (973)
Q Consensus 328 ~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~Ls~N~---l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 400 (973)
.++..+..+++|++|+|++|++++.. +..+..+++|++|+|++|. +++.+|..+..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~----------------- 85 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL----------------- 85 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH-----------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH-----------------
Confidence 45667777888899999998888653 3446778888888888864 34444443311
Q ss_pred CCCccCCcceeeEEEccCCcccc----ccCcccCCCCCccEEEeecCcccCCCCCCCC----CC---------CCcceEe
Q 039922 401 IPESYGECKTLNYLRFGGNELQG----ELPSKFWGLPEVDFFEMYNNRFEGSISPSIS----NA---------PKLTGIL 463 (973)
Q Consensus 401 ~p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~~---------~~L~~L~ 463 (973)
+...+..+++|++|+|++|.+++ .++..+..+++|+.|+|++|.++...+..+. .+ ++|++|+
T Consensus 86 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 86 LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 11223556666666777766665 3455566667777777777766533333332 22 7899999
Q ss_pred ecCCcCC-CCCc---hhhhcCCcCcEEeCcCCccc--C---CCccccccccccceeeccccccc----cccCcccCcccc
Q 039922 464 INGNNFT-GEVP---SQICTLRQLQAVDLSQNRFS--G---HLPTCITQLNKLQQLELQENMFT----GELPRNLNSLTA 530 (973)
Q Consensus 464 L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~ 530 (973)
+++|+++ +.+| ..+..+++|++|+|++|+++ | ..|..+..+++|+.|+|++|+++ +.+|..+..+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 9999987 4455 46778999999999999997 3 34558889999999999999997 678999999999
Q ss_pred ceeeeeccCcccCC----CCcccc--ccccccEEecCCCcCcc----ccChhh-hcc-cccceeccCCcCcccC
Q 039922 531 LIVLNLSTNQLTGT----IPPELG--NLAVLTSLDLSSNLLTG----EIPLEL-TKL-KLNQFNISHNKLYGEV 592 (973)
Q Consensus 531 L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~l-~~l-~l~~l~l~~N~l~g~~ 592 (973)
|+.|+|++|+|++. +|..+. .+++|+.|+|++|++++ .+|..+ ..+ .|+.|++++|++++..
T Consensus 246 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 246 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 99999999999865 566773 49999999999999998 599888 555 8999999999998654
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=5e-23 Score=225.27 Aligned_cols=226 Identities=16% Similarity=0.175 Sum_probs=150.2
Q ss_pred CccceeeccccccCCC----ChhhhhcccCcEEEccCCcCCCCCCccc--cCCCccceeeeccccccCCCC----CCccC
Q 039922 290 TTLLRLDISQNNLTGN----LPETIAAMSLESLNLNDNYFTGEIPESL--ASNPNLVQLKLFNNSFSGKLP----DDLGK 359 (973)
Q Consensus 290 ~~L~~L~Ls~N~l~~~----~~~~~~~~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~l~~ 359 (973)
..++.+.+.++.++.. +.......+|++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4577888888777532 1122233469999999999999999988 899999999999999997655 23456
Q ss_pred CCCccceeeecccccccCCccccccCCchhhhcccCccCCC--C--CCccCCcceeeEEEccCCccccccCcccCCCCCc
Q 039922 360 YSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGK--I--PESYGECKTLNYLRFGGNELQGELPSKFWGLPEV 435 (973)
Q Consensus 360 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 435 (973)
+++|++|+|++|++++..+..+..+++|++|++++|++.+. + +..++.+++|++|++++|+++...+.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~-------- 215 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV-------- 215 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHH--------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHH--------
Confidence 88888888888888766655555555555555555554321 1 12223444444444444444311100
Q ss_pred cEEEeecCcccCCCCC-CCCCCCCcceEeecCCcCCCCCchhhhcC---CcCcEEeCcCCcccCCCccccccccccceee
Q 039922 436 DFFEMYNNRFEGSISP-SISNAPKLTGILINGNNFTGEVPSQICTL---RQLQAVDLSQNRFSGHLPTCITQLNKLQQLE 511 (973)
Q Consensus 436 ~~L~L~~N~l~~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (973)
+. .+..+++|++|++++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+
T Consensus 216 --------------~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~ 278 (310)
T 4glp_A 216 --------------CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLD 278 (310)
T ss_dssp --------------HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEE
T ss_pred --------------HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEE
Confidence 00 13455666666666666666656555555 57888888888887 5676664 6788888
Q ss_pred ccccccccccCcccCccccceeeeeccCccc
Q 039922 512 LQENMFTGELPRNLNSLTALIVLNLSTNQLT 542 (973)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (973)
|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 279 Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 279 LSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 888888743 33 567788888888888876
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=2.5e-22 Score=210.88 Aligned_cols=195 Identities=17% Similarity=0.207 Sum_probs=161.2
Q ss_pred CchhhhcccCccCCCCCCccCCcceeeEEEccCCc-cccccCcccCCCCCccEEEeec-CcccCCCCCCCCCCCCcceEe
Q 039922 386 KLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNE-LQGELPSKFWGLPEVDFFEMYN-NRFEGSISPSISNAPKLTGIL 463 (973)
Q Consensus 386 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~ 463 (973)
+|+.|++++|++++..+..|..+++|++|++++|+ +++..+..|.++++|+.|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44444455555554555678888999999999997 8888888999999999999998 999988888899999999999
Q ss_pred ecCCcCCCCCchhhhcCCcCc---EEeCcCC-cccCCCccccccccccc-eeeccccccccccCcccCccccceeeeecc
Q 039922 464 INGNNFTGEVPSQICTLRQLQ---AVDLSQN-RFSGHLPTCITQLNKLQ-QLELQENMFTGELPRNLNSLTALIVLNLST 538 (973)
Q Consensus 464 L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (973)
+++|++++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++ .+|......++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 99999996 665 88888888 9999999 99977777899999999 9999999999 5554433348999999999
Q ss_pred Cc-ccCCCCcccccc-ccccEEecCCCcCccccChhhhcc-cccceeccCC
Q 039922 539 NQ-LTGTIPPELGNL-AVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHN 586 (973)
Q Consensus 539 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N 586 (973)
|+ +++..+..|..+ ++|+.|||++|+++ .+|.. .+ .|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCc
Confidence 95 986667789999 99999999999998 56654 34 7888888766
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=9.7e-24 Score=234.14 Aligned_cols=251 Identities=16% Similarity=0.235 Sum_probs=157.7
Q ss_pred CcEEEccCCcCCCCCCccccCC--CccceeeeccccccCCCCCCccCCCCccceeeeccccccc-CCccccccCCchhhh
Q 039922 315 LESLNLNDNYFTGEIPESLASN--PNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGE-LPRFLCFRNKLQCII 391 (973)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~ 391 (973)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.+++. ++..+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~---------- 114 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGIL---------- 114 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHH----------
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHH----------
Confidence 445555555544 2334444 5566666666666644443 34566666666666665533 33333
Q ss_pred cccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecC-cccCC-CCCCCCCCCCcceEeecCC-c
Q 039922 392 IFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNN-RFEGS-ISPSISNAPKLTGILINGN-N 468 (973)
Q Consensus 392 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~~~~L~~L~L~~N-~ 468 (973)
..+++|++|++++|.+++..+..+..+++|+.|++++| .+++. ++..+..+++|++|++++| .
T Consensus 115 --------------~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~ 180 (336)
T 2ast_B 115 --------------SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180 (336)
T ss_dssp --------------TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred --------------hhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCC
Confidence 33334444444444444444444444444444444444 33321 2334555666777777777 6
Q ss_pred CCCC-CchhhhcCC-cCcEEeCcCC--ccc-CCCccccccccccceeeccccc-cccccCcccCccccceeeeeccCc-c
Q 039922 469 FTGE-VPSQICTLR-QLQAVDLSQN--RFS-GHLPTCITQLNKLQQLELQENM-FTGELPRNLNSLTALIVLNLSTNQ-L 541 (973)
Q Consensus 469 l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l 541 (973)
+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|+|++|. +++..+..+..+++|+.|+|++|. +
T Consensus 181 l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~ 260 (336)
T 2ast_B 181 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI 260 (336)
T ss_dssp CCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTC
T ss_pred cChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCC
Confidence 6643 566777888 8888888888 454 3567777888899999999998 777778888889999999999985 3
Q ss_pred cCCCCccccccccccEEecCCCcCccccChhhhcc--cccceeccCCcCcccCCCCCc
Q 039922 542 TGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL--KLNQFNISHNKLYGEVPSDFD 597 (973)
Q Consensus 542 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~l~~l~l~~N~l~g~~p~~~~ 597 (973)
+......+.++++|+.|+|++| ++ ...+..+ .+..|++++|+++|..|..+.
T Consensus 261 ~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 261 IPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 2222226788999999999998 33 2234444 488889999999999887653
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=2.9e-22 Score=218.64 Aligned_cols=207 Identities=22% Similarity=0.333 Sum_probs=126.9
Q ss_pred EccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccC
Q 039922 319 NLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFS 398 (973)
Q Consensus 319 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 398 (973)
.+..+.+++.+ .+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l-------------- 84 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNL-------------- 84 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTC--------------
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccC--------------
Confidence 44455554332 24456778888888888773 44 57777788888888877764332 4444
Q ss_pred CCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhh
Q 039922 399 GKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQIC 478 (973)
Q Consensus 399 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 478 (973)
++|++|++++|++++. ..+..+++|+.|++++|++++.. .+..+++|+.|++++|.+++..+ +.
T Consensus 85 ----------~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~ 148 (308)
T 1h6u_A 85 ----------TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LA 148 (308)
T ss_dssp ----------CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GG
T ss_pred ----------CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--cc
Confidence 4455555555554432 13445555555555555555422 25556666666666666664332 66
Q ss_pred cCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEE
Q 039922 479 TLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSL 558 (973)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 558 (973)
.+++|++|++++|++++ ++. +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++.. .+..+++|+.|
T Consensus 149 ~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L 222 (308)
T 1h6u_A 149 GLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIV 222 (308)
T ss_dssp GCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEE
T ss_pred CCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEE
Confidence 66777777777777764 333 6667777777777777764433 666777777777777776433 26777777777
Q ss_pred ecCCCcCcc
Q 039922 559 DLSSNLLTG 567 (973)
Q Consensus 559 ~Ls~N~l~~ 567 (973)
+|++|++++
T Consensus 223 ~l~~N~i~~ 231 (308)
T 1h6u_A 223 TLTNQTITN 231 (308)
T ss_dssp EEEEEEEEC
T ss_pred EccCCeeec
Confidence 777777763
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=5.8e-22 Score=216.27 Aligned_cols=213 Identities=16% Similarity=0.290 Sum_probs=146.2
Q ss_pred CccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeee
Q 039922 290 TTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVS 369 (973)
Q Consensus 290 ~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 369 (973)
.++..+.+..+.+++... .....+|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 19 ~~~~~~~l~~~~~~~~~~-~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~ 93 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTVT-QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS 93 (308)
T ss_dssp HHHHHHHTTCSSTTSEEC-HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC
T ss_pred HHHHHHHhCCCCcCceec-HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc
Confidence 345555677777764322 2233489999999999985 44 68899999999999999996544 9999999999999
Q ss_pred cccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCC
Q 039922 370 TNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSI 449 (973)
Q Consensus 370 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 449 (973)
+|++++. + .+. .+++|++|++++|++++.. .+..+++|+.|++++|++++..
T Consensus 94 ~n~l~~~-~-~~~------------------------~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~ 145 (308)
T 1h6u_A 94 GNPLKNV-S-AIA------------------------GLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNIS 145 (308)
T ss_dssp SCCCSCC-G-GGT------------------------TCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCG
T ss_pred CCcCCCc-h-hhc------------------------CCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCc
Confidence 9998742 2 344 4455555555555555432 2555555556666666555433
Q ss_pred CCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccc
Q 039922 450 SPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLT 529 (973)
Q Consensus 450 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (973)
+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++. +. +..+++|+.|+|++|++++..| +..++
T Consensus 146 ~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~ 217 (308)
T 1h6u_A 146 P--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP--LANTS 217 (308)
T ss_dssp G--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG--GTTCT
T ss_pred c--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccCcccc--ccCCC
Confidence 2 5666667777777777764333 66777777777777777743 32 6777777777777777775443 67777
Q ss_pred cceeeeeccCcccC
Q 039922 530 ALIVLNLSTNQLTG 543 (973)
Q Consensus 530 ~L~~L~Ls~N~l~~ 543 (973)
+|+.|+|++|++++
T Consensus 218 ~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 218 NLFIVTLTNQTITN 231 (308)
T ss_dssp TCCEEEEEEEEEEC
T ss_pred CCCEEEccCCeeec
Confidence 78888888887774
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.5e-21 Score=217.38 Aligned_cols=240 Identities=13% Similarity=0.119 Sum_probs=103.1
Q ss_pred ceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCC-CccCCCCccc-eeeec
Q 039922 293 LRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPD-DLGKYSNLEY-FDVST 370 (973)
Q Consensus 293 ~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~-L~Ls~ 370 (973)
++++.++++++ .+|..+ ..++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|. .|.+++++++ +.++.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l-~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL-PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCC-SCCTTC-CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc-CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 34455555555 233222 12344555555555433333444445555555555544333322 3344444332 23333
Q ss_pred ccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeec-CcccCCC
Q 039922 371 NDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYN-NRFEGSI 449 (973)
Q Consensus 371 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~ 449 (973)
|+++.. .|..|..+++|++|++++|+++...+..+....++..+++.+ |++....
T Consensus 90 N~l~~l------------------------~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 90 NNLLYI------------------------NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp TTCCEE------------------------CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred Cccccc------------------------CchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 444433 333444444444444444444433333333444444444432 2333333
Q ss_pred CCCCCCCC-CcceEeecCCcCCCCCchhhhcCCcCcEEeCcC-CcccCCCccccccccccceeeccccccccccCcccCc
Q 039922 450 SPSISNAP-KLTGILINGNNFTGEVPSQICTLRQLQAVDLSQ-NRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNS 527 (973)
Q Consensus 450 ~~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 527 (973)
+..|..+. .++.|++++|+|+ .+|.......+|++|++++ |.++...++.|..+++|++|||++|+|+...+..+.+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 33333332 3444555555554 2333333334555555543 3444222234555555555555555555333333444
Q ss_pred cccceeeeeccCcccCCCCccccccccccEEecCCC
Q 039922 528 LTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSN 563 (973)
Q Consensus 528 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 563 (973)
+++|+.+++ +.++ .+| .+.++++|+.++++++
T Consensus 225 L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 225 LKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred chHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 444433332 2233 344 2555555555555543
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=3.7e-21 Score=197.26 Aligned_cols=175 Identities=22% Similarity=0.237 Sum_probs=98.9
Q ss_pred CCccceeEEcCCCC---------ceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecc
Q 039922 59 PCNWTGITCETQNQ---------SVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALD 129 (973)
Q Consensus 59 ~C~w~gv~c~~~~~---------~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~ 129 (973)
.|.|++|.|+.... +++.|+|+++.+++..+..|..+++|++|+|++|+++ .++...|..+++|++|+|+
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECC
Confidence 38999999975421 3555566666555544445555666666666666555 3444455555566666666
Q ss_pred cccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCC
Q 039922 130 YNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSP 209 (973)
Q Consensus 130 ~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 209 (973)
+|.+.+..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~--- 161 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD--- 161 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC---
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee---
Confidence 66555544455555566666666666655544444555566666666666655554445555566666666655442
Q ss_pred CCccccCcchhHHHhhccCcccccCCccccCCC
Q 039922 210 LPSSVGNLSKLENLWAAKANLIGEIPDSIGKLA 242 (973)
Q Consensus 210 ~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~ 242 (973)
+.+++|++|.++.|++.|.+|..++.++
T Consensus 162 -----~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 162 -----CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp -----CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred -----cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 2334455555555555555555544443
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=5.3e-22 Score=232.06 Aligned_cols=208 Identities=22% Similarity=0.354 Sum_probs=162.0
Q ss_pred ccCCccCCCCCCCC-----cccee-EEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCc
Q 039922 47 KLGDWVRTSQQSPC-----NWTGI-TCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPC 120 (973)
Q Consensus 47 ~~~sw~~~~~~~~C-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l 120 (973)
.+.+|.. +.++| .|.|+ .|.. .+++.|+|+++++++ +|..+. ++|++|+|++|+|+ .+| ..+
T Consensus 32 ~l~~W~~--~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip----~~l 99 (571)
T 3cvr_A 32 AWDKWEK--QALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP----ELP 99 (571)
T ss_dssp HHHHHHT--TCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC----CCC
T ss_pred HHHHHhc--cCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc----ccc
Confidence 4667864 34577 79999 7874 358899999999988 777664 78999999999998 666 346
Q ss_pred CCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeec
Q 039922 121 FHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFEL 200 (973)
Q Consensus 121 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 200 (973)
++|++|+|++|.+++ +|. +.. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 888899999998887 666 554 88999999998886 565 67888899999888886 454 5778888888
Q ss_pred cCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCC-------CEEEc
Q 039922 201 GYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASI-------EQIEL 273 (973)
Q Consensus 201 s~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------~~L~L 273 (973)
++|+++.+ |. +. ++|+.|+|++|+|+ .+|. |.. +| +.|+|
T Consensus 168 s~N~L~~l--------------------------p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~L 214 (571)
T 3cvr_A 168 RNNQLTFL--------------------------PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRC 214 (571)
T ss_dssp CSSCCSCC--------------------------CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEEC
T ss_pred CCCCCCCc--------------------------ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEec
Confidence 88887652 33 33 67888888888888 5565 554 66 89999
Q ss_pred cCCcCcccCchhccCCCccceeeccccccCCCChhhhhc
Q 039922 274 FDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAA 312 (973)
Q Consensus 274 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 312 (973)
++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..
T Consensus 215 s~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 215 RENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp CSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred CCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 999998 57888888999999999999998887777654
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2.9e-21 Score=215.02 Aligned_cols=241 Identities=17% Similarity=0.209 Sum_probs=170.2
Q ss_pred cEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccC
Q 039922 316 ESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNN 395 (973)
Q Consensus 316 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 395 (973)
+.++.++++++ .+|..+. +++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~----------------- 71 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE----------------- 71 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC-----------------
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC-----------------
Confidence 45566666666 4454442 456666666666664334456666666666666666543222
Q ss_pred ccCCCCCCccCCcceee-EEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecC-CcCCCCC
Q 039922 396 RFSGKIPESYGECKTLN-YLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILING-NNFTGEV 473 (973)
Q Consensus 396 ~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~-N~l~~~~ 473 (973)
+..|.+++++. .+.++.|+++...|..|..+++|+.|++++|+++...+..+....++..+++.+ |++....
T Consensus 72 ------~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 72 ------ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp ------TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred ------hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 24567777765 467778999999999999999999999999999988888888888899999865 5676555
Q ss_pred chhhhcCC-cCcEEeCcCCcccCCCccccccccccceeeccc-cccccccCcccCccccceeeeeccCcccCCCCccccc
Q 039922 474 PSQICTLR-QLQAVDLSQNRFSGHLPTCITQLNKLQQLELQE-NMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGN 551 (973)
Q Consensus 474 p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 551 (973)
+..|..+. .++.|+|++|+|+ .+|.......+|+.|++++ |+++...++.|.++++|+.|||++|+|+...+..|.+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 55666664 6889999999998 4555555667899999985 6677444467899999999999999999544444555
Q ss_pred cccccEEecCCCcCccccChhhhcc-cccceeccCCc
Q 039922 552 LAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNK 587 (973)
Q Consensus 552 l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~ 587 (973)
|+ .|.+.++.--..+|. +..+ +|+.++++++.
T Consensus 225 L~---~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 225 LK---KLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp CC---EEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred ch---HhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 54 444444333347774 6667 78888887654
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=1e-21 Score=210.67 Aligned_cols=147 Identities=16% Similarity=0.085 Sum_probs=117.1
Q ss_pred CCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCc----------------hhHHHHHHHHHHHhcCCCCCeeeEE
Q 039922 683 HLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKP----------------ETETVFRSEIETLGRVRHGNVVKLL 746 (973)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~h~niv~l~ 746 (973)
.|...+.||+|+||.||+|...+|+.||+|++....... .....+.+|+.++++++ | +++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 355669999999999999999889999999995432111 13567889999999999 4 6666
Q ss_pred eEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceE
Q 039922 747 MCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPR 826 (973)
Q Consensus 747 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 826 (973)
+++.. +..|+||||+++|+|.+ +.. .....++.|++.|++|||+. +|+||||||+||+++ ++.+|
T Consensus 168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 168 KVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp CEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEE
T ss_pred eEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEE
Confidence 65543 55699999999999998 421 12346999999999999999 999999999999999 99999
Q ss_pred EeccCcchhccccCCCccccccccccccCccccccccC
Q 039922 827 VADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYT 864 (973)
Q Consensus 827 l~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 864 (973)
|+|||+++. +..|+|||++..
T Consensus 233 l~DFG~a~~-----------------~~~~~a~e~l~r 253 (282)
T 1zar_A 233 IIDFPQSVE-----------------VGEEGWREILER 253 (282)
T ss_dssp ECCCTTCEE-----------------TTSTTHHHHHHH
T ss_pred EEECCCCeE-----------------CCCCCHHHHHHH
Confidence 999999863 234688998743
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.3e-20 Score=220.45 Aligned_cols=109 Identities=23% Similarity=0.351 Sum_probs=82.0
Q ss_pred CCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccc---
Q 039922 455 NAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTAL--- 531 (973)
Q Consensus 455 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--- 531 (973)
.+++|+.|++++|.|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +|
T Consensus 138 ~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~ 205 (571)
T 3cvr_A 138 LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHS 205 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------
T ss_pred cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcc
Confidence 34556666666666664 443 45677778888888775 666 55 77888888888887 6666 554 66
Q ss_pred ----eeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc
Q 039922 532 ----IVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL 576 (973)
Q Consensus 532 ----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 576 (973)
+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+
T Consensus 206 ~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 206 EETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp --CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 99999999998 689988889999999999999999999988776
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2.4e-20 Score=191.18 Aligned_cols=160 Identities=18% Similarity=0.175 Sum_probs=85.3
Q ss_pred eeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCc
Q 039922 410 TLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLS 489 (973)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 489 (973)
+|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 34444444444444333444444444444444444444444444555555555555555554444445555566666666
Q ss_pred CCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCcccc
Q 039922 490 QNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEI 569 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 569 (973)
+|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++. ++.|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCcee
Confidence 6666544444455566666666666666644444555566666666666655432 345566666666666666
Q ss_pred Chhhhcc
Q 039922 570 PLELTKL 576 (973)
Q Consensus 570 p~~l~~l 576 (973)
|.++..+
T Consensus 182 p~~~~~l 188 (208)
T 2o6s_A 182 RNSAGSV 188 (208)
T ss_dssp BCTTSSB
T ss_pred eccCccc
Confidence 6655544
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=4e-21 Score=233.42 Aligned_cols=239 Identities=20% Similarity=0.222 Sum_probs=111.9
Q ss_pred chhhHHHHHHHhhhccCCCCCccCCccCCCCCCCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCC
Q 039922 26 LHGDAEILIRVKSDQLDDPNRKLGDWVRTSQQSPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSD 105 (973)
Q Consensus 26 ~~~~~~~l~~~k~~~~~d~~~~~~sw~~~~~~~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~ 105 (973)
...++++|+++......+.+..-..|..+ .+..+.|.+++++. .+++.|+|.++++... +. ..|+.++|+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~ 200 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-STPSGTATNSAVST--PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQ 200 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-CCccccCCCceecC--CccceEEeeCCCCCcc-hh-----hHhhcCccCc
Confidence 45688899999887654445555678543 34467899998875 4688999988887762 22 2356667777
Q ss_pred CcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcc
Q 039922 106 NYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLI 185 (973)
Q Consensus 106 n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 185 (973)
|.|. .+++..|.+. ..++.+..+++|++|+|++|.+. .+|..+..+++|++|+|++|.|+ .+
T Consensus 201 ~~i~---------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~l 262 (727)
T 4b8c_D 201 YSID---------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-EL 262 (727)
T ss_dssp -------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CC
T ss_pred cccc---------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-cc
Confidence 7665 2234445444 45667777888888888888877 56666777788888888888877 56
Q ss_pred cccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCC
Q 039922 186 PSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGL 265 (973)
Q Consensus 186 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 265 (973)
|..|++|++|++|+|++|.|+. +|..|+++++|++|+|++|.|+ .+|..|+++
T Consensus 263 p~~~~~l~~L~~L~Ls~N~l~~--------------------------lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l 315 (727)
T 4b8c_D 263 PAEIKNLSNLRVLDLSHNRLTS--------------------------LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNL 315 (727)
T ss_dssp CGGGGGGTTCCEEECTTSCCSS--------------------------CCSSGGGGTTCSEEECCSSCCC-CCCSSTTSC
T ss_pred ChhhhCCCCCCEEeCcCCcCCc--------------------------cChhhcCCCCCCEEECCCCCCC-ccChhhhcC
Confidence 7777777777777777777642 3455666777777777777776 566667777
Q ss_pred CCCCEEEccCCcCcccCchhccCCCc-cceeeccccccCCCChhhhhcccCcEEEccCC
Q 039922 266 ASIEQIELFDNQLSGELPESLSNLTT-LLRLDISQNNLTGNLPETIAAMSLESLNLNDN 323 (973)
Q Consensus 266 ~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N 323 (973)
++|+.|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|. .|..|++++|
T Consensus 316 ~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~-----~l~~l~l~~n 369 (727)
T 4b8c_D 316 CNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH-----ERRFIEINTD 369 (727)
T ss_dssp TTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-----C---------
T ss_pred CCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc-----ccceeEeecc
Confidence 77777777777777777766654422 23356667776665554 2344445444
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=4.9e-19 Score=182.69 Aligned_cols=156 Identities=20% Similarity=0.228 Sum_probs=112.7
Q ss_pred eEEEccCCccccccCcccCCCCCccEEEeecCcccCCCC-CCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcC
Q 039922 412 NYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSIS-PSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQ 490 (973)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 490 (973)
+.+++++|.++. +|..+. +.++.|+|++|++++..+ ..|..+++|+.|++++|.|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 356666666663 333332 234566666666665543 3466777777777777777766666777778888888888
Q ss_pred CcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccC
Q 039922 491 NRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88877667777778888888888888887777788888888888888888887777788888888888888888876654
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=2.5e-19 Score=212.04 Aligned_cols=191 Identities=21% Similarity=0.328 Sum_probs=119.3
Q ss_pred ccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEcc
Q 039922 338 NLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFG 417 (973)
Q Consensus 338 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 417 (973)
.+..+.+..+.+.+..+ +..+++|+.|++++|.+... + .+..+++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-------------------------~-~l~~l~~L~~L~Ls 73 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-------------------------Q-GIQYLPNVTKLFLN 73 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-------------------------T-TGGGCTTCCEEECT
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-------------------------h-HHccCCCCCEEEee
Confidence 45555556555553322 34556666666666655421 2 34555566666666
Q ss_pred CCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCC
Q 039922 418 GNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHL 497 (973)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 497 (973)
+|++++..+ +..+++|+.|+|++|++.+ ++.+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|+|++.
T Consensus 74 ~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~--l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l- 146 (605)
T 1m9s_A 74 GNKLTDIKP--LTNLKNLGWLFLDENKIKD--LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI- 146 (605)
T ss_dssp TSCCCCCGG--GGGCTTCCEEECCSSCCCC--CTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-
T ss_pred CCCCCCChh--hccCCCCCEEECcCCCCCC--ChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-
Confidence 666654443 5566666666666666654 23566666777777777776642 3466677777777777777643
Q ss_pred ccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccc
Q 039922 498 PTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 498 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ + +.+..+++|+.|+|++|++++.
T Consensus 147 -~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 147 -TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEECC
T ss_pred -hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCcCC
Confidence 456677777777777777775555 6777777777777777764 3 3567777777777777777653
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=2.9e-19 Score=193.00 Aligned_cols=170 Identities=22% Similarity=0.287 Sum_probs=78.2
Q ss_pred CcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEe
Q 039922 119 PCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHF 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 198 (973)
.+++|++|++++|.+... + .+..+++|++|+|++|++++..+ ++.+++|++|+|++|++++. ..+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 444455555555544332 2 24445555555555555554322 55555555555555555542 225555555555
Q ss_pred eccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcC
Q 039922 199 ELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQL 278 (973)
Q Consensus 199 ~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 278 (973)
+|++|+++.+ ..+..+++|++|++++|.+.+. ..++.+++|++|++++|++++..+ +..+++|++|++++|++
T Consensus 118 ~L~~n~i~~~---~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 118 SLEHNGISDI---NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp ECTTSCCCCC---GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCCC---hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 5555554431 1122222222222222222211 234445555555555555554333 55555555555555555
Q ss_pred cccCchhccCCCccceeeccccccC
Q 039922 279 SGELPESLSNLTTLLRLDISQNNLT 303 (973)
Q Consensus 279 ~~~~p~~l~~l~~L~~L~Ls~N~l~ 303 (973)
++. + .+..+++|+.|++++|+++
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred CCC-h-hhccCCCCCEEECcCCccc
Confidence 532 2 2455555555555555554
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=3.8e-21 Score=226.30 Aligned_cols=203 Identities=18% Similarity=0.155 Sum_probs=122.4
Q ss_pred cCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeE
Q 039922 334 ASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNY 413 (973)
Q Consensus 334 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 413 (973)
...++|+.|+|++|+++ .+|..++++++|+.|++++|......|. .+..+.+.+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 45667777777777776 6677777777777777765541100000 00011122333444444444444
Q ss_pred EE-ccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCc
Q 039922 414 LR-FGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNR 492 (973)
Q Consensus 414 L~-L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
|+ ++.|.+. +|..+.+.+|.++...+ ..|+.|++++|.|++ +|. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 44 3433322 22333344444443221 136666777777764 454 7777777777777777
Q ss_pred ccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCC-CccccccccccEEecCCCcCccccC
Q 039922 493 FSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTI-PPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..|+.+++|+.|+|++|++++.+|
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 77 667777777777777777777774 55 6777777777777777777655 7777777777777777777775544
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=2.1e-19 Score=194.21 Aligned_cols=151 Identities=25% Similarity=0.369 Sum_probs=94.4
Q ss_pred cCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCc
Q 039922 405 YGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQ 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 484 (973)
+..+++|++|++++|++++..+ +..+++|+.|++++|++++. +.+..+++|+.|++++|++++. ..+..+++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCC
Confidence 4555556666666666654433 55556666666666655542 2356666666666666666642 3566667777
Q ss_pred EEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCc
Q 039922 485 AVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNL 564 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 564 (973)
.|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCc
Confidence 777777777643 456667777777777777765444 6667777777777777764 33 36667777777777777
Q ss_pred Ccc
Q 039922 565 LTG 567 (973)
Q Consensus 565 l~~ 567 (973)
++.
T Consensus 212 i~~ 214 (291)
T 1h6t_A 212 CLN 214 (291)
T ss_dssp EEC
T ss_pred ccC
Confidence 663
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=8.8e-19 Score=180.81 Aligned_cols=154 Identities=20% Similarity=0.232 Sum_probs=119.5
Q ss_pred eEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCC
Q 039922 412 NYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQN 491 (973)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (973)
+.+++++|.++. +|..+. ++++.|++++|+|++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 456667776663 333332 56777777777777666667777778888888888887777788888888888888888
Q ss_pred cccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccc
Q 039922 492 RFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 88865556678888888888888888887788888888888888888888877777788888888888888888753
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=6.6e-19 Score=181.75 Aligned_cols=155 Identities=19% Similarity=0.228 Sum_probs=140.0
Q ss_pred cEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCc-hhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccc
Q 039922 436 DFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVP-SQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQE 514 (973)
Q Consensus 436 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
+.+++++|.++. +|..+. ..+++|++++|++++..| ..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 589999999986 455543 457899999999997755 4588999999999999999988788999999999999999
Q ss_pred cccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCC
Q 039922 515 NMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVP 593 (973)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p 593 (973)
|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..+..+ +|+.|++++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998889999999999999999999998889999988 89999999999998765
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6.4e-19 Score=208.54 Aligned_cols=187 Identities=21% Similarity=0.290 Sum_probs=129.6
Q ss_pred eecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCc
Q 039922 77 IDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNN 156 (973)
Q Consensus 77 l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~ 156 (973)
+++....+...+ .+..|++|+.|+|++|.+. .++ .+..|++|+.|+|++|.+.+..| +..+++|++|+|++|.
T Consensus 26 l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 26 DNLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HhccCCCccccc--chhcCCCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 344444443322 2456677777777777776 333 46677777777777777765444 6677777777777777
Q ss_pred CCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCc
Q 039922 157 FSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPD 236 (973)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~ 236 (973)
+++ +| .+..+++|++|+|++|++++. ..+..+++|+.|+|++|.++. . .
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-------------------------l--~ 147 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-------------------------I--T 147 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCC-------------------------C--G
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCC-------------------------c--h
Confidence 764 33 577777777777777777753 346677777777777776654 2 3
Q ss_pred cccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCC
Q 039922 237 SIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGN 305 (973)
Q Consensus 237 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 305 (973)
.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 46677888888888888887666 78888888888888888854 3578888888888888888754
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.8e-18 Score=179.84 Aligned_cols=160 Identities=28% Similarity=0.325 Sum_probs=82.3
Q ss_pred CCCCCccceeEEcCCCCceeEeecCCCccCCCCCCCccCccccceeccCCCcccCcCCcCcCCCcCCccEEecccccccc
Q 039922 56 QQSPCNWTGITCETQNQSVDGIDLSGFDLSGGFPNGFCRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQVLALDYNVFIG 135 (973)
Q Consensus 56 ~~~~C~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~L~L~~n~~~~ 135 (973)
+.+.|.|.+|.|+... + +.+|..+. ++|++|+|++|++++ +++..|.++++|++|+|++|.+.+
T Consensus 15 ~~~~Cs~~~v~c~~~~--l-----------~~ip~~~~--~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKR--H-----------ASVPAGIP--TNAQILYLHDNQITK-LEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp TTCEEETTEEECTTSC--C-----------SSCCSCCC--TTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCEEeCCEeEccCCC--c-----------CccCCCCC--CCCCEEEcCCCccCc-cCHHHhhCccCCcEEECCCCCCCC
Confidence 3467999999997532 1 11222221 445555555555552 223445555555555555555544
Q ss_pred cCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccCcCCCCCCCCcccc
Q 039922 136 ELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGYNPLKSSPLPSSVG 215 (973)
Q Consensus 136 ~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 215 (973)
..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+++.++ +..+.
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~-~~~~~ 156 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP-HGAFD 156 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC-TTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC-HHHHh
Confidence 44444555555555555555555444444555555555555555555 33444555555555555555554421 23445
Q ss_pred CcchhHHHhhccCccccc
Q 039922 216 NLSKLENLWAAKANLIGE 233 (973)
Q Consensus 216 ~l~~L~~L~l~~n~l~~~ 233 (973)
.+++|+.|++.+|.+...
T Consensus 157 ~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TCTTCCEEECTTSCBCTT
T ss_pred CCCCCCEEEeeCCCccCC
Confidence 555555555555554433
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=8.2e-19 Score=195.96 Aligned_cols=177 Identities=19% Similarity=0.186 Sum_probs=111.2
Q ss_pred hhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccC-CCCCccEEEeecCcccCCCCCCCCCCCCcceEeecC
Q 039922 388 QCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFW-GLPEVDFFEMYNNRFEGSISPSISNAPKLTGILING 466 (973)
Q Consensus 388 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~ 466 (973)
+.+++++|++.. +|..+. ..+++|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 356666676663 454443 3466777777777766666666 677777777777777666666666666666666666
Q ss_pred CcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCccc---CccccceeeeeccCcccC
Q 039922 467 NNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNL---NSLTALIVLNLSTNQLTG 543 (973)
Q Consensus 467 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 543 (973)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66665555566666666666666666665556666666666666666666664333333 446666666666666664
Q ss_pred CCCcccccccc--ccEEecCCCcCcc
Q 039922 544 TIPPELGNLAV--LTSLDLSSNLLTG 567 (973)
Q Consensus 544 ~~p~~~~~l~~--L~~L~Ls~N~l~~ 567 (973)
..+..|..++. |+.|+|++|+++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 44445555655 3666666666654
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=4.9e-21 Score=225.37 Aligned_cols=203 Identities=21% Similarity=0.154 Sum_probs=165.1
Q ss_pred cCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccE
Q 039922 358 GKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDF 437 (973)
Q Consensus 358 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 437 (973)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|......|.. +..+.+.+..|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 56788889999999987 67888888888888888666432111110 1122345567778888888888
Q ss_pred EE-eecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccc
Q 039922 438 FE-MYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENM 516 (973)
Q Consensus 438 L~-L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (973)
|+ ++.|.+. .|..+.+++|.++.. |. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 88 6776653 567777788877632 21 259999999999995 776 9999999999999999
Q ss_pred cccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCcccc-Chhhhcc-cccceeccCCcCcccCCC
Q 039922 517 FTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEI-PLELTKL-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 517 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l-~l~~l~l~~N~l~g~~p~ 594 (973)
|+ .+|..++.+++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.+ |..+..+ .|+.|++++|++++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99 889999999999999999999996 77 8999999999999999999887 9999999 999999999999988764
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6e-19 Score=197.07 Aligned_cols=177 Identities=22% Similarity=0.225 Sum_probs=127.3
Q ss_pred eEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCC-CCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcC
Q 039922 412 NYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSIS-NAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQ 490 (973)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 490 (973)
+.+++++|.++. +|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 567788887774 444332 3577788888888777777776 778888888888888776667777888888888888
Q ss_pred CcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccc---cccccccEEecCCCcCcc
Q 039922 491 NRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPEL---GNLAVLTSLDLSSNLLTG 567 (973)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 567 (973)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88876666677778888888888888887777778888888888888888875333334 567788888888888875
Q ss_pred ccChhhhcc-c--ccceeccCCcCccc
Q 039922 568 EIPLELTKL-K--LNQFNISHNKLYGE 591 (973)
Q Consensus 568 ~~p~~l~~l-~--l~~l~l~~N~l~g~ 591 (973)
..+..+..+ . ++.|++++|++.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred cCHHHhhhccHhhcceEEecCCCccCC
Confidence 444555555 2 47778888877653
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=3.3e-18 Score=177.76 Aligned_cols=156 Identities=21% Similarity=0.225 Sum_probs=122.1
Q ss_pred eeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcC
Q 039922 411 LNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQ 490 (973)
Q Consensus 411 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 490 (973)
.+.++.+++.++. +|..+. ++|+.|+|++|++++..+..+..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 4567777777763 333332 6777777777777777777778888888888888888766556678888888888888
Q ss_pred CcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccC
Q 039922 491 NRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888766677788888888888888888 778888888888888888888886666778888888999999998887654
No 368
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=1.7e-18 Score=178.75 Aligned_cols=153 Identities=20% Similarity=0.259 Sum_probs=131.1
Q ss_pred cEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeecccc
Q 039922 436 DFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQEN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.+++++|.++.. |..+. ++++.|++++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 5688888888754 44443 68999999999999777778999999999999999999888899999999999999999
Q ss_pred ccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCccc
Q 039922 516 MFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGE 591 (973)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~ 591 (973)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..+..+ .|+.|++++|++.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9996666778889999999999999998888899999999999999999997777778777 889999988887653
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=5e-18 Score=171.14 Aligned_cols=158 Identities=25% Similarity=0.306 Sum_probs=124.1
Q ss_pred CcceEeecCCcCCCCCch-hhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeee
Q 039922 458 KLTGILINGNNFTGEVPS-QICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNL 536 (973)
Q Consensus 458 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 536 (973)
++++|++++|++++..+. .+..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 677888888888766554 4888999999999999999888999999999999999999999888888999999999999
Q ss_pred ccCcccCCCCccccccccccEEecCCCcCccccChhhhcccccceeccCCcCcccCCCCCcccccccccCCCCCCCCCCC
Q 039922 537 STNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHNKLYGEVPSDFDHDLFISSLLDNPGLCSPDL 616 (973)
Q Consensus 537 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N~l~g~~p~~~~~~~~~~~~~~n~~~c~~~l 616 (973)
++|+|++.+|..|..+++|++|+|++|++++..+.......++...+..+...+..|..+.. .....+..+...|.++.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l~~-~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRD-VQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTTT-SBGGGSCTTTCCCCCC-
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHHcC-CChhhCcHhhcCcCCCC
Confidence 99999988899999999999999999999988764321113444456666677777765533 23344556666676543
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=4.4e-19 Score=215.53 Aligned_cols=196 Identities=16% Similarity=0.200 Sum_probs=87.4
Q ss_pred CccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEc
Q 039922 337 PNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRF 416 (973)
Q Consensus 337 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 416 (973)
+.++.|+|.+|.+.. .+. ..|+.++|+.|.|.+ +++..|++. ..+..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 446666666666653 222 234455566655542 233344444 45666777777777777
Q ss_pred cCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCC
Q 039922 417 GGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGH 496 (973)
Q Consensus 417 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 496 (973)
++|.+. .+|..++.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 777776 44444556666666666666666 45566666666666666666666 55666666666666666666665 5
Q ss_pred CccccccccccceeeccccccccccCcccCcccc-ceeeeeccCcccCCCCccccccccccEEecCCC
Q 039922 497 LPTCITQLNKLQQLELQENMFTGELPRNLNSLTA-LIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSN 563 (973)
Q Consensus 497 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 563 (973)
+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.++|.+|.. |+.|++++|
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 5666666666666666666666666666554322 223566666666666543 344455555
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.7e-18 Score=182.40 Aligned_cols=127 Identities=18% Similarity=0.323 Sum_probs=54.1
Q ss_pred cCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCc
Q 039922 405 YGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQ 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 484 (973)
+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +.. ++|+.|++++|++++. + .+..+++|+
T Consensus 59 l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~ 131 (263)
T 1xeu_A 59 MQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLE 131 (263)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCC
T ss_pred HhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc--ccc-CcccEEEccCCccCCC-h-hhcCccccc
Confidence 4444455555555555543332 4444444444444444443211 111 4444444444444421 1 244444444
Q ss_pred EEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCccc
Q 039922 485 AVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLT 542 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (973)
+|+|++|++++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.++
T Consensus 132 ~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 132 ILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp EEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred EEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 44444444442 22 344444444444444444432 33444444444444444444
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=7.2e-18 Score=170.92 Aligned_cols=154 Identities=19% Similarity=0.257 Sum_probs=93.3
Q ss_pred cCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCc
Q 039922 405 YGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQ 484 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 484 (973)
.+.+++|++|++++|.++ .+| .+..+++|+.|++++|.++. ++.+..+++|++|++++|.+++..|..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 355667777777777776 333 46666666666666665542 33555666666666666666655556666666666
Q ss_pred EEeCcCCcccCCCccccccccccceeeccccc-cccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCC
Q 039922 485 AVDLSQNRFSGHLPTCITQLNKLQQLELQENM-FTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSN 563 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 563 (973)
+|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 66666666665556666666666666666665 43 344 45666666666666666653 33 5566666666666666
Q ss_pred cCc
Q 039922 564 LLT 566 (973)
Q Consensus 564 ~l~ 566 (973)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 654
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=6.7e-18 Score=179.33 Aligned_cols=171 Identities=17% Similarity=0.177 Sum_probs=114.5
Q ss_pred ccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceE
Q 039922 383 FRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGI 462 (973)
Q Consensus 383 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 462 (973)
.+.++..+++++|.+.+.. .+..+++|++|++++|.++.. + .+..+++|+.|++++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3445666666666666432 567788888888888888743 3 57777788888888877776544 6777777777
Q ss_pred eecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCccc
Q 039922 463 LINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLT 542 (973)
Q Consensus 463 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (973)
++++|++++ +|.. .. ++|++|+|++|++++ +| .+..+++|+.|+|++|++++. | .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 777777764 3322 22 667777777777764 33 466677777777777777643 3 5666777777777777776
Q ss_pred CCCCccccccccccEEecCCCcCccc
Q 039922 543 GTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 543 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
+. ..+..+++|+.|+|++|++++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 5566677777777777776643
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.2e-17 Score=176.94 Aligned_cols=138 Identities=21% Similarity=0.204 Sum_probs=106.2
Q ss_pred CCccccccccCCeeEEEEEE-CCCCE--EEEEEecCCCCCc----------------------hhHHHHHHHHHHHhcCC
Q 039922 684 LTEQNLIGSGGSCRVYKVKL-KSGET--VAVKRLLGGTHKP----------------------ETETVFRSEIETLGRVR 738 (973)
Q Consensus 684 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~e~~~l~~l~ 738 (973)
|...+.||+|+||.||+|.. .+|+. ||||++....... .....+.+|+..+++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999998 68999 9999875332110 11246889999999998
Q ss_pred CCCe--eeEEeEEecCCeeEEEEeccCC-C----ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCeEEe
Q 039922 739 HGNV--VKLLMCCSGQDFNILVYEYMPN-G----SLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLH-NDCVPAIVHR 810 (973)
Q Consensus 739 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~ 810 (973)
|+++ ..++++ +..++||||+++ | +|.++... .++..+..++.|++.|++||| +. +|+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 8754 344432 356899999952 4 66655432 234566789999999999999 88 99999
Q ss_pred CCCCCCEEeCCCCceEEeccCcchhc
Q 039922 811 DVKSHNILLDAEMVPRVADFGLAKAL 836 (973)
Q Consensus 811 Dlkp~NIll~~~~~~kl~DfGl~~~~ 836 (973)
||||+|||+++ .++|+|||++...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999998654
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.9e-17 Score=167.87 Aligned_cols=154 Identities=19% Similarity=0.258 Sum_probs=135.4
Q ss_pred cCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccc
Q 039922 429 FWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQ 508 (973)
Q Consensus 429 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 508 (973)
...+++|+.|++++|+++. ++ .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 3567899999999999994 34 6899999999999999776 345889999999999999999988899999999999
Q ss_pred eeeccccccccccCcccCccccceeeeeccCc-ccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCC
Q 039922 509 QLELQENMFTGELPRNLNSLTALIVLNLSTNQ-LTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHN 586 (973)
Q Consensus 509 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N 586 (973)
+|+|++|++++..|..+..+++|+.|+|++|+ ++ .+| .+..+++|+.|++++|++++ +| .+..+ +|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 99999999999899999999999999999998 65 566 79999999999999999995 55 67777 8999999999
Q ss_pred cCcc
Q 039922 587 KLYG 590 (973)
Q Consensus 587 ~l~g 590 (973)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9764
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.5e-17 Score=167.55 Aligned_cols=154 Identities=21% Similarity=0.289 Sum_probs=128.4
Q ss_pred ceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCcc-ccccccccceeeccccccccccCcccCccccceeeeecc
Q 039922 460 TGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPT-CITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLST 538 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (973)
+.+++++|.++ .+|..+.. +|++|++++|+|++..+. .|+.+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888886 67766543 899999999999976654 489999999999999999999999999999999999999
Q ss_pred CcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCCCCCccc-ccccccCCCCCCCCCCC
Q 039922 539 NQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVPSDFDHD-LFISSLLDNPGLCSPDL 616 (973)
Q Consensus 539 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p~~~~~~-~~~~~~~~n~~~c~~~l 616 (973)
|+|++..|..|..+++|++|+|++|++++.+|..+..+ .|+.|++++|+++|..+-.+... .....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99998888889999999999999999999999999998 99999999999999877432111 11223444555666543
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.6e-17 Score=183.15 Aligned_cols=221 Identities=14% Similarity=0.067 Sum_probs=101.4
Q ss_pred CCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCc----cCCCCCCccCCccee
Q 039922 336 NPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNR----FSGKIPESYGECKTL 411 (973)
Q Consensus 336 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~----l~~~~p~~~~~l~~L 411 (973)
+++|+.|+|.+ .++...+.+|.++++|+.+++++|.+....+..|....++..+.+..+. ........|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66777777766 6665555566667777777777776665555555554444444433311 111223334444444
Q ss_pred e-EEEccCCcc-ccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCc
Q 039922 412 N-YLRFGGNEL-QGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLS 489 (973)
Q Consensus 412 ~-~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 489 (973)
+ .+.+....- ............+++.+.+.++-...........+++|+.+++++|+++...+..|.++.+|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 4 333332211 00000001112333444433321100000000113455555555555554444445555555555555
Q ss_pred CCcccCCCccccccccccc-eeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEe
Q 039922 490 QNRFSGHLPTCITQLNKLQ-QLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLD 559 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 559 (973)
+| ++.+.+.+|.++++|+ .+++.+ +++...+.+|.++++|+.|++++|+++...+.+|.++++|+.++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 54 4434444555555555 555554 44434445555555555555555555543344555555555544
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=2.7e-17 Score=181.26 Aligned_cols=282 Identities=15% Similarity=0.138 Sum_probs=144.2
Q ss_pred cCCccEEecccccccccCCccccC-CCCCCEEECcCCcCC--CCCCcccCCCCcccEEecCCcccCCcccccccc-----
Q 039922 120 CFHLQVLALDYNVFIGELPDFSRE-FANLQVLDLSRNNFS--GDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGN----- 191 (973)
Q Consensus 120 l~~L~~L~L~~n~~~~~~~~~~~~-l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~----- 191 (973)
+.+++.|.++++--... ...+.. +++|++|||++|++. ...+ +.++.++.+.+..|.|. +.+|.+
T Consensus 24 ~~~l~~L~l~g~i~~~~-~~~l~~~l~~L~~LdLs~n~i~~~~~~~---~~~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKLNAED-FRHLRDEFPSLKVLDISNAEIKMYSGKA---GTYPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEECHHH-HHHHHHSCTTCCEEEEEEEEECCEEESS---SSSGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEeccccHHH-HHHHHHhhccCeEEecCcceeEEecCcc---ccccccccccccccccC---HHHhccccccc
Confidence 45566676665421111 112222 566777777777666 2111 22233455555555332 344555
Q ss_pred ---cccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCC
Q 039922 192 ---LTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASI 268 (973)
Q Consensus 192 ---l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 268 (973)
+++|+.|+|.. .++ ..-+.+|.++++|+.|++++|.++...+..|.+..++
T Consensus 97 ~~g~~~L~~l~L~~-~i~-------------------------~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l 150 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIK-------------------------NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTA 150 (329)
T ss_dssp EEECTTCCC-CBCT-TCC-------------------------EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCE
T ss_pred ccccCCCcEEECCc-ccc-------------------------chhHHHhhcCcccceEEcCCCCccccchhhhcCCCce
Confidence 56666555554 333 2334567777778888888887776777777777666
Q ss_pred CEEEccCCcC----cccCchhccCCCccc-eeeccccccCCCChhhhh-----cccCcEEEccCCcCCCCCCccccCCCc
Q 039922 269 EQIELFDNQL----SGELPESLSNLTTLL-RLDISQNNLTGNLPETIA-----AMSLESLNLNDNYFTGEIPESLASNPN 338 (973)
Q Consensus 269 ~~L~L~~n~l----~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~-----~~~L~~L~L~~N~l~~~~p~~~~~l~~ 338 (973)
..+.+..+.. .......|.++..|+ .+++... +.++..+. ..++..+.+.++-...........+++
T Consensus 151 ~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~ 227 (329)
T 3sb4_A 151 IFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPN 227 (329)
T ss_dssp EEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTT
T ss_pred EEecCcchhhhhccccccccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCC
Confidence 6666555321 222233455555555 3443322 12222221 124555555544221111111112566
Q ss_pred cceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceee-EEEcc
Q 039922 339 LVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLN-YLRFG 417 (973)
Q Consensus 339 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~-~L~L~ 417 (973)
|+.|+|++|+++...+..|.++++|+.++|.+| ++...+. +|.++++|+ .+++.
T Consensus 228 L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~------------------------aF~~~~~L~~~l~l~ 282 (329)
T 3sb4_A 228 LVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQR------------------------VFSNCGRLAGTLELP 282 (329)
T ss_dssp CCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTT------------------------TTTTCTTCCEEEEEC
T ss_pred CeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHH------------------------HhhCChhccEEEEEc
Confidence 777777777666555556666777777777666 5544444 444455554 55554
Q ss_pred CCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEe
Q 039922 418 GNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGIL 463 (973)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 463 (973)
+ .++.+.+..|.++++|+.++++.|+++...+..|.++++|+.++
T Consensus 283 ~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 283 A-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp T-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred c-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 4 44444445555555555555555555545455555555555543
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.1e-16 Score=155.70 Aligned_cols=135 Identities=23% Similarity=0.252 Sum_probs=68.4
Q ss_pred ceeeEEEccCCccc-cccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEe
Q 039922 409 KTLNYLRFGGNELQ-GELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVD 487 (973)
Q Consensus 409 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 487 (973)
++|++|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~ 77 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--------------------------SNLPKLPKLKKLE 77 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--------------------------SSCCCCSSCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--------------------------hhhccCCCCCEEE
Confidence 45555666666555 34444444444444444444444432 3344444555555
Q ss_pred CcCCcccCCCccccccccccceeecccccccccc-CcccCccccceeeeeccCcccCCCC---ccccccccccEEecCCC
Q 039922 488 LSQNRFSGHLPTCITQLNKLQQLELQENMFTGEL-PRNLNSLTALIVLNLSTNQLTGTIP---PELGNLAVLTSLDLSSN 563 (973)
Q Consensus 488 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N 563 (973)
|++|++++.+|..+..+++|+.|+|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|
T Consensus 78 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 78 LSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp EESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred CcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 5555554444444444555555555555554321 1455555556666666666653322 25556666666666666
Q ss_pred cCccccC
Q 039922 564 LLTGEIP 570 (973)
Q Consensus 564 ~l~~~~p 570 (973)
.++ .+|
T Consensus 158 ~~~-~~~ 163 (168)
T 2ell_A 158 EDQ-EAP 163 (168)
T ss_dssp TSC-BCC
T ss_pred Chh-hcc
Confidence 655 344
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.1e-15 Score=150.51 Aligned_cols=137 Identities=21% Similarity=0.216 Sum_probs=95.3
Q ss_pred cCCchhhhcccCccC-CCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceE
Q 039922 384 RNKLQCIIIFNNRFS-GKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGI 462 (973)
Q Consensus 384 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 462 (973)
.++|+.|++++|++. +.+|..+..+++|++|++++|.+++. ..|..+++|+.|++++|++++.
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~-------------- 86 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGG-------------- 86 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSC--------------
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchH--------------
Confidence 378999999999998 78898899999999999999999976 7787788888777777777654
Q ss_pred eecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCC-ccccccccccceeeccccccccccC---cccCccccceeeeecc
Q 039922 463 LINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHL-PTCITQLNKLQQLELQENMFTGELP---RNLNSLTALIVLNLST 538 (973)
Q Consensus 463 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 538 (973)
+|..+..+++|++|+|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 87 ----------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 87 ----------LDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ----------CCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ----------HHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 3444444555666666666655321 1455566666666666666664333 3566666666666666
Q ss_pred CcccCCCCc
Q 039922 539 NQLTGTIPP 547 (973)
Q Consensus 539 N~l~~~~p~ 547 (973)
|.++ .+|.
T Consensus 157 n~~~-~~~~ 164 (168)
T 2ell_A 157 REDQ-EAPD 164 (168)
T ss_dssp TTSC-BCCS
T ss_pred CChh-hccc
Confidence 6665 3443
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=153.62 Aligned_cols=128 Identities=25% Similarity=0.392 Sum_probs=86.1
Q ss_pred cEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeecccc
Q 039922 436 DFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQEN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.+++++|+++. +|..+ .++|++|++++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 466777777763 33333 246777777777776 55666777777777777777777666666777777777777777
Q ss_pred ccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCcc
Q 039922 516 MFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTG 567 (973)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (973)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 7776666667777777777777777765444456667777777777777664
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=151.67 Aligned_cols=130 Identities=23% Similarity=0.335 Sum_probs=106.5
Q ss_pred ceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccC
Q 039922 460 TGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTN 539 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (973)
+.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57888888888 5666543 57888999999888 67788888889999999999998777788888899999999999
Q ss_pred cccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCC
Q 039922 540 QLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVP 593 (973)
Q Consensus 540 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p 593 (973)
+|++..|..|..+++|++|+|++|++++..+..+..+ .|+.|++++|++.+..+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9987777788888999999999999885555557777 88889999998876543
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=5.1e-16 Score=149.45 Aligned_cols=110 Identities=24% Similarity=0.200 Sum_probs=57.3
Q ss_pred CCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccc-cCcccCcc
Q 039922 450 SPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGE-LPRNLNSL 528 (973)
Q Consensus 450 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l 528 (973)
|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|+.|++++|++++. .|..+..+
T Consensus 35 ~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l 112 (149)
T 2je0_A 35 EGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKL 112 (149)
T ss_dssp CSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGC
T ss_pred HHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhC
Confidence 33334444444444444444433 3444555555555555555544555555555555555555555542 23555556
Q ss_pred ccceeeeeccCcccCCCC---ccccccccccEEecC
Q 039922 529 TALIVLNLSTNQLTGTIP---PELGNLAVLTSLDLS 561 (973)
Q Consensus 529 ~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 561 (973)
++|+.|++++|++++..+ ..+..+++|+.||++
T Consensus 113 ~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 113 ENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666666666654333 345566666666654
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.8e-15 Score=148.96 Aligned_cols=114 Identities=26% Similarity=0.254 Sum_probs=90.7
Q ss_pred CCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeee
Q 039922 457 PKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNL 536 (973)
Q Consensus 457 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 536 (973)
++|+.|++++|++++..+..+..+++|++|++++|++++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 56777777777777666666777888888888888888666666788888888888888888777777888888888888
Q ss_pred ccCcccCCCCccccccccccEEecCCCcCccccC
Q 039922 537 STNQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 537 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8888886555567888888888998888887665
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=2.7e-15 Score=149.06 Aligned_cols=132 Identities=23% Similarity=0.278 Sum_probs=114.4
Q ss_pred cceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeecc
Q 039922 459 LTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLST 538 (973)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (973)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|+.+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467788888887 455444 36899999999999977777889999999999999999977778889999999999999
Q ss_pred CcccCCCCccccccccccEEecCCCcCccccChhhhcc-cccceeccCCcCcccCC
Q 039922 539 NQLTGTIPPELGNLAVLTSLDLSSNLLTGEIPLELTKL-KLNQFNISHNKLYGEVP 593 (973)
Q Consensus 539 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p 593 (973)
|+|++..+..|..+++|++|+|++|++++..+..+..+ .|+.|++++|+++|..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99998777788999999999999999996555556777 89999999999998776
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.9e-15 Score=145.52 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=111.0
Q ss_pred cceeeEEEccCCccc-cccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEE
Q 039922 408 CKTLNYLRFGGNELQ-GELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAV 486 (973)
Q Consensus 408 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 486 (973)
.++|++|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367888888888887 67777888888888888888888876 778889999999999999998788888889999999
Q ss_pred eCcCCcccCC-CccccccccccceeeccccccccccC---cccCccccceeeeecc
Q 039922 487 DLSQNRFSGH-LPTCITQLNKLQQLELQENMFTGELP---RNLNSLTALIVLNLST 538 (973)
Q Consensus 487 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 538 (973)
++++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 34889999999999999999997666 5789999999999874
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=3.3e-15 Score=163.45 Aligned_cols=136 Identities=14% Similarity=0.124 Sum_probs=100.6
Q ss_pred CCccccccccCCeeEEEEEECCCCEEEEEEecCCCCC------------c--------hhHHHHHHHHHHHhcCCCCCee
Q 039922 684 LTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHK------------P--------ETETVFRSEIETLGRVRHGNVV 743 (973)
Q Consensus 684 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~--------~~~~~~~~e~~~l~~l~h~niv 743 (973)
|.+.+.||+|+||.||+|...+|+.||||+++..... . ..+....+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7788999999999999999999999999987532100 0 0112234677777777655432
Q ss_pred --eEEeEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCC
Q 039922 744 --KLLMCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDA 821 (973)
Q Consensus 744 --~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 821 (973)
+.+++ ...++||||+++++|.++... .....++.|++.++.|||+. |||||||||.|||+++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCeeeec----cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 22322 124799999998888765321 12346789999999999999 9999999999999988
Q ss_pred CC----------ceEEeccCcchh
Q 039922 822 EM----------VPRVADFGLAKA 835 (973)
Q Consensus 822 ~~----------~~kl~DfGl~~~ 835 (973)
++ .+.|+||+-+..
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCcccccccccceEEEEeCCccc
Confidence 76 389999997654
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=1.8e-14 Score=161.98 Aligned_cols=264 Identities=10% Similarity=0.090 Sum_probs=154.0
Q ss_pred CCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeec
Q 039922 266 ASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLF 345 (973)
Q Consensus 266 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 345 (973)
..++.+.+.+ .++.+...+|.+. +|+.+++..| ++......|...+|+.+.+.+ .++...+.+|.++++|+.++++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~ 188 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLS 188 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECT
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecC
Confidence 4555666554 3444556667764 6888888766 655555566555677777765 5554555667777777777777
Q ss_pred cccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCcccccc
Q 039922 346 NNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGEL 425 (973)
Q Consensus 346 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 425 (973)
+|+++......|. .++|+.+.|..+ ++.. ...+|.++++|+.+.+..| ++...
T Consensus 189 ~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I------------------------~~~aF~~~~~L~~l~l~~~-l~~I~ 241 (401)
T 4fdw_A 189 KTKITKLPASTFV-YAGIEEVLLPVT-LKEI------------------------GSQAFLKTSQLKTIEIPEN-VSTIG 241 (401)
T ss_dssp TSCCSEECTTTTT-TCCCSEEECCTT-CCEE------------------------CTTTTTTCTTCCCEECCTT-CCEEC
T ss_pred CCcceEechhhEe-ecccCEEEeCCc-hhee------------------------hhhHhhCCCCCCEEecCCC-ccCcc
Confidence 7776643333444 466666666533 4333 3344555555555555543 44444
Q ss_pred CcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCC-----CCCchhhhcCCcCcEEeCcCCcccCCCccc
Q 039922 426 PSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFT-----GEVPSQICTLRQLQAVDLSQNRFSGHLPTC 500 (973)
Q Consensus 426 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 500 (973)
...|.+ .+|+.+.+ .+.++......|.++++|+.+.+.+|.+. ...+..|.++++|+.++|.+ .++.....+
T Consensus 242 ~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~a 318 (401)
T 4fdw_A 242 QEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGL 318 (401)
T ss_dssp TTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTT
T ss_pred cccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhh
Confidence 455555 45555555 23344444555555666666666555443 23445566666777777763 355455566
Q ss_pred cccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccc-cccEEecCCCcC
Q 039922 501 ITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLA-VLTSLDLSSNLL 565 (973)
Q Consensus 501 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l 565 (973)
|.++++|+.++|..| ++...+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..|.+
T Consensus 319 F~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 319 LGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 666677777777444 554555666666 677777777766655555566553 556666655544
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.57 E-value=8.7e-14 Score=157.20 Aligned_cols=333 Identities=11% Similarity=0.037 Sum_probs=169.2
Q ss_pred cCCcCcCCCcCCccEEecccccccccCCccccCCCCCCEEECcCCcCCCCCCcccCCCCcccEEecCCcccCCccccccc
Q 039922 111 TLSSQSLSPCFHLQVLALDYNVFIGELPDFSREFANLQVLDLSRNNFSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLG 190 (973)
Q Consensus 111 ~~~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 190 (973)
.|...+|.+|.+|+.+.+..+ +..+-..+|.++++|+.++|.++ ++.....+|.++++|+.+.+..+ +..+...+|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 455566777777777777543 44444556666667777766543 44344455666666666665543 3333344454
Q ss_pred ccccccEeeccCcCCCCCCCCccccCcchhHHHhhccCcccccCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCE
Q 039922 191 NLTELTHFELGYNPLKSSPLPSSVGNLSKLENLWAAKANLIGEIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQ 270 (973)
Q Consensus 191 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 270 (973)
+...+........ ...-..+|.++++|+.+.+.++. .......|.++.+|+.
T Consensus 138 ~~~~~~~~~~~~~---------------------------~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~ 189 (394)
T 4fs7_A 138 GCDFKEITIPEGV---------------------------TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKS 189 (394)
T ss_dssp TCCCSEEECCTTC---------------------------CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCB
T ss_pred cccccccccCccc---------------------------cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceE
Confidence 4432222211111 11112356667777777776543 3355566777777777
Q ss_pred EEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcEEEccCCcCCCCCCccccCCCccceeeecccccc
Q 039922 271 IELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFS 350 (973)
Q Consensus 271 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 350 (973)
+.+..| ++.+...+|.++..|+.+.+..+... .....+...+|+.+.+..+ ++......|..+++|+.+.+..+...
T Consensus 190 i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~ 266 (394)
T 4fs7_A 190 IKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR 266 (394)
T ss_dssp CCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE
T ss_pred EEcCCC-ceEeCchhhccccccceeecCCCceE-eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce
Confidence 777665 44355566777777777766554332 1111222234444444322 11122233444444444444433322
Q ss_pred CCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccC
Q 039922 351 GKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFW 430 (973)
Q Consensus 351 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 430 (973)
.....|..+..++.+....+.+ ....|..+.+|+.+.+..+ ++...
T Consensus 267 -i~~~~F~~~~~l~~~~~~~~~i---------------------------~~~~F~~~~~L~~i~l~~~-i~~I~----- 312 (394)
T 4fs7_A 267 -IGGSLFYNCSGLKKVIYGSVIV---------------------------PEKTFYGCSSLTEVKLLDS-VKFIG----- 312 (394)
T ss_dssp -ECSCTTTTCTTCCEEEECSSEE---------------------------CTTTTTTCTTCCEEEECTT-CCEEC-----
T ss_pred -eeccccccccccceeccCceee---------------------------ccccccccccccccccccc-cceec-----
Confidence 2223333333333333322211 1123344444444444332 33233
Q ss_pred CCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCcccccccccccee
Q 039922 431 GLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQL 510 (973)
Q Consensus 431 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (973)
..+|.++.+|+.+.+..+ ++......|.++.+|+.+++..| ++.....+|.++++|+.+
T Consensus 313 -------------------~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 313 -------------------EEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKV 371 (394)
T ss_dssp -------------------TTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEE
T ss_pred -------------------hhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEE
Confidence 344555555555555422 44344456666777777777665 554455677777777777
Q ss_pred eccccccccccCcccCccccceee
Q 039922 511 ELQENMFTGELPRNLNSLTALIVL 534 (973)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L 534 (973)
++..+ ++ .+..+|.++++|+.+
T Consensus 372 ~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 372 ELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EECCC-CE-EhhheecCCCCCcEE
Confidence 77654 33 345567777777654
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=5.9e-14 Score=157.75 Aligned_cols=249 Identities=14% Similarity=0.133 Sum_probs=161.0
Q ss_pred CccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhccc
Q 039922 235 PDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMS 314 (973)
Q Consensus 235 p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 314 (973)
..+|.+. +|+.+.+..+ ++.+...+|.+. +|+.+.+.+ .++.+.+.+|.++++|+.++++.|+++......|...+
T Consensus 129 ~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~ 204 (401)
T 4fdw_A 129 KDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAG 204 (401)
T ss_dssp TTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCC
T ss_pred HhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecc
Confidence 3456654 6888888776 766667778774 688888886 66666777888888999999988888866666666667
Q ss_pred CcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhccc
Q 039922 315 LESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFN 394 (973)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 394 (973)
|+.+.|.++ ++.....+|.++++|+.+++.+| ++.....+|.+ .+|+.+.+. +.++.....
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~--------------- 265 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASR--------------- 265 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTT---------------
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChh---------------
Confidence 888888744 66566667777888888888764 44344455655 667777773 344434344
Q ss_pred CccCCCCCCccCCcceeeEEEccCCccc-----cccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcC
Q 039922 395 NRFSGKIPESYGECKTLNYLRFGGNELQ-----GELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNF 469 (973)
Q Consensus 395 n~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l 469 (973)
+|.+|++|+.+.+.+|.+. ...+..|.++++|+.+++.+ .++......|.++++|+.+.+..| +
T Consensus 266 ---------aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l 334 (401)
T 4fdw_A 266 ---------AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-V 334 (401)
T ss_dssp ---------TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-C
T ss_pred ---------HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-c
Confidence 4445555555555444443 34455566666666666653 355455556666666666666433 5
Q ss_pred CCCCchhhhcCCcCcEEeCcCCcccCCCcccccccc-ccceeeccccccc
Q 039922 470 TGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLN-KLQQLELQENMFT 518 (973)
Q Consensus 470 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 518 (973)
+...+..|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 335 ~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 335 TQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 54455566666 677777777766655555666663 5667777666654
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=6.8e-15 Score=145.93 Aligned_cols=105 Identities=23% Similarity=0.225 Sum_probs=49.7
Q ss_pred CcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCc--ccCccccceeee
Q 039922 458 KLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPR--NLNSLTALIVLN 535 (973)
Q Consensus 458 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~ 535 (973)
+|+.|++++|.+++. ..+..+++|++|+|++|+|++..|..+..+++|+.|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 344444444444322 23444445555555555554332233345555555555555553 3333 445555555555
Q ss_pred eccCcccCCCCcc----ccccccccEEecCCCcCc
Q 039922 536 LSTNQLTGTIPPE----LGNLAVLTSLDLSSNLLT 566 (973)
Q Consensus 536 Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 566 (973)
+++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 5555554 33442 555555555555555544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.1e-14 Score=144.33 Aligned_cols=133 Identities=21% Similarity=0.223 Sum_probs=113.4
Q ss_pred CCCCCCCCcceEeecCCcCCCCCchhhhcC-CcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccc
Q 039922 451 PSISNAPKLTGILINGNNFTGEVPSQICTL-RQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLT 529 (973)
Q Consensus 451 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (973)
..+.++++|+.|++++|+++. +|. +..+ ++|++|++++|+|++. ..++.+++|+.|+|++|+|++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 445667788888888888884 454 4444 4999999999999964 6899999999999999999976556679999
Q ss_pred cceeeeeccCcccCCCCc--cccccccccEEecCCCcCccccChh----hhcc-cccceeccCCcCc
Q 039922 530 ALIVLNLSTNQLTGTIPP--ELGNLAVLTSLDLSSNLLTGEIPLE----LTKL-KLNQFNISHNKLY 589 (973)
Q Consensus 530 ~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l-~l~~l~l~~N~l~ 589 (973)
+|+.|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|.. +..+ .|+.|++++|...
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999999997 5776 8999999999999999998 67775 7777 8999999999875
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.6e-16 Score=161.15 Aligned_cols=115 Identities=21% Similarity=0.280 Sum_probs=70.0
Q ss_pred CCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccc
Q 039922 452 SISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTAL 531 (973)
Q Consensus 452 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (973)
.+..+++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+..+++|+.|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 45555555566666655554 44 5666666666666666666 456666666666666666666664 33 46666666
Q ss_pred eeeeeccCcccCCCC-ccccccccccEEecCCCcCccccCh
Q 039922 532 IVLNLSTNQLTGTIP-PELGNLAVLTSLDLSSNLLTGEIPL 571 (973)
Q Consensus 532 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~ 571 (973)
+.|+|++|++++..+ ..+..+++|++|++++|++++.+|.
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 666666666663211 3566666666666666666665554
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.6e-16 Score=161.11 Aligned_cols=161 Identities=21% Similarity=0.217 Sum_probs=114.3
Q ss_pred cccCCchhhhcccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcce
Q 039922 382 CFRNKLQCIIIFNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTG 461 (973)
Q Consensus 382 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 461 (973)
.....++.+++..+.+.+..|. ++ .+|..|..+++|+.|++++|++++ +| .+..+++|+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~-----------------l~-~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~ 74 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPP-----------------IE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRI 74 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTT-----------------CC-CCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCE
T ss_pred HhcccccCcchheeEeccccCc-----------------Hh-hhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCE
Confidence 3445666666666666655544 00 111245555555555555555554 33 6666677777
Q ss_pred EeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccC-cccCccccceeeeeccCc
Q 039922 462 ILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELP-RNLNSLTALIVLNLSTNQ 540 (973)
Q Consensus 462 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~ 540 (973)
|++++|.++ .+|..+..+++|++|++++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.
T Consensus 75 L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 75 LSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp EEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred EECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 777777776 567777778899999999999985 55 68889999999999999985433 578889999999999999
Q ss_pred ccCCCCcc----------ccccccccEEecCCCcCcc
Q 039922 541 LTGTIPPE----------LGNLAVLTSLDLSSNLLTG 567 (973)
Q Consensus 541 l~~~~p~~----------~~~l~~L~~L~Ls~N~l~~ 567 (973)
+++.+|.. +..+++|+.|| +|.++.
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 152 LYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred cccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 98776653 78899999887 777763
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=8.5e-13 Score=149.05 Aligned_cols=315 Identities=11% Similarity=0.057 Sum_probs=203.5
Q ss_pred cCCccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhc
Q 039922 233 EIPDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAA 312 (973)
Q Consensus 233 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 312 (973)
.-..+|.++.+|+.+.|..+ ++.+...+|.++++|+.+++.++ ++.+...+|.++.+|+.+.+..+ +.......|..
T Consensus 62 Ig~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 33456777788888888643 66566677888888888888755 55455667778888887776644 33333444444
Q ss_pred ccCcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhc
Q 039922 313 MSLESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIII 392 (973)
Q Consensus 313 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 392 (973)
..+.......+ +......+|.++++|+.+.+.++..+ .....|.++.+|+.+++..| ++......|.....|+.+.+
T Consensus 139 ~~~~~~~~~~~-~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 139 CDFKEITIPEG-VTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF 215 (394)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC
T ss_pred ccccccccCcc-ccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeec
Confidence 44444333322 22233456778888888888765433 45557778888888888766 55455666777777777777
Q ss_pred ccCccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCC
Q 039922 393 FNNRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGE 472 (973)
Q Consensus 393 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 472 (973)
.++... +........+|+.+.+..+ ++......|.+...++.+.+..+... .....|..+..++.+....+.+.
T Consensus 216 ~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~-- 289 (394)
T 4fs7_A 216 PNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP-- 289 (394)
T ss_dssp CTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC--
T ss_pred CCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec--
Confidence 655432 3334445567777777543 34455667777778888777666433 44566777777777776655432
Q ss_pred CchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCcccccc
Q 039922 473 VPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNL 552 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 552 (973)
...|..+.+|+.+.+..+ ++.+...+|.++++|+.++|.++ ++.....+|.++++|+.+++..| ++..-..+|.++
T Consensus 290 -~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 365 (394)
T 4fs7_A 290 -EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGC 365 (394)
T ss_dssp -TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTC
T ss_pred -cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCC
Confidence 235666777777777655 54455567777777887777644 65455667777778888777766 554445677777
Q ss_pred ccccEEecCCC
Q 039922 553 AVLTSLDLSSN 563 (973)
Q Consensus 553 ~~L~~L~Ls~N 563 (973)
++|+.+++..|
T Consensus 366 ~~L~~i~lp~~ 376 (394)
T 4fs7_A 366 INLKKVELPKR 376 (394)
T ss_dssp TTCCEEEEEGG
T ss_pred CCCCEEEECCC
Confidence 77777777544
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=7.9e-14 Score=137.13 Aligned_cols=109 Identities=27% Similarity=0.293 Sum_probs=89.4
Q ss_pred cceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeecc
Q 039922 459 LTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLST 538 (973)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (973)
.+.+++++|.++ .+|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456777777777 466555 37888899999999887788888899999999999999877777788899999999999
Q ss_pred CcccCCCCccccccccccEEecCCCcCccccC
Q 039922 539 NQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 539 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 570 (973)
|+|++..+..|..+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99987666678899999999999999986543
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.3e-13 Score=135.57 Aligned_cols=109 Identities=28% Similarity=0.267 Sum_probs=98.4
Q ss_pred cCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecC
Q 039922 482 QLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLS 561 (973)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 561 (973)
..+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4679999999999 6787774 899999999999998889999999999999999999998777788999999999999
Q ss_pred CCcCccccChhhhcc-cccceeccCCcCcccCC
Q 039922 562 SNLLTGEIPLELTKL-KLNQFNISHNKLYGEVP 593 (973)
Q Consensus 562 ~N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~p 593 (973)
+|+|++..|..+..+ +|+.|++++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999997666678888 99999999999987665
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.8e-13 Score=135.01 Aligned_cols=106 Identities=27% Similarity=0.276 Sum_probs=86.2
Q ss_pred ceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccC
Q 039922 460 TGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTN 539 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 539 (973)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777775 5666553 78888889999888877888888889999999999998766667788999999999999
Q ss_pred cccCCCCccccccccccEEecCCCcCccc
Q 039922 540 QLTGTIPPELGNLAVLTSLDLSSNLLTGE 568 (973)
Q Consensus 540 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 568 (973)
+|++..+..|..+++|++|+|++|+++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99865555688899999999999998853
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3.5e-13 Score=132.94 Aligned_cols=107 Identities=26% Similarity=0.284 Sum_probs=95.3
Q ss_pred CcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCC
Q 039922 483 LQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSS 562 (973)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 562 (973)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999997 7888775 8999999999999988899999999999999999999976666789999999999999
Q ss_pred CcCccccChhhhcc-cccceeccCCcCcccC
Q 039922 563 NLLTGEIPLELTKL-KLNQFNISHNKLYGEV 592 (973)
Q Consensus 563 N~l~~~~p~~l~~l-~l~~l~l~~N~l~g~~ 592 (973)
|+|++..|..+..+ +|+.|++++|++.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 99996555558888 8999999999988644
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=1.6e-10 Score=130.38 Aligned_cols=87 Identities=11% Similarity=0.148 Sum_probs=41.8
Q ss_pred CCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccc
Q 039922 450 SPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLT 529 (973)
Q Consensus 450 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (973)
...|.++.+|+.+.+..+ ++.+....|.++.+|+.+.+..+ ++.+-..+|.++++|+.+++.+|.... ..+....
T Consensus 304 ~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~ 378 (394)
T 4gt6_A 304 ESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDS 378 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCC
T ss_pred ceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccC
Confidence 344444555555555432 33333445666666666666543 443445566666667776666665431 3455566
Q ss_pred cceeeeeccCcc
Q 039922 530 ALIVLNLSTNQL 541 (973)
Q Consensus 530 ~L~~L~Ls~N~l 541 (973)
+|+.+.+..|.+
T Consensus 379 ~L~~i~i~~~~~ 390 (394)
T 4gt6_A 379 GLQNLPVAPGSI 390 (394)
T ss_dssp CC----------
T ss_pred CCCEEEeCCCCE
Confidence 677666666554
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=4.1e-14 Score=157.48 Aligned_cols=166 Identities=17% Similarity=0.135 Sum_probs=97.0
Q ss_pred eeeEEEccCCccccccCcccCCC-----CCccEEEeecCcccCCCCCCC-CCCCCcceEeecCCcCCCCCchhhh-----
Q 039922 410 TLNYLRFGGNELQGELPSKFWGL-----PEVDFFEMYNNRFEGSISPSI-SNAPKLTGILINGNNFTGEVPSQIC----- 478 (973)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~p~~~~----- 478 (973)
.|++|+|++|.++......+... ++|+.|+|++|.++......+ ..+++|+.|+|++|.++......++
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 45555555555554333222211 355555555555542211111 1234566777777776644434432
Q ss_pred cCCcCcEEeCcCCcccC----CCccccccccccceeeccccccccc----cCcccCccccceeeeeccCcccCC----CC
Q 039922 479 TLRQLQAVDLSQNRFSG----HLPTCITQLNKLQQLELQENMFTGE----LPRNLNSLTALIVLNLSTNQLTGT----IP 546 (973)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 546 (973)
..++|++|+|++|.|+. .++..+..+++|++|+|++|+|++. ++..+...++|+.|+|++|.|++. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 34678888888887763 2344445677788888888887753 355566677788888888888642 33
Q ss_pred ccccccccccEEecCCCcCccccChhhhc
Q 039922 547 PELGNLAVLTSLDLSSNLLTGEIPLELTK 575 (973)
Q Consensus 547 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 575 (973)
..+...++|++|||++|+|+..-...+..
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 44455677888888888887654444443
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=4.8e-12 Score=140.39 Aligned_cols=131 Identities=18% Similarity=0.136 Sum_probs=96.8
Q ss_pred eEeecCC-cCCCCCchhhhcCCcCcEEeCcC-CcccCCCccccccccccceeeccccccccccCcccCccccceeeeecc
Q 039922 461 GILINGN-NFTGEVPSQICTLRQLQAVDLSQ-NRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLST 538 (973)
Q Consensus 461 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 538 (973)
.++++++ +++ .+|. +..+++|++|+|++ |+|++..|..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 777 4777 88888899999986 889877778888999999999999999988888889999999999999
Q ss_pred CcccCCCCccccccccccEEecCCCcCccccC-hhhhcc-cccceeccCCcCcccCCC
Q 039922 539 NQLTGTIPPELGNLAVLTSLDLSSNLLTGEIP-LELTKL-KLNQFNISHNKLYGEVPS 594 (973)
Q Consensus 539 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l-~l~~l~l~~N~l~g~~p~ 594 (973)
|+|++..|..|..++ |+.|+|++|++...-. ..+... ......+..+.+++..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999865556666666 9999999999885432 122222 223333444555555544
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=6e-12 Score=139.59 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=96.8
Q ss_pred cEEeCcCC-cccCCCccccccccccceeeccc-cccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecC
Q 039922 484 QAVDLSQN-RFSGHLPTCITQLNKLQQLELQE-NMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLS 561 (973)
Q Consensus 484 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 561 (973)
..++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|.+|++|+.|||+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 998 5888 99999999999996 99998888999999999999999999999889999999999999999
Q ss_pred CCcCccccChhhhcccccceeccCCcCcccCC
Q 039922 562 SNLLTGEIPLELTKLKLNQFNISHNKLYGEVP 593 (973)
Q Consensus 562 ~N~l~~~~p~~l~~l~l~~l~l~~N~l~g~~p 593 (973)
+|+|++..|..+..+.|+.|++++|++.+..+
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 99999655555655689999999999987543
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=1.3e-13 Score=153.44 Aligned_cols=109 Identities=23% Similarity=0.248 Sum_probs=50.4
Q ss_pred CCCCEEEccCCccccc----CCcCCCCCCCCCEEEccCCcCccc----CchhccCCCccceeeccccccCCCChhhhh--
Q 039922 242 AFLSNLDLSDNFLSGK----IPHSFSGLASIEQIELFDNQLSGE----LPESLSNLTTLLRLDISQNNLTGNLPETIA-- 311 (973)
Q Consensus 242 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-- 311 (973)
++|++|+|++|.|+.. ++..+...++|++|+|++|++++. ++..+...++|+.|+|++|.++......+.
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 4455555555555431 222334455555666666655532 234445555666666666666532222221
Q ss_pred ---cccCcEEEccCCcCCCCCCccccCCC-----ccceee--ecccccc
Q 039922 312 ---AMSLESLNLNDNYFTGEIPESLASNP-----NLVQLK--LFNNSFS 350 (973)
Q Consensus 312 ---~~~L~~L~L~~N~l~~~~p~~~~~l~-----~L~~L~--L~~N~l~ 350 (973)
..+|++|+|++|.|++.....+..+. .|+.+. +..|.++
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 13566666666666543333332221 155555 5555554
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.24 E-value=2.6e-10 Score=128.64 Aligned_cols=136 Identities=14% Similarity=0.135 Sum_probs=88.9
Q ss_pred ccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhhhcCCcCcEEeCcCCcccCCCcccccc
Q 039922 424 ELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQICTLRQLQAVDLSQNRFSGHLPTCITQ 503 (973)
Q Consensus 424 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 503 (973)
.....|.+...|+.+.+.++.. ......|.++++|+.+.+. +.++......|.++.+|+.+++..+ ++.+...+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 3344455555555555543322 2335566777777777775 4455455668889999999999875 66456778999
Q ss_pred ccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCc
Q 039922 504 LNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLT 566 (973)
Q Consensus 504 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 566 (973)
+++|+.+.|..+ ++.....+|.++++|+.+++++|.... ..|.....|+.+.+..|.+.
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 999999999755 665667889999999999999987652 45677788999888877653
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.09 E-value=1.8e-10 Score=122.01 Aligned_cols=143 Identities=15% Similarity=0.073 Sum_probs=109.9
Q ss_pred cCCCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEecCCeeEEEE
Q 039922 681 LPHLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSGQDFNILVY 759 (973)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 759 (973)
.+.|+.....+.|+.+.||++... ++.+++|+...... .....+.+|++.++.+. +..+.++++++...+..|+||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 456777778888888999999765 78999999853211 11234788999998885 667788999998888999999
Q ss_pred eccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 039922 760 EYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC------------------------------------ 803 (973)
Q Consensus 760 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------ 803 (973)
||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 90 e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 90 SEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp ECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999998876321 1123468889999999999810
Q ss_pred --------------------CCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 804 --------------------VPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 804 --------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.+.++|||++|.||+++++..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1368999999999999876666799998764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=1.1e-08 Score=114.51 Aligned_cols=302 Identities=12% Similarity=0.055 Sum_probs=143.3
Q ss_pred ccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhcccCcE
Q 039922 238 IGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMSLES 317 (973)
Q Consensus 238 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~ 317 (973)
+....+|+.+.+.. .++.+...+|.++.+|+.+.+.++ ++.+-..+|.++ +|+.+.+..+ ++......|...+|+.
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~~L~~ 117 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGTDLDD 117 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTCCCSE
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccCCccc
Confidence 33344555555543 344444556666666666666543 443444455554 4555555432 3323333444445666
Q ss_pred EEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhcccCcc
Q 039922 318 LNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFNNRF 397 (973)
Q Consensus 318 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 397 (973)
+.+.++- +......|.+ .+|+.+.+..+ ++......+..+.+++.+.+..+............ +..
T Consensus 118 i~lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~ 183 (379)
T 4h09_A 118 FEFPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLY-----------NKN 183 (379)
T ss_dssp EECCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEE-----------ETT
T ss_pred ccCCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceec-----------ccc
Confidence 6665442 2122233333 24555544433 23234445566666666665544332111000000 000
Q ss_pred CCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCchhh
Q 039922 398 SGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPSQI 477 (973)
Q Consensus 398 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 477 (973)
......+.....+..+.+..+. .......|....+|+.+.+..+ +.......+.++..|+.+.+..+ ++......|
T Consensus 184 -~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF 259 (379)
T 4h09_A 184 -KTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLL 259 (379)
T ss_dssp -SSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTT
T ss_pred -cceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcccc
Confidence 0111222233333333333222 1233344444455555554333 22233444555555555555443 333444455
Q ss_pred hcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccccccE
Q 039922 478 CTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTS 557 (973)
Q Consensus 478 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 557 (973)
.++.+|+.+.+..+ ++.....+|.++++|+.+.+.++.++.....+|.++.+|+.++|..+ ++..-..+|.++++|+.
T Consensus 260 ~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 337 (379)
T 4h09_A 260 QNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALST 337 (379)
T ss_dssp TTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCC
T ss_pred ceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCE
Confidence 55666666666543 33234455666666666666666666455566666666666666543 44333456666666666
Q ss_pred EecCCC
Q 039922 558 LDLSSN 563 (973)
Q Consensus 558 L~Ls~N 563 (973)
+.+..+
T Consensus 338 i~ip~~ 343 (379)
T 4h09_A 338 ISYPKS 343 (379)
T ss_dssp CCCCTT
T ss_pred EEECCc
Confidence 666543
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.00 E-value=1.4e-11 Score=128.46 Aligned_cols=175 Identities=18% Similarity=0.158 Sum_probs=117.0
Q ss_pred hhHHHHHHHhhhccCCCCCc--------cCCccCC---CCCCCCccceeEEcCCCCceeEeecCC---CccCCCCCC-Cc
Q 039922 28 GDAEILIRVKSDQLDDPNRK--------LGDWVRT---SQQSPCNWTGITCETQNQSVDGIDLSG---FDLSGGFPN-GF 92 (973)
Q Consensus 28 ~~~~~l~~~k~~~~~d~~~~--------~~sw~~~---~~~~~C~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~~ 92 (973)
.|++-|+++-......|-.. .+.|.-. .....|+|.|+.|+..+.+|..+...+ ..+.|.+++ .+
T Consensus 35 y~k~~ll~~i~~~~~~~f~p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~ 114 (267)
T 3rw6_A 35 YDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQV 114 (267)
T ss_dssp SCHHHHHHHHHHTCSSCCCCEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHH
T ss_pred cCHHHHHHHHHHhCCCCcEeEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHH
Confidence 46777777666555444221 1222100 112258999999998777786665555 345555543 34
Q ss_pred cCccccceeccCCCcccCcCCcCcCCCcCCccE--Eeccccc---ccccCCccccCCCCCCEEECcCCcCCC--CCCccc
Q 039922 93 CRIRTLRNLNLSDNYFNGTLSSQSLSPCFHLQV--LALDYNV---FIGELPDFSREFANLQVLDLSRNNFSG--DIPESF 165 (973)
Q Consensus 93 ~~l~~L~~L~Ls~n~l~~~~~~~~l~~l~~L~~--L~L~~n~---~~~~~~~~~~~l~~L~~L~Ls~n~l~~--~~p~~~ 165 (973)
..++. .|....|.-++.+....|...+.|+. ++++.|+ +.+.++.....+++|+.|+|++|+|++ .+|..+
T Consensus 115 ~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~ 192 (267)
T 3rw6_A 115 EQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIV 192 (267)
T ss_dssp HHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHH
T ss_pred HHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHH
Confidence 44443 45556666666666566777777877 7788884 333334444678999999999999997 456777
Q ss_pred CCCCcccEEecCCcccCCcccccccccc--cccEeeccCcCCC
Q 039922 166 GRFPVLKVLNLGGNLLSGLIPSFLGNLT--ELTHFELGYNPLK 206 (973)
Q Consensus 166 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~Ls~n~l~ 206 (973)
+.+++|++|+|++|+|++. ..+..+. +|++|+|++|.+.
T Consensus 193 ~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 193 QKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred hhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 8899999999999999976 3455555 8999999999875
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=4e-10 Score=119.28 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=98.8
Q ss_pred CCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCC--eeeEEeEEecCCeeEEEEe
Q 039922 683 HLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGN--VVKLLMCCSGQDFNILVYE 760 (973)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 760 (973)
.+....+.+.|..+.||++...+|+.+++|..... ....+.+|+..++.+.+.+ +.+++++...++..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 34443333455669999998777889999987432 1234678888888886544 4568888887788899999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC------------------------------------- 803 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------- 803 (973)
|++|.++. ... .+ ...++.++++.++.||+..
T Consensus 96 ~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 96 EVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp CCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred ecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 99988884 211 11 2256777888888888742
Q ss_pred ------------------CCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 804 ------------------VPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 804 ------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
.+.++|||++|.||+++++..+.|+|||.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999764
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.90 E-value=3.6e-08 Score=110.38 Aligned_cols=295 Identities=10% Similarity=0.027 Sum_probs=178.5
Q ss_pred CccccCCCCCCEEEccCCcccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccccccCCCChhhhhccc
Q 039922 235 PDSIGKLAFLSNLDLSDNFLSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQNNLTGNLPETIAAMS 314 (973)
Q Consensus 235 p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 314 (973)
..+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++.+...+|.. .+|+.+++..+ ++......+...+
T Consensus 62 ~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~~ 136 (379)
T 4h09_A 62 EANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNSS 136 (379)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccce
Confidence 457888889999998754 665667788876 6888877654 44344455655 47888888765 3323344555556
Q ss_pred CcEEEccCCcCCCCCCccccCCCccceeeeccccccCCCCCCccCCCCccceeeecccccccCCccccccCCchhhhccc
Q 039922 315 LESLNLNDNYFTGEIPESLASNPNLVQLKLFNNSFSGKLPDDLGKYSNLEYFDVSTNDFTGELPRFLCFRNKLQCIIIFN 394 (973)
Q Consensus 315 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 394 (973)
++.+.+..+ ++......|....+++.+.+..+........ .......... ...+.....+..+.+..
T Consensus 137 l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 203 (379)
T 4h09_A 137 VKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAEN-YVLYNKNKTI-----------LESYPAAKTGTEFTIPS 203 (379)
T ss_dssp CCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEET-TEEEETTSSE-----------EEECCTTCCCSEEECCT
T ss_pred eeeeeccce-eeccccchhcccccccccccccccceeeccc-ceecccccce-----------ecccccccccccccccc
Confidence 777776654 4435556777888888887776554311111 1000000000 01111111222222211
Q ss_pred CccCCCCCCccCCcceeeEEEccCCccccccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCc
Q 039922 395 NRFSGKIPESYGECKTLNYLRFGGNELQGELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVP 474 (973)
Q Consensus 395 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p 474 (973)
. ........+..+.+|+.+.+..+ +.......|.+...|+.+.+..+ ++......|.++.+|+.+.+..+ +.....
T Consensus 204 ~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~ 279 (379)
T 4h09_A 204 T-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPY 279 (379)
T ss_dssp T-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECT
T ss_pred c-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccc
Confidence 1 11133445566667777777544 44455666777777777777655 55455667777777887777543 443445
Q ss_pred hhhhcCCcCcEEeCcCCcccCCCccccccccccceeeccccccccccCcccCccccceeeeeccCcccCCCCccccccc
Q 039922 475 SQICTLRQLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLA 553 (973)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 553 (973)
..|..+.+|+.+.+.++.++.....+|.++.+|+.+.|..+ ++.....+|.++++|+.+.+..+ ++..-..+|.+.+
T Consensus 280 ~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 280 LLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 56777888888888887777555677888888888888654 66455677888888888888654 5533455666553
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=5.7e-10 Score=122.88 Aligned_cols=180 Identities=16% Similarity=0.213 Sum_probs=115.8
Q ss_pred cCCcceeeEEEccCCccc---------cccCcccCCCCCccEEEeecCcccCCCCCCCCCCCCcceEeecCCcCCCCCch
Q 039922 405 YGECKTLNYLRFGGNELQ---------GELPSKFWGLPEVDFFEMYNNRFEGSISPSISNAPKLTGILINGNNFTGEVPS 475 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 475 (973)
...+++|+.|.+..+... +.+...+..+|+|+.|++++|.-. ..+. + .+++|+.|.+..+.+......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHH
Confidence 334556666666544221 123344566788888888877311 1222 3 378899999998887755444
Q ss_pred hhh--cCCcCcEEeCcC--CcccCC-----Ccccc--ccccccceeeccccccccccCcccC---ccccceeeeeccCcc
Q 039922 476 QIC--TLRQLQAVDLSQ--NRFSGH-----LPTCI--TQLNKLQQLELQENMFTGELPRNLN---SLTALIVLNLSTNQL 541 (973)
Q Consensus 476 ~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l 541 (973)
.++ .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+++..+..+. .+++|+.|+|+.|.|
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 555 688999999864 222111 11223 2478999999999998865544443 578999999999999
Q ss_pred cCC----CCccccccccccEEecCCCcCccccChhhhcccccceeccCCc
Q 039922 542 TGT----IPPELGNLAVLTSLDLSSNLLTGEIPLELTKLKLNQFNISHNK 587 (973)
Q Consensus 542 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~l~~l~l~~N~ 587 (973)
++. ++..+..+++|+.|+|++|.++...-..+...-...+++++|.
T Consensus 292 ~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp BHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred ChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 853 4445567899999999999988544333433112457787775
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=6.9e-09 Score=115.30 Aligned_cols=143 Identities=17% Similarity=0.216 Sum_probs=105.3
Q ss_pred ccccccccCCeeEEEEEECCCCEEEEEEec--CCCCCchhHHHHHHHHHHHhcCCC--CCeeeEEeEEecC---CeeEEE
Q 039922 686 EQNLIGSGGSCRVYKVKLKSGETVAVKRLL--GGTHKPETETVFRSEIETLGRVRH--GNVVKLLMCCSGQ---DFNILV 758 (973)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lv 758 (973)
..+.++.|.++.||++... +..+++|+.. ... .......+.+|+.+++.+.. ..+.+++.++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 3567899999999999876 4688888764 221 11223467889999998873 4578888888766 458999
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDC----------------------------------- 803 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------- 803 (973)
|||+++..+.+.. ...++...+..++.+++++|+.||+..
T Consensus 120 me~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999987775421 113677888899999999999999731
Q ss_pred --------------------CCCeEEeCCCCCCEEeCCCCc--eEEeccCcchh
Q 039922 804 --------------------VPAIVHRDVKSHNILLDAEMV--PRVADFGLAKA 835 (973)
Q Consensus 804 --------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfGl~~~ 835 (973)
.+.++|||+++.||++++++. +.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998764
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.82 E-value=1e-09 Score=120.82 Aligned_cols=136 Identities=15% Similarity=0.242 Sum_probs=69.0
Q ss_pred cceeeEEEccCCccccccCcccC--CCCCccEEEeec--CcccCCCCCCCCCCCCcceEeecCCcCCCCCchhh--hcCC
Q 039922 408 CKTLNYLRFGGNELQGELPSKFW--GLPEVDFFEMYN--NRFEGSISPSISNAPKLTGILINGNNFTGEVPSQI--CTLR 481 (973)
Q Consensus 408 l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~--~~l~ 481 (973)
+++|++|+|..+.+.......+. .+|+|+.|+|+. |...+.. .+ . .+...+ ..++
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~----------------~-~l~~~l~~~~~p 252 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DM----------------N-VFRPLFSKDRFP 252 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CG----------------G-GTGGGSCTTTCT
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hH----------------H-HHHHHHhcCCCC
Confidence 56777777777776544433333 567777777653 1111100 00 0 000001 1245
Q ss_pred cCcEEeCcCCcccCCCccccc---cccccceeeccccccccc----cCcccCccccceeeeeccCcccCCCCccccc-cc
Q 039922 482 QLQAVDLSQNRFSGHLPTCIT---QLNKLQQLELQENMFTGE----LPRNLNSLTALIVLNLSTNQLTGTIPPELGN-LA 553 (973)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~ 553 (973)
+|++|+|++|.+.+..+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. +
T Consensus 253 ~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al- 331 (362)
T 2ra8_A 253 NLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL- 331 (362)
T ss_dssp TCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-
T ss_pred CcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc-
Confidence 666666666655432222222 356677777777766653 3333445677777777777765322222221 1
Q ss_pred cccEEecCCCc
Q 039922 554 VLTSLDLSSNL 564 (973)
Q Consensus 554 ~L~~L~Ls~N~ 564 (973)
...+++++|+
T Consensus 332 -g~~~~~~~~~ 341 (362)
T 2ra8_A 332 -PMKIDVSDSQ 341 (362)
T ss_dssp -CSEEECCSBC
T ss_pred -CCEEEecCCc
Confidence 2557777776
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.69 E-value=2e-08 Score=108.67 Aligned_cols=189 Identities=19% Similarity=0.252 Sum_probs=120.3
Q ss_pred cccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCC--eeeEEeEEecCC---eeEEEEe
Q 039922 687 QNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGN--VVKLLMCCSGQD---FNILVYE 760 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 760 (973)
.+.++.|.+..||++. +.+++|+.. .......+.+|.+.++.+. +.. +.+++......+ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~----~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPK----HSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEES----SHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecC----CcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 568898762 2244567889999998873 332 334444433333 3588999
Q ss_pred ccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhc--------------------------------------
Q 039922 761 YMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHND-------------------------------------- 802 (973)
Q Consensus 761 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------- 802 (973)
+++|.++.+.... .++..++..++.+++..++.||+.
T Consensus 97 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 97 KIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred ccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9998887653321 356777788888888888888861
Q ss_pred -----------------CCCCeEEeCCCCCCEEeCC--CCceEEeccCcchhccccCCC----------ccccccccccc
Q 039922 803 -----------------CVPAIVHRDVKSHNILLDA--EMVPRVADFGLAKALQSQEGQ----------SDDAMSCVAGS 853 (973)
Q Consensus 803 -----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGl~~~~~~~~~~----------~~~~~~~~~gt 853 (973)
..+.++|||++|.||++++ +..+.++||+.+..-+..... ...........
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1146899999999999998 456789999987643211000 00000000000
Q ss_pred cCccc-cccccCCCCCCCCChhhHHHHHHHHHcCCCCC
Q 039922 854 YGYIA-PEYAYTKKVTEKSDVYSFGVVLMELVTGKRPN 890 (973)
Q Consensus 854 ~~y~a-PE~~~~~~~~~~~Dv~slG~~l~elltg~~p~ 890 (973)
.++.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 252 Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 11112 2221111 12358999999999999998665
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=2.3e-08 Score=104.16 Aligned_cols=65 Identities=28% Similarity=0.361 Sum_probs=31.6
Q ss_pred ccccceeecccccccc--ccCcccCccccceeeeeccCcccCCCCccccccc--cccEEecCCCcCccccC
Q 039922 504 LNKLQQLELQENMFTG--ELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLA--VLTSLDLSSNLLTGEIP 570 (973)
Q Consensus 504 l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 570 (973)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444443 2334444455555555555555532 2233333 56666666666665554
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=8.7e-07 Score=96.41 Aligned_cols=136 Identities=18% Similarity=0.235 Sum_probs=98.9
Q ss_pred CCCccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCC---C-CeeeEEeEEecCCeeEEE
Q 039922 683 HLTEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRH---G-NVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~lv 758 (973)
.+...+.++.|....||++ |+.+++|+.. .......+.+|.+.++.+.+ + .+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~----~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPK----RDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCC----cHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 3455678999999999998 6778888762 22334568899998888865 2 23344444 567899
Q ss_pred EeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----------------------------------
Q 039922 759 YEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCV---------------------------------- 804 (973)
Q Consensus 759 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~---------------------------------- 804 (973)
|||++|.++.+.... .++..++..++.+++..++.||+...
T Consensus 106 me~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 106 MKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp EECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 999999888643211 24566677778888888888885321
Q ss_pred --------------------------CCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 805 --------------------------PAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 805 --------------------------~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999876679999998754
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.39 E-value=3.6e-08 Score=97.84 Aligned_cols=113 Identities=21% Similarity=0.268 Sum_probs=61.3
Q ss_pred CCCCCcceEeecCC-cCCCC----CchhhhcCCcCcEEeCcCCcccCC----Cccccccccccceeeccccccccc----
Q 039922 454 SNAPKLTGILINGN-NFTGE----VPSQICTLRQLQAVDLSQNRFSGH----LPTCITQLNKLQQLELQENMFTGE---- 520 (973)
Q Consensus 454 ~~~~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 520 (973)
...++|++|+|++| .+... +...+...++|++|+|++|+|... +...+...++|++|+|++|+|+..
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 33445555555555 54422 223344456666666666666531 223344445666666666666643
Q ss_pred cCcccCccccceeeee--ccCcccCC----CCccccccccccEEecCCCcCc
Q 039922 521 LPRNLNSLTALIVLNL--STNQLTGT----IPPELGNLAVLTSLDLSSNLLT 566 (973)
Q Consensus 521 ~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 566 (973)
+...+...++|++|+| ++|.|+.. +...+...+.|++|+|++|.+.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445555666667777 56666532 2233444466777777777664
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=1e-08 Score=101.83 Aligned_cols=118 Identities=16% Similarity=0.141 Sum_probs=87.0
Q ss_pred CCCccCccccceeccCCC-cccCc---CCcCcCCCcCCccEEeccccccccc----CCccccCCCCCCEEECcCCcCCCC
Q 039922 89 PNGFCRIRTLRNLNLSDN-YFNGT---LSSQSLSPCFHLQVLALDYNVFIGE----LPDFSREFANLQVLDLSRNNFSGD 160 (973)
Q Consensus 89 ~~~~~~l~~L~~L~Ls~n-~l~~~---~~~~~l~~l~~L~~L~L~~n~~~~~----~~~~~~~l~~L~~L~Ls~n~l~~~ 160 (973)
...+...+.|++|+|++| .+... .-...+...++|++|+|++|.|... +...+...++|++|+|++|.|...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344567788999999998 77632 1123456678899999999988642 445566678899999999999853
Q ss_pred ----CCcccCCCCcccEEec--CCcccCCc----ccccccccccccEeeccCcCCC
Q 039922 161 ----IPESFGRFPVLKVLNL--GGNLLSGL----IPSFLGNLTELTHFELGYNPLK 206 (973)
Q Consensus 161 ----~p~~~~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~ 206 (973)
+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3556777888999999 88998854 2345556688999999999874
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25 E-value=4.5e-06 Score=88.35 Aligned_cols=134 Identities=17% Similarity=0.117 Sum_probs=96.5
Q ss_pred cccccCCe-eEEEEEEC-CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEecCCeeEEEEeccCCC
Q 039922 689 LIGSGGSC-RVYKVKLK-SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSGQDFNILVYEYMPNG 765 (973)
Q Consensus 689 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 765 (973)
.+..|..| .||+.... +++.+++|+-. ......+.+|...++.+. +--+.+++.++...+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~-----~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGK-----GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEE-----THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECC-----CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 34456665 68988765 46789999762 234556788999888875 323667888888889999999999988
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 039922 766 SLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHND------------------------------------------- 802 (973)
Q Consensus 766 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------------- 802 (973)
++.+..... ......+..+++..++.||+.
T Consensus 106 ~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 106 TAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp EHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 877654321 122335666777777777753
Q ss_pred ------------CCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 803 ------------CVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 803 ------------~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
..+.++|||+.+.||++++++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01248999999999999987777799998764
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.21 E-value=3.8e-06 Score=89.45 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=59.5
Q ss_pred ccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCC---CeeeEEeEEecCCeeEEEEecc
Q 039922 686 EQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHG---NVVKLLMCCSGQDFNILVYEYM 762 (973)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 762 (973)
..+.|+.|.++.||++...+|+.++||+.... .......+.+|++.++.+++. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~--~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDD--APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTT--CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCC--CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 35679999999999999989999999986322 122335688999999999865 577777763 368999999
Q ss_pred CCCCh
Q 039922 763 PNGSL 767 (973)
Q Consensus 763 ~~gsL 767 (973)
+++++
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 98764
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.15 E-value=1.1e-05 Score=86.81 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=93.4
Q ss_pred cccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCC---CeeeEEeEEe-cCCeeEEEEecc
Q 039922 687 QNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHG---NVVKLLMCCS-GQDFNILVYEYM 762 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 762 (973)
.+.++.|....||++ |+.+++|+-. .......+.+|.+.++.+.+. .+.+++.+.. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456788888999998 6778888751 233456788999999999753 2456666664 455678999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhc----------------------------------------
Q 039922 763 PNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHND---------------------------------------- 802 (973)
Q Consensus 763 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~---------------------------------------- 802 (973)
+|..+.+.... .++...+..++.++++.++.||+.
T Consensus 96 ~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 96 QGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp CSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 98877653211 133444455555555555555542
Q ss_pred -----------------CCCCeEEeCCCCCCEEeCC---CCc-eEEeccCcchh
Q 039922 803 -----------------CVPAIVHRDVKSHNILLDA---EMV-PRVADFGLAKA 835 (973)
Q Consensus 803 -----------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DfGl~~~ 835 (973)
..+.++|+|++|.||++++ ++. +.|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 455 47999997653
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.97 E-value=2e-05 Score=87.02 Aligned_cols=75 Identities=8% Similarity=0.085 Sum_probs=54.9
Q ss_pred ccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCC--eeeEEeEEecC-CeeEEEEecc
Q 039922 686 EQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGN--VVKLLMCCSGQ-DFNILVYEYM 762 (973)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 762 (973)
..+.++.|....+|++.. +|+.+++|..... ..+.+|...++.+.... +.+++.++... +..|+||||+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 456788899999999876 4889999977321 24778888888886433 45667666654 6689999999
Q ss_pred CCCChh
Q 039922 763 PNGSLA 768 (973)
Q Consensus 763 ~~gsL~ 768 (973)
++.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 876553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.85 E-value=1.6e-05 Score=87.90 Aligned_cols=83 Identities=8% Similarity=0.054 Sum_probs=54.2
Q ss_pred cccc-cccCCeeEEEEEEC-------CCCEEEEEEecCCCC-CchhHHHHHHHHHHHhcCC-C--CCeeeEEeEEecC--
Q 039922 687 QNLI-GSGGSCRVYKVKLK-------SGETVAVKRLLGGTH-KPETETVFRSEIETLGRVR-H--GNVVKLLMCCSGQ-- 752 (973)
Q Consensus 687 ~~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 752 (973)
.+.| +.|....+|++... +++.+++|+...... .......+.+|+..++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 78888999998764 267888987632210 0001134677888888775 3 2466777777654
Q ss_pred -CeeEEEEeccCCCChhh
Q 039922 753 -DFNILVYEYMPNGSLAD 769 (973)
Q Consensus 753 -~~~~lv~e~~~~gsL~~ 769 (973)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999998876654
No 424
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.65 E-value=0.00018 Score=77.10 Aligned_cols=139 Identities=19% Similarity=0.194 Sum_probs=91.6
Q ss_pred ccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC---CCCeeeEEeEEecCCeeEEEEecc
Q 039922 686 EQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVR---HGNVVKLLMCCSGQDFNILVYEYM 762 (973)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 762 (973)
..+.|+.|.+..+|++.. +++.+++|+... .....+..|.+.++.+. ...+.+++.+....+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINER-----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEG-----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCc-----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 456789999999999986 477899998732 23566888988888884 256778888888888899999999
Q ss_pred CCCChhh-----------hhhccCC-C----------C--------CCCHHHHH---HHHH----------------HHH
Q 039922 763 PNGSLAD-----------MLHEKGR-S----------G--------SLDWSIRF---SIAQ----------------GAA 793 (973)
Q Consensus 763 ~~gsL~~-----------~l~~~~~-~----------~--------~l~~~~~~---~i~~----------------~ia 793 (973)
++..+.. .+|.... . + .-+|...+ ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9875421 1222211 0 0 12454321 1111 111
Q ss_pred HH-HHHHhh-cCCCCeEEeCCCCCCEEeCCCCceEEeccC
Q 039922 794 KG-LAYLHN-DCVPAIVHRDVKSHNILLDAEMVPRVADFG 831 (973)
Q Consensus 794 ~~-L~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 831 (973)
.. ...|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 123321 2246899999999999999887 8899974
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.65 E-value=5.7e-05 Score=82.85 Aligned_cols=141 Identities=20% Similarity=0.226 Sum_probs=78.4
Q ss_pred cccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCC--CCeeeEEe------EEecCCeeEEE
Q 039922 687 QNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRH--GNVVKLLM------CCSGQDFNILV 758 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv 758 (973)
.+.++.|..+.||++...+| .+++|+... . ...+..|..+++.+.. -.+.+++. +....+..+++
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHR---P---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECS---C---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCC---C---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 34566677899999987655 589998843 1 1223345555554431 12233332 12245678999
Q ss_pred EeccCCCChh--------------hhhhccCC----C-------CCCCHHHH----------------------------
Q 039922 759 YEYMPNGSLA--------------DMLHEKGR----S-------GSLDWSIR---------------------------- 785 (973)
Q Consensus 759 ~e~~~~gsL~--------------~~l~~~~~----~-------~~l~~~~~---------------------------- 785 (973)
|||++|..+. ..+|.... . ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999876442 01121100 0 01123211
Q ss_pred ---HHHHHHHHHHHHHHhh----------cCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 786 ---FSIAQGAAKGLAYLHN----------DCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 786 ---~~i~~~ia~~L~yLH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
..+...+..++++|++ ...+.++|||+++.||+++.++.+.++||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666663 123489999999999999888899999999754
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.61 E-value=0.00011 Score=82.40 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=48.5
Q ss_pred cccccccCCeeEEEEEEC-CCCEEEEEEecCCCC--C---chhHHHHHHHHHHHhcCCC--CC-eeeEEeEEecCCeeEE
Q 039922 687 QNLIGSGGSCRVYKVKLK-SGETVAVKRLLGGTH--K---PETETVFRSEIETLGRVRH--GN-VVKLLMCCSGQDFNIL 757 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 757 (973)
.+.+|.|.++.||+++.. +++.|++|....... . ......+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999764 478999998643211 0 1122346678888877642 33 3355543 3445689
Q ss_pred EEeccCCC
Q 039922 758 VYEYMPNG 765 (973)
Q Consensus 758 v~e~~~~g 765 (973)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.48 E-value=1.8e-05 Score=76.10 Aligned_cols=83 Identities=16% Similarity=0.133 Sum_probs=37.8
Q ss_pred cCcEEeCcCCcccCCCccccccccccceeeccccc-cccccCcccCcc----ccceeeeeccCc-ccCCCCccccccccc
Q 039922 482 QLQAVDLSQNRFSGHLPTCITQLNKLQQLELQENM-FTGELPRNLNSL----TALIVLNLSTNQ-LTGTIPPELGNLAVL 555 (973)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 555 (973)
+|+.||++++.|+..--..+.++++|+.|+|+++. |++.--..++.+ ++|++|+|+++. ||..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443333334444455555555542 443333333332 245555555542 543222334455666
Q ss_pred cEEecCCCc
Q 039922 556 TSLDLSSNL 564 (973)
Q Consensus 556 ~~L~Ls~N~ 564 (973)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666553
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.45 E-value=5.4e-05 Score=72.86 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=39.5
Q ss_pred CCCEEEccCCcCcccCchhccCCCccceeeccccc-cCCCChhhhhc-----ccCcEEEccCCc-CCCCCCccccCCCcc
Q 039922 267 SIEQIELFDNQLSGELPESLSNLTTLLRLDISQNN-LTGNLPETIAA-----MSLESLNLNDNY-FTGEIPESLASNPNL 339 (973)
Q Consensus 267 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~-----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 339 (973)
+|++|+++++.++..--..+..+++|+.|+|++|. ++..--..+.. .+|++|+|++|. +++.--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554433445555666666666653 43222222221 135555555542 443322334455556
Q ss_pred ceeeecccc
Q 039922 340 VQLKLFNNS 348 (973)
Q Consensus 340 ~~L~L~~N~ 348 (973)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666555553
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.42 E-value=0.00021 Score=76.19 Aligned_cols=76 Identities=24% Similarity=0.339 Sum_probs=53.5
Q ss_pred CccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCC--C-CeeeEEeEEecCCeeEEEEec
Q 039922 685 TEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRH--G-NVVKLLMCCSGQDFNILVYEY 761 (973)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~lv~e~ 761 (973)
..++.+|.|..+.||+++..||+.|++|+-.... ......|..|...|+.+.- + -+.+++++ +..++||||
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 3456789999999999999999999999864332 2223457888888887742 1 23445543 234789999
Q ss_pred cCCCC
Q 039922 762 MPNGS 766 (973)
Q Consensus 762 ~~~gs 766 (973)
++.+.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 97654
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.20 E-value=0.0013 Score=74.07 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=45.5
Q ss_pred CCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCcccccccccc--ccCccccccccCC---CCCCCCChhhHHHH
Q 039922 805 PAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAG--SYGYIAPEYAYTK---KVTEKSDVYSFGVV 879 (973)
Q Consensus 805 ~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~Dv~slG~~ 879 (973)
+.++|||++|.||++++++ ++++||+.+..-..... ...... ...|++|+..... ......++......
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-----la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-----IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ 305 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-----HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-----HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHH
Confidence 3899999999999998876 99999998764321100 000000 1345666654311 11122345577777
Q ss_pred HHHHHcC
Q 039922 880 LMELVTG 886 (973)
Q Consensus 880 l~elltg 886 (973)
+|+.+++
T Consensus 306 ~~~~y~~ 312 (420)
T 2pyw_A 306 TWNLFNK 312 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.08 E-value=0.0001 Score=72.26 Aligned_cols=110 Identities=17% Similarity=0.239 Sum_probs=53.3
Q ss_pred CCCcceEeecCC-cCCCC----CchhhhcCCcCcEEeCcCCcccC----CCccccccccccceeeccccccccc----cC
Q 039922 456 APKLTGILINGN-NFTGE----VPSQICTLRQLQAVDLSQNRFSG----HLPTCITQLNKLQQLELQENMFTGE----LP 522 (973)
Q Consensus 456 ~~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 522 (973)
.+.|++|+|++| +|... +...+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|+|++. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 344555555553 44321 22334445566666666666653 2223333445666666666666543 22
Q ss_pred cccCccccceeeeeccC---cccC----CCCccccccccccEEecCCCcC
Q 039922 523 RNLNSLTALIVLNLSTN---QLTG----TIPPELGNLAVLTSLDLSSNLL 565 (973)
Q Consensus 523 ~~~~~l~~L~~L~Ls~N---~l~~----~~p~~~~~l~~L~~L~Ls~N~l 565 (973)
+.+..-+.|+.|+|++| .+.. .+-..+..-+.|+.|+|+.|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 33444455666666543 2221 1222333445566666655543
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.91 E-value=0.0018 Score=70.45 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=70.8
Q ss_pred ccccccCCee-EEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCC--CeeeEEeEEecCCeeEEEEeccCC
Q 039922 688 NLIGSGGSCR-VYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHG--NVVKLLMCCSGQDFNILVYEYMPN 764 (973)
Q Consensus 688 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~ 764 (973)
+.++.|.... +|+....+|+.+++|....... ..+..|+.+++.+... .+.+++.+....+ +++||++++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4565565544 6677654477888876532210 1234456666555322 2445666543333 689999977
Q ss_pred CChhhhhhcc---------------------CCC--CCCCHHHHH-------H-------------HHHHHHHHHHHHhh
Q 039922 765 GSLADMLHEK---------------------GRS--GSLDWSIRF-------S-------------IAQGAAKGLAYLHN 801 (973)
Q Consensus 765 gsL~~~l~~~---------------------~~~--~~l~~~~~~-------~-------------i~~~ia~~L~yLH~ 801 (973)
..+.+++... ... ...+..... . ....+...++.+.+
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 6665443211 000 011111000 0 00111122222211
Q ss_pred ---cCCCCeEEeCCCCCCEEeCCC----CceEEeccCcchh
Q 039922 802 ---DCVPAIVHRDVKSHNILLDAE----MVPRVADFGLAKA 835 (973)
Q Consensus 802 ---~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGl~~~ 835 (973)
...+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123479999999999999875 6789999998754
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.77 E-value=0.0038 Score=67.64 Aligned_cols=141 Identities=15% Similarity=0.128 Sum_probs=79.7
Q ss_pred ccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCC--eeeEEeE-----EecCCeeEEEEe
Q 039922 688 NLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGN--VVKLLMC-----CSGQDFNILVYE 760 (973)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e 760 (973)
..++ |....||++...+|+.+++|...... .....+..|...++.+.... +.+++.. ...++..+.+||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~---~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC---CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 3466 88889999887778889999984322 12345666777777764222 3344432 122456688999
Q ss_pred ccCCCChhh-----------h---hhcc----CC--CCCCCHHHH----HHH---------------HHHHHHHHHHHhh
Q 039922 761 YMPNGSLAD-----------M---LHEK----GR--SGSLDWSIR----FSI---------------AQGAAKGLAYLHN 801 (973)
Q Consensus 761 ~~~~gsL~~-----------~---l~~~----~~--~~~l~~~~~----~~i---------------~~~ia~~L~yLH~ 801 (973)
|++|..+.. . +|.. .. ....++... ..+ ...+...++.+.+
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 998754321 0 1111 00 011222111 001 1111122233322
Q ss_pred c----CCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 802 D----CVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 802 ~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
. ....++|||+++.||+++ + .+.++||+.+.
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1 233688999999999999 4 89999998764
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.77 E-value=0.00026 Score=69.41 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=37.6
Q ss_pred ccCCCCCCEEEccCC-ccccc----CCcCCCCCCCCCEEEccCCcCccc----CchhccCCCccceeeccccccC
Q 039922 238 IGKLAFLSNLDLSDN-FLSGK----IPHSFSGLASIEQIELFDNQLSGE----LPESLSNLTTLLRLDISQNNLT 303 (973)
Q Consensus 238 l~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 303 (973)
+.+-+.|+.|+|++| .|... +...+..-+.|+.|+|++|++... +.+.+..-+.|+.|+|++|.|.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345567788888775 66532 233344455667777777766632 2233444456666666666665
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.77 E-value=0.0014 Score=70.13 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=44.0
Q ss_pred CccccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCe-eeEEeEEecCCeeEEEEecc-
Q 039922 685 TEQNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNV-VKLLMCCSGQDFNILVYEYM- 762 (973)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~- 762 (973)
.-.+.|+.|....+|++ +.+++|+........ ....+|+..++.+....+ .++++++ .+.-++|+||+
T Consensus 21 ~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 21 TGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CSCEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred cceeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 33678888999999998 568888874321111 112457777766643233 3555443 33457899999
Q ss_pred CCCCh
Q 039922 763 PNGSL 767 (973)
Q Consensus 763 ~~gsL 767 (973)
++.++
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 55444
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.71 E-value=0.0031 Score=69.36 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=81.2
Q ss_pred cccccccCCeeEEEEEEC--------CCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEecCCeeEE
Q 039922 687 QNLIGSGGSCRVYKVKLK--------SGETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSGQDFNIL 757 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 757 (973)
.+.+..|-...+|++... +++.|++|+... . ......+.+|..+++.+. +.-..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--I-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--c-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 345666888899999875 357899998621 1 122345568888888875 3333566666543 28
Q ss_pred EEeccCCCChhhh-----------------hhccCC--CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 039922 758 VYEYMPNGSLADM-----------------LHEKGR--SGSLD--WSIRFSIAQGAAK-------------------GLA 797 (973)
Q Consensus 758 v~e~~~~gsL~~~-----------------l~~~~~--~~~l~--~~~~~~i~~~ia~-------------------~L~ 797 (973)
||||++|.++..- +|.... ..... +.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999987554310 111111 11122 3444445443322 223
Q ss_pred HHhh----c-CCCCeEEeCCCCCCEEeCCC----CceEEeccCcch
Q 039922 798 YLHN----D-CVPAIVHRDVKSHNILLDAE----MVPRVADFGLAK 834 (973)
Q Consensus 798 yLH~----~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGl~~ 834 (973)
.|.+ . ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3322 1 12368999999999999876 789999998764
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.69 E-value=0.0028 Score=71.38 Aligned_cols=73 Identities=23% Similarity=0.266 Sum_probs=48.4
Q ss_pred cccccccCCeeEEEEEECC--------CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCe-eeEEeEEecCCeeEE
Q 039922 687 QNLIGSGGSCRVYKVKLKS--------GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNV-VKLLMCCSGQDFNIL 757 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~l 757 (973)
.+.|+.|-...||++...+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 3567788889999998753 578999988321 111344578888888753333 566665542 28
Q ss_pred EEeccCCCCh
Q 039922 758 VYEYMPNGSL 767 (973)
Q Consensus 758 v~e~~~~gsL 767 (973)
||||+++.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999976443
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.68 E-value=0.0018 Score=59.32 Aligned_cols=57 Identities=25% Similarity=0.263 Sum_probs=35.3
Q ss_pred eeeccccccc-cccCcccCccccceeeeeccCcccCCCCccccccccccEEecCCCcCcc
Q 039922 509 QLELQENMFT-GELPRNLNSLTALIVLNLSTNQLTGTIPPELGNLAVLTSLDLSSNLLTG 567 (973)
Q Consensus 509 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 567 (973)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|++..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4444455443 23333222 346677777777775555667778888888888887763
No 439
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.59 E-value=0.0023 Score=69.10 Aligned_cols=143 Identities=10% Similarity=0.119 Sum_probs=78.3
Q ss_pred cccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCC--eeeEEeE------EecCCeeEEE
Q 039922 687 QNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGN--VVKLLMC------CSGQDFNILV 758 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv 758 (973)
.+.|+.|....+|++...+| .+++|...... ....+..|..+++.+.... +.+++.. ....+..+++
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 35677788899999987755 68899884321 1223456777766664222 2233321 1224567899
Q ss_pred EeccCCCChhh--------------hhhccCC----CC--C---CCHHHHHH------------HHHHHHHHHHHHhhc-
Q 039922 759 YEYMPNGSLAD--------------MLHEKGR----SG--S---LDWSIRFS------------IAQGAAKGLAYLHND- 802 (973)
Q Consensus 759 ~e~~~~gsL~~--------------~l~~~~~----~~--~---l~~~~~~~------------i~~~ia~~L~yLH~~- 802 (973)
|+|++|..+.. .+|.... .. . ..|...+. +...+...++++++.
T Consensus 102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~ 181 (322)
T 2ppq_A 102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW 181 (322)
T ss_dssp EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence 99998754321 0121110 00 0 11222110 011234455555532
Q ss_pred ---CCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 803 ---CVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 803 ---~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
...+++|+|+.+.||+++++..+.++||+.+.
T Consensus 182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23479999999999999887666899998764
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.42 E-value=0.003 Score=57.75 Aligned_cols=56 Identities=29% Similarity=0.348 Sum_probs=35.7
Q ss_pred EEeCcCCccc-CCCccccccccccceeeccccccccccCcccCccccceeeeeccCccc
Q 039922 485 AVDLSQNRFS-GHLPTCITQLNKLQQLELQENMFTGELPRNLNSLTALIVLNLSTNQLT 542 (973)
Q Consensus 485 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 542 (973)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 23454433 35677777777777555566677777777777777664
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.30 E-value=0.014 Score=65.82 Aligned_cols=74 Identities=18% Similarity=0.082 Sum_probs=46.3
Q ss_pred cccccccCCeeEEEEEECC-CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCe-eeEEeEEecCCeeEEEEeccCC
Q 039922 687 QNLIGSGGSCRVYKVKLKS-GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNV-VKLLMCCSGQDFNILVYEYMPN 764 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 764 (973)
.+.|+.|-...+|++...+ ++.+++|+......... ...+|..+++.+...++ .++++++. + ..||||+++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i---dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII---NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS---CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc---CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4567788889999998874 47888988733211111 12468888888864444 46666663 2 259999986
Q ss_pred CCh
Q 039922 765 GSL 767 (973)
Q Consensus 765 gsL 767 (973)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.29 E-value=0.0046 Score=68.22 Aligned_cols=74 Identities=19% Similarity=0.117 Sum_probs=42.8
Q ss_pred cccccccCCeeEEEEEECC---------CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCC-eeeEEeEEecCCeeE
Q 039922 687 QNLIGSGGSCRVYKVKLKS---------GETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGN-VVKLLMCCSGQDFNI 756 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~ 756 (973)
.+.++.|....+|++...+ ++.+++|+..... ........|...++.+...+ ..++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3457778888999998764 2688888773221 11112356777777775333 34666544 2 36
Q ss_pred EEEeccCCCCh
Q 039922 757 LVYEYMPNGSL 767 (973)
Q Consensus 757 lv~e~~~~gsL 767 (973)
+||||+++..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.81 E-value=0.034 Score=60.31 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=27.4
Q ss_pred CCeEEeCCCCCCEEeCCCCceEEeccCcchh
Q 039922 805 PAIVHRDVKSHNILLDAEMVPRVADFGLAKA 835 (973)
Q Consensus 805 ~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~ 835 (973)
..++|+|+.+.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987654
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.87 E-value=0.056 Score=53.14 Aligned_cols=105 Identities=14% Similarity=0.160 Sum_probs=67.9
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcchhccccCCCccc
Q 039922 766 SLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAKALQSQEGQSDD 845 (973)
Q Consensus 766 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~~~~~~~~~~~~ 845 (973)
+|.+.|...+. ++++.++|.++.|.+.+|.-.-.+.. . ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 78899887654 79999999999999999877622100 1 1222356889999999988764 1110
Q ss_pred cccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCCC
Q 039922 846 AMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPNDP 892 (973)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~ 892 (973)
.....+.|||... ...+.+.=|||+|+++|.-+--+.|-+.
T Consensus 98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e 138 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE 138 (229)
T ss_dssp --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE
T ss_pred -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc
Confidence 0112356888753 3456677899999999999987766543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.86 E-value=0.045 Score=60.29 Aligned_cols=143 Identities=15% Similarity=0.137 Sum_probs=79.6
Q ss_pred ccccccCCeeEEEEEECC--------CCEEEEEEecCCCCC----------chhH------HHHHHHHHHHhcCC-CCCe
Q 039922 688 NLIGSGGSCRVYKVKLKS--------GETVAVKRLLGGTHK----------PETE------TVFRSEIETLGRVR-HGNV 742 (973)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~~~------~~~~~e~~~l~~l~-h~ni 742 (973)
+.|..|-...+|++...+ ++.|.+++.-..... ...+ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 455557778999988753 368888877322110 0001 12234888888875 4444
Q ss_pred eeEEeEEecCCeeEEEEeccCCCChhh--h---------------hhccC--CCCCCC--HHHHHHHHHHHH--------
Q 039922 743 VKLLMCCSGQDFNILVYEYMPNGSLAD--M---------------LHEKG--RSGSLD--WSIRFSIAQGAA-------- 793 (973)
Q Consensus 743 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~ia-------- 793 (973)
.++++++..+ +|+||+++.+|.. + +|... ...... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5666665432 8999998654421 1 11111 011122 223333333221
Q ss_pred --------------HHHH----HHhhc-CCCCeEEeCCCCCCEEeCCC------CceEEeccCcch
Q 039922 794 --------------KGLA----YLHND-CVPAIVHRDVKSHNILLDAE------MVPRVADFGLAK 834 (973)
Q Consensus 794 --------------~~L~----yLH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfGl~~ 834 (973)
.-+. ++... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 22368899999999999877 789999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.89 E-value=0.072 Score=59.27 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=45.0
Q ss_pred ccccccCCeeEEEEEECC--------CCEEEEEEecCCCCCchhHHHHHHHHHHHhcCC-CCCeeeEEeEEecCCeeEEE
Q 039922 688 NLIGSGGSCRVYKVKLKS--------GETVAVKRLLGGTHKPETETVFRSEIETLGRVR-HGNVVKLLMCCSGQDFNILV 758 (973)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 758 (973)
+.+..|-...+|++...+ ++.|++|+........ ....+|..+++.+. +.-..++++.+. -+.|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~---idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF---YDSKVELDVFRYLSNINIAPNIIADFP----EGRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC---CCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh---cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEE
Confidence 456667788999988763 5889999863221111 11346777777774 322345554332 2689
Q ss_pred EeccCCCCh
Q 039922 759 YEYMPNGSL 767 (973)
Q Consensus 759 ~e~~~~gsL 767 (973)
|||++|..+
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999987653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.35 E-value=0.6 Score=51.63 Aligned_cols=29 Identities=28% Similarity=0.418 Sum_probs=24.6
Q ss_pred CeEEeCCCCCCEEe------CCCCceEEeccCcch
Q 039922 806 AIVHRDVKSHNILL------DAEMVPRVADFGLAK 834 (973)
Q Consensus 806 ~ivH~Dlkp~NIll------~~~~~~kl~DfGl~~ 834 (973)
.++|+|+.+.||++ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456789999998775
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.40 E-value=2 Score=42.20 Aligned_cols=115 Identities=10% Similarity=0.096 Sum_probs=79.0
Q ss_pred CCCCeeeEEeEEecCCeeEEEEeccCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCC
Q 039922 738 RHGNVVKLLMCCSGQDFNILVYEYMPNG-SLADMLHEKGRSGSLDWSIRFSIAQGAAKGLAYLHNDCVPAIVHRDVKSHN 816 (973)
Q Consensus 738 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 816 (973)
.||++++. .+-..++...+.|+.-+.+ ++.. ++ ..+...+++++.+|+...++++.. +|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK------SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG------GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH------hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888866 5666677777777754322 2222 22 367889999999999988777766 888999999
Q ss_pred EEeCCCCceEEeccCcchhccccCCCccccccccccccCccccccccCCCCCCCCChhhHHHHHHHHHcCCCCCC
Q 039922 817 ILLDAEMVPRVADFGLAKALQSQEGQSDDAMSCVAGSYGYIAPEYAYTKKVTEKSDVYSFGVVLMELVTGKRPND 891 (973)
Q Consensus 817 Ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~ 891 (973)
++++.++.+++.-.|+-..+ +|.- .+...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l---------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV---------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB---------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC---------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877764322 1220 1111112246678888898887774
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.56 E-value=3 Score=41.13 Aligned_cols=84 Identities=10% Similarity=-0.021 Sum_probs=62.1
Q ss_pred CCCCeeeEEeEEecCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCeEEeCCCCCC
Q 039922 738 RHGNVVKLLMCCSGQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGAAKGLA-YLHNDCVPAIVHRDVKSHN 816 (973)
Q Consensus 738 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~ivH~Dlkp~N 816 (973)
.||++ -..+-.+++...+.|+.-+++.=...++ ..+...+++.+.+|+.... +++.. +|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57887 3444467788777777654332222232 3678899999999998887 67655 888899999
Q ss_pred EEeCCCCceEEeccCcch
Q 039922 817 ILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 817 Ill~~~~~~kl~DfGl~~ 834 (973)
+++|.++.+++.-.|+-.
T Consensus 115 L~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp EEECTTCCEEESCCEETT
T ss_pred EEEeCCCcEEEEEcCCcc
Confidence 999999999998877643
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.54 E-value=0.3 Score=55.10 Aligned_cols=62 Identities=6% Similarity=-0.145 Sum_probs=17.4
Q ss_pred ccccccccCCeeEEEEEECC-CCEEEE------EEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEEe
Q 039922 686 EQNLIGSGGSCRVYKVKLKS-GETVAV------KRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCCS 750 (973)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 750 (973)
..+.+| ||.||+|.+.. ..+||| |.........+....+.+|..+++..+|+|+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 445666 99999998863 467888 766443333444456788889999999999999887754
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=60.55 E-value=6.9 Score=27.38 Aligned_cols=18 Identities=17% Similarity=0.346 Sum_probs=6.8
Q ss_pred hhHHHHHHHHHHHhhhee
Q 039922 634 VILSICVILLVGSLVWFF 651 (973)
Q Consensus 634 ~~~~~~~~l~~~~~~~~~ 651 (973)
++.+++++++++..+|++
T Consensus 17 VVgGv~~~~ii~~~~~~~ 34 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLF 34 (44)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=41.27 E-value=17 Score=25.41 Aligned_cols=13 Identities=15% Similarity=0.404 Sum_probs=4.7
Q ss_pred HHHHHHHHHhhhe
Q 039922 638 ICVILLVGSLVWF 650 (973)
Q Consensus 638 ~~~~l~~~~~~~~ 650 (973)
++++++++..+|+
T Consensus 20 v~~v~ii~~~~~~ 32 (44)
T 2l2t_A 20 LFILVIVGLTFAV 32 (44)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=37.47 E-value=15 Score=24.76 Aligned_cols=11 Identities=45% Similarity=0.676 Sum_probs=4.5
Q ss_pred HHHHHhhheee
Q 039922 642 LLVGSLVWFFK 652 (973)
Q Consensus 642 l~~~~~~~~~~ 652 (973)
+++++++|+++
T Consensus 26 li~~l~~~~~r 36 (38)
T 2k1k_A 26 LLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHee
Confidence 33344444443
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.22 E-value=1.1e+02 Score=31.94 Aligned_cols=136 Identities=17% Similarity=0.092 Sum_probs=70.3
Q ss_pred cccccccCCeeEEEEEECCCCEEEEEEecCCCCCchhHHHHHHHHHHHhcCCCCCeeeEEeEE--------------e--
Q 039922 687 QNLIGSGGSCRVYKVKLKSGETVAVKRLLGGTHKPETETVFRSEIETLGRVRHGNVVKLLMCC--------------S-- 750 (973)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--------------~-- 750 (973)
++....|..| ||.+.. ++..|+||-. .....+.+-.++...-.+.-|...-+. +. .
T Consensus 74 I~~s~~Gstg-vff~~t-d~~~~VVK~s-----~~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 74 IERSEKGTEG-LFFVET-ESGVFIVKRS-----TNIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEECCSTTSC-EEEEEE-SSCEEEEECC-----TTHHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSS
T ss_pred EEeccCCCCC-eEEEEe-CCCEEEEeCc-----HHHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhh
Confidence 3444556544 554444 5889999933 223444555565555556666533222 11 0
Q ss_pred -------cCCeeEEEEeccCCCChhhhhhccCCCCCCCHHHHHHHHHHH--HHHHHHHhhcCC-CCeE-EeCCCCCCEEe
Q 039922 751 -------GQDFNILVYEYMPNGSLADMLHEKGRSGSLDWSIRFSIAQGA--AKGLAYLHNDCV-PAIV-HRDVKSHNILL 819 (973)
Q Consensus 751 -------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i--a~~L~yLH~~~~-~~iv-H~Dlkp~NIll 819 (973)
......++|||.+|..|.+.-... ....+..+ .+.++ +-+++++..+.. .+.+ +.-=.+.|||+
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 012345999999866554432110 00012222 22222 345566665532 1111 12257889999
Q ss_pred CCCCc-eEEeccCcchh
Q 039922 820 DAEMV-PRVADFGLAKA 835 (973)
Q Consensus 820 ~~~~~-~kl~DfGl~~~ 835 (973)
++++. +.++|-+.+..
T Consensus 221 ~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 221 SERGATVVPIDSKIIPL 237 (342)
T ss_dssp ESBTTCEEECSCCCCCC
T ss_pred eCCCCeEEEEcCCcccc
Confidence 77554 88899988743
No 455
>1kdl_A YOPD protein; yersinia, amphipathic alpha helix, beta turn, structural protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=30.53 E-value=28 Score=20.71 Aligned_cols=15 Identities=40% Similarity=0.532 Sum_probs=13.1
Q ss_pred HHHHHHHHhhcccCC
Q 039922 959 MRRVVELLRVDKSSH 973 (973)
Q Consensus 959 ~~evl~~L~~~~~~~ 973 (973)
|.||++.+++...||
T Consensus 4 MkDvlql~qQy~qsh 18 (26)
T 1kdl_A 4 MKDVLRLIEQYVSSH 18 (26)
T ss_dssp HHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHH
Confidence 789999999988887
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.26 E-value=56 Score=27.44 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=25.4
Q ss_pred CCCCCCcccCCCCcccEEecCCcccCCcccccccccccccEeeccC
Q 039922 157 FSGDIPESFGRFPVLKVLNLGGNLLSGLIPSFLGNLTELTHFELGY 202 (973)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 202 (973)
++.+-..+|.++++|+.+.+..+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34344455666666666666543 3434455666666666666644
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.67 E-value=3.1e+02 Score=31.40 Aligned_cols=46 Identities=20% Similarity=0.142 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHH--HHHHHHhhcCCCCeEEeCCCCCCEEeCCCCceEEeccCcch
Q 039922 782 WSIRFSIAQGAA--KGLAYLHNDCVPAIVHRDVKSHNILLDAEMVPRVADFGLAK 834 (973)
Q Consensus 782 ~~~~~~i~~~ia--~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl~~ 834 (973)
+..+...+..+| +.+.|+=.- ||=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 444545554433 345555433 6778999999999999999999874
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=23.28 E-value=88 Score=26.22 Aligned_cols=45 Identities=22% Similarity=0.221 Sum_probs=23.1
Q ss_pred ccccCCcCCCCCCCCCEEEccCCcCcccCchhccCCCccceeeccc
Q 039922 254 LSGKIPHSFSGLASIEQIELFDNQLSGELPESLSNLTTLLRLDISQ 299 (973)
Q Consensus 254 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 299 (973)
++.+-...|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555543 2224445556666666665543
No 459
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=20.96 E-value=30 Score=19.30 Aligned_cols=9 Identities=33% Similarity=1.346 Sum_probs=7.0
Q ss_pred CCCccceeE
Q 039922 58 SPCNWTGIT 66 (973)
Q Consensus 58 ~~C~w~gv~ 66 (973)
..|.|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 359999975
Done!