Query 039923
Match_columns 395
No_of_seqs 162 out of 2196
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 04:48:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 1.5E-43 5E-48 327.2 29.9 342 10-386 3-353 (357)
2 2xve_A Flavin-containing monoo 100.0 4.1E-43 1.4E-47 333.8 28.3 302 10-384 2-340 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 4.8E-43 1.6E-47 337.9 24.4 366 10-386 8-458 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 2.7E-42 9.2E-47 333.1 22.8 380 1-386 1-467 (545)
5 4ap3_A Steroid monooxygenase; 100.0 1.4E-41 4.8E-46 328.4 24.8 371 10-386 21-472 (549)
6 1w4x_A Phenylacetone monooxyge 100.0 1.5E-40 5.2E-45 322.3 27.0 373 10-388 16-469 (542)
7 2gv8_A Monooxygenase; FMO, FAD 100.0 2.8E-39 9.5E-44 307.0 24.7 296 10-384 6-361 (447)
8 3lzw_A Ferredoxin--NADP reduct 100.0 6.2E-40 2.1E-44 299.9 19.4 295 10-389 7-319 (332)
9 3f8d_A Thioredoxin reductase ( 100.0 1.8E-39 6.2E-44 295.6 21.5 288 9-388 14-320 (323)
10 3fbs_A Oxidoreductase; structu 100.0 6.2E-39 2.1E-43 288.6 21.5 284 10-388 2-295 (297)
11 3itj_A Thioredoxin reductase 1 100.0 3.1E-39 1E-43 296.0 18.5 291 8-387 20-337 (338)
12 2q7v_A Thioredoxin reductase; 100.0 2.5E-38 8.7E-43 288.4 23.2 288 10-387 8-314 (325)
13 3r9u_A Thioredoxin reductase; 100.0 1.8E-38 6.1E-43 288.0 20.1 290 9-387 3-314 (315)
14 2q0l_A TRXR, thioredoxin reduc 100.0 4.6E-38 1.6E-42 284.9 22.5 287 10-386 1-310 (311)
15 2zbw_A Thioredoxin reductase; 100.0 3.9E-38 1.3E-42 288.4 22.1 298 10-389 5-321 (335)
16 3ab1_A Ferredoxin--NADP reduct 100.0 8.1E-38 2.8E-42 289.1 23.4 299 10-389 14-332 (360)
17 3cty_A Thioredoxin reductase; 100.0 1E-37 3.5E-42 283.6 22.3 287 10-387 16-318 (319)
18 4gcm_A TRXR, thioredoxin reduc 100.0 1.4E-37 4.6E-42 281.9 20.4 289 9-388 5-309 (312)
19 2a87_A TRXR, TR, thioredoxin r 100.0 1.2E-37 4.1E-42 285.0 19.6 291 9-390 13-321 (335)
20 1fl2_A Alkyl hydroperoxide red 100.0 3.2E-37 1.1E-41 279.2 21.1 288 11-388 2-308 (310)
21 1vdc_A NTR, NADPH dependent th 100.0 2.6E-37 8.8E-42 282.7 20.5 291 10-389 8-327 (333)
22 4fk1_A Putative thioredoxin re 100.0 1.8E-37 6.3E-42 279.8 17.8 285 10-387 6-302 (304)
23 1trb_A Thioredoxin reductase; 100.0 5.1E-37 1.7E-41 279.1 18.1 292 10-389 5-318 (320)
24 4a5l_A Thioredoxin reductase; 100.0 6.9E-37 2.4E-41 277.5 17.3 292 9-386 3-313 (314)
25 3d1c_A Flavin-containing putat 100.0 1.3E-35 4.3E-40 275.4 24.8 308 10-385 4-339 (369)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.3E-35 4.4E-40 286.0 24.0 291 9-389 211-520 (521)
27 4eqs_A Coenzyme A disulfide re 100.0 1.6E-36 5.4E-41 286.3 16.1 288 11-383 1-311 (437)
28 3oc4_A Oxidoreductase, pyridin 100.0 4.4E-35 1.5E-39 278.4 20.4 283 11-383 3-314 (452)
29 3klj_A NAD(FAD)-dependent dehy 100.0 2.7E-37 9.3E-42 286.4 4.0 273 9-384 8-295 (385)
30 1mo9_A ORF3; nucleotide bindin 100.0 4.7E-35 1.6E-39 282.6 18.8 303 9-383 42-378 (523)
31 2bc0_A NADH oxidase; flavoprot 100.0 2.2E-35 7.7E-40 283.0 15.9 287 10-383 35-361 (490)
32 3ntd_A FAD-dependent pyridine 100.0 1.1E-35 3.9E-40 290.7 12.2 288 10-384 1-339 (565)
33 1zmd_A Dihydrolipoyl dehydroge 100.0 1.1E-34 3.9E-39 277.3 18.8 303 9-383 5-345 (474)
34 3iwa_A FAD-dependent pyridine 100.0 2.5E-35 8.5E-40 281.7 14.1 294 10-384 3-330 (472)
35 3ef6_A Toluene 1,2-dioxygenase 100.0 2.2E-35 7.4E-40 276.9 13.0 283 10-384 2-310 (410)
36 3ics_A Coenzyme A-disulfide re 100.0 4.6E-35 1.6E-39 287.3 15.2 289 8-382 34-352 (588)
37 3urh_A Dihydrolipoyl dehydroge 100.0 2.5E-34 8.5E-39 276.1 19.2 305 9-384 24-364 (491)
38 3lxd_A FAD-dependent pyridine 100.0 3.9E-35 1.3E-39 275.9 13.1 285 9-384 8-322 (415)
39 2vdc_G Glutamate synthase [NAD 100.0 4.4E-35 1.5E-39 276.7 13.0 296 9-388 121-447 (456)
40 1xhc_A NADH oxidase /nitrite r 100.0 5.8E-36 2E-40 276.2 6.3 276 10-383 8-297 (367)
41 3l8k_A Dihydrolipoyl dehydroge 100.0 4E-34 1.4E-38 272.7 18.9 291 10-383 4-333 (466)
42 3kd9_A Coenzyme A disulfide re 100.0 2.2E-34 7.5E-39 273.5 16.5 283 10-384 3-316 (449)
43 2gqw_A Ferredoxin reductase; f 100.0 3.8E-34 1.3E-38 268.1 17.1 280 9-384 6-309 (408)
44 1dxl_A Dihydrolipoamide dehydr 100.0 3.8E-34 1.3E-38 273.6 17.4 304 9-383 5-342 (470)
45 2wpf_A Trypanothione reductase 100.0 3.6E-34 1.2E-38 274.5 17.0 299 10-383 7-355 (495)
46 3dk9_A Grase, GR, glutathione 100.0 2.6E-34 9.1E-39 275.1 15.7 299 10-383 20-356 (478)
47 1ebd_A E3BD, dihydrolipoamide 100.0 5E-34 1.7E-38 271.5 17.4 301 10-383 3-333 (455)
48 1ges_A Glutathione reductase; 100.0 2E-34 6.8E-39 273.4 14.4 297 10-383 4-328 (450)
49 1onf_A GR, grase, glutathione 100.0 3.5E-34 1.2E-38 275.2 15.9 296 10-383 2-371 (500)
50 2qae_A Lipoamide, dihydrolipoy 100.0 4.3E-34 1.5E-38 272.9 16.1 303 10-383 2-340 (468)
51 1xdi_A RV3303C-LPDA; reductase 100.0 6.2E-34 2.1E-38 273.7 16.9 306 10-383 2-342 (499)
52 1ojt_A Surface protein; redox- 100.0 1.5E-33 5.1E-38 269.9 19.5 298 10-383 6-349 (482)
53 2r9z_A Glutathione amide reduc 100.0 7E-34 2.4E-38 270.5 16.9 297 10-383 4-327 (463)
54 2hqm_A GR, grase, glutathione 100.0 3E-34 1E-38 274.4 14.0 299 10-383 11-347 (479)
55 1fec_A Trypanothione reductase 100.0 5.7E-34 2E-38 272.9 15.8 301 10-383 3-351 (490)
56 2v3a_A Rubredoxin reductase; a 100.0 5.9E-34 2E-38 265.1 15.1 282 10-383 4-306 (384)
57 3fg2_P Putative rubredoxin red 100.0 7.7E-34 2.6E-38 266.0 15.4 282 11-384 2-311 (404)
58 2a8x_A Dihydrolipoyl dehydroge 100.0 8.2E-34 2.8E-38 270.6 15.7 297 11-382 4-333 (464)
59 4dna_A Probable glutathione re 100.0 4.1E-34 1.4E-38 272.5 13.5 297 10-384 5-332 (463)
60 3lad_A Dihydrolipoamide dehydr 100.0 4.6E-33 1.6E-37 266.4 20.6 304 9-384 2-344 (476)
61 2eq6_A Pyruvate dehydrogenase 100.0 1.7E-33 5.7E-38 268.2 17.5 297 10-383 6-334 (464)
62 1v59_A Dihydrolipoamide dehydr 100.0 2.1E-33 7E-38 269.0 18.1 303 10-383 5-350 (478)
63 2cdu_A NADPH oxidase; flavoenz 100.0 3.8E-34 1.3E-38 272.0 12.6 287 11-383 1-317 (452)
64 3o0h_A Glutathione reductase; 100.0 1E-33 3.5E-38 271.2 15.5 298 10-384 26-352 (484)
65 3ic9_A Dihydrolipoamide dehydr 100.0 1.3E-34 4.3E-39 277.6 8.8 303 10-383 8-338 (492)
66 2yqu_A 2-oxoglutarate dehydrog 100.0 2.5E-33 8.5E-38 266.7 17.6 300 11-383 2-327 (455)
67 1zk7_A HGII, reductase, mercur 100.0 5.3E-34 1.8E-38 272.2 12.3 299 10-383 4-334 (467)
68 3s5w_A L-ornithine 5-monooxyge 100.0 1E-32 3.5E-37 263.4 21.2 336 10-384 30-447 (463)
69 1lvl_A Dihydrolipoamide dehydr 100.0 1.5E-32 5E-37 261.2 19.4 296 10-383 5-330 (458)
70 1q1r_A Putidaredoxin reductase 100.0 1.1E-33 3.7E-38 266.8 11.6 285 10-384 4-320 (431)
71 1nhp_A NADH peroxidase; oxidor 100.0 2.8E-33 9.6E-38 265.7 13.7 284 11-383 1-316 (447)
72 3cgb_A Pyridine nucleotide-dis 100.0 2.9E-33 1E-37 267.6 13.7 286 10-383 36-353 (480)
73 4b63_A L-ornithine N5 monooxyg 100.0 9.5E-32 3.3E-36 257.7 22.1 343 8-362 37-457 (501)
74 3qfa_A Thioredoxin reductase 1 100.0 9.4E-33 3.2E-37 266.2 14.5 301 10-383 32-380 (519)
75 3dgh_A TRXR-1, thioredoxin red 100.0 2.2E-32 7.6E-37 262.0 15.5 301 9-383 8-352 (483)
76 3dgz_A Thioredoxin reductase 2 100.0 2.9E-32 9.9E-37 261.4 15.7 303 9-384 5-353 (488)
77 3sx6_A Sulfide-quinone reducta 100.0 1.2E-32 4.1E-37 260.5 11.4 292 10-390 4-349 (437)
78 4g6h_A Rotenone-insensitive NA 100.0 9.3E-33 3.2E-37 264.2 7.0 285 9-384 41-400 (502)
79 4b1b_A TRXR, thioredoxin reduc 100.0 2.3E-32 7.8E-37 262.1 8.9 304 10-384 42-385 (542)
80 3h8l_A NADH oxidase; membrane 100.0 4.9E-32 1.7E-36 254.4 10.5 283 10-385 1-336 (409)
81 2x8g_A Thioredoxin glutathione 100.0 3.9E-30 1.3E-34 252.7 18.7 300 9-383 106-459 (598)
82 1lqt_A FPRA; NADP+ derivative, 100.0 5.3E-31 1.8E-35 249.2 11.9 298 10-386 3-388 (456)
83 1cjc_A Protein (adrenodoxin re 100.0 6.8E-31 2.3E-35 248.7 11.9 304 9-386 5-396 (460)
84 3k30_A Histamine dehydrogenase 100.0 3.2E-31 1.1E-35 263.8 7.9 270 9-388 390-678 (690)
85 1m6i_A Programmed cell death p 100.0 4.9E-31 1.7E-35 252.6 7.8 301 10-385 11-354 (493)
86 1gte_A Dihydropyrimidine dehyd 100.0 5.7E-30 1.9E-34 264.1 16.1 277 10-385 187-508 (1025)
87 1o94_A Tmadh, trimethylamine d 100.0 5.2E-30 1.8E-34 256.0 9.7 275 9-389 388-704 (729)
88 3h28_A Sulfide-quinone reducta 100.0 1.9E-30 6.6E-35 244.9 5.1 286 10-389 2-337 (430)
89 3vrd_B FCCB subunit, flavocyto 100.0 1.1E-28 3.7E-33 231.2 10.0 288 10-388 2-327 (401)
90 2gag_A Heterotetrameric sarcos 100.0 7.7E-28 2.6E-32 246.6 17.0 275 10-386 128-445 (965)
91 3hyw_A Sulfide-quinone reducta 100.0 1.4E-29 4.9E-34 238.7 2.7 288 10-390 2-338 (430)
92 1ps9_A 2,4-dienoyl-COA reducta 99.9 5.4E-28 1.9E-32 240.0 13.3 276 9-380 372-671 (671)
93 1y56_A Hypothetical protein PH 99.9 1.3E-26 4.4E-31 222.0 11.8 253 10-384 108-376 (493)
94 2ywl_A Thioredoxin reductase r 99.7 1.8E-17 6.2E-22 137.0 11.0 163 174-388 3-174 (180)
95 3fpz_A Thiazole biosynthetic e 99.7 2.9E-20 9.9E-25 168.8 -6.6 150 10-205 65-216 (326)
96 2gqf_A Hypothetical protein HI 99.7 1.5E-17 5.1E-22 154.6 11.3 186 10-200 4-259 (401)
97 2cul_A Glucose-inhibited divis 99.6 1.8E-15 6E-20 130.2 13.2 123 10-143 3-127 (232)
98 2e5v_A L-aspartate oxidase; ar 99.6 1.3E-16 4.5E-21 151.6 3.8 191 12-212 1-248 (472)
99 3v76_A Flavoprotein; structura 99.4 6.1E-13 2.1E-17 124.0 13.1 131 10-143 27-189 (417)
100 2ywl_A Thioredoxin reductase r 99.4 5.4E-13 1.8E-17 109.9 10.3 112 10-145 1-112 (180)
101 3cgv_A Geranylgeranyl reductas 99.4 2.1E-12 7.3E-17 120.2 12.2 130 10-141 4-162 (397)
102 3fmw_A Oxygenase; mithramycin, 99.4 2.5E-12 8.5E-17 124.7 13.0 131 9-141 48-207 (570)
103 3oz2_A Digeranylgeranylglycero 99.4 5.2E-12 1.8E-16 117.3 12.6 131 10-142 4-163 (397)
104 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.6E-12 5.6E-17 125.5 8.9 169 10-202 28-220 (651)
105 2qa1_A PGAE, polyketide oxygen 99.3 6.4E-12 2.2E-16 120.2 12.8 135 6-142 7-166 (500)
106 1yvv_A Amine oxidase, flavin-c 99.3 2.5E-11 8.4E-16 110.3 14.4 128 10-141 2-162 (336)
107 3nix_A Flavoprotein/dehydrogen 99.3 1.2E-11 4E-16 116.1 12.3 132 10-141 5-166 (421)
108 2qa2_A CABE, polyketide oxygen 99.3 9.8E-12 3.4E-16 118.9 11.8 134 7-142 9-167 (499)
109 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 3.5E-12 1.2E-16 116.3 8.2 128 10-139 1-163 (342)
110 2bry_A NEDD9 interacting prote 99.3 3.3E-12 1.1E-16 122.1 7.7 134 8-143 90-232 (497)
111 3rp8_A Flavoprotein monooxygen 99.3 5.6E-12 1.9E-16 117.8 9.1 132 9-144 22-184 (407)
112 3alj_A 2-methyl-3-hydroxypyrid 99.3 7.6E-12 2.6E-16 115.7 9.6 133 1-141 1-160 (379)
113 2i0z_A NAD(FAD)-utilizing dehy 99.3 8.7E-12 3E-16 117.8 9.9 134 8-142 24-192 (447)
114 1ryi_A Glycine oxidase; flavop 99.3 2.2E-11 7.5E-16 112.7 12.2 62 79-142 159-220 (382)
115 3ihg_A RDME; flavoenzyme, anth 99.3 2.5E-11 8.5E-16 117.5 12.9 130 10-141 5-183 (535)
116 3nlc_A Uncharacterized protein 99.3 5.4E-11 1.9E-15 114.0 14.5 132 9-141 106-277 (549)
117 2xdo_A TETX2 protein; tetracyc 99.3 2E-11 6.8E-16 113.7 10.7 131 10-144 26-185 (398)
118 2gmh_A Electron transfer flavo 99.3 8.3E-11 2.8E-15 114.6 15.3 134 9-142 34-218 (584)
119 2uzz_A N-methyl-L-tryptophan o 99.2 4.2E-11 1.5E-15 110.4 12.1 62 83-146 148-209 (372)
120 1k0i_A P-hydroxybenzoate hydro 99.2 1.7E-11 5.7E-16 114.1 9.1 134 10-144 2-166 (394)
121 2zxi_A TRNA uridine 5-carboxym 99.2 1.7E-11 5.8E-16 118.0 8.2 170 10-203 27-220 (637)
122 3dje_A Fructosyl amine: oxygen 99.2 7.1E-11 2.4E-15 111.4 12.3 62 82-145 159-225 (438)
123 2x3n_A Probable FAD-dependent 99.2 2.4E-11 8.1E-16 113.2 8.9 131 10-142 6-167 (399)
124 3e1t_A Halogenase; flavoprotei 99.2 8E-11 2.7E-15 113.2 11.9 132 10-143 7-174 (512)
125 3i3l_A Alkylhalidase CMLS; fla 99.2 1.2E-10 4E-15 113.2 13.0 130 11-141 24-188 (591)
126 3nyc_A D-arginine dehydrogenas 99.2 3.6E-11 1.2E-15 111.2 9.0 59 81-141 151-209 (381)
127 2vou_A 2,6-dihydroxypyridine h 99.2 2.9E-10 1E-14 105.7 13.3 129 10-142 5-154 (397)
128 1rp0_A ARA6, thiazole biosynth 99.2 1.7E-10 5.8E-15 102.1 11.0 129 10-139 39-189 (284)
129 3atr_A Conserved archaeal prot 99.1 7.7E-11 2.6E-15 111.6 9.2 130 10-142 6-163 (453)
130 3cp8_A TRNA uridine 5-carboxym 99.1 3.7E-11 1.3E-15 116.0 7.0 171 9-203 20-215 (641)
131 3dme_A Conserved exported prot 99.1 1.1E-10 3.8E-15 107.3 9.9 61 81-142 147-210 (369)
132 1y56_B Sarcosine oxidase; dehy 99.1 3.2E-10 1.1E-14 104.8 13.0 59 81-141 146-205 (382)
133 2r0c_A REBC; flavin adenine di 99.1 3E-10 1E-14 110.0 12.9 127 11-142 27-197 (549)
134 2gf3_A MSOX, monomeric sarcosi 99.1 3E-10 1E-14 105.3 11.9 58 82-141 148-205 (389)
135 2dkh_A 3-hydroxybenzoate hydro 99.1 5.7E-10 1.9E-14 110.0 14.1 133 10-142 32-212 (639)
136 3ps9_A TRNA 5-methylaminomethy 99.1 3.1E-10 1.1E-14 112.8 11.9 59 82-142 415-474 (676)
137 3c96_A Flavin-containing monoo 99.1 8.4E-10 2.9E-14 103.1 13.6 131 10-143 4-171 (410)
138 2gag_B Heterotetrameric sarcos 99.1 4.2E-10 1.5E-14 104.9 11.3 60 81-141 171-230 (405)
139 3pvc_A TRNA 5-methylaminomethy 99.1 9.2E-10 3.1E-14 109.6 14.2 59 82-142 410-470 (689)
140 2oln_A NIKD protein; flavoprot 99.1 6E-10 2.1E-14 103.6 11.7 57 83-141 152-208 (397)
141 1y0p_A Fumarate reductase flav 99.1 1.3E-09 4.4E-14 106.2 14.0 133 10-142 126-318 (571)
142 3jsk_A Cypbp37 protein; octame 99.1 7E-10 2.4E-14 99.2 10.8 132 10-141 79-251 (344)
143 4hb9_A Similarities with proba 99.1 5.9E-10 2E-14 104.0 10.7 128 12-143 3-168 (412)
144 1qo8_A Flavocytochrome C3 fuma 99.0 2.7E-09 9.3E-14 103.7 14.2 134 9-142 120-313 (566)
145 3ka7_A Oxidoreductase; structu 99.0 1.2E-09 3.9E-14 102.6 10.1 54 86-141 198-252 (425)
146 4dgk_A Phytoene dehydrogenase; 99.0 2E-09 6.9E-14 103.2 11.8 53 86-140 223-277 (501)
147 3nrn_A Uncharacterized protein 99.0 9.9E-10 3.4E-14 103.0 8.7 39 11-49 1-39 (421)
148 2aqj_A Tryptophan halogenase, 99.0 9E-10 3.1E-14 106.6 8.5 61 81-142 162-223 (538)
149 2weu_A Tryptophan 5-halogenase 99.0 1.3E-09 4.3E-14 104.9 9.2 63 80-143 169-232 (511)
150 2gjc_A Thiazole biosynthetic e 99.0 3.7E-09 1.3E-13 94.0 11.3 104 11-114 66-177 (326)
151 3da1_A Glycerol-3-phosphate de 99.0 2.2E-09 7.4E-14 104.1 10.6 60 81-141 167-232 (561)
152 1pn0_A Phenol 2-monooxygenase; 99.0 7.2E-09 2.5E-13 102.3 14.3 134 10-143 8-232 (665)
153 2qcu_A Aerobic glycerol-3-phos 98.9 4.1E-09 1.4E-13 100.9 11.9 59 82-142 147-211 (501)
154 3kkj_A Amine oxidase, flavin-c 98.9 1E-09 3.6E-14 96.6 7.1 49 9-57 1-49 (336)
155 3c4n_A Uncharacterized protein 98.9 6.6E-10 2.3E-14 103.6 6.0 58 82-141 170-236 (405)
156 3nks_A Protoporphyrinogen oxid 98.9 3E-09 1E-13 101.3 10.1 53 86-139 236-288 (477)
157 4at0_A 3-ketosteroid-delta4-5a 98.9 1.1E-08 3.7E-13 98.3 13.9 57 85-141 203-264 (510)
158 3k7m_X 6-hydroxy-L-nicotine ox 98.9 7.7E-09 2.6E-13 97.2 12.4 39 10-48 1-39 (431)
159 2e4g_A Tryptophan halogenase; 98.9 7E-09 2.4E-13 100.5 12.0 61 81-142 191-253 (550)
160 2pyx_A Tryptophan halogenase; 98.9 4.9E-09 1.7E-13 101.0 10.7 61 81-142 172-234 (526)
161 1pj5_A N,N-dimethylglycine oxi 98.9 7.9E-09 2.7E-13 105.1 12.4 59 82-141 149-207 (830)
162 1d4d_A Flavocytochrome C fumar 98.9 2.4E-08 8.2E-13 97.1 14.8 133 10-142 126-318 (572)
163 3i6d_A Protoporphyrinogen oxid 98.9 2.2E-09 7.5E-14 102.1 7.0 39 10-48 5-49 (470)
164 2yqu_A 2-oxoglutarate dehydrog 98.8 1.4E-08 5E-13 96.0 11.6 99 10-145 167-266 (455)
165 2v3a_A Rubredoxin reductase; a 98.8 2.4E-08 8.3E-13 92.3 11.8 96 10-139 145-241 (384)
166 1nhp_A NADH peroxidase; oxidor 98.8 1E-08 3.4E-13 96.9 9.2 102 9-146 148-249 (447)
167 3c4a_A Probable tryptophan hyd 98.8 8.9E-10 3E-14 101.8 1.2 119 11-142 1-144 (381)
168 3axb_A Putative oxidoreductase 98.8 1.3E-08 4.3E-13 96.2 8.7 61 81-141 178-254 (448)
169 1s3e_A Amine oxidase [flavin-c 98.8 3.7E-08 1.3E-12 94.9 11.5 39 10-48 4-42 (520)
170 2eq6_A Pyruvate dehydrogenase 98.8 3.9E-08 1.3E-12 93.2 11.2 100 10-146 169-274 (464)
171 1zk7_A HGII, reductase, mercur 98.8 5.9E-08 2E-12 92.1 12.4 94 10-139 176-269 (467)
172 1ebd_A E3BD, dihydrolipoamide 98.7 5.6E-08 1.9E-12 91.9 12.1 99 10-145 170-272 (455)
173 1v59_A Dihydrolipoamide dehydr 98.7 5.9E-08 2E-12 92.4 12.1 101 10-145 183-289 (478)
174 2rgh_A Alpha-glycerophosphate 98.7 4.1E-08 1.4E-12 95.3 10.9 59 82-141 186-250 (571)
175 1ges_A Glutathione reductase; 98.7 6E-08 2E-12 91.5 11.6 100 10-145 167-267 (450)
176 2r9z_A Glutathione amide reduc 98.7 6.8E-08 2.3E-12 91.5 12.0 99 10-145 166-266 (463)
177 3cgb_A Pyridine nucleotide-dis 98.7 5.7E-08 1.9E-12 92.5 10.7 96 9-139 185-280 (480)
178 1kf6_A Fumarate reductase flav 98.7 1.8E-07 6.1E-12 91.3 14.0 133 10-143 5-199 (602)
179 3oc4_A Oxidoreductase, pyridin 98.7 1.2E-07 4E-12 89.6 12.4 100 10-145 147-246 (452)
180 1lvl_A Dihydrolipoamide dehydr 98.7 7.5E-08 2.5E-12 91.1 11.0 98 10-146 171-271 (458)
181 4b1b_A TRXR, thioredoxin reduc 98.7 1.2E-07 4.2E-12 90.9 12.5 98 10-145 223-321 (542)
182 3lxd_A FAD-dependent pyridine 98.7 1.3E-07 4.3E-12 88.4 12.0 97 10-139 152-249 (415)
183 1onf_A GR, grase, glutathione 98.7 1.9E-07 6.4E-12 89.4 13.0 100 10-145 176-277 (500)
184 2wdq_A Succinate dehydrogenase 98.7 2.1E-07 7.1E-12 90.6 13.4 133 10-142 7-207 (588)
185 1xdi_A RV3303C-LPDA; reductase 98.7 1.8E-07 6.1E-12 89.5 12.6 95 10-139 182-277 (499)
186 2bc0_A NADH oxidase; flavoprot 98.7 7.7E-08 2.6E-12 91.8 9.9 100 10-145 194-293 (490)
187 3fg2_P Putative rubredoxin red 98.6 1.7E-07 5.8E-12 87.2 11.7 97 10-139 142-239 (404)
188 1zmd_A Dihydrolipoyl dehydroge 98.6 1.5E-07 5E-12 89.5 11.4 101 10-145 178-284 (474)
189 3ef6_A Toluene 1,2-dioxygenase 98.6 5.7E-08 1.9E-12 90.6 8.1 96 10-139 143-239 (410)
190 2cdu_A NADPH oxidase; flavoenz 98.6 1.1E-07 3.9E-12 89.8 10.3 100 10-145 149-249 (452)
191 1q1r_A Putidaredoxin reductase 98.6 2.1E-07 7.3E-12 87.2 12.0 97 10-139 149-248 (431)
192 2a8x_A Dihydrolipoyl dehydroge 98.6 2.2E-07 7.7E-12 88.0 12.3 99 10-145 171-273 (464)
193 2gqw_A Ferredoxin reductase; f 98.6 1.8E-07 6.2E-12 87.0 11.5 92 10-139 145-237 (408)
194 1chu_A Protein (L-aspartate ox 98.6 7.3E-08 2.5E-12 92.8 8.7 38 9-47 7-44 (540)
195 1mo9_A ORF3; nucleotide bindin 98.6 2.5E-07 8.5E-12 89.0 12.4 95 11-139 215-314 (523)
196 2hqm_A GR, grase, glutathione 98.6 2.2E-07 7.4E-12 88.4 11.6 101 10-145 185-287 (479)
197 1fec_A Trypanothione reductase 98.6 2E-07 6.8E-12 88.9 11.2 100 10-145 187-290 (490)
198 2qae_A Lipoamide, dihydrolipoy 98.6 3E-07 1E-11 87.3 12.4 99 10-145 174-278 (468)
199 3iwa_A FAD-dependent pyridine 98.6 2.5E-07 8.6E-12 87.9 11.8 96 10-139 159-256 (472)
200 2wpf_A Trypanothione reductase 98.6 3.1E-07 1.1E-11 87.7 12.3 100 10-145 191-294 (495)
201 3urh_A Dihydrolipoyl dehydroge 98.6 3.2E-07 1.1E-11 87.6 12.5 99 10-145 198-302 (491)
202 3ic9_A Dihydrolipoamide dehydr 98.6 3.4E-07 1.2E-11 87.3 12.6 98 10-145 174-276 (492)
203 2h88_A Succinate dehydrogenase 98.6 2.7E-07 9.4E-12 90.0 12.0 132 10-142 18-218 (621)
204 1ojt_A Surface protein; redox- 98.6 1.6E-07 5.6E-12 89.4 10.0 99 10-145 185-288 (482)
205 1xhc_A NADH oxidase /nitrite r 98.6 1.4E-07 4.6E-12 86.6 9.0 89 11-139 144-232 (367)
206 1dxl_A Dihydrolipoamide dehydr 98.6 1.9E-07 6.4E-12 88.7 10.3 99 10-145 177-281 (470)
207 4gut_A Lysine-specific histone 98.6 2.5E-07 8.6E-12 92.4 11.1 38 10-47 336-373 (776)
208 3dk9_A Grase, GR, glutathione 98.6 4.2E-07 1.4E-11 86.5 12.2 101 10-145 187-295 (478)
209 3o0h_A Glutathione reductase; 98.6 4.4E-07 1.5E-11 86.5 12.4 95 10-139 191-286 (484)
210 4gde_A UDP-galactopyranose mut 98.5 5.1E-08 1.7E-12 93.7 5.5 43 8-50 8-51 (513)
211 1jnr_A Adenylylsulfate reducta 98.5 4.1E-07 1.4E-11 89.5 12.0 136 10-146 22-223 (643)
212 2bs2_A Quinol-fumarate reducta 98.5 5.1E-07 1.8E-11 88.7 12.6 59 83-142 157-221 (660)
213 3ntd_A FAD-dependent pyridine 98.5 4.7E-07 1.6E-11 88.0 12.1 97 10-139 151-265 (565)
214 3lad_A Dihydrolipoamide dehydr 98.5 6.1E-07 2.1E-11 85.3 12.2 99 10-145 180-282 (476)
215 1m6i_A Programmed cell death p 98.5 5.4E-07 1.8E-11 85.9 11.7 96 10-139 180-280 (493)
216 3gyx_A Adenylylsulfate reducta 98.5 2.9E-07 9.8E-12 90.4 9.5 35 10-44 22-62 (662)
217 1rp0_A ARA6, thiazole biosynth 98.5 2.1E-07 7.1E-12 82.1 7.2 192 173-386 40-276 (284)
218 4eqs_A Coenzyme A disulfide re 98.5 3.5E-07 1.2E-11 85.8 9.2 94 10-144 147-241 (437)
219 3dgh_A TRXR-1, thioredoxin red 98.5 9.1E-07 3.1E-11 84.3 11.8 95 10-139 187-287 (483)
220 4dna_A Probable glutathione re 98.5 9.1E-07 3.1E-11 83.8 11.5 96 10-139 170-266 (463)
221 3kd9_A Coenzyme A disulfide re 98.5 7.6E-07 2.6E-11 84.0 10.7 95 10-139 148-242 (449)
222 3s5w_A L-ornithine 5-monooxyge 98.4 1.2E-06 4.1E-11 83.0 12.0 123 10-139 227-375 (463)
223 3dgz_A Thioredoxin reductase 2 98.4 1.9E-06 6.6E-11 82.1 13.4 99 10-145 185-289 (488)
224 1trb_A Thioredoxin reductase; 98.4 1E-06 3.6E-11 78.9 10.9 94 10-139 145-245 (320)
225 2b9w_A Putative aminooxidase; 98.4 3E-07 1E-11 86.0 7.5 44 9-52 5-49 (424)
226 2zbw_A Thioredoxin reductase; 98.4 1.3E-06 4.5E-11 78.8 10.6 93 10-139 152-250 (335)
227 3ics_A Coenzyme A-disulfide re 98.4 1.1E-06 3.7E-11 85.9 10.7 93 10-139 187-280 (588)
228 3qfa_A Thioredoxin reductase 1 98.4 3.8E-06 1.3E-10 80.6 13.0 100 10-145 210-317 (519)
229 2ivd_A PPO, PPOX, protoporphyr 98.3 3.9E-07 1.3E-11 86.7 6.0 43 7-49 13-55 (478)
230 3hdq_A UDP-galactopyranose mut 98.3 5.3E-07 1.8E-11 82.9 6.4 44 9-52 28-71 (397)
231 1sez_A Protoporphyrinogen oxid 98.3 4.1E-07 1.4E-11 87.2 5.6 42 10-51 13-54 (504)
232 3d1c_A Flavin-containing putat 98.3 1.7E-06 5.9E-11 79.2 9.4 106 10-145 166-274 (369)
233 2bcg_G Secretory pathway GDP d 98.3 5.8E-07 2E-11 84.8 6.1 43 9-51 10-52 (453)
234 2e1m_A L-glutamate oxidase; L- 98.3 5.6E-07 1.9E-11 82.0 5.6 44 9-52 43-87 (376)
235 1v0j_A UDP-galactopyranose mut 98.3 6.2E-07 2.1E-11 83.1 6.0 43 10-52 7-50 (399)
236 4g6h_A Rotenone-insensitive NA 98.3 2E-06 6.9E-11 82.0 9.5 94 12-140 219-331 (502)
237 4dsg_A UDP-galactopyranose mut 98.3 1.2E-06 4.1E-11 83.3 7.4 51 9-59 8-60 (484)
238 3klj_A NAD(FAD)-dependent dehy 98.3 3.9E-07 1.3E-11 84.0 3.8 84 10-139 146-229 (385)
239 1rsg_A FMS1 protein; FAD bindi 98.3 5.5E-07 1.9E-11 86.6 4.7 40 10-49 8-48 (516)
240 3ab1_A Ferredoxin--NADP reduct 98.3 2.6E-06 9E-11 77.7 9.0 94 10-139 163-261 (360)
241 3hyw_A Sulfide-quinone reducta 98.2 2.8E-06 9.5E-11 79.6 8.6 103 173-323 3-110 (430)
242 2x8g_A Thioredoxin glutathione 98.2 1.2E-05 4E-10 78.7 13.0 99 10-144 286-396 (598)
243 2yg5_A Putrescine oxidase; oxi 98.2 1.3E-06 4.3E-11 82.5 5.8 41 10-50 5-45 (453)
244 3itj_A Thioredoxin reductase 1 98.2 5.9E-06 2E-10 74.5 9.9 90 10-139 173-269 (338)
245 3l8k_A Dihydrolipoyl dehydroge 98.2 7.3E-06 2.5E-10 77.6 10.8 99 10-146 172-275 (466)
246 2vvm_A Monoamine oxidase N; FA 98.2 1.7E-06 5.8E-11 82.7 6.3 39 11-49 40-78 (495)
247 1i8t_A UDP-galactopyranose mut 98.2 1.4E-06 4.6E-11 79.8 5.0 42 11-52 2-43 (367)
248 3lov_A Protoporphyrinogen oxid 98.2 1.6E-06 5.6E-11 82.3 5.6 41 10-50 4-46 (475)
249 3vrd_B FCCB subunit, flavocyto 98.2 4.5E-06 1.5E-10 77.4 8.5 106 171-325 1-111 (401)
250 2jae_A L-amino acid oxidase; o 98.1 1.8E-06 6E-11 82.4 5.6 41 9-49 10-50 (489)
251 3ihm_A Styrene monooxygenase A 98.1 1.1E-06 3.7E-11 82.4 3.9 35 9-43 21-55 (430)
252 3sx6_A Sulfide-quinone reducta 98.1 8.8E-06 3E-10 76.3 9.5 105 172-324 4-114 (437)
253 3cty_A Thioredoxin reductase; 98.1 1.4E-05 4.9E-10 71.5 10.3 90 10-139 155-250 (319)
254 3h8l_A NADH oxidase; membrane 98.1 1.1E-05 3.7E-10 75.0 9.8 104 173-324 2-115 (409)
255 1fl2_A Alkyl hydroperoxide red 98.1 1.6E-05 5.4E-10 70.8 10.5 90 10-139 144-240 (310)
256 2q7v_A Thioredoxin reductase; 98.1 1.3E-05 4.5E-10 71.9 10.0 90 10-139 152-247 (325)
257 2q0l_A TRXR, thioredoxin reduc 98.1 1.2E-05 3.9E-10 71.8 9.3 91 10-139 143-239 (311)
258 2bi7_A UDP-galactopyranose mut 98.1 2.8E-06 9.6E-11 78.2 5.2 44 11-54 4-47 (384)
259 1vdc_A NTR, NADPH dependent th 98.1 1.5E-05 5.2E-10 71.7 9.9 92 10-139 159-257 (333)
260 1b37_A Protein (polyamine oxid 98.1 4E-06 1.4E-10 79.5 6.3 43 10-52 4-47 (472)
261 2cul_A Glucose-inhibited divis 98.1 8.5E-06 2.9E-10 69.4 7.6 175 173-384 4-231 (232)
262 3lzw_A Ferredoxin--NADP reduct 98.1 1.1E-05 3.7E-10 72.5 8.7 89 10-139 154-248 (332)
263 2a87_A TRXR, TR, thioredoxin r 98.0 8.9E-06 3.1E-10 73.4 7.8 96 10-145 155-254 (335)
264 3f8d_A Thioredoxin reductase ( 98.0 1.8E-05 6.3E-10 70.7 9.8 90 10-139 154-249 (323)
265 3fbs_A Oxidoreductase; structu 98.0 5E-06 1.7E-10 73.5 5.6 83 10-139 141-224 (297)
266 1d5t_A Guanine nucleotide diss 98.0 6.1E-06 2.1E-10 77.3 6.3 42 10-51 6-47 (433)
267 1c0p_A D-amino acid oxidase; a 98.0 4.4E-06 1.5E-10 76.3 5.1 34 10-43 6-39 (363)
268 3k30_A Histamine dehydrogenase 98.0 6.1E-06 2.1E-10 82.0 6.5 94 10-139 523-622 (690)
269 2iid_A L-amino-acid oxidase; f 98.0 4.7E-06 1.6E-10 79.7 5.1 41 9-49 32-72 (498)
270 3r9u_A Thioredoxin reductase; 98.0 2.4E-05 8.2E-10 69.7 9.3 91 10-139 147-242 (315)
271 3g5s_A Methylenetetrahydrofola 98.0 8.8E-06 3E-10 73.4 5.8 36 10-45 1-36 (443)
272 3h28_A Sulfide-quinone reducta 97.9 2.8E-05 9.4E-10 72.8 8.7 105 173-325 3-112 (430)
273 3p1w_A Rabgdi protein; GDI RAB 97.9 8.1E-06 2.8E-10 76.6 4.8 42 10-51 20-61 (475)
274 2z3y_A Lysine-specific histone 97.8 1.5E-05 5.2E-10 78.7 6.1 42 9-50 106-147 (662)
275 1hyu_A AHPF, alkyl hydroperoxi 97.8 6.5E-05 2.2E-09 72.0 10.3 90 10-139 355-451 (521)
276 2gag_A Heterotetrameric sarcos 97.8 6E-05 2.1E-09 77.6 10.4 90 11-144 285-384 (965)
277 2xag_A Lysine-specific histone 97.8 1.8E-05 6.2E-10 79.7 6.3 42 9-50 277-318 (852)
278 3v76_A Flavoprotein; structura 97.8 1E-05 3.5E-10 75.2 3.7 149 171-323 26-188 (417)
279 3g3e_A D-amino-acid oxidase; F 97.8 1.2E-05 4.1E-10 73.0 3.8 32 12-43 2-39 (351)
280 2xve_A Flavin-containing monoo 97.8 6.2E-05 2.1E-09 71.1 8.3 83 10-147 197-280 (464)
281 2vdc_G Glutamate synthase [NAD 97.7 7.1E-05 2.4E-09 70.4 8.3 93 10-139 264-376 (456)
282 4a5l_A Thioredoxin reductase; 97.7 9E-05 3.1E-09 65.9 8.5 96 10-145 152-252 (314)
283 3pl8_A Pyranose 2-oxidase; sub 97.7 2.2E-05 7.7E-10 76.7 4.4 39 10-48 46-84 (623)
284 3gwf_A Cyclohexanone monooxyge 97.6 0.00015 5.3E-09 69.6 9.2 35 10-44 178-212 (540)
285 1ps9_A 2,4-dienoyl-COA reducta 97.6 0.00014 4.9E-09 71.9 9.2 120 10-139 494-626 (671)
286 4a9w_A Monooxygenase; baeyer-v 97.6 5.5E-05 1.9E-09 68.6 5.5 33 10-43 163-195 (357)
287 1lqt_A FPRA; NADP+ derivative, 97.6 0.00024 8.2E-09 66.8 10.0 129 10-142 147-327 (456)
288 2bry_A NEDD9 interacting prote 97.6 9.5E-05 3.2E-09 70.4 6.8 35 171-205 91-125 (497)
289 1o94_A Tmadh, trimethylamine d 97.6 8.9E-05 3.1E-09 74.0 6.8 93 10-139 528-644 (729)
290 2gv8_A Monooxygenase; FMO, FAD 97.6 0.00019 6.5E-09 67.4 8.6 34 10-43 212-246 (447)
291 4gcm_A TRXR, thioredoxin reduc 97.6 0.00031 1.1E-08 62.4 9.6 35 10-44 145-179 (312)
292 2gqf_A Hypothetical protein HI 97.5 0.00015 5.1E-09 67.0 7.5 33 173-205 5-37 (401)
293 3nlc_A Uncharacterized protein 97.5 8.9E-05 3E-09 71.0 6.1 35 171-205 106-140 (549)
294 2i0z_A NAD(FAD)-utilizing dehy 97.5 0.00013 4.6E-09 68.4 7.1 149 173-323 27-192 (447)
295 4fk1_A Putative thioredoxin re 97.5 0.00018 6E-09 63.8 7.4 32 174-205 8-39 (304)
296 1cjc_A Protein (adrenodoxin re 97.5 0.00047 1.6E-08 64.9 10.4 127 10-141 145-333 (460)
297 3t37_A Probable dehydrogenase; 97.5 5.6E-05 1.9E-09 72.7 3.7 36 9-44 16-52 (526)
298 1kdg_A CDH, cellobiose dehydro 97.4 8.8E-05 3E-09 71.6 4.7 35 9-43 6-40 (546)
299 1vg0_A RAB proteins geranylger 97.4 0.0001 3.4E-09 71.5 5.0 51 1-53 1-51 (650)
300 3ayj_A Pro-enzyme of L-phenyla 97.4 4.9E-05 1.7E-09 74.6 2.4 36 10-45 56-100 (721)
301 1gte_A Dihydropyrimidine dehyd 97.4 0.00075 2.6E-08 70.0 11.2 91 10-139 332-440 (1025)
302 3alj_A 2-methyl-3-hydroxypyrid 97.4 0.00051 1.7E-08 62.9 8.9 137 172-324 11-162 (379)
303 3uox_A Otemo; baeyer-villiger 97.4 0.00037 1.3E-08 67.0 8.2 34 172-205 9-42 (545)
304 3q9t_A Choline dehydrogenase a 97.3 0.00014 4.7E-09 70.3 4.0 36 9-44 5-41 (577)
305 2vou_A 2,6-dihydroxypyridine h 97.3 0.00059 2E-08 62.9 7.9 34 172-205 5-38 (397)
306 4ap3_A Steroid monooxygenase; 97.2 0.00072 2.5E-08 65.1 8.4 34 172-205 21-54 (549)
307 3jsk_A Cypbp37 protein; octame 97.2 0.00024 8.3E-09 63.5 4.7 33 173-205 80-114 (344)
308 2gjc_A Thiazole biosynthetic e 97.2 0.00061 2.1E-08 60.5 7.2 32 174-205 67-100 (326)
309 1ju2_A HydroxynitrIle lyase; f 97.2 0.00014 4.7E-09 70.0 3.0 35 10-45 26-60 (536)
310 2xdo_A TETX2 protein; tetracyc 97.1 0.0011 3.8E-08 61.1 8.4 35 171-205 25-59 (398)
311 2x3n_A Probable FAD-dependent 97.1 0.00086 2.9E-08 61.8 7.6 33 173-205 7-39 (399)
312 1coy_A Cholesterol oxidase; ox 97.1 0.00037 1.3E-08 66.5 4.9 36 9-44 10-45 (507)
313 3qvp_A Glucose oxidase; oxidor 97.1 0.00028 9.4E-09 68.2 3.7 35 9-43 18-53 (583)
314 1n4w_A CHOD, cholesterol oxida 97.1 0.00043 1.5E-08 66.1 4.8 37 10-46 5-41 (504)
315 3nix_A Flavoprotein/dehydrogen 97.1 0.0008 2.7E-08 62.5 6.6 33 173-205 6-38 (421)
316 3fmw_A Oxygenase; mithramycin, 97.0 0.00046 1.6E-08 66.8 4.9 33 173-205 50-82 (570)
317 4hb9_A Similarities with proba 97.0 0.0019 6.5E-08 59.6 8.2 33 173-205 2-34 (412)
318 3fim_B ARYL-alcohol oxidase; A 96.9 0.00028 9.5E-09 68.0 2.3 36 10-45 2-38 (566)
319 1y0p_A Fumarate reductase flav 96.9 0.0046 1.6E-07 59.9 10.9 34 172-205 126-159 (571)
320 3fwz_A Inner membrane protein 96.9 0.0016 5.6E-08 50.2 6.2 36 8-43 5-40 (140)
321 3i3l_A Alkylhalidase CMLS; fla 96.9 0.0032 1.1E-07 61.1 9.5 34 172-205 23-56 (591)
322 3ces_A MNMG, tRNA uridine 5-ca 96.9 0.0032 1.1E-07 61.1 9.0 33 173-205 29-61 (651)
323 2jbv_A Choline oxidase; alcoho 96.8 0.00061 2.1E-08 65.6 3.7 37 9-45 12-49 (546)
324 3rp8_A Flavoprotein monooxygen 96.8 0.00071 2.4E-08 62.6 3.8 35 171-205 22-56 (407)
325 3llv_A Exopolyphosphatase-rela 96.8 0.0018 6.1E-08 50.0 5.5 34 10-43 6-39 (141)
326 1yvv_A Amine oxidase, flavin-c 96.8 0.0014 4.6E-08 58.8 5.3 33 173-205 3-35 (336)
327 1gpe_A Protein (glucose oxidas 96.8 0.00088 3E-08 65.1 4.2 35 10-44 24-59 (587)
328 4b63_A L-ornithine N5 monooxyg 96.7 0.007 2.4E-07 57.6 10.3 35 9-43 245-281 (501)
329 2zxi_A TRNA uridine 5-carboxym 96.7 0.0019 6.4E-08 62.5 6.1 33 173-205 28-60 (637)
330 3e1t_A Halogenase; flavoprotei 96.7 0.0036 1.2E-07 59.8 7.7 33 173-205 8-40 (512)
331 1w4x_A Phenylacetone monooxyge 96.6 0.0057 2E-07 58.8 8.9 34 172-205 16-49 (542)
332 3cp8_A TRNA uridine 5-carboxym 96.6 0.004 1.4E-07 60.4 7.7 34 172-205 21-54 (641)
333 1k0i_A P-hydroxybenzoate hydro 96.6 0.0098 3.4E-07 54.5 9.9 32 174-205 4-35 (394)
334 3ihg_A RDME; flavoenzyme, anth 96.6 0.0071 2.4E-07 58.1 9.1 34 172-205 5-38 (535)
335 1qo8_A Flavocytochrome C3 fuma 96.5 0.0066 2.3E-07 58.7 8.7 33 173-205 122-154 (566)
336 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.0058 2E-07 51.0 6.6 36 169-204 28-63 (223)
337 3cgv_A Geranylgeranyl reductas 96.4 0.0041 1.4E-07 57.0 6.2 33 173-205 5-37 (397)
338 2qa2_A CABE, polyketide oxygen 96.4 0.0015 5.2E-08 62.1 3.4 35 171-205 11-45 (499)
339 3ic5_A Putative saccharopine d 96.4 0.0026 8.7E-08 47.2 3.9 35 9-43 4-39 (118)
340 3qj4_A Renalase; FAD/NAD(P)-bi 96.4 0.004 1.4E-07 56.0 5.9 33 173-205 2-37 (342)
341 2qa1_A PGAE, polyketide oxygen 96.4 0.0015 5.1E-08 62.2 3.0 35 171-205 10-44 (500)
342 2hmt_A YUAA protein; RCK, KTN, 96.4 0.0041 1.4E-07 47.9 5.1 34 10-43 6-39 (144)
343 4at0_A 3-ketosteroid-delta4-5a 96.4 0.013 4.5E-07 55.8 9.6 33 173-205 42-74 (510)
344 2g1u_A Hypothetical protein TM 96.4 0.0038 1.3E-07 49.1 4.9 34 10-43 19-52 (155)
345 1d4d_A Flavocytochrome C fumar 96.3 0.0099 3.4E-07 57.5 8.4 34 172-205 126-159 (572)
346 3atr_A Conserved archaeal prot 96.2 0.0074 2.5E-07 56.6 6.9 33 173-205 7-39 (453)
347 1id1_A Putative potassium chan 96.2 0.0074 2.5E-07 47.2 5.5 33 11-43 4-36 (153)
348 2pyx_A Tryptophan halogenase; 96.1 0.014 4.7E-07 55.9 8.3 34 172-205 7-52 (526)
349 2wdq_A Succinate dehydrogenase 96.0 0.055 1.9E-06 52.5 11.8 32 174-205 9-40 (588)
350 1lss_A TRK system potassium up 96.0 0.0062 2.1E-07 46.6 4.3 33 11-43 5-37 (140)
351 3ado_A Lambda-crystallin; L-gu 95.8 0.0079 2.7E-07 53.1 4.8 34 10-43 6-39 (319)
352 1chu_A Protein (L-aspartate ox 95.8 0.046 1.6E-06 52.4 10.5 32 173-205 9-40 (540)
353 3kkj_A Amine oxidase, flavin-c 95.7 0.0054 1.8E-07 52.9 3.2 43 347-389 288-332 (336)
354 2e5v_A L-aspartate oxidase; ar 95.7 0.022 7.6E-07 53.6 7.7 31 174-204 1-31 (472)
355 2h88_A Succinate dehydrogenase 95.6 0.1 3.4E-06 50.9 11.8 33 173-205 19-51 (621)
356 3c85_A Putative glutathione-re 95.6 0.014 5E-07 47.0 5.1 33 11-43 40-73 (183)
357 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.012 4E-07 51.9 4.8 34 10-43 15-48 (302)
358 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.017 5.8E-07 48.1 5.1 34 10-43 31-64 (223)
359 3lk7_A UDP-N-acetylmuramoylala 95.4 0.013 4.4E-07 54.9 4.8 34 10-43 9-42 (451)
360 4dgk_A Phytoene dehydrogenase; 95.4 0.0062 2.1E-07 57.9 2.6 33 173-205 2-34 (501)
361 1pzg_A LDH, lactate dehydrogen 95.4 0.015 5.3E-07 51.8 5.0 33 11-43 10-43 (331)
362 2dpo_A L-gulonate 3-dehydrogen 95.4 0.015 5.2E-07 51.5 4.8 34 10-43 6-39 (319)
363 1kf6_A Fumarate reductase flav 95.2 0.099 3.4E-06 50.8 10.5 32 174-205 7-40 (602)
364 1y56_A Hypothetical protein PH 95.2 0.03 1E-06 53.1 6.7 44 94-139 267-311 (493)
365 3l4b_C TRKA K+ channel protien 95.2 0.017 5.9E-07 48.1 4.5 32 12-43 2-33 (218)
366 2x5o_A UDP-N-acetylmuramoylala 95.2 0.015 5.3E-07 54.2 4.4 37 10-46 5-41 (439)
367 4ffl_A PYLC; amino acid, biosy 95.1 0.021 7.2E-07 51.7 5.2 37 10-46 1-37 (363)
368 3hn2_A 2-dehydropantoate 2-red 95.0 0.02 6.8E-07 50.7 4.6 33 11-43 3-35 (312)
369 3i83_A 2-dehydropantoate 2-red 95.0 0.019 6.6E-07 51.0 4.4 33 11-43 3-35 (320)
370 2p4q_A 6-phosphogluconate dehy 94.9 0.028 9.5E-07 53.1 5.5 43 1-43 1-43 (497)
371 3c24_A Putative oxidoreductase 94.9 0.027 9.1E-07 49.2 5.0 36 8-43 9-45 (286)
372 3eag_A UDP-N-acetylmuramate:L- 94.8 0.025 8.6E-07 50.4 4.6 35 9-43 3-38 (326)
373 3g17_A Similar to 2-dehydropan 94.7 0.028 9.6E-07 49.3 4.6 33 11-43 3-35 (294)
374 1kyq_A Met8P, siroheme biosynt 94.7 0.014 4.9E-07 50.2 2.6 34 10-43 13-46 (274)
375 3k96_A Glycerol-3-phosphate de 94.6 0.039 1.3E-06 49.8 5.2 33 11-43 30-62 (356)
376 3l6d_A Putative oxidoreductase 94.6 0.054 1.9E-06 47.7 6.1 35 9-43 8-42 (306)
377 4e12_A Diketoreductase; oxidor 94.6 0.03 1E-06 48.8 4.4 34 10-43 4-37 (283)
378 3k6j_A Protein F01G10.3, confi 94.5 0.039 1.3E-06 51.3 5.3 35 9-43 53-87 (460)
379 3ihm_A Styrene monooxygenase A 94.4 0.024 8.1E-07 52.7 3.6 34 172-205 22-55 (430)
380 2a9f_A Putative malic enzyme ( 94.4 0.03 1E-06 50.4 4.0 35 9-43 187-222 (398)
381 4dio_A NAD(P) transhydrogenase 94.4 0.032 1.1E-06 50.8 4.2 34 10-43 190-223 (405)
382 2vns_A Metalloreductase steap3 94.3 0.054 1.9E-06 45.0 5.2 35 9-43 27-61 (215)
383 3oz2_A Digeranylgeranylglycero 94.3 0.023 7.9E-07 51.8 3.2 32 174-205 6-37 (397)
384 3p2y_A Alanine dehydrogenase/p 94.1 0.031 1.1E-06 50.4 3.6 34 10-43 184-217 (381)
385 1z82_A Glycerol-3-phosphate de 94.1 0.041 1.4E-06 49.2 4.4 36 8-43 12-47 (335)
386 2g1u_A Hypothetical protein TM 94.1 0.052 1.8E-06 42.4 4.5 36 170-205 17-52 (155)
387 2ew2_A 2-dehydropantoate 2-red 94.1 0.04 1.4E-06 48.6 4.3 33 11-43 4-36 (316)
388 1kyq_A Met8P, siroheme biosynt 94.1 0.043 1.5E-06 47.2 4.2 36 170-205 11-46 (274)
389 3vtf_A UDP-glucose 6-dehydroge 94.1 0.047 1.6E-06 50.4 4.7 35 9-43 20-54 (444)
390 3nrn_A Uncharacterized protein 94.1 0.032 1.1E-06 51.6 3.7 33 173-205 1-33 (421)
391 3gg2_A Sugar dehydrogenase, UD 94.1 0.041 1.4E-06 51.3 4.4 33 11-43 3-35 (450)
392 3qha_A Putative oxidoreductase 94.0 0.043 1.5E-06 48.1 4.2 35 10-44 15-49 (296)
393 1jw9_B Molybdopterin biosynthe 94.0 0.043 1.5E-06 46.8 4.0 33 11-43 32-65 (249)
394 1vl6_A Malate oxidoreductase; 93.9 0.053 1.8E-06 48.8 4.6 34 9-42 191-225 (388)
395 2raf_A Putative dinucleotide-b 93.9 0.053 1.8E-06 44.8 4.4 36 9-44 18-53 (209)
396 3ka7_A Oxidoreductase; structu 93.9 0.034 1.2E-06 51.4 3.5 32 174-205 2-33 (425)
397 3doj_A AT3G25530, dehydrogenas 93.9 0.056 1.9E-06 47.7 4.7 35 9-43 20-54 (310)
398 1lld_A L-lactate dehydrogenase 93.8 0.049 1.7E-06 48.3 4.4 33 11-43 8-42 (319)
399 3ghy_A Ketopantoate reductase 93.8 0.068 2.3E-06 47.7 5.2 32 11-42 4-35 (335)
400 4dll_A 2-hydroxy-3-oxopropiona 93.8 0.049 1.7E-06 48.4 4.2 34 10-43 31-64 (320)
401 2oln_A NIKD protein; flavoprot 93.8 0.042 1.5E-06 50.3 4.0 33 173-205 5-37 (397)
402 3g5s_A Methylenetetrahydrofola 93.8 0.038 1.3E-06 50.1 3.4 43 347-389 321-366 (443)
403 3ius_A Uncharacterized conserv 93.8 0.052 1.8E-06 47.1 4.3 35 9-43 4-38 (286)
404 3pdu_A 3-hydroxyisobutyrate de 93.8 0.057 2E-06 47.0 4.5 33 11-43 2-34 (287)
405 2hjr_A Malate dehydrogenase; m 93.8 0.059 2E-06 48.0 4.6 34 10-43 14-48 (328)
406 3oj0_A Glutr, glutamyl-tRNA re 93.7 0.021 7.3E-07 44.0 1.5 34 10-43 21-54 (144)
407 3i6i_A Putative leucoanthocyan 93.7 0.074 2.5E-06 47.7 5.3 34 10-43 10-44 (346)
408 4a7p_A UDP-glucose dehydrogena 93.7 0.058 2E-06 50.1 4.7 37 9-45 7-43 (446)
409 3hwr_A 2-dehydropantoate 2-red 93.7 0.14 4.7E-06 45.4 6.9 35 170-205 17-51 (318)
410 1id1_A Putative potassium chan 93.6 0.065 2.2E-06 41.7 4.2 35 171-205 2-36 (153)
411 3dme_A Conserved exported prot 93.6 0.039 1.3E-06 49.7 3.4 33 173-205 5-37 (369)
412 1ryi_A Glycine oxidase; flavop 93.6 0.039 1.3E-06 50.1 3.4 34 172-205 17-50 (382)
413 1ks9_A KPA reductase;, 2-dehyd 93.6 0.055 1.9E-06 47.1 4.2 33 12-44 2-34 (291)
414 3dtt_A NADP oxidoreductase; st 93.6 0.067 2.3E-06 45.4 4.6 35 9-43 18-52 (245)
415 1c0p_A D-amino acid oxidase; a 93.5 0.061 2.1E-06 48.5 4.5 34 172-205 6-39 (363)
416 3fwz_A Inner membrane protein 93.5 0.069 2.4E-06 40.8 4.2 35 171-205 6-40 (140)
417 3g0o_A 3-hydroxyisobutyrate de 93.5 0.063 2.1E-06 47.2 4.4 34 10-43 7-40 (303)
418 2uzz_A N-methyl-L-tryptophan o 93.5 0.035 1.2E-06 50.3 2.8 32 174-205 4-35 (372)
419 1ur5_A Malate dehydrogenase; o 93.5 0.065 2.2E-06 47.3 4.5 33 11-43 3-36 (309)
420 2i6t_A Ubiquitin-conjugating e 93.5 0.06 2.1E-06 47.3 4.2 35 9-43 13-49 (303)
421 3tl2_A Malate dehydrogenase; c 93.5 0.071 2.4E-06 47.1 4.6 33 10-42 8-41 (315)
422 2ewd_A Lactate dehydrogenase,; 93.4 0.071 2.4E-06 47.2 4.7 33 11-43 5-38 (317)
423 2y0c_A BCEC, UDP-glucose dehyd 93.4 0.065 2.2E-06 50.4 4.6 34 10-43 8-41 (478)
424 2gf3_A MSOX, monomeric sarcosi 93.4 0.045 1.5E-06 49.9 3.4 33 173-205 4-36 (389)
425 3lk7_A UDP-N-acetylmuramoylala 93.4 0.11 3.7E-06 48.6 6.0 36 170-205 7-42 (451)
426 3l9w_A Glutathione-regulated p 93.4 0.094 3.2E-06 48.2 5.5 33 11-43 5-37 (413)
427 2o3j_A UDP-glucose 6-dehydroge 93.4 0.064 2.2E-06 50.5 4.4 34 10-43 9-44 (481)
428 3i83_A 2-dehydropantoate 2-red 93.3 0.12 4.1E-06 45.8 6.0 33 173-205 3-35 (320)
429 3ego_A Probable 2-dehydropanto 93.3 0.065 2.2E-06 47.2 4.2 32 11-43 3-34 (307)
430 1zej_A HBD-9, 3-hydroxyacyl-CO 93.3 0.068 2.3E-06 46.6 4.2 35 8-43 10-44 (293)
431 3vps_A TUNA, NAD-dependent epi 93.3 0.087 3E-06 46.4 5.0 36 9-44 6-42 (321)
432 2iid_A L-amino-acid oxidase; f 93.3 0.045 1.5E-06 51.8 3.3 35 171-205 32-66 (498)
433 2e1m_A L-glutamate oxidase; L- 93.3 0.056 1.9E-06 49.0 3.7 34 171-204 43-76 (376)
434 3nks_A Protoporphyrinogen oxid 93.3 0.049 1.7E-06 51.2 3.5 33 173-205 3-37 (477)
435 3g79_A NDP-N-acetyl-D-galactos 93.2 0.071 2.4E-06 49.9 4.3 35 10-44 18-54 (478)
436 3phh_A Shikimate dehydrogenase 93.2 0.081 2.8E-06 45.4 4.4 34 10-43 118-151 (269)
437 1y56_B Sarcosine oxidase; dehy 93.2 0.047 1.6E-06 49.6 3.1 33 173-205 6-38 (382)
438 3c4a_A Probable tryptophan hyd 93.1 0.049 1.7E-06 49.6 3.2 33 173-205 1-35 (381)
439 2qyt_A 2-dehydropantoate 2-red 93.1 0.049 1.7E-06 48.1 3.1 31 11-41 9-45 (317)
440 3k7m_X 6-hydroxy-L-nicotine ox 93.1 0.049 1.7E-06 50.5 3.2 32 174-205 3-34 (431)
441 1evy_A Glycerol-3-phosphate de 93.1 0.052 1.8E-06 49.2 3.3 32 12-43 17-48 (366)
442 3c96_A Flavin-containing monoo 93.1 0.063 2.2E-06 49.4 3.9 33 173-205 5-38 (410)
443 1pjc_A Protein (L-alanine dehy 93.1 0.079 2.7E-06 47.9 4.4 33 11-43 168-200 (361)
444 2b9w_A Putative aminooxidase; 93.0 0.058 2E-06 49.8 3.6 35 171-205 5-40 (424)
445 2v6b_A L-LDH, L-lactate dehydr 93.0 0.074 2.5E-06 46.8 4.1 32 12-43 2-35 (304)
446 3hwr_A 2-dehydropantoate 2-red 93.0 0.079 2.7E-06 46.9 4.3 34 9-43 18-51 (318)
447 1zcj_A Peroxisomal bifunctiona 93.0 0.084 2.9E-06 49.4 4.6 34 10-43 37-70 (463)
448 4g65_A TRK system potassium up 92.9 0.039 1.3E-06 51.7 2.2 32 12-43 5-36 (461)
449 3ktd_A Prephenate dehydrogenas 92.9 0.13 4.3E-06 46.0 5.5 34 10-43 8-41 (341)
450 1x13_A NAD(P) transhydrogenase 92.9 0.081 2.8E-06 48.5 4.3 34 10-43 172-205 (401)
451 3gpi_A NAD-dependent epimerase 92.9 0.14 4.8E-06 44.4 5.7 33 11-43 4-36 (286)
452 2pv7_A T-protein [includes: ch 92.9 0.12 4.1E-06 45.3 5.2 35 9-43 20-55 (298)
453 2jae_A L-amino acid oxidase; o 92.9 0.069 2.4E-06 50.4 4.0 35 171-205 10-44 (489)
454 4ezb_A Uncharacterized conserv 92.9 0.073 2.5E-06 47.1 3.9 35 9-43 23-58 (317)
455 1bg6_A N-(1-D-carboxylethyl)-L 92.9 0.083 2.9E-06 47.6 4.3 33 11-43 5-37 (359)
456 3nyc_A D-arginine dehydrogenas 92.9 0.054 1.9E-06 49.1 3.1 34 171-205 8-41 (381)
457 4gde_A UDP-galactopyranose mut 92.9 0.059 2E-06 51.1 3.5 33 173-205 11-44 (513)
458 3rui_A Ubiquitin-like modifier 92.9 0.088 3E-06 46.7 4.3 34 10-43 34-68 (340)
459 3vku_A L-LDH, L-lactate dehydr 92.9 0.093 3.2E-06 46.5 4.5 42 1-43 1-44 (326)
460 1nyt_A Shikimate 5-dehydrogena 92.8 0.089 3E-06 45.4 4.2 34 10-43 119-152 (271)
461 4huj_A Uncharacterized protein 92.8 0.066 2.2E-06 44.6 3.3 34 10-43 23-57 (220)
462 2h78_A Hibadh, 3-hydroxyisobut 92.8 0.078 2.7E-06 46.6 3.9 34 10-43 3-36 (302)
463 3qsg_A NAD-binding phosphogluc 92.8 0.08 2.7E-06 46.8 4.0 33 10-42 24-57 (312)
464 3pid_A UDP-glucose 6-dehydroge 92.7 0.085 2.9E-06 48.6 4.1 33 10-43 36-68 (432)
465 1yj8_A Glycerol-3-phosphate de 92.7 0.088 3E-06 47.9 4.3 35 10-44 21-62 (375)
466 1t2d_A LDH-P, L-lactate dehydr 92.7 0.1 3.4E-06 46.3 4.5 33 11-43 5-38 (322)
467 1l7d_A Nicotinamide nucleotide 92.7 0.093 3.2E-06 47.9 4.4 34 10-43 172-205 (384)
468 2bi7_A UDP-galactopyranose mut 92.7 0.088 3E-06 48.0 4.2 33 173-205 4-36 (384)
469 3r6d_A NAD-dependent epimerase 92.7 0.13 4.5E-06 42.6 5.0 35 9-43 4-40 (221)
470 3gt0_A Pyrroline-5-carboxylate 92.7 0.13 4.5E-06 43.6 5.1 33 11-43 3-39 (247)
471 3llv_A Exopolyphosphatase-rela 92.7 0.081 2.8E-06 40.4 3.4 34 172-205 6-39 (141)
472 2uyy_A N-PAC protein; long-cha 92.6 0.16 5.6E-06 44.8 5.8 33 11-43 31-63 (316)
473 3dje_A Fructosyl amine: oxygen 92.6 0.076 2.6E-06 49.3 3.8 34 172-205 6-40 (438)
474 3e8x_A Putative NAD-dependent 92.6 0.11 3.8E-06 43.5 4.5 34 10-43 21-55 (236)
475 3mog_A Probable 3-hydroxybutyr 92.6 0.13 4.5E-06 48.3 5.3 34 10-43 5-38 (483)
476 2r6j_A Eugenol synthase 1; phe 92.6 0.14 4.8E-06 45.2 5.3 35 9-43 10-45 (318)
477 3pef_A 6-phosphogluconate dehy 92.6 0.1 3.5E-06 45.4 4.4 33 11-43 2-34 (287)
478 4id9_A Short-chain dehydrogena 92.5 0.14 4.7E-06 45.8 5.2 35 9-43 18-53 (347)
479 3don_A Shikimate dehydrogenase 92.5 0.12 4E-06 44.7 4.5 34 10-43 117-151 (277)
480 3h8v_A Ubiquitin-like modifier 92.5 0.099 3.4E-06 45.4 4.0 34 10-43 36-70 (292)
481 2gag_B Heterotetrameric sarcos 92.5 0.062 2.1E-06 49.2 3.0 34 172-205 21-56 (405)
482 3g3e_A D-amino-acid oxidase; F 92.5 0.067 2.3E-06 48.0 3.1 32 174-205 2-39 (351)
483 2vvm_A Monoamine oxidase N; FA 92.5 0.18 6.1E-06 47.6 6.3 54 84-139 255-310 (495)
484 1hyh_A L-hicdh, L-2-hydroxyiso 92.5 0.097 3.3E-06 46.2 4.1 33 11-43 2-36 (309)
485 3q2o_A Phosphoribosylaminoimid 92.5 0.14 4.8E-06 46.7 5.3 35 10-44 14-48 (389)
486 3ps9_A TRNA 5-methylaminomethy 92.5 0.11 3.7E-06 51.3 4.8 34 172-205 272-305 (676)
487 4gbj_A 6-phosphogluconate dehy 92.4 0.074 2.5E-06 46.6 3.2 36 9-44 4-39 (297)
488 1lss_A TRK system potassium up 92.4 0.1 3.5E-06 39.6 3.7 34 172-205 4-37 (140)
489 3eag_A UDP-N-acetylmuramate:L- 92.4 0.32 1.1E-05 43.2 7.3 35 171-205 3-38 (326)
490 3orq_A N5-carboxyaminoimidazol 92.3 0.17 5.7E-06 46.0 5.6 36 9-44 11-46 (377)
491 3ojo_A CAP5O; rossmann fold, c 92.3 0.091 3.1E-06 48.5 3.8 35 9-43 10-44 (431)
492 2bcg_G Secretory pathway GDP d 92.3 0.071 2.4E-06 49.8 3.1 33 173-205 12-44 (453)
493 1ldn_A L-lactate dehydrogenase 92.3 0.13 4.5E-06 45.4 4.7 34 10-43 6-41 (316)
494 1zud_1 Adenylyltransferase THI 92.2 0.11 3.7E-06 44.3 3.9 34 10-43 28-62 (251)
495 1pjq_A CYSG, siroheme synthase 92.2 0.1 3.5E-06 48.7 4.1 34 10-43 12-45 (457)
496 1s3e_A Amine oxidase [flavin-c 92.2 0.073 2.5E-06 50.7 3.1 34 172-205 4-37 (520)
497 1mv8_A GMD, GDP-mannose 6-dehy 92.2 0.09 3.1E-06 48.9 3.6 32 12-43 2-33 (436)
498 3pqe_A L-LDH, L-lactate dehydr 92.1 0.13 4.6E-06 45.5 4.5 33 11-43 6-40 (326)
499 3u62_A Shikimate dehydrogenase 92.1 0.18 6.2E-06 42.9 5.2 32 12-43 110-142 (253)
500 2eez_A Alanine dehydrogenase; 92.1 0.12 4.2E-06 46.7 4.4 34 10-43 166-199 (369)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.5e-43 Score=327.18 Aligned_cols=342 Identities=21% Similarity=0.354 Sum_probs=273.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
++||+|||||++|+++|..|+++|++|+|||+.+.+||.|.. .|+.+.+..+...+.++.++.+.....++.+.++.++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 379999999999999999999999999999999999999985 4788888778877778777777666778889999999
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCc
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGV 168 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 168 (395)
+.+++++++++++++++|++++..+ +.|. |++++.++.||+||+|||.++.+..|.+||...+.+...+...+.+..
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 159 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPA 159 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSG
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChh
Confidence 9999999999999999999999887 7788 888878999999999999877888899999988888888998888888
Q ss_pred CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccc
Q 039923 169 EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGD 248 (395)
Q Consensus 169 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
...+++|+|||+|.+|+|+|..|++.+ +|+++.|++.+++|....+. .+..++...+ ..
T Consensus 160 ~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~---~~~~~~~~~~----~~------------- 218 (357)
T 4a9w_A 160 PFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGR---VLFERATERW----KA------------- 218 (357)
T ss_dssp GGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTH---HHHTC------------------------
T ss_pred hcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCc---cHHHHHHHHH----hc-------------
Confidence 888999999999999999999999998 69999998546767654311 1111111100 00
Q ss_pred hhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecCccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCccc
Q 039923 249 TKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPGIQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWL 328 (395)
Q Consensus 249 ~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~ 328 (395)
...... ..........+.....+.+.++.+.+.....+++++..++.+.+|+++++|.||+|||++|+. .++
T Consensus 219 --~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~-~~l 290 (357)
T 4a9w_A 219 --QQEGRE-----PDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRPAL-SHL 290 (357)
T ss_dssp ----------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCCBCCCC-GGG
T ss_pred --cccccC-----CCcccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCCcCCCC-ccc
Confidence 000000 000000112245556677777888877777799999999999999999999999999999997 677
Q ss_pred cccccccccCCCCCCCCCCC--CCCCCCCeEEEE--ecccc-cc---cchhhHHHHHHHHHhhhcc
Q 039923 329 KEASLFNQKNNNNPQDSYPK--NWKGKNGVYSVG--FARQG-LL---GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 329 ~~~~l~~~~~~g~~~~~~~~--~~~~~~~iya~G--d~~~~-~~---~a~~~g~~~a~~i~~~~~~ 386 (395)
+..++. +++|++.+| ++ ++++.|+||++| ||+.. +. .|..||+.+|++|.+.+++
T Consensus 291 ~~~gl~--~~~G~i~vd-~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 291 KGLDLV--TPQGQVEVD-GSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp TTTTCB--CTTSCBCBC-TTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred Cccccc--CCCCCcccc-CCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 887875 589999999 45 789999999999 66642 22 8999999999999999986
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=4.1e-43 Score=333.84 Aligned_cols=302 Identities=22% Similarity=0.397 Sum_probs=245.0
Q ss_pred CCCeEEECCChHHHHHHHHHHH---cCCC---EEEEecCCCcccccccC---------------CcCceeeecCCccccC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE---RGVP---SLIIEKESCLASLWKLK---------------IYDHLQLHLPKQFCQL 68 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~---~g~~---v~lie~~~~~~g~~~~~---------------~~~~~~~~~~~~~~~~ 68 (395)
.+||+|||||++|+++|..|++ .|++ |+|||+.+.+||+|... .|..++.+.+...+.+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 3699999999999999999999 9999 99999999999999753 2444555555555555
Q ss_pred CCCCCCC----CCCCCCCHHHHHHHHHHHHHHcCCc--cccCceEEEEEEcCCCCcEEEEEcc------EEEEeCEEEEe
Q 039923 69 PYVPFPR----EYPAYPSGQQFITYMEAYANHFEIE--PLLGQEVQWAKYDAAMGHWRVKTHE------YEFMCRWLIVA 136 (395)
Q Consensus 69 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~V~~v~~~~~~~~~~v~~~~------~~~~~d~lVlA 136 (395)
+.++++. +.+.+++..++.+|++.+++++++. ++++++|+.++..++.+.|+|++.+ .++.||+||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 5544332 2256778999999999999999998 8889999999988754588888754 68999999999
Q ss_pred eCCCCCCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCC
Q 039923 137 TGENEVPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGR 216 (395)
Q Consensus 137 tG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~ 216 (395)
||.++.|+.|.+||.+.+.+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.|++|++++|++ .+++...
T Consensus 162 tG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~-~~~~~~~--- 237 (464)
T 2xve_A 162 TGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT-APMGYKW--- 237 (464)
T ss_dssp CCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS-CCCCCCC---
T ss_pred CCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC-CCCCCCC---
Confidence 999889999999999888888899998888777789999999999999999999999999999999987 3322100
Q ss_pred ChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecCccEE
Q 039923 217 SSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPGIQKF 296 (395)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~ 296 (395)
..+|.++..|+++
T Consensus 238 -------------------------------------------------------------------~~~V~~~~~V~~i 250 (464)
T 2xve_A 238 -------------------------------------------------------------------PENWDERPNLVRV 250 (464)
T ss_dssp -------------------------------------------------------------------CTTEEECSCEEEE
T ss_pred -------------------------------------------------------------------CCceEEcCCeEEE
Confidence 1256666668888
Q ss_pred ecCeEEEeCCcEecCcEEEEcCCCCCCCCccccc-cccccccCCCCCCCC-CCCCCCCCCCeEEEEecccccc--cchhh
Q 039923 297 TAKGAEFVNRTVKEFDSIILATGYRSNVSSWLKE-ASLFNQKNNNNPQDS-YPKNWKGKNGVYSVGFARQGLL--GISMD 372 (395)
Q Consensus 297 ~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~-~~l~~~~~~g~~~~~-~~~~~~~~~~iya~Gd~~~~~~--~a~~~ 372 (395)
+++++.+.||+++++|.||+|||++|+. .++.+ .++. .++++++... ...+.++.|+||++||+..... .|..|
T Consensus 251 ~~~~V~~~dG~~i~~D~Vi~atG~~p~~-~~l~~~~gl~-~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~q 328 (464)
T 2xve_A 251 DTENAYFADGSSEKVDAIILCTGYIHHF-PFLNDDLRLV-TNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQ 328 (464)
T ss_dssp CSSEEEETTSCEEECSEEEECCCBCCCC-TTBCTTTCCC-CCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHH
T ss_pred eCCEEEECCCCEEeCCEEEECCCCCCCC-CCcCcccccc-cCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHH
Confidence 8889999999999999999999999998 45544 6777 5555565221 1234588999999999987654 88999
Q ss_pred HHHHHHHHHhhh
Q 039923 373 AHKVADDIASQW 384 (395)
Q Consensus 373 g~~~a~~i~~~~ 384 (395)
|+++|++|.+..
T Consensus 329 a~~~a~~l~G~~ 340 (464)
T 2xve_A 329 AWYARDVIMGRL 340 (464)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHcCCC
Confidence 999999998875
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=4.8e-43 Score=337.92 Aligned_cols=366 Identities=19% Similarity=0.283 Sum_probs=276.4
Q ss_pred CCCeEEECCChHHHHHHHHHH-HcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCC----CCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLK-ERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVP----FPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~-~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|+ +.|++|+|||+.+.+||+|....|+++.++.+...+.+.+.+ ...+...++.+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 889999999999999999999999999998888777665431 112334567889
Q ss_pred HHHHHHHHHHHHcCC--ccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeec
Q 039923 85 QFITYMEAYANHFEI--EPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHT 161 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~--~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~ 161 (395)
++.+|+.+.++++++ .++++++|++++++++.+.|+|++++ +++.||+||+|||.++.|..|.+||++.|.+..+|+
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~ 167 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHT 167 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEe
Confidence 999999999999998 68899999999998866789999887 679999999999998899999999999998999999
Q ss_pred CCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChh---------
Q 039923 162 STYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVD--------- 232 (395)
Q Consensus 162 ~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------- 232 (395)
..+.+.....+++|+|||+|.+|+|+|..|++.+++||+++|++.+++|..+...+.... ..+...+|..
T Consensus 168 ~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~ 246 (540)
T 3gwf_A 168 AAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQI-AEIKADYDRIWERAKNSAV 246 (540)
T ss_dssp GGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHH-HHHHHTHHHHHHHHHTSSS
T ss_pred ecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHH-HHHHhccHHHHHHHHhccc
Confidence 999887788899999999999999999999999999999999997788876553322110 0111000000
Q ss_pred -------------------------------------------HH--------HHHHHHhhhhhccchhhcCCCCCCCCC
Q 039923 233 -------------------------------------------VV--------DRFLLFCSRLVLGDTKQIGIQRPKMGP 261 (395)
Q Consensus 233 -------------------------------------------~~--------~~~~~~~~~~~~~~~~~~gi~~~~~~~ 261 (395)
+. ..++.........+.+.. ..+.|
T Consensus 247 g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~----~~l~P 322 (540)
T 3gwf_A 247 AFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETA----RKLMP 322 (540)
T ss_dssp CSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHH----HHHCC
T ss_pred cccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHH----HhCCC
Confidence 00 000000000111111111 01122
Q ss_pred CcccCCCCCCcccChhhHhhhhcCCeEEe---cC-ccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCcccccccccccc
Q 039923 262 LQWKNSVGKTPVLDDGAFAKIKSGEIKVV---PG-IQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQK 337 (395)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~ 337 (395)
. ...+++++.+.++++.+++++|+++ .. |+++++++|.+.||+++++|+||+||||+++. .++...++..
T Consensus 323 ~---~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~-~~~~~~~i~g-- 396 (540)
T 3gwf_A 323 K---GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD-GNYRRIEIRG-- 396 (540)
T ss_dssp C---SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS-HHHHTSEEEC--
T ss_pred C---CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc-cCcCcceEEC--
Confidence 2 6789999999999999999999999 34 99999999999999999999999999999986 3444443321
Q ss_pred CCCCCC---------CCCCCCCCCCCCeEEE-Eecccccc---cchhhHHHHHHHHHhhhcc
Q 039923 338 NNNNPQ---------DSYPKNWKGKNGVYSV-GFARQGLL---GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 338 ~~g~~~---------~~~~~~~~~~~~iya~-Gd~~~~~~---~a~~~g~~~a~~i~~~~~~ 386 (395)
.+|..+ .-......+.||+|++ |+.+...+ .+..|++.+++.|....++
T Consensus 397 ~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~~~~~ 458 (540)
T 3gwf_A 397 RDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGYAERN 458 (540)
T ss_dssp GGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHHHHHC
Confidence 233222 1111233589999999 88654322 7778888888877655443
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=2.7e-42 Score=333.06 Aligned_cols=380 Identities=19% Similarity=0.228 Sum_probs=268.9
Q ss_pred CCCCCCCCCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCC----CCC
Q 039923 1 MSSKAKRFWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPF----PRE 76 (395)
Q Consensus 1 m~~~~~~~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 76 (395)
|+..++ ...+||+|||||++|+++|.+|.+.|++|+|||+.+.+||+|..+.|++++++.+...+.+.+.+. ..+
T Consensus 1 M~~~~~-~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~ 79 (545)
T 3uox_A 1 MSNRAK-SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEW 79 (545)
T ss_dssp -----C-CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCC
T ss_pred CCCCCC-CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCc
Confidence 544332 335799999999999999999999999999999999999999999999999888877665543221 123
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCC--ccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCC
Q 039923 77 YPAYPSGQQFITYMEAYANHFEI--EPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISE 153 (395)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~ 153 (395)
...++...++.+|+++.++++++ .++++++|++++++++.+.|+|++++ +++.||+||+|||.++.|..|.+||++.
T Consensus 80 ~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 80 SENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp SBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGG
T ss_pred cccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccc
Confidence 34577899999999999999998 68899999999998766789999987 7899999999999888999999999999
Q ss_pred CcccEeecCCCCCC-------cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHH
Q 039923 154 FRGRLLHTSTYKNG-------VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLL 226 (395)
Q Consensus 154 ~~~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 226 (395)
|.+..+|+..+... ....+++|+|||+|.+|+|+|..|++.+++||++.|++.+++|..+...+.... ..+.
T Consensus 160 f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~-~~l~ 238 (545)
T 3uox_A 160 FKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKM-DSLR 238 (545)
T ss_dssp CCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHH-HHHH
T ss_pred cCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHH-HHHH
Confidence 98889999988765 667899999999999999999999999999999999997788876543221110 1111
Q ss_pred hhCChhH--------------------------HHH----HH---------------------HHhhhhhccchhhcCCC
Q 039923 227 KWFPVDV--------------------------VDR----FL---------------------LFCSRLVLGDTKQIGIQ 255 (395)
Q Consensus 227 ~~~~~~~--------------------------~~~----~~---------------------~~~~~~~~~~~~~~gi~ 255 (395)
..+|... +.. .+ ...........-+..+.
T Consensus 239 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (545)
T 3uox_A 239 NRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVK 318 (545)
T ss_dssp HTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCS
T ss_pred hhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcC
Confidence 0000000 000 00 00000000000011111
Q ss_pred CCCCCCCc---ccCCCCCCcccChhhHhhhhcCCeEEe---cC-ccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCccc
Q 039923 256 RPKMGPLQ---WKNSVGKTPVLDDGAFAKIKSGEIKVV---PG-IQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWL 328 (395)
Q Consensus 256 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~ 328 (395)
.+...... -....+++++.+.++++.+++++|+++ .. |+++++++|.+.|| ++++|+||+||||++.+ .++
T Consensus 319 d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~-~~~ 396 (545)
T 3uox_A 319 DPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVT-GSL 396 (545)
T ss_dssp CHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSS-CSC
T ss_pred CHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCcccccc-ccC
Confidence 11111111 134578999999999999999999998 34 99999999999999 99999999999999875 333
Q ss_pred cccccccccCCCCCCCC-----C----CCCCCCCCCeEEEE-eccc--ccc---cchhhHHHHHHHHHhhhcc
Q 039923 329 KEASLFNQKNNNNPQDS-----Y----PKNWKGKNGVYSVG-FARQ--GLL---GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 329 ~~~~l~~~~~~g~~~~~-----~----~~~~~~~~~iya~G-d~~~--~~~---~a~~~g~~~a~~i~~~~~~ 386 (395)
....+. ..+|..+.+ . .....+.||+|++. ...+ ..+ .+..|++.+++.|....++
T Consensus 397 ~~~~i~--g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 467 (545)
T 3uox_A 397 DRIDIR--GKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDN 467 (545)
T ss_dssp TTSEEE--CGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEE--CCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 344332 234433211 0 11235889999984 3322 111 6778888888877655443
No 5
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=1.4e-41 Score=328.35 Aligned_cols=371 Identities=20% Similarity=0.288 Sum_probs=271.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCC----CCCCCCCCCCHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVP----FPREYPAYPSGQQ 85 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 85 (395)
.+||+|||||++|+++|.+|++.|++|+|||+.+.+||+|..+.|++++++.+...+.+.+.+ ...+...++.+.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 479999999999999999999999999999999999999999999999999888887766431 1233356788999
Q ss_pred HHHHHHHHHHHcCC--ccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecC
Q 039923 86 FITYMEAYANHFEI--EPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTS 162 (395)
Q Consensus 86 ~~~~~~~~~~~~~~--~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~ 162 (395)
+.+|+++.++++++ .++++++|++++++++...|+|++++ +++.||+||+|||.++.|..|.+||++.+.+..+|+.
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~ 180 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTA 180 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEGG
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEec
Confidence 99999999999998 68899999999998866789999887 6799999999999888999999999999988999999
Q ss_pred CCC-CCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhH--------
Q 039923 163 TYK-NGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDV-------- 233 (395)
Q Consensus 163 ~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 233 (395)
.+. +.....+++|+|||+|.+|+|+|..|++.+++|++++|++.+++|..+...+.... ..+...+|...
T Consensus 181 ~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~-~~l~~~~~~~~~~~r~~~~ 259 (549)
T 4ap3_A 181 RWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATR-AEQKANYAERRRLSRESGG 259 (549)
T ss_dssp GCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHH-HHHHHTHHHHHHHHHHSSS
T ss_pred cccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHH-HHHHhccHHHHHHHHhhcc
Confidence 988 56777899999999999999999999999999999999997788876653221110 00100000000
Q ss_pred ------------------HHHH----H--------------------HHhhh-hhccchhhcCCCCCCCCCC--cc-cCC
Q 039923 234 ------------------VDRF----L--------------------LFCSR-LVLGDTKQIGIQRPKMGPL--QW-KNS 267 (395)
Q Consensus 234 ------------------~~~~----~--------------------~~~~~-~~~~~~~~~gi~~~~~~~~--~~-~~~ 267 (395)
+..+ + ..... .....++ ..+..+..... .. ...
T Consensus 260 ~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~d~~~~~~l~P~~~~~ 338 (549)
T 4ap3_A 260 GSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIR-AVVDDPAVAELLTPKDHAI 338 (549)
T ss_dssp SSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHH-HHCSCHHHHHHHSCSSCCB
T ss_pred ccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHH-HHcCCHHHHHhCCCCCCCC
Confidence 0000 0 00000 0000000 00111110000 11 446
Q ss_pred CCCCcccChhhHhhhhcCCeEEe---cC-ccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCccccccccccccCCCCCC
Q 039923 268 VGKTPVLDDGAFAKIKSGEIKVV---PG-IQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQ 343 (395)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~ 343 (395)
.+++++.+.++++.+++++|+++ .. |+++++++|.+.+| ++++|+||+||||+++. .++...++. ..+|..+
T Consensus 339 ~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~-~~~~~~~i~--g~~G~~l 414 (549)
T 4ap3_A 339 GAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMT-GSLDKLEIV--GRGGRTL 414 (549)
T ss_dssp TTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESS-TTGGGSEEE--CGGGCBH
T ss_pred CccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccc-cccCceeEE--CCCCcCH
Confidence 88999999999999999999998 44 99999999999999 99999999999999985 344444332 1333222
Q ss_pred C-----C----CCCCCCCCCCeEEE-Eecccc-----cccchhhHHHHHHHHHhhhcc
Q 039923 344 D-----S----YPKNWKGKNGVYSV-GFARQG-----LLGISMDAHKVADDIASQWNS 386 (395)
Q Consensus 344 ~-----~----~~~~~~~~~~iya~-Gd~~~~-----~~~a~~~g~~~a~~i~~~~~~ 386 (395)
. . ......+.||+|++ |...+. +..+..|++.+++.|....++
T Consensus 415 ~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 472 (549)
T 4ap3_A 415 KETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDAR 472 (549)
T ss_dssp HHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHHHHC
Confidence 1 1 01122588999997 654331 117778888888877655443
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=1.5e-40 Score=322.33 Aligned_cols=373 Identities=22% Similarity=0.310 Sum_probs=270.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCC----CCCCCCCCCHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPF----PREYPAYPSGQQ 85 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 85 (395)
.+||+|||||++|+++|.+|++.|++|+|||+.+.+||+|....|+++.++.+...+.+.+.+. ..+...++.+.+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 4799999999999999999999999999999999999999988899988877766555442210 112235678899
Q ss_pred HHHHHHHHHHHcCC--ccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecC
Q 039923 86 FITYMEAYANHFEI--EPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTS 162 (395)
Q Consensus 86 ~~~~~~~~~~~~~~--~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~ 162 (395)
+.+|++.+++++++ .++++++|++++++++.+.|+|++++ +++.||+||+|||.++.|..|.+||++.+.+..+|+.
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs~ 175 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTG 175 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEGG
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEECC
Confidence 99999999999874 57889999999998765789999876 6899999999999988999999999988888889998
Q ss_pred CCC-CCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhH--------
Q 039923 163 TYK-NGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDV-------- 233 (395)
Q Consensus 163 ~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 233 (395)
.+. +.....+++|+|||+|.+|+|++..+++.+.+|+++.|++.+++|+....... .....+...+|...
T Consensus 176 ~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~-~~~~~~~~~~p~l~~~~~~~~~ 254 (542)
T 1w4x_A 176 NWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDP-EFLADLKKRYAEFREESRNTPG 254 (542)
T ss_dssp GCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCH-HHHHHHHTTHHHHHHHHHTSSS
T ss_pred CCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCH-HHHHHHHhhCHHHHHHHHhhcc
Confidence 887 44567899999999999999999999999999999999996667765432211 11111111111000
Q ss_pred ------------------HHHHHHHh------------------------hhhhccchhhcCCCCCC----CCCCcccCC
Q 039923 234 ------------------VDRFLLFC------------------------SRLVLGDTKQIGIQRPK----MGPLQWKNS 267 (395)
Q Consensus 234 ------------------~~~~~~~~------------------------~~~~~~~~~~~gi~~~~----~~~~~~~~~ 267 (395)
...+.... ...+....-+..+..+. +.|. -+..
T Consensus 255 G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~-~~~~ 333 (542)
T 1w4x_A 255 GTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPK-GYPF 333 (542)
T ss_dssp SSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCC-SSCS
T ss_pred ccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCC-CCCc
Confidence 00000000 00000000000011110 0110 2456
Q ss_pred CCCCcccChhhHhhhhcCCeEEe---c-CccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCccccccccccccCCCCCC
Q 039923 268 VGKTPVLDDGAFAKIKSGEIKVV---P-GIQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQ 343 (395)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~v~~~---~-~v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~ 343 (395)
.+++++.+.++++.+++++|+++ . .|+++++++|.+.| +++++|.||+|||++++. .++...++. ..+|..+
T Consensus 334 ~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~-~~~~~~~i~--g~~G~~l 409 (542)
T 1w4x_A 334 GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALT-GALFKIDIR--GVGNVAL 409 (542)
T ss_dssp SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTT-HHHHTSEEE--CGGGCBH
T ss_pred cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccc-cCcCceeeE--CCCCCCH
Confidence 88999999999999999999997 3 39999999999999 899999999999999975 344444442 2444443
Q ss_pred CC------CC---CCCCCCCCeEEE-Eeccc--ccc---cchhhHHHHHHHHHhhhcccc
Q 039923 344 DS------YP---KNWKGKNGVYSV-GFARQ--GLL---GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 344 ~~------~~---~~~~~~~~iya~-Gd~~~--~~~---~a~~~g~~~a~~i~~~~~~~~ 388 (395)
.+ .. ....+.||+|++ |+.+. ..+ .+..|++.+|+.|....++..
T Consensus 410 ~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~~~ 469 (542)
T 1w4x_A 410 KEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGL 469 (542)
T ss_dssp HHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 32 01 122478999998 99853 222 788999999999988765443
No 7
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=2.8e-39 Score=306.98 Aligned_cols=296 Identities=22% Similarity=0.305 Sum_probs=232.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCcccccccCCc---------------------------------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV--PSLIIEKESCLASLWKLKIY--------------------------------- 54 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~~~~g~~~~~~~--------------------------------- 54 (395)
.+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.....
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5899999999999999999999999 99999999999998876421
Q ss_pred CceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc----E---E
Q 039923 55 DHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE----Y---E 127 (395)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~----~---~ 127 (395)
..+..+.+...+.++.++++.....++.+.++.+|+..++++++..++++++|+.++..+ +.|+|++.+ . +
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEEEEEEESSTTCCEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEEEEEeecCCCCeeEE
Confidence 112222233334455555555556778899999999999999888888999999998876 678887753 3 7
Q ss_pred EEeCEEEEeeCCCCCCCCCCCCCCCCC----cccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCe-EEEEE
Q 039923 128 FMCRWLIVATGENEVPVLPKIPGISEF----RGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQ-VSLVV 202 (395)
Q Consensus 128 ~~~d~lVlAtG~~~~~~~p~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~-V~~~~ 202 (395)
+.||+||+|||.++.|..|.+||++.+ .+.+.|+..+.+...+.+++|+|||+|.+|+|+|..|++.+++ |++++
T Consensus 164 ~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~ 243 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSL 243 (447)
T ss_dssp EEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEEC
T ss_pred EEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEe
Confidence 999999999998889999999997653 4568888888887777899999999999999999999999999 99998
Q ss_pred ecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhh
Q 039923 203 RDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKI 282 (395)
Q Consensus 203 r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (395)
|++. + +
T Consensus 244 r~~~-~-------------------------------------------------------------------------l 249 (447)
T 2gv8_A 244 LGGG-D-------------------------------------------------------------------------I 249 (447)
T ss_dssp TTCC-S-------------------------------------------------------------------------C
T ss_pred CCCC-c-------------------------------------------------------------------------C
Confidence 8761 1 1
Q ss_pred hcCCeEEecCccEEe--cCeEEEeCCcE-ecCcEEEEcCCCCCCCCcc-----ccccccccccCCCCCCCCCCCCC---C
Q 039923 283 KSGEIKVVPGIQKFT--AKGAEFVNRTV-KEFDSIILATGYRSNVSSW-----LKEASLFNQKNNNNPQDSYPKNW---K 351 (395)
Q Consensus 283 ~~~~v~~~~~v~~~~--~~~v~~~~g~~-i~~D~vi~atG~~~~~~~~-----~~~~~l~~~~~~g~~~~~~~~~~---~ 351 (395)
...+|.+...|+++. +.++.+.||+. +++|.||+|||++|++ .+ +++.+.. +..+++..++ .+.+ +
T Consensus 250 ~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~-~~l~~~~l~~~~~~-i~~~~~~~~~-~~~~v~~~ 326 (447)
T 2gv8_A 250 QNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSV-PFPSLAKLKSPETK-LIDDGSHVHN-VYQHIFYI 326 (447)
T ss_dssp BCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCC-CCHHHHSCCSTTTC-CCSSSSSCCS-EETTTEET
T ss_pred CCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCC-CCCcccccccccCc-eecCCCcccc-cccccccC
Confidence 123455555677773 45799999986 7999999999999998 55 5544222 2234555544 2222 6
Q ss_pred CCCCeEEEEecccccc--cchhhHHHHHHHHHhhh
Q 039923 352 GKNGVYSVGFARQGLL--GISMDAHKVADDIASQW 384 (395)
Q Consensus 352 ~~~~iya~Gd~~~~~~--~a~~~g~~~a~~i~~~~ 384 (395)
+.|+||++||+..... .|..||+++|++|.+.+
T Consensus 327 ~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 327 PDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp TCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCcEEEEeccccccCchHHHHHHHHHHHHHcCCC
Confidence 8999999999986644 88999999999998875
No 8
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=6.2e-40 Score=299.89 Aligned_cols=295 Identities=18% Similarity=0.247 Sum_probs=232.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++...+ +.++.++ .....++..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~-~~~~~~------~~~~~~~-------~~~~~~~~~~ 72 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL-YPEKYI------YDVAGFP-------KIRAQELINN 72 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH-CTTSEE------CCSTTCS-------SEEHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc-CCCceE------eccCCCC-------CCCHHHHHHH
Confidence 4799999999999999999999999999999999999988432 332221 1111111 1256899999
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC-CCCCCCCCCCCCCcccEeecCCCCCCc
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE-VPVLPKIPGISEFRGRLLHTSTYKNGV 168 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~ 168 (395)
+.+.+.+++++++++++|+.++..++ +.|.+++++.++.||+||+|||..+ .|..|.+||.+.+.+..++. .+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~ 150 (332)
T 3lzw_A 73 LKEQMAKFDQTICLEQAVESVEKQAD-GVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQ 150 (332)
T ss_dssp HHHHHTTSCCEEECSCCEEEEEECTT-SCEEEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGG
T ss_pred HHHHHHHhCCcEEccCEEEEEEECCC-CcEEEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHH
Confidence 99999999999999999999998763 4788999886699999999999532 78888899988766555666 666666
Q ss_pred CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccc
Q 039923 169 EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGD 248 (395)
Q Consensus 169 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
...+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+.+...
T Consensus 151 ~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~-~~~~~~~----------------------------------- 194 (332)
T 3lzw_A 151 KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD-KFRAHEH----------------------------------- 194 (332)
T ss_dssp GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS-SCSSCHH-----------------------------------
T ss_pred HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC-cCCccHH-----------------------------------
Confidence 6679999999999999999999999999999999887 3322110
Q ss_pred hhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe----EEEeC-----CcEecCcEEEEc
Q 039923 249 TKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG----AEFVN-----RTVKEFDSIILA 317 (395)
Q Consensus 249 ~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~~~~-----g~~i~~D~vi~a 317 (395)
..+.+++.+|.+..+ +.++.... +.+.+ ++++++|.||+|
T Consensus 195 -----------------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a 245 (332)
T 3lzw_A 195 -----------------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVN 245 (332)
T ss_dssp -----------------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEEC
T ss_pred -----------------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEe
Confidence 112233445666654 66666543 77766 457999999999
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc---ccc---cchhhHHHHHHHHHhhhccccc
Q 039923 318 TGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ---GLL---GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 318 tG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~---~~~---~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
+|++|+. .+++.+++. . ++|++.+| ++++++.|||||+|||+. .+. .|..||+.+|.+|.+.+.++..
T Consensus 246 ~G~~p~~-~~~~~~~~~-~-~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 319 (332)
T 3lzw_A 246 YGFVSSL-GPIKNWGLD-I-EKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKAR 319 (332)
T ss_dssp CCEECCC-GGGGGSSCC-E-ETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred eccCCCc-hHHhhcCcc-c-cCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhhChhhc
Confidence 9999997 678888887 4 78999998 688899999999999984 222 8899999999999999987654
No 9
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.8e-39 Score=295.61 Aligned_cols=288 Identities=17% Similarity=0.183 Sum_probs=228.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+++||+|||||++|+++|..|++.|++|+|||+. +||.|.... ....++.+ ......++.+
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~ 74 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGL-------IEIQASDMIK 74 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTS-------TTEEHHHHHH
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCC-------CCCCHHHHHH
Confidence 4589999999999999999999999999999998 888776411 11111111 1145688999
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
++.+.+.+++++++. ++|..++..+ +.|.+++.+ .++.||+||+||| +.+..|.+||...+.+..++.....+.
T Consensus 75 ~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g~~~~~d~lvlAtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~ 149 (323)
T 3f8d_A 75 VFNKHIEKYEVPVLL-DIVEKIENRG--DEFVVKTKRKGEFKADSVILGIG--VKRRKLGVPGEQEFAGRGISYCSVADA 149 (323)
T ss_dssp HHHHHHHTTTCCEEE-SCEEEEEEC----CEEEEESSSCEEEEEEEEECCC--CEECCCCCTTTTTTBTTTEESCHHHHG
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEecC--CEEEEEECCCCEEEcCEEEECcC--CCCccCCCCchhhhcCCceEEeccCCH
Confidence 999999999999888 8999999876 778888887 8999999999999 568888999988766555655555555
Q ss_pred cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhcc
Q 039923 168 VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLG 247 (395)
Q Consensus 168 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
....+++++|||+|.+|+|+|..|.+.+.+|+++.+++ .+++.+
T Consensus 150 ~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~~----------------------------------- 193 (323)
T 3f8d_A 150 PLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKAQP----------------------------------- 193 (323)
T ss_dssp GGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCSCH-----------------------------------
T ss_pred hHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCcCH-----------------------------------
Confidence 56678999999999999999999999999999999987 443310
Q ss_pred chhhcCCCCCCCCCCcccCCCCCCcccChhhHhhh-hcCCeEEecC--ccEEecC----eEEEeC---Cc--EecCcEEE
Q 039923 248 DTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKI-KSGEIKVVPG--IQKFTAK----GAEFVN---RT--VKEFDSII 315 (395)
Q Consensus 248 ~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~----~v~~~~---g~--~i~~D~vi 315 (395)
.+.+.+ +..+|++..+ |.++..+ ++.+.+ |+ ++++|.||
T Consensus 194 -----------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv 244 (323)
T 3f8d_A 194 -----------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVF 244 (323)
T ss_dssp -----------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred -----------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEE
Confidence 112222 2236777765 6677654 377766 76 79999999
Q ss_pred EcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccc---cc---cchhhHHHHHHHHHhhhcccc
Q 039923 316 LATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQG---LL---GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 316 ~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~---~a~~~g~~~a~~i~~~~~~~~ 388 (395)
+|+|++|+. .+++..++. .+++|++.+| ++++++.||||++|||+.. +. .|+.||+.+|.+|.+.+.+++
T Consensus 245 ~a~G~~p~~-~~~~~~g~~-~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 245 IEIGFDPPT-DFAKSNGIE-TDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp ECCCEECCH-HHHHHTTCC-BCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEECCCCCh-hHHhhcCee-ecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 999999997 677888888 7899999999 6888999999999999985 22 899999999999999997654
No 10
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.2e-39 Score=288.59 Aligned_cols=284 Identities=15% Similarity=0.158 Sum_probs=222.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
++||+|||||++|+++|..|++.|++|+|||+....+..+.. ...++. .......++.++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~-------------~~~~~~-------~~~~~~~~~~~~ 61 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH-------------SHGFLG-------QDGKAPGEIIAE 61 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC-------------CCSSTT-------CTTCCHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh-------------hcCCcC-------CCCCCHHHHHHH
Confidence 589999999999999999999999999999997643321110 001110 123567889999
Q ss_pred HHHHHHHc-CCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 90 MEAYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
+.+.+.++ ++.+. +++|+.++..+ +.|.+++.+ .++.||+||+||| +.+..|.+||...+.+...+.+.+.+.
T Consensus 62 ~~~~~~~~~~v~~~-~~~v~~i~~~~--~~~~v~~~~g~~~~~d~vviAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~ 136 (297)
T 3fbs_A 62 ARRQIERYPTIHWV-EGRVTDAKGSF--GEFIVEIDGGRRETAGRLILAMG--VTDELPEIAGLRERWGSAVFHCPYCHG 136 (297)
T ss_dssp HHHHHTTCTTEEEE-ESCEEEEEEET--TEEEEEETTSCEEEEEEEEECCC--CEEECCCCBTTGGGBTTTEESCHHHHT
T ss_pred HHHHHHhcCCeEEE-EeEEEEEEEcC--CeEEEEECCCCEEEcCEEEECCC--CCCCCCCCCCchhhcCCeeEEcccCcc
Confidence 99999887 55554 45899999887 678898877 7899999999999 678888999988765555666555555
Q ss_pred cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhcc
Q 039923 168 VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLG 247 (395)
Q Consensus 168 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
....+++++|||+|.+|+|+|..|.+.| +|+++.+++. .+
T Consensus 137 ~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-~~-------------------------------------- 176 (297)
T 3fbs_A 137 YELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-EP-------------------------------------- 176 (297)
T ss_dssp GGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-CC--------------------------------------
T ss_pred hhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-CC--------------------------------------
Confidence 5667999999999999999999999998 9999988762 00
Q ss_pred chhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEecC-eEEEeCCcEecCcEEEEcCCCCCCCC
Q 039923 248 DTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTAK-GAEFVNRTVKEFDSIILATGYRSNVS 325 (395)
Q Consensus 248 ~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~-~v~~~~g~~i~~D~vi~atG~~~~~~ 325 (395)
...+.+.+++.+|+++.. |+++... .+.+.+|+++++|.||+|+|++|+.
T Consensus 177 ---------------------------~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~- 228 (297)
T 3fbs_A 177 ---------------------------DADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITV- 228 (297)
T ss_dssp ---------------------------CHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCC-
T ss_pred ---------------------------CHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCc-
Confidence 111223334445665543 7777776 7889999999999999999999998
Q ss_pred cccccccccccc--CCC-CCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHHHHhhhcccc
Q 039923 326 SWLKEASLFNQK--NNN-NPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 326 ~~~~~~~l~~~~--~~g-~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~i~~~~~~~~ 388 (395)
.+++.+++. .+ ++| ++.+| ++++++.|+||++|||+..+. .|+.||+.+|.+|.+.+..++
T Consensus 229 ~~~~~~g~~-~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 229 DWIEKLGCA-VEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp SCHHHHTCC-EEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hhHHhcCCc-cccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 577777877 55 457 88888 678899999999999998544 999999999999999987654
No 11
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=3.1e-39 Score=296.04 Aligned_cols=291 Identities=16% Similarity=0.215 Sum_probs=224.1
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecC----CCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCH
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKE----SCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSG 83 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
.+++||+|||||++|+++|..|++.|++|+|||+. ..+||.|.... ....++ .++.....
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~ 83 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGLTG 83 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCEEH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccCCH
Confidence 34589999999999999999999999999999995 46777665421 111111 11333567
Q ss_pred HHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc---c-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEe
Q 039923 84 QQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH---E-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLL 159 (395)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~---~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~ 159 (395)
.++.+++.+.+.+++++++.++ |..++... +.|.+++. + .++.||+||+||| +.+..|.+||.+.+....+
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~v~~~~~~~~~~~~~d~vvlAtG--~~~~~~~~~g~~~~~~~~~ 158 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLSS--KPFKLWTEFNEDAEPVTTDAIILATG--ASAKRMHLPGEETYWQKGI 158 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEEEEETTCSSSCCEEEEEEEECCC--EEECCCCCTTHHHHBTTTE
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEEEEEEecCCCcEEEeCEEEECcC--CCcCCCCCCCchhccCccE
Confidence 8999999999999999998887 99998876 77888773 3 7899999999999 6788888898765544444
Q ss_pred ecCCCCCCc--CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHH
Q 039923 160 HTSTYKNGV--EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRF 237 (395)
Q Consensus 160 ~~~~~~~~~--~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (395)
+.....+.. ...+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~-~~~~~-------------------------- 211 (338)
T 3itj_A 159 SACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD-HLRAS-------------------------- 211 (338)
T ss_dssp ESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCSC--------------------------
T ss_pred EEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccCCC--------------------------
Confidence 544333332 4578999999999999999999999999999999887 33221
Q ss_pred HHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhc-CCeEEecC--ccEEecCe-----EEEeC----
Q 039923 238 LLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKS-GEIKVVPG--IQKFTAKG-----AEFVN---- 305 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~~-----v~~~~---- 305 (395)
..+.+.+.+ .+|+++.+ |.++...+ +.+.+
T Consensus 212 --------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g 253 (338)
T 3itj_A 212 --------------------------------------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKN 253 (338)
T ss_dssp --------------------------------------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTT
T ss_pred --------------------------------------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCC
Confidence 111222322 36777755 66766543 77766
Q ss_pred -CcEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc--c--cchhhHHHHHHHH
Q 039923 306 -RTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL--L--GISMDAHKVADDI 380 (395)
Q Consensus 306 -g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~--~--~a~~~g~~~a~~i 380 (395)
++++++|.||+|+|++|+. .+++. ++. ++++|++.+++.+++++.|+||++|||+..+ . .|+.+|+.+|.+|
T Consensus 254 ~~~~i~~D~vi~a~G~~p~~-~~~~~-~l~-~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 330 (338)
T 3itj_A 254 EETDLPVSGLFYAIGHTPAT-KIVAG-QVD-TDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDA 330 (338)
T ss_dssp EEEEEECSEEEECSCEEECC-GGGBT-TBC-BCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCEEEEEeCCCCCh-hHhhC-ceE-ecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHH
Confidence 4679999999999999997 55555 788 7889999865578899999999999999642 2 8999999999999
Q ss_pred Hhhhccc
Q 039923 381 ASQWNSE 387 (395)
Q Consensus 381 ~~~~~~~ 387 (395)
...+.++
T Consensus 331 ~~~l~~~ 337 (338)
T 3itj_A 331 EKYLTSL 337 (338)
T ss_dssp HHHHTTC
T ss_pred HHHHhcC
Confidence 9999764
No 12
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.5e-38 Score=288.37 Aligned_cols=288 Identities=20% Similarity=0.251 Sum_probs=218.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
++||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++. ++......++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPG------FPEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTT------CSSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCC------CCCCCCHHHHHHH
Confidence 589999999999999999999999999999998 67876653210 001111 1123457889999
Q ss_pred HHHHHHHcCCccccCceEEEEEEc--CCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYD--AAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~--~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
+.+.+++++++++. ++|..++.. ++ ..|.+.+.+ .++.||+||+||| +.+..|.+||.+.+.+..++.....+
T Consensus 71 l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~g~~~~~~~vv~AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~ 146 (325)
T 2q7v_A 71 MHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPFTVRGYNGEYRAKAVILATG--ADPRKLGIPGEDNFWGKGVSTCATCD 146 (325)
T ss_dssp HHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCEEEEESSCEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEESCHHHH
T ss_pred HHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEEEEECCCCEEEeCEEEECcC--CCcCCCCCCChhhccCceEEEeccCC
Confidence 99999999999876 589999886 32 226676554 7899999999999 57888889998766544455544334
Q ss_pred CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhc
Q 039923 167 GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVL 246 (395)
Q Consensus 167 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.....+++++|||+|.+|+|+|..|.+.+++|++++|++ .+.+.
T Consensus 147 ~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~----------------------------------- 190 (325)
T 2q7v_A 147 GFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD-TLRAN----------------------------------- 190 (325)
T ss_dssp GGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSC-----------------------------------
T ss_pred HHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC-cCCcc-----------------------------------
Confidence 445578999999999999999999999999999999887 22110
Q ss_pred cchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhh-hcCCeEEecC--ccEEecC----eEEEe---CCc--EecCcEE
Q 039923 247 GDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKI-KSGEIKVVPG--IQKFTAK----GAEFV---NRT--VKEFDSI 314 (395)
Q Consensus 247 ~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~----~v~~~---~g~--~i~~D~v 314 (395)
..+.+.+ +..++++..+ +.++..+ ++.+. +|+ ++++|.|
T Consensus 191 -----------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~v 241 (325)
T 2q7v_A 191 -----------------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGV 241 (325)
T ss_dssp -----------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEE
T ss_pred -----------------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEE
Confidence 0011122 2236666655 6666544 46665 565 7899999
Q ss_pred EEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-c---cchhhHHHHHHHHHhhhccc
Q 039923 315 ILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-L---GISMDAHKVADDIASQWNSE 387 (395)
Q Consensus 315 i~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-~---~a~~~g~~~a~~i~~~~~~~ 387 (395)
|+|+|++|+. .+++.. +. ++++|++.+| ++++++.|+||++|||+..+ . .|..||+.+|.+|.+.+.++
T Consensus 242 i~a~G~~p~~-~~l~~~-~~-~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 242 FIFIGHVPNT-AFVKDT-VS-LRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp EECSCEEESC-GGGTTT-SC-BCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEccCCCCCh-HHHhhh-cc-cCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999997 566666 66 7789999999 67889999999999998752 2 89999999999999998754
No 13
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.8e-38 Score=288.02 Aligned_cols=290 Identities=17% Similarity=0.202 Sum_probs=222.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEE-EecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLI-IEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~l-ie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.++||+|||||++|+++|..|++.|++|+| +|+ ..+||.|..... ...++ .++......++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 468999999999999999999999999999 999 677887654211 00111 112345778999
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEE--EEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR--VKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYK 165 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~--v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~ 165 (395)
.++.+++++++++++.+ +|..+ .++..+.|. +++++ ++.||+||+||| +.+..|.+||.+.+.+..++...+.
T Consensus 66 ~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG--~~~~~~~~~g~~~~~~~~~~~~~~~ 140 (315)
T 3r9u_A 66 APWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTG--SAPKKAGFKGEDEFFGKGVSTCATC 140 (315)
T ss_dssp HHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCC--EEECCCCCBTTTTTBTTTEESCHHH
T ss_pred HHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeC--CCCCCCCCCChhhcCCCeEEeeecc
Confidence 99999999999998877 88888 554235677 44455 899999999999 6788889999887666666666555
Q ss_pred CCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhh
Q 039923 166 NGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLV 245 (395)
Q Consensus 166 ~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (395)
+.....+++++|||+|.+|+|+|..|.+.+.+|+++.+++ .+.+. .
T Consensus 141 ~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~--~------------------------------- 186 (315)
T 3r9u_A 141 DGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRD-EFRAA--P------------------------------- 186 (315)
T ss_dssp HGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS-SCBSC--H-------------------------------
T ss_pred cccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC-CCCCC--H-------------------------------
Confidence 5556678999999999999999999999999999999887 33110 0
Q ss_pred ccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe-----EEEe--CCc--EecCcEE
Q 039923 246 LGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG-----AEFV--NRT--VKEFDSI 314 (395)
Q Consensus 246 ~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-----v~~~--~g~--~i~~D~v 314 (395)
....+.+++.+|++..+ +.++.... +.+. +|+ ++++|.|
T Consensus 187 ------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~v 236 (315)
T 3r9u_A 187 ------------------------------STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGI 236 (315)
T ss_dssp ------------------------------HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCE
T ss_pred ------------------------------HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeE
Confidence 00111223456777654 66665443 6666 775 7999999
Q ss_pred EEcCCCCCCCCccccc---cc-cccccCCCCCCCCCCCCCCCCCCeEEEEecccc-cc---cchhhHHHHHHHHHhhhcc
Q 039923 315 ILATGYRSNVSSWLKE---AS-LFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQG-LL---GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 315 i~atG~~~~~~~~~~~---~~-l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-~~---~a~~~g~~~a~~i~~~~~~ 386 (395)
|+|+|++|+. .+++. ++ +. ++++|++.+| ++++|+.||||++|||+.. +. .|+.||+.+|.+|.+.+.+
T Consensus 237 v~a~G~~p~~-~~~~~~~~~g~l~-~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 237 FTFVGLNVRN-EILKQDDSKFLCN-MEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp EECSCEEECC-GGGBCTTSCBSSC-BCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCc-hhhhcccccceee-ecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHh
Confidence 9999999997 55544 55 87 7889999999 6888999999999999843 22 8999999999999999875
Q ss_pred c
Q 039923 387 E 387 (395)
Q Consensus 387 ~ 387 (395)
+
T Consensus 314 ~ 314 (315)
T 3r9u_A 314 L 314 (315)
T ss_dssp C
T ss_pred c
Confidence 4
No 14
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=4.6e-38 Score=284.87 Aligned_cols=287 Identities=19% Similarity=0.229 Sum_probs=218.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
++||+|||||++|+++|..|++.|+ +|+|||+. .+||.|..... ...++ .++......++.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~ 63 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYP------GVKEVVSGLDFMQ 63 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCST------TCCSCBCHHHHHH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCC------CCcccCCHHHHHH
Confidence 3789999999999999999999999 99999995 67776543210 00111 1122456788999
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
++.+.+.+.+++++. ++|..++..+ +.|.+++.+ .++.||+||+||| +.+..|++||.+.+.+..++.....+.
T Consensus 64 ~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g~~~~~~~vv~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~ 138 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEM-TAVQRVSKKD--SHFVILAEDGKTFEAKSVIIATG--GSPKRTGIKGESEYWGKGVSTCATCDG 138 (311)
T ss_dssp HHHHHHHTTSCEEEC-SCEEEEEEET--TEEEEEETTSCEEEEEEEEECCC--EEECCCCCBTHHHHBTTTEESCHHHHG
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEEcC--CEEEEEEcCCCEEECCEEEECCC--CCCCCCCCCChhhccCCcEEEeecCCh
Confidence 999999999999877 7899998876 667787665 7899999999999 677888888876543333444433333
Q ss_pred cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhcc
Q 039923 168 VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLG 247 (395)
Q Consensus 168 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
....+++++|||+|.+|+|+|..|.+.|++|++++|++ .+.. .
T Consensus 139 ~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~--~---------------------------------- 181 (311)
T 2q0l_A 139 FFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD-GFRC--A---------------------------------- 181 (311)
T ss_dssp GGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS-SCCS--C----------------------------------
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC-ccCC--C----------------------------------
Confidence 44568999999999999999999999999999999887 2210 0
Q ss_pred chhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhh-cCCeEEecC--ccEEecC-----eEEEe---CCc--EecCcEE
Q 039923 248 DTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIK-SGEIKVVPG--IQKFTAK-----GAEFV---NRT--VKEFDSI 314 (395)
Q Consensus 248 ~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~~~~~-----~v~~~---~g~--~i~~D~v 314 (395)
..+.+.+. +.+|++..+ +.++... ++.+. +|+ ++++|.|
T Consensus 182 ----------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~v 233 (311)
T 2q0l_A 182 ----------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGF 233 (311)
T ss_dssp ----------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEE
T ss_pred ----------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEE
Confidence 01122222 246776655 6666543 46666 675 7899999
Q ss_pred EEcCCCCCCCCccccccc----cccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-c---cchhhHHHHHHHHHhhhcc
Q 039923 315 ILATGYRSNVSSWLKEAS----LFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-L---GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 315 i~atG~~~~~~~~~~~~~----l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-~---~a~~~g~~~a~~i~~~~~~ 386 (395)
|+|+|++|+. .+++..+ +. ++++|++.+| ++++++.|+||++|||+..+ . .|+.||+.+|.+|.+.+.+
T Consensus 234 i~a~G~~p~~-~~l~~~g~~~~l~-~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 234 FIFVGYDVNN-AVLKQEDNSMLCK-CDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp EECSCEEECC-GGGBCTTSCBSSC-BCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCccCh-hhhhcccccceeE-eccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHhh
Confidence 9999999997 6666664 77 7789999999 67889999999999998752 2 8999999999999998864
No 15
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.9e-38 Score=288.41 Aligned_cols=298 Identities=19% Similarity=0.256 Sum_probs=224.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... ++..+.+ ......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~-------~~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKY------IYDVAGF-------PKVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSE------ECCSTTC-------SSEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCce------eeccCCC-------CCCCHHHHHHH
Confidence 4799999999999999999999999999999999998877532 22111 1111111 11346788899
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCC-CCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENE-VPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
+.+.+.+++++++++++|+.++..+ +.|++++++ .++.||+||+|||..+ .|..|+++|.+.+.+..++.. +.+.
T Consensus 71 l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~-~~~~ 147 (335)
T 2zbw_A 71 LVEQVAPFNPVYSLGERAETLEREG--DLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYA-VKSK 147 (335)
T ss_dssp HHHHHGGGCCEEEESCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESS-CSCG
T ss_pred HHHHHHHcCCEEEeCCEEEEEEECC--CEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEe-cCch
Confidence 9999999999998999999999876 578888876 6899999999999532 577778888766544323322 2333
Q ss_pred cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhcc
Q 039923 168 VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLG 247 (395)
Q Consensus 168 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
....+++++|||+|.+|+|+|..|.+.|++|+++.|++ .+.+... ..
T Consensus 148 ~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~~~~-------~~------------------------- 194 (335)
T 2zbw_A 148 AEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRAHEA-------SV------------------------- 194 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCSCHH-------HH-------------------------
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCccHH-------HH-------------------------
Confidence 44578999999999999999999999999999999987 4433210 00
Q ss_pred chhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEe---CC--cEecCcEEEE
Q 039923 248 DTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFV---NR--TVKEFDSIIL 316 (395)
Q Consensus 248 ~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~---~g--~~i~~D~vi~ 316 (395)
..+.+.+++.+|+++.+ |.++..+ ++.+. +| +++++|.||+
T Consensus 195 ----------------------------~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 195 ----------------------------KELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp ----------------------------HHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------------HHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEE
Confidence 01223334446666655 6666554 47776 67 5799999999
Q ss_pred cCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc---c---cchhhHHHHHHHHHhhhccccc
Q 039923 317 ATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL---L---GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 317 atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~---~---~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
|+|++|+. .+++..++. .+ +|++.+| ++++++.|+||++|||+..+ . .|+.||..+|.+|.+.+.+...
T Consensus 247 a~G~~p~~-~~l~~~~~~-~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (335)
T 2zbw_A 247 LAGYITKL-GPLANWGLA-LE-KNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALK 321 (335)
T ss_dssp CCCEEEEC-GGGGGSCCC-EE-TTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred eecCCCCc-hHhhhccee-cc-CCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99999997 577777887 55 7889888 68889999999999998532 1 7889999999999999876543
No 16
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=8.1e-38 Score=289.09 Aligned_cols=299 Identities=19% Similarity=0.211 Sum_probs=223.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... .+..+.+ ......++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~-------~~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGF-------PEVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTC-------SSEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCC-------CCCCHHHHHHH
Confidence 4799999999999999999999999999999999898877532 22111 1111111 01346788999
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCC-CCCCCCCCC-CCCCcccEeecCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENE-VPVLPKIPG-ISEFRGRLLHTSTYKN 166 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~-~~~~p~~~g-~~~~~~~~~~~~~~~~ 166 (395)
+.+.+++++++++++++|+.++..++ +.|+|++.+ .++.||+||+|||..+ .|..|.++| .+.+.+..++.. +.+
T Consensus 80 l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~-~~~ 157 (360)
T 3ab1_A 80 LWAQAERYNPDVVLNETVTKYTKLDD-GTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYA-VKS 157 (360)
T ss_dssp HHHHHHTTCCEEECSCCEEEEEECTT-SCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESS-CSC
T ss_pred HHHHHHHhCCEEEcCCEEEEEEECCC-ceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEe-cCC
Confidence 99999988999999999999998753 478888876 6899999999999643 566777888 665544323332 234
Q ss_pred CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhc
Q 039923 167 GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVL 246 (395)
Q Consensus 167 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.....+++++|||+|.+|+|+|..|.+.+.+|++++|++ .+.+... . .
T Consensus 158 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~~~-------~----~-------------------- 205 (360)
T 3ab1_A 158 VEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQGHGK-------T----A-------------------- 205 (360)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSSCSH-------H----H--------------------
T ss_pred HHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCCCHH-------H----H--------------------
Confidence 445578999999999999999999999999999999987 3322110 0 0
Q ss_pred cchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-----eEEEe--CC--cEecCcEEE
Q 039923 247 GDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-----GAEFV--NR--TVKEFDSII 315 (395)
Q Consensus 247 ~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~--~g--~~i~~D~vi 315 (395)
..+.+..++.++++..+ |.++... ++.+. +| .++++|.||
T Consensus 206 -----------------------------~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi 256 (360)
T 3ab1_A 206 -----------------------------HEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLL 256 (360)
T ss_dssp -----------------------------HSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEE
T ss_pred -----------------------------HHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEE
Confidence 01122333456777665 6666543 46665 77 579999999
Q ss_pred EcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc---c---cchhhHHHHHHHHHhhhccccc
Q 039923 316 LATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL---L---GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 316 ~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~---~---~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
+|+|++|+. .+++..++. .+ +|++.+| ++++++.|+||++|||+..+ . .|..||..+|.+|.+.+.+...
T Consensus 257 ~a~G~~p~~-~~l~~~~~~-~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 332 (360)
T 3ab1_A 257 ILIGFKSNL-GPLARWDLE-LY-ENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPGEK 332 (360)
T ss_dssp ECCCBCCSC-GGGGGSSCC-EE-TTEEECC-TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred ECCCCCCCH-HHHHhhccc-cc-cCeeeec-CCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhcCCccc
Confidence 999999997 577777887 55 7889898 58889999999999998532 1 7889999999999999876543
No 17
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1e-37 Score=283.61 Aligned_cols=287 Identities=20% Similarity=0.259 Sum_probs=215.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.+.... ....++.+ ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAP----------LVENYLGF-------KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCS----------CBCCBTTB-------SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccc----------hhhhcCCC-------cccCHHHHHHH
Confidence 479999999999999999999999999999994 6677554211 00001110 12456788888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCcC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGVE 169 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 169 (395)
+.+.+.+.+++++. ++|..++..+ +.|+|++++.++.||+||+||| +.+..|.+||.+.+.+..++.....+...
T Consensus 78 ~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~~~~~~~~li~AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 152 (319)
T 3cty_A 78 FADHAANYAKIREG-VEVRSIKKTQ--GGFDIETNDDTYHAKYVIITTG--TTHKHLGVKGESEYFGKGTSYCSTCDGYL 152 (319)
T ss_dssp HHHHHHTTSEEEET-CCEEEEEEET--TEEEEEESSSEEEEEEEEECCC--EEECCCCCBTTTTTBTTTEESCHHHHGGG
T ss_pred HHHHHHHcCCEEEE-eeEEEEEEeC--CEEEEEECCCEEEeCEEEECCC--CCcccCCCCChHHhCCceEEEEEecchhh
Confidence 99999988988877 6899998876 6677877667899999999999 67788888887665433344333233334
Q ss_pred CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccch
Q 039923 170 FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDT 249 (395)
Q Consensus 170 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (395)
..+++++|||+|.+|+|+|..|.+.+++|++++|++ .+.+.
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~-~~~~~-------------------------------------- 193 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP-KYMCE-------------------------------------- 193 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS-SCCSC--------------------------------------
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC-ccCCC--------------------------------------
Confidence 568999999999999999999999999999999887 22110
Q ss_pred hhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-----eEEEe---CCc--EecCcEEEEc
Q 039923 250 KQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-----GAEFV---NRT--VKEFDSIILA 317 (395)
Q Consensus 250 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~---~g~--~i~~D~vi~a 317 (395)
..+.+.+.+.++++..+ +.++... ++.+. +|+ ++++|.||+|
T Consensus 194 --------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 194 --------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp --------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred --------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 00112222234444443 5555433 35665 565 6899999999
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-c---cchhhHHHHHHHHHhhhccc
Q 039923 318 TGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-L---GISMDAHKVADDIASQWNSE 387 (395)
Q Consensus 318 tG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-~---~a~~~g~~~a~~i~~~~~~~ 387 (395)
+|++|+. .+++..++. ++++|++.+| ++++++.|+||++|||+..+ . .|+.||+.+|.+|.+.+.++
T Consensus 248 ~G~~p~~-~~l~~~gl~-~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 248 VGLIPQT-SFLKDSGVK-LDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp CCEEECC-GGGTTSCCC-BCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred eCCccCh-HHHhhcccc-ccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999997 677777888 7889999999 66889999999999998763 2 89999999999999998754
No 18
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-37 Score=281.87 Aligned_cols=289 Identities=18% Similarity=0.206 Sum_probs=205.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+.|||+||||||||++||.+|++.|++|+|||+. .+||...... ....++.+ ......++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~----------~i~~~p~~-------~~~~~~~~~~ 66 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTE----------EVENFPGF-------EMITGPDLST 66 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC-------SSBCHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeeccc----------ccCCcCCc-------cccchHHHHH
Confidence 4599999999999999999999999999999986 5666432210 00011111 1234567777
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCc
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGV 168 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 168 (395)
.......+....+..+..+...... ....+...+++++||+|||||| ++|+.|++||.+.+.+..++.....+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~liiAtG--s~~~~~~ipG~~~~~~~~v~~~~~~~~~ 141 (312)
T 4gcm_A 67 KMFEHAKKFGAVYQYGDIKSVEDKG---EYKVINFGNKELTAKAVIIATG--AEYKKIGVPGEQELGGRGVSYCAVCDGA 141 (312)
T ss_dssp HHHHHHHHTTCEEEECCCCEEEECS---SCEEEECSSCEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEESCHHHHGG
T ss_pred HHHHHHhhccccccceeeeeeeeee---cceeeccCCeEEEeceeEEccc--CccCcCCCCChhhhCCccEEeeeccCcc
Confidence 7777777777776666555444433 3333555558999999999999 7899999999887766556665555566
Q ss_pred CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccc
Q 039923 169 EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGD 248 (395)
Q Consensus 169 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
...+++++|||+|.+|+|+|..|.+.|.+||+++|++ ++++.... .
T Consensus 142 ~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~------~--------------------------- 187 (312)
T 4gcm_A 142 FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRIL------Q--------------------------- 187 (312)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHH------H---------------------------
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhH------H---------------------------
Confidence 6678999999999999999999999999999999988 55543221 0
Q ss_pred hhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEE--ec----C-eE---EEeCCcEecCcEEEE
Q 039923 249 TKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKF--TA----K-GA---EFVNRTVKEFDSIIL 316 (395)
Q Consensus 249 ~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~--~~----~-~v---~~~~g~~i~~D~vi~ 316 (395)
...+....+..... +... .. . .. ...++..+++|.|++
T Consensus 188 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~ 237 (312)
T 4gcm_A 188 ------------------------------DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFI 237 (312)
T ss_dssp ------------------------------HHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ------------------------------HHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEe
Confidence 00011111111111 0000 00 0 01 112345789999999
Q ss_pred cCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-c---cchhhHHHHHHHHHhhhcccc
Q 039923 317 ATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-L---GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 317 atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-~---~a~~~g~~~a~~i~~~~~~~~ 388 (395)
++|..|+. .++...++. +++|++.+| ++++|+.|||||+|||+..+ . .|+.||+.+|.+|.++|+...
T Consensus 238 ~~g~~~~~-~~~~~~g~~--~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~l~ 309 (312)
T 4gcm_A 238 YIGMKPLT-APFKDLGIT--NDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLN 309 (312)
T ss_dssp CSCEEESC-GGGGGGTCB--CTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcCc-hhHHhccee--cCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999997 677777774 488999999 78999999999999998643 2 799999999999999987543
No 19
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-37 Score=285.01 Aligned_cols=291 Identities=17% Similarity=0.207 Sum_probs=217.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+.+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++. ++......++.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~ 75 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELMD 75 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHHH
Confidence 3579999999999999999999999999999975 67776543210 001111 122245678999
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEE-EEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRV-KTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v-~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
++.+.+.+++++++.++ |..++. . +.|+| .+.+ +++.||+||+||| +.+..|++||.+.+.+..++.....+
T Consensus 76 ~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~v~~~~~g~~~~~d~lviAtG--~~~~~~~i~g~~~~~~~~~~~~~~~~ 149 (335)
T 2a87_A 76 EMREQALRFGADLRMED-VESVSL-H--GPLKSVVTADGQTHRARAVILAMG--AAARYLQVPGEQELLGRGVSSCATCD 149 (335)
T ss_dssp HHHHHHHHTTCEEECCC-EEEEEC-S--SSSEEEEETTSCEEEEEEEEECCC--EEECCCCCTHHHHTBTTTEESCHHHH
T ss_pred HHHHHHHHcCCEEEEee-EEEEEe-C--CcEEEEEeCCCCEEEeCEEEECCC--CCccCCCCCchHhccCCceEEeeccc
Confidence 99999999999988886 888887 3 55667 6655 6899999999999 67788888886654433344433333
Q ss_pred CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhc
Q 039923 167 GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVL 246 (395)
Q Consensus 167 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.....+++++|||+|.+|+|+|..|.+.+++|++++|++ .+.+..
T Consensus 150 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~-~~~~~~---------------------------------- 194 (335)
T 2a87_A 150 GFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD-EFRASK---------------------------------- 194 (335)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS-SCSSCT----------------------------------
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC-cCCccH----------------------------------
Confidence 334578999999999999999999999999999999887 331110
Q ss_pred cchhhcCCCCCCCCCCcccCCCCCCcccChhhH-hhhhcCCeEEecC--ccEEecCe----EEEe---CC--cEecCcEE
Q 039923 247 GDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAF-AKIKSGEIKVVPG--IQKFTAKG----AEFV---NR--TVKEFDSI 314 (395)
Q Consensus 247 ~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~~----v~~~---~g--~~i~~D~v 314 (395)
.+. +.+++.+|++..+ |.++...+ +.+. +| +++++|.|
T Consensus 195 ------------------------------~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~v 244 (335)
T 2a87_A 195 ------------------------------IMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGV 244 (335)
T ss_dssp ------------------------------THHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCE
T ss_pred ------------------------------HHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEE
Confidence 011 1123446777655 66666543 6665 35 57999999
Q ss_pred EEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhcccccc
Q 039923 315 ILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNSETRH 390 (395)
Q Consensus 315 i~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~~~~~ 390 (395)
|+|+|++|+. .+++ .++. +|++|++.+|+..++++.|+||++|||+..+. .|+.+|+.+|.+|...+.++...
T Consensus 245 i~a~G~~p~~-~~~~-~~l~-~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~~~~~ 321 (335)
T 2a87_A 245 FVAIGHEPRS-GLVR-EAID-VDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAAT 321 (335)
T ss_dssp EECSCEEECC-TTTB-TTBC-BCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEccCCccCh-hHhh-cccc-cCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhcCcCc
Confidence 9999999997 4554 4677 77899999995557899999999999987632 88999999999999999766543
No 20
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=3.2e-37 Score=279.23 Aligned_cols=288 Identities=19% Similarity=0.245 Sum_probs=217.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITYM 90 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
+||+|||||++|+++|..|++.|++|+|||+ .+||.|.... .+ + .+.. ..+....++.+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~--~~----~----~~~~-------~~~~~~~~~~~~~ 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV--DI----E----NYIS-------VPKTEGQKLAGAL 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC--EE----C----CBTT-------BSSEEHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc--cc----c----cccC-------cCCCCHHHHHHHH
Confidence 6899999999999999999999999999986 4677665310 00 0 0000 1123567889999
Q ss_pred HHHHHHcCCccccCceEEEEEEcCC-CCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCc
Q 039923 91 EAYANHFEIEPLLGQEVQWAKYDAA-MGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGV 168 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~~V~~v~~~~~-~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 168 (395)
.+.+++++++++.+++|+.++...+ .+.|.+++++ .++.||+||+||| +.+..|++||.+.+....++.....+..
T Consensus 63 ~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 140 (310)
T 1fl2_A 63 KVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGP 140 (310)
T ss_dssp HHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEESCHHHHGG
T ss_pred HHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcC--CCcCCCCCCChhhcccceeEEeccCcHh
Confidence 9999999999999999999987542 2468888876 6899999999999 5677788898876644434443332233
Q ss_pred CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccc
Q 039923 169 EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGD 248 (395)
Q Consensus 169 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
...+++++|||+|.+|+|+|..|.+.+++|++++|++ .+. . .
T Consensus 141 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~-~-~----------------------------------- 182 (310)
T 1fl2_A 141 LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP-EMK-A-D----------------------------------- 182 (310)
T ss_dssp GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS-SCC-S-C-----------------------------------
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc-ccC-c-c-----------------------------------
Confidence 4568999999999999999999999999999999887 221 0 0
Q ss_pred hhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhc-CCeEEecC--ccEEecC-----eEEEeC---Cc--EecCcEEE
Q 039923 249 TKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKS-GEIKVVPG--IQKFTAK-----GAEFVN---RT--VKEFDSII 315 (395)
Q Consensus 249 ~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~-----~v~~~~---g~--~i~~D~vi 315 (395)
..+.+.+++ .+++++.+ +.++... ++.+.+ |+ ++++|.||
T Consensus 183 ---------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi 235 (310)
T 1fl2_A 183 ---------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIF 235 (310)
T ss_dssp ---------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred ---------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEE
Confidence 011222333 35666655 6666543 466654 53 68999999
Q ss_pred EcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhcccc
Q 039923 316 LATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 316 ~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~~~ 388 (395)
+|+|++|+. .++.+. +. ++++|++.+| ++++++.|+||++|||+..+. .|+.+|+.+|.+|.+.+.+++
T Consensus 236 ~a~G~~p~~-~~l~~~-l~-~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 236 VQIGLLPNT-NWLEGA-VE-RNRMGEIIID-AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp ECSCEEESC-GGGTTT-SC-BCTTSCBCCC-TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EeeCCccCc-hHHhcc-cc-ccCCCcEEcC-CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 999999997 566553 66 7789999999 677899999999999998652 899999999999999987653
No 21
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=2.6e-37 Score=282.71 Aligned_cols=291 Identities=16% Similarity=0.208 Sum_probs=215.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEec----CCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEK----ESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQ 85 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
.+||+|||||++|+++|..|++.|++|+|||+ ....||.+.... ....++. ++......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~------~~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPG------FPEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTT------CTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCC------CccCCCHHH
Confidence 47999999999999999999999999999999 445565443211 0111111 122245678
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCC----CcccEeec
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISE----FRGRLLHT 161 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~----~~~~~~~~ 161 (395)
+.+++.+.+.+.+++++.++ |..++... +.|+|++++.++.||+||+||| +.+..|++||.+. +....++.
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~v~~~~~~~~~~~vv~A~G--~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFKLFTDSKAILADAVILAIG--AVAKRLSFVGSGEVLGGFWNRGISA 146 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEEEECSSEEEEEEEEEECCC--EEECCCCCBTCSSSSSCCBTTTEES
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEEEEECCcEEEcCEEEECCC--CCcCCCCCCCccccccccccCcEEE
Confidence 89999999999999988876 88888765 6778887558899999999999 5677888888765 43333443
Q ss_pred CCCCCCcC--CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHH
Q 039923 162 STYKNGVE--FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLL 239 (395)
Q Consensus 162 ~~~~~~~~--~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (395)
....+... ..+++|+|||+|.+|+|+|..|.+.+.+|++++|++ .+.+.
T Consensus 147 ~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~---------------------------- 197 (333)
T 1vdc_A 147 CAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD-AFRAS---------------------------- 197 (333)
T ss_dssp CHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS-SCCSC----------------------------
T ss_pred eccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC-cCCcc----------------------------
Confidence 33222222 578999999999999999999999999999999887 32110
Q ss_pred HhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhH-hhhhcCCeEEecC--ccEEecCe-------EEEe---CC
Q 039923 240 FCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAF-AKIKSGEIKVVPG--IQKFTAKG-------AEFV---NR 306 (395)
Q Consensus 240 ~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~~-------v~~~---~g 306 (395)
..+. +.+++.+|++..+ |.++...+ +.+. +|
T Consensus 198 ------------------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g 241 (333)
T 1vdc_A 198 ------------------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTG 241 (333)
T ss_dssp ------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTC
T ss_pred ------------------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCC
Confidence 0011 1123346666654 66665432 6665 35
Q ss_pred --cEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHH
Q 039923 307 --TVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDI 380 (395)
Q Consensus 307 --~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i 380 (395)
+++++|.||+|+|++|+. .+++ .++. ++++|++.+|+..++|+.|+||++|||+..+. .|+.+|+.+|.+|
T Consensus 242 ~~~~i~~D~vi~a~G~~p~~-~~~~-~~l~-~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 242 DVSDLKVSGLFFAIGHEPAT-KFLD-GGVE-LDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp CEEEEECSEEEECSCEEESC-GGGT-TSSC-BCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEecCEEEEEeCCccch-HHhh-cccc-ccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 579999999999999997 5554 4677 77899999995456899999999999987632 8999999999999
Q ss_pred Hhhhccccc
Q 039923 381 ASQWNSETR 389 (395)
Q Consensus 381 ~~~~~~~~~ 389 (395)
.+.+.++..
T Consensus 319 ~~~l~~~~~ 327 (333)
T 1vdc_A 319 EHYLQEIGS 327 (333)
T ss_dssp HHHHHHC--
T ss_pred HHHHHhccc
Confidence 999976543
No 22
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.8e-37 Score=279.81 Aligned_cols=285 Identities=14% Similarity=0.190 Sum_probs=205.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.|||+||||||+|++||.+|++.|++|+|||+.. .||.+..+ |+ .+.. .......++.+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~~--------------~~~~----~~~~~~~~~~~~ 65 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-SH--------------GFIT----RDGIKPEEFKEI 65 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-BC--------------CSTT----CTTBCHHHHHHH
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-cC--------------CccC----CCCCCHHHHHHH
Confidence 4899999999999999999999999999999974 44432211 11 1110 111345677777
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCc
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGV 168 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 168 (395)
..+.+.+++.......++..+...+. +.|++.+.+ +++.||+|||||| ++|+.|++||.+.+.+..+..+..++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g~~~~a~~liiATG--s~p~~p~i~G~~~~~~~~v~~~~~~~~~ 142 (304)
T 4fk1_A 66 GLNEVMKYPSVHYYEKTVVMITKQST-GLFEIVTKDHTKYLAERVLLATG--MQEEFPSIPNVREYYGKSLFSCPYCDGW 142 (304)
T ss_dssp HHHHHTTSTTEEEEECCEEEEEECTT-SCEEEEETTCCEEEEEEEEECCC--CEEECCSCTTHHHHBTTTEESCHHHHSG
T ss_pred HHHHHHhcCCEEEEeeEEEEeeecCC-CcEEEEECCCCEEEeCEEEEccC--CccccccccCccccccceeeeccccchh
Confidence 77777776655445556666666543 667787776 8999999999999 7899999999776554445555444555
Q ss_pred CCCCCeEEEECCCcC-HHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhcc
Q 039923 169 EFRASKVLVVGCGNS-GMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLG 247 (395)
Q Consensus 169 ~~~~~~v~VvG~G~~-a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
...+++++|||+|.. +.++|..+...+.+|+++.+.+ .+.+.
T Consensus 143 ~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~-~~~~~------------------------------------ 185 (304)
T 4fk1_A 143 ELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN-ELSQT------------------------------------ 185 (304)
T ss_dssp GGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC-CCCHH------------------------------------
T ss_pred HhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc-cchhh------------------------------------
Confidence 567788888888865 5788888888899999887765 22110
Q ss_pred chhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEec-----CeEEEeCCcEecCcEEEEcCCCC
Q 039923 248 DTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTA-----KGAEFVNRTVKEFDSIILATGYR 321 (395)
Q Consensus 248 ~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~-----~~v~~~~g~~i~~D~vi~atG~~ 321 (395)
..+.+++.++.+... ++.+.. ..+.+.+|+++++|.+++++|..
T Consensus 186 ------------------------------~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 186 ------------------------------IMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp ------------------------------HHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEE
T ss_pred ------------------------------hhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccc
Confidence 111112222222222 333322 24788899999999999988888
Q ss_pred CCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhccc
Q 039923 322 SNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNSE 387 (395)
Q Consensus 322 ~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~~ 387 (395)
|+. .++.+++++ +|++|++.+| ++++|+.|||||+|||+..+. .|+.+|+.+|..|.++|..+
T Consensus 236 ~~~-~~~~~~g~~-~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 236 RPN-QFIEQLGCE-LQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp CSS-CHHHHTTCC-CCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-hhhhhcCeE-ECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 876 677888999 8999999999 789999999999999986432 78999999999999998754
No 23
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=5.1e-37 Score=279.14 Aligned_cols=292 Identities=19% Similarity=0.285 Sum_probs=214.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++ .++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWP------GDPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCST------TCCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCC------CCCCCCCHHHHHHH
Confidence 479999999999999999999999999999975 67775533110 00111 11222456788999
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCcC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGVE 169 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 169 (395)
+.+.+.+.+++++.++ |..++... +.|++..++.++.||+||+||| +.+..|.+||.+.+.+..++.....+...
T Consensus 68 ~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~v~~~~~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 142 (320)
T 1trb_A 68 MHEHATKFETEIIFDH-INKVDLQN--RPFRLNGDNGEYTCDALIIATG--ASARYLGLPSEEAFKGRGVSACATSDGFF 142 (320)
T ss_dssp HHHHHHHTTCEEECCC-EEEEECSS--SSEEEEESSCEEEEEEEEECCC--EEECCCCCHHHHHTBTTTEESCHHHHGGG
T ss_pred HHHHHHHCCCEEEEee-eeEEEecC--CEEEEEeCCCEEEcCEEEECCC--CCcCCCCCCChHHhCCceeEecccCCccc
Confidence 9999999999988875 88888765 6777733447899999999999 56778888876554333344433333334
Q ss_pred CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccch
Q 039923 170 FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDT 249 (395)
Q Consensus 170 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (395)
..+++++|||+|.+|+|+|..|.+.|++|++++|++ .+.+.. .+
T Consensus 143 ~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~-------~~---------------------------- 186 (320)
T 1trb_A 143 YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD-GFRAEK-------IL---------------------------- 186 (320)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCCCH-------HH----------------------------
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-ccccCH-------HH----------------------------
Confidence 578999999999999999999999999999999887 332110 00
Q ss_pred hhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe-----EEEeC----C--cEecCcEEEE
Q 039923 250 KQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG-----AEFVN----R--TVKEFDSIIL 316 (395)
Q Consensus 250 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-----v~~~~----g--~~i~~D~vi~ 316 (395)
...+.+.+++.+|++..+ |.++.... +.+.+ | +++++|.||+
T Consensus 187 -------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~ 241 (320)
T 1trb_A 187 -------------------------IKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241 (320)
T ss_dssp -------------------------HHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEE
T ss_pred -------------------------HHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEE
Confidence 011223344456777655 66665443 67765 4 5799999999
Q ss_pred cCCCCCCCCccccccccccccCCCCCCCCCCCC-----CCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhccc
Q 039923 317 ATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKN-----WKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNSE 387 (395)
Q Consensus 317 atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~-----~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~~ 387 (395)
|+|++|+. .+++ .++. ++ +|++.+| +++ +++.|+||++|||+..+. .|+.+|+.+|.+|...|.++
T Consensus 242 a~G~~p~~-~~~~-~~l~-~~-~G~i~vd-~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 316 (320)
T 1trb_A 242 AIGHSPNT-AIFE-GQLE-LE-NGYIKVQ-SGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGL 316 (320)
T ss_dssp CSCEEESC-GGGT-TTSC-EE-TTEECCC-CSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EeCCCCCh-HHhc-cccc-cc-CceEEEC-CCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHhc
Confidence 99999997 5555 4677 67 9999998 443 789999999999997642 89999999999999999876
Q ss_pred cc
Q 039923 388 TR 389 (395)
Q Consensus 388 ~~ 389 (395)
++
T Consensus 317 ~~ 318 (320)
T 1trb_A 317 AD 318 (320)
T ss_dssp --
T ss_pred cc
Confidence 43
No 24
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=6.9e-37 Score=277.50 Aligned_cols=292 Identities=17% Similarity=0.250 Sum_probs=199.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
.+|||+||||||||++||.+|++.|++|+|||+.. .+|.......+ .......++. ++......++.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~G~~~-----~~~~i~~~~g------~~~~i~~~~l~~ 70 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAGGQLT-----TTTIIENFPG------FPNGIDGNELMM 70 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTTCGGG-----GSSEECCSTT------CTTCEEHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccCCCcC-----ChHHhhhccC------CcccCCHHHHHH
Confidence 35899999999999999999999999999999974 33321111000 0111111211 123345678899
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
.+...+.+.+..+... +|....... ..+.+.+.+ .++.||+||+||| +.|+.|++||.+.+.....+....++.
T Consensus 71 ~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~~~~~~~~~~~~~~liiATG--~~~~~~~ipG~~~~~~~~~~~~~~~~~ 145 (314)
T 4a5l_A 71 NMRTQSEKYGTTIITE-TIDHVDFST--QPFKLFTEEGKEVLTKSVIIATG--ATAKRMHVPGEDKYWQNGVSACAICDG 145 (314)
T ss_dssp HHHHHHHHTTCEEECC-CEEEEECSS--SSEEEEETTCCEEEEEEEEECCC--EEECCCCCTTHHHHBTTTEESCHHHHT
T ss_pred HHHHHHhhcCcEEEEe-EEEEeecCC--CceEEEECCCeEEEEeEEEEccc--ccccccCCCccccccccceeeehhhhh
Confidence 9999999988887644 466665555 555566665 8999999999999 788999999977544443444433222
Q ss_pred --cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhh
Q 039923 168 --VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLV 245 (395)
Q Consensus 168 --~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (395)
....+++++|||+|.+|+|+|..|.+.|++||+++|.+ ...+.... .
T Consensus 146 ~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~-~~~~~~~~-------~----------------------- 194 (314)
T 4a5l_A 146 AVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD-AFRASKTM-------Q----------------------- 194 (314)
T ss_dssp TSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCSCHHH-------H-----------------------
T ss_pred hhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc-cccccchh-------h-----------------------
Confidence 23468999999999999999999999999999999877 22211100 0
Q ss_pred ccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec-----CeEEE-----eCCcEecCcE
Q 039923 246 LGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA-----KGAEF-----VNRTVKEFDS 313 (395)
Q Consensus 246 ~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~-----~~v~~-----~~g~~i~~D~ 313 (395)
.+......+..... +.++.. .++.+ .+++++++|.
T Consensus 195 ---------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~ 241 (314)
T 4a5l_A 195 ---------------------------------ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAG 241 (314)
T ss_dssp ---------------------------------HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSE
T ss_pred ---------------------------------hhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeecccc
Confidence 00000111111111 111111 11222 3456899999
Q ss_pred EEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhcc
Q 039923 314 IILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 314 vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~ 386 (395)
|++++|.+|+. .++.. .+. .+++|+++++ +++|+.|||||+|||+..+. .|+.+|+.+|.+|.++|+.
T Consensus 242 vi~a~G~~pn~-~~l~~-~~~-~~~~G~iv~~--~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 242 LFYAIGHSPNS-KFLGG-QVK-TADDGYILTE--GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp EEECSCEEESC-GGGTT-SSC-BCTTSCBCCB--TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEecccccCh-hHhcc-cce-EcCCeeEeCC--CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998 55543 456 6788987544 78999999999999997654 7889999999999998853
No 25
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-35 Score=275.35 Aligned_cols=308 Identities=19% Similarity=0.242 Sum_probs=214.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCcccccccCCcCceeeecCC---ccccCCCCCC--CCC------C
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKESCLASLWKLKIYDHLQLHLPK---QFCQLPYVPF--PRE------Y 77 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~------~ 77 (395)
.+||+|||||++|+++|.+|++.|+ +|+|||+.. +||.|...... ..+..+. ..+.+..... ... .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 3789999999999999999999999 999999998 88877543211 1111111 1111111100 000 0
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCccc
Q 039923 78 PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGR 157 (395)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~ 157 (395)
..++...++..++..++++++++++++++|++++..+ +.|.|++.+.++.||+||+|||.++. |.+|+ +.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~g~~~~d~vVlAtG~~~~---p~ip~-----~~ 151 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIATTTETYHADYIFVATGDYNF---PKKPF-----KY 151 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESSCCEEEEEEEECCCSTTS---BCCCS-----SS
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEEeCCCEEEeCEEEECCCCCCc---cCCCC-----Cc
Confidence 2345678899999999999999999999999999876 57888887767999999999996544 44554 23
Q ss_pred EeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeec-cccCCChhHHHHHHHhhCChhHHHH
Q 039923 158 LLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPK-KILGRSSFAISVWLLKWFPVDVVDR 236 (395)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (395)
..++..+.+.....+++|+|||+|.+|+|+|..|.+.|++|++++|++ .+++. .+... .++...
T Consensus 152 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~-~~~~~~~d~~~-----------~~~~~~--- 216 (369)
T 3d1c_A 152 GIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT-GLNDPDADPSV-----------RLSPYT--- 216 (369)
T ss_dssp CEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------CTT-----------SCCHHH---
T ss_pred eechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC-CCCCCCCCCCc-----------cCCHHH---
Confidence 466666666556678899999999999999999999999999999988 44431 11100 011111
Q ss_pred HHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCC-eEEecC--ccEE--ecC--eEEEeCCcEe
Q 039923 237 FLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGE-IKVVPG--IQKF--TAK--GAEFVNRTVK 309 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~--v~~~--~~~--~v~~~~g~~i 309 (395)
...+.+.+++.+ |++..+ |.++ ++. .+.+.+|+++
T Consensus 217 --------------------------------------~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~ 258 (369)
T 3d1c_A 217 --------------------------------------RQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSV 258 (369)
T ss_dssp --------------------------------------HHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCE
T ss_pred --------------------------------------HHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEe
Confidence 111233344443 777655 6676 333 3677888877
Q ss_pred c-CcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc-------cchhhHHHHHHHHH
Q 039923 310 E-FDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL-------GISMDAHKVADDIA 381 (395)
Q Consensus 310 ~-~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~-------~a~~~g~~~a~~i~ 381 (395)
+ +|.||+|||++|+.. ++.+.++. +++|++.+++..++++.|+||++|||+..+. .+..||..+|++|.
T Consensus 259 ~~~d~vi~a~G~~~~~~-~~~~~~~~--~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~ 335 (369)
T 3d1c_A 259 HTPHEPILATGFDATKN-PIVQQLFV--TTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLT 335 (369)
T ss_dssp EESSCCEECCCBCGGGS-HHHHHHSC--CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHH
T ss_pred ccCCceEEeeccCCccc-hhhhhhcc--CCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHh
Confidence 5 699999999999973 44443443 4789998885567889999999999986543 45688999999999
Q ss_pred hhhc
Q 039923 382 SQWN 385 (395)
Q Consensus 382 ~~~~ 385 (395)
+.+.
T Consensus 336 ~~~~ 339 (369)
T 3d1c_A 336 QREG 339 (369)
T ss_dssp HHTT
T ss_pred cccC
Confidence 8875
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.3e-35 Score=286.05 Aligned_cols=291 Identities=19% Similarity=0.240 Sum_probs=224.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..+||+|||||++|+++|.+|++.|++|+|+|+ .+||.|.... .. + .+.. ..+....++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~--~~----~----~~~~-------~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV--DI----E----NYIS-------VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS--CB----C----CBTT-------BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc--cc----c----ccCC-------CCCCCHHHHHH
Confidence 458999999999999999999999999999986 4677665311 00 0 0000 11245678999
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCC-CCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAA-MGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~-~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
++.+.+++++++++.+++|+.++.... .+.|+|++++ .++.||+||+||| +.++.|.+||.+.+.+..++.+..++
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG--~~~~~~~ipG~~~~~~~~v~~~~~~~ 349 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATG--AKWRNMNVPGEDQYRTKGVTYCPHCD 349 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCC--EEECCCCCTTTTTTTTTTEECCTTCC
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCC--CCcCCCCCCChhhhcCceEEEeecCc
Confidence 999999999999999999999986532 2468888876 6899999999999 56778889998776555455555555
Q ss_pred CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhc
Q 039923 167 GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVL 246 (395)
Q Consensus 167 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.....+++|+|||+|.+|+|+|..|+..+.+|++++|.+ .+.+.
T Consensus 350 ~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~-~l~~~----------------------------------- 393 (521)
T 1hyu_A 350 GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP-EMKAD----------------------------------- 393 (521)
T ss_dssp GGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS-SCCSC-----------------------------------
T ss_pred hhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc-ccCcC-----------------------------------
Confidence 555678999999999999999999999999999999887 33210
Q ss_pred cchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhc-CCeEEecC--ccEEecC-----eEEEeC---Cc--EecCcE
Q 039923 247 GDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKS-GEIKVVPG--IQKFTAK-----GAEFVN---RT--VKEFDS 313 (395)
Q Consensus 247 ~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~-----~v~~~~---g~--~i~~D~ 313 (395)
..+.+.+.+ .+|+++.+ +.++.++ ++.+.+ |+ ++++|.
T Consensus 394 -----------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 444 (521)
T 1hyu_A 394 -----------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAG 444 (521)
T ss_dssp -----------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSE
T ss_pred -----------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCE
Confidence 011222333 46777665 6666543 356654 53 689999
Q ss_pred EEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhccccc
Q 039923 314 IILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 314 vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
|++++|++|+. .++.. .+. ++++|++.+| ++++|+.|||||+|||+..+. .|+.+|..+|.+|..+|.+..+
T Consensus 445 vi~a~G~~pn~-~~l~~-~l~-~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~~~~~ 520 (521)
T 1hyu_A 445 IFVQIGLLPNT-HWLEG-ALE-RNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKI 520 (521)
T ss_dssp EEECCCEEESC-GGGTT-TSC-BCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EEECcCCCCCc-hHHhh-hhc-cCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHHhhhc
Confidence 99999999997 56665 377 7889999999 688899999999999998653 8999999999999999977544
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.6e-36 Score=286.32 Aligned_cols=288 Identities=20% Similarity=0.215 Sum_probs=205.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
++|||||||++|+++|.+|++.| .+|+|||+++..+. ..+- .|......... .........
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~~--l~~~~~~~~~~---~~~~~~~~~----- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF-------ANCA--LPYVIGEVVED---RRYALAYTP----- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB-------CGGG--HHHHHTTSSCC---GGGTBCCCH-----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC-------Ccch--hHHHHcCCccc---hhhhhhcCH-----
Confidence 57999999999999999999988 47999999875432 1100 01000000000 000000111
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc----EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE----YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTY 164 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~----~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~ 164 (395)
+.+.++.+++++.+++|+.++... +.+.+.... .++.||+|||||| ++|+.|+++|...+..........
T Consensus 64 --~~~~~~~~i~~~~~~~V~~id~~~--~~~~~~~~~~~~~~~~~yd~lVIATG--s~p~~p~i~g~~~~~~~~~~~~~~ 137 (437)
T 4eqs_A 64 --EKFYDRKQITVKTYHEVIAINDER--QTVSVLNRKTNEQFEESYDKLILSPG--ASANSLGFESDITFTLRNLEDTDA 137 (437)
T ss_dssp --HHHHHHHCCEEEETEEEEEEETTT--TEEEEEETTTTEEEEEECSEEEECCC--EEECCCCCCCTTEECCSSHHHHHH
T ss_pred --HHHHHhcCCEEEeCCeEEEEEccC--cEEEEEeccCCceEEEEcCEEEECCC--CccccccccCceEEeeccHHHHHH
Confidence 234556699999999999998776 555454332 6799999999999 788888888744321100000000
Q ss_pred CCC--cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhh
Q 039923 165 KNG--VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCS 242 (395)
Q Consensus 165 ~~~--~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (395)
.+. ....+++++|||+|.+|+|+|..+.+.|.+||+++|.+ +++|..+. ..+..
T Consensus 138 l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~-----~~~~~------------------ 193 (437)
T 4eqs_A 138 IDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDA-----DMNQP------------------ 193 (437)
T ss_dssp HHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCG-----GGGHH------------------
T ss_pred HHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccc-----hhHHH------------------
Confidence 000 11247899999999999999999999999999999998 66665443 12211
Q ss_pred hhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEeCCcEecCcEEEEcCCC
Q 039923 243 RLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFVNRTVKEFDSIILATGY 320 (395)
Q Consensus 243 ~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~i~~D~vi~atG~ 320 (395)
+.+.+++.+|+++.+ |+++++..+.+++|+++++|.|++|+|.
T Consensus 194 -----------------------------------~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 194 -----------------------------------ILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp -----------------------------------HHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCE
T ss_pred -----------------------------------HHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEece
Confidence 233333344555544 8888999999999999999999999999
Q ss_pred CCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc-------------cchhhHHHHHHHHHhh
Q 039923 321 RSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL-------------GISMDAHKVADDIASQ 383 (395)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~-------------~a~~~g~~~a~~i~~~ 383 (395)
+|+. .+++..++. +|++|++.+| ++++|+.|||||+|||+..+. .|..||+.+|+||.+.
T Consensus 239 ~Pn~-~~~~~~gl~-~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 239 HPNS-KFIESSNIK-LDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp EESC-GGGTTSSCC-CCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred ecCc-HHHHhhhhh-hccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 9997 678888998 8899999999 788999999999999986432 6889999999999875
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.4e-35 Score=278.40 Aligned_cols=283 Identities=18% Similarity=0.173 Sum_probs=201.6
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+||+|||||++|+++|.+|++. |.+|+|||+++.+|.. .+ ++....... .....++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~--~~---~~~~~~~~~---------------~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL--SG---GLSAYFNHT---------------INELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC--CC----------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCccc--Cc---cchhhhcCC---------------CCCHHHhhc
Confidence 6899999999999999999998 8999999999866511 00 000000000 000011111
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--cEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--EYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
.....+.+++++++++++|+.++... +.+.++.. +.++.||+||+||| +.|..|++||.+. ..+.+...+.+
T Consensus 63 ~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~v~~~~~~~~~~~d~lviAtG--~~p~~p~i~g~~~--~~v~~~~~~~~ 136 (452)
T 3oc4_A 63 ITEEELRRQKIQLLLNREVVAMDVEN--QLIAWTRKEEQQWYSYDKLILATG--ASQFSTQIRGSQT--EKLLKYKFLSG 136 (452)
T ss_dssp CCHHHHHHTTEEEECSCEEEEEETTT--TEEEEEETTEEEEEECSEEEECCC--CCBCCCCCBTTTC--TTEEEGGGCC-
T ss_pred CCHHHHHHCCCEEEECCEEEEEECCC--CEEEEEecCceEEEEcCEEEECCC--cccCCCCCCCCCC--CCEEEeCCHHH
Confidence 12344456788888999999998876 66666422 27899999999999 7899999998764 22344433322
Q ss_pred C-----cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeecc-ccCCChhHHHHHHHhhCChhHHHHHHHH
Q 039923 167 G-----VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKK-ILGRSSFAISVWLLKWFPVDVVDRFLLF 240 (395)
Q Consensus 167 ~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (395)
. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|.. +. .+.
T Consensus 137 ~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~-----~~~------------------ 192 (452)
T 3oc4_A 137 ALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFDK-----EMV------------------ 192 (452)
T ss_dssp ---CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCCH-----HHH------------------
T ss_pred HHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCCH-----HHH------------------
Confidence 2 12368999999999999999999999999999999998 565542 11 111
Q ss_pred hhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEe--cCe--EEEeCCcEecCcEE
Q 039923 241 CSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFT--AKG--AEFVNRTVKEFDSI 314 (395)
Q Consensus 241 ~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~--~~~--v~~~~g~~i~~D~v 314 (395)
..+.+.+++.++++..+ |+++. +.+ +.++++ ++++|.|
T Consensus 193 -----------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~V 236 (452)
T 3oc4_A 193 -----------------------------------AEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSG 236 (452)
T ss_dssp -----------------------------------HHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEE
T ss_pred -----------------------------------HHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEE
Confidence 11233444556666654 66666 223 556666 8999999
Q ss_pred EEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-----------c--cchhhHHHHHHHHH
Q 039923 315 ILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-----------L--GISMDAHKVADDIA 381 (395)
Q Consensus 315 i~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-----------~--~a~~~g~~~a~~i~ 381 (395)
|+|+|++|+. .+++.. +. ++++|++.+| ++++|+.|+|||+|||+..+ . .|..||+.+|++|.
T Consensus 237 v~A~G~~p~~-~~l~~~-~~-~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 237 IFALNLHPQL-AYLDKK-IQ-RNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp EECSCCBCCC-SSCCTT-SC-BCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred EECcCCCCCh-HHHHhh-hc-cCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 9999999998 455544 67 7889999999 78999999999999998653 2 79999999999998
Q ss_pred hh
Q 039923 382 SQ 383 (395)
Q Consensus 382 ~~ 383 (395)
+.
T Consensus 313 g~ 314 (452)
T 3oc4_A 313 EK 314 (452)
T ss_dssp SC
T ss_pred CC
Confidence 75
No 29
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.7e-37 Score=286.38 Aligned_cols=273 Identities=15% Similarity=0.187 Sum_probs=197.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..++|+|||||+||+++|..|...+.+|+|||+++.++ |....+ +..+. .....+++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~l--~~~l~------------g~~~~~~l~~ 66 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPRL--NEIIA------------KNKSIDDILI 66 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGGH--HHHHH------------SCCCGGGTBS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccChh--hHHHc------------CCCCHHHccC
Confidence 35899999999999999999977789999999998654 111110 11000 0011122222
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
+..+++++++++++++++|++++... +. |++++ +++.||+||+||| ++|+.|++||.+ .+.+.....+.
T Consensus 67 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~--v~~~~g~~~~yd~lvlAtG--~~p~~p~i~G~~----~v~~~~~~~d~ 136 (385)
T 3klj_A 67 KKNDWYEKNNIKVITSEFATSIDPNN--KL--VTLKSGEKIKYEKLIIASG--SIANKIKVPHAD----EIFSLYSYDDA 136 (385)
T ss_dssp SCHHHHHHTTCEEECSCCEEEEETTT--TE--EEETTSCEEECSEEEECCC--EEECCCCCTTCS----CEECCSSHHHH
T ss_pred CCHHHHHHCCCEEEeCCEEEEEECCC--CE--EEECCCCEEECCEEEEecC--CCcCCCCCCCCC----CeEEeCCHHHH
Confidence 33445567799999999999998766 43 67666 7899999999999 789999999876 22333222221
Q ss_pred cC-----CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhh
Q 039923 168 VE-----FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCS 242 (395)
Q Consensus 168 ~~-----~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (395)
.. ..+++++|||+|.+|+|+|..|++.|++||++++.+ +++++... .....
T Consensus 137 ~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~----~~~~~------------------- 192 (385)
T 3klj_A 137 LKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLD----RDGGL------------------- 192 (385)
T ss_dssp HHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSC----HHHHH-------------------
T ss_pred HHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcC----HHHHH-------------------
Confidence 11 127899999999999999999999999999999998 66554221 01111
Q ss_pred hhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEeCCcEecCcEEEEcCCC
Q 039923 243 RLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFVNRTVKEFDSIILATGY 320 (395)
Q Consensus 243 ~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~i~~D~vi~atG~ 320 (395)
.+.+.+++.+|+++.+ ++++ |+++++|.||+|+|+
T Consensus 193 ----------------------------------~~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~ 229 (385)
T 3klj_A 193 ----------------------------------FLKDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVITAVGV 229 (385)
T ss_dssp ----------------------------------HHHHHHHTTTCEEECSCCGGGC---------HHHHHHSEEEECCCE
T ss_pred ----------------------------------HHHHHHHhCCCEEEeCCEEEEc---------CeEEecCeEEECcCc
Confidence 1233344445666654 4444 668999999999999
Q ss_pred CCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc----c---cchhhHHHHHHHHHhhh
Q 039923 321 RSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL----L---GISMDAHKVADDIASQW 384 (395)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~----~---~a~~~g~~~a~~i~~~~ 384 (395)
+|+. .+++..++. . ++| +.+| .+++|+.|+|||+|||+..+ . .|..||+.+|.+|.+.-
T Consensus 230 ~p~~-~~~~~~gl~-~-~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 230 KPNL-DFIKDTEIA-S-KRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp EECC-GGGTTSCCC-B-SSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ccCh-hhhhhcCCC-c-CCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 9997 678888887 4 456 7777 78899999999999998632 1 79999999999998754
No 30
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=4.7e-35 Score=282.64 Aligned_cols=303 Identities=17% Similarity=0.190 Sum_probs=212.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecCCcc---ccCCCCC-CCCCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLPKQF---CQLPYVP-FPREYPAYPS 82 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~~~~---~~~~~~~-~~~~~~~~~~ 82 (395)
.++||+|||||++|+++|.+|++.|++|+|||++..+||+|.+.. .+...+ .....+ -..+.+. ++.....++.
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 458999999999999999999999999999999988898765321 111000 000000 0011111 1111122334
Q ss_pred HHHHHHHHH-------HHH-----HHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCC
Q 039923 83 GQQFITYME-------AYA-----NHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPG 150 (395)
Q Consensus 83 ~~~~~~~~~-------~~~-----~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g 150 (395)
.+++.+++. ..+ ++.+++++++.+++.++. .. +++.+..+.||+||+||| +.|..|+++|
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~----~~--v~~~g~~~~~d~lViATG--s~p~~p~i~G 193 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN----HT--VEAAGKVFKAKNLILAVG--AGPGTLDVPG 193 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET----TE--EEETTEEEEBSCEEECCC--EECCCCCSTT
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC----CE--EEECCEEEEeCEEEECCC--CCCCCCCCCC
Confidence 667766664 344 566888875667777653 22 555567899999999999 7888899998
Q ss_pred CCCCcccEeecCCCC-CCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhC
Q 039923 151 ISEFRGRLLHTSTYK-NGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWF 229 (395)
Q Consensus 151 ~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (395)
.+.. .+++...+. ......+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++|..+. .+...
T Consensus 194 ~~~~--~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~-----~~~~~----- 260 (523)
T 1mo9_A 194 VNAK--GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIKDN-----ETRAY----- 260 (523)
T ss_dssp TTSB--TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCCSH-----HHHHH-----
T ss_pred cccC--cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccccH-----HHHHH-----
Confidence 7642 234443332 2222234999999999999999999999999999999988 55553221 11111
Q ss_pred ChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--C------
Q 039923 230 PVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--K------ 299 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~------ 299 (395)
+.+.+++.+++++.+ |.++.. +
T Consensus 261 ------------------------------------------------l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~ 292 (523)
T 1mo9_A 261 ------------------------------------------------VLDRMKEQGMEIISGSNVTRIEEDANGRVQAV 292 (523)
T ss_dssp ------------------------------------------------HHHHHHHTTCEEESSCEEEEEEECTTSBEEEE
T ss_pred ------------------------------------------------HHHHHHhCCcEEEECCEEEEEEEcCCCceEEE
Confidence 223333445666554 556643 2
Q ss_pred eEEEeCCc-EecCcEEEEcCCCCCCCCc-cccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHH
Q 039923 300 GAEFVNRT-VKEFDSIILATGYRSNVSS-WLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAH 374 (395)
Q Consensus 300 ~v~~~~g~-~i~~D~vi~atG~~~~~~~-~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~ 374 (395)
.+.+.+|+ ++++|.||+|+|++|+. . +++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+
T Consensus 293 ~v~~~~G~~~i~aD~Vv~A~G~~p~~-~~~l~~~gl~-~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~ 369 (523)
T 1mo9_A 293 VAMTPNGEMRIETDFVFLGLGEQPRS-AELAKILGLD-LGPKGEVLVN-EYLQTSVPNVYAVGDLIGGPMEMFKARKSGC 369 (523)
T ss_dssp EEEETTEEEEEECSCEEECCCCEECC-HHHHHHHTCC-BCTTSCBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHH
T ss_pred EEEECCCcEEEEcCEEEECcCCccCC-ccCHHHcCCc-cCCCCCEEEC-CCCccCCCCEEEEeecCCCcccHHHHHHHHH
Confidence 25667887 89999999999999997 4 67788898 7889999999 788999999999999998654 8999999
Q ss_pred HHHHHHHhh
Q 039923 375 KVADDIASQ 383 (395)
Q Consensus 375 ~~a~~i~~~ 383 (395)
.+|.+|.+.
T Consensus 370 ~aa~~i~g~ 378 (523)
T 1mo9_A 370 YAARNVMGE 378 (523)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999999863
No 31
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=2.2e-35 Score=282.96 Aligned_cols=287 Identities=20% Similarity=0.233 Sum_probs=201.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC---CCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG---VPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g---~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|++.| .+|+|||++..++.... ++........ . .. +++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~-----~~~~~~~~~~------~---~~------~~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGA-----GMALWIGEQI------A---GP------EGL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGG-----GHHHHHTTSS------S---CS------GGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccc-----ccchhhcCcc------C---CH------HHh
Confidence 489999999999999999999998 99999999876542111 0000000000 0 00 001
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--cEEEEeCEEEEeeCCCCCCCCCCCCCCC------CCc---
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--EYEFMCRWLIVATGENEVPVLPKIPGIS------EFR--- 155 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~~~~~~d~lVlAtG~~~~~~~p~~~g~~------~~~--- 155 (395)
.....+.+++.+++++.+++|..++..+ +.+.+..+ +.++.||+||+||| +.|..|++||.+ .|.
T Consensus 95 ~~~~~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~~~~~~~f~~~~ 170 (490)
T 2bc0_A 95 FYSDKEELESLGAKVYMESPVQSIDYDA--KTVTALVDGKNHVETYDKLIFATG--SQPILPPIKGAEIKEGSLEFEATL 170 (490)
T ss_dssp BSCCHHHHHHTTCEEETTCCEEEEETTT--TEEEEEETTEEEEEECSEEEECCC--EEECCCSCBTCCBCTTCTTCCBSS
T ss_pred hhcCHHHHHhCCCEEEeCCEEEEEECCC--CEEEEEeCCcEEEEECCEEEECCC--CCcCCCCCCCcccccccccccccc
Confidence 1111334456789998899999998766 66555422 26799999999999 788888899876 221
Q ss_pred ccEeecCCCCCCc-------CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhh
Q 039923 156 GRLLHTSTYKNGV-------EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKW 228 (395)
Q Consensus 156 ~~~~~~~~~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (395)
..+++...+.+.. ...+++++|||+|.+|+|+|..|++.|.+|++++|++ +++|+... ..+..
T Consensus 171 ~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----~~~~~----- 240 (490)
T 2bc0_A 171 ENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYYD----RDLTD----- 240 (490)
T ss_dssp TTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSC----HHHHH-----
T ss_pred CCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHHH----HHHHH-----
Confidence 1234432221111 1468999999999999999999999999999999988 55552111 01111
Q ss_pred CChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe----EE
Q 039923 229 FPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG----AE 302 (395)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~ 302 (395)
.+.+.+++.+|++..+ |.++..++ +.
T Consensus 241 ------------------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~ 272 (490)
T 2bc0_A 241 ------------------------------------------------LMAKNMEEHGIQLAFGETVKEVAGNGKVEKII 272 (490)
T ss_dssp ------------------------------------------------HHHHHHHTTTCEEEETCCEEEEECSSSCCEEE
T ss_pred ------------------------------------------------HHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEE
Confidence 1233344445666544 66665432 44
Q ss_pred EeCCcEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-----------c--cc
Q 039923 303 FVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-----------L--GI 369 (395)
Q Consensus 303 ~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-----------~--~a 369 (395)
+ +|+++++|.||+|+|++|+. .+++.. +. ++++|++.+| ++++|+.|+|||+|||+..+ . .|
T Consensus 273 ~-~g~~i~~D~Vi~a~G~~p~~-~ll~~~-l~-~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 347 (490)
T 2bc0_A 273 T-DKNEYDVDMVILAVGFRPNT-TLGNGK-ID-LFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNYIALASNA 347 (490)
T ss_dssp E-SSCEEECSEEEECCCEEECC-GGGTTC-SC-BCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHH
T ss_pred E-CCcEEECCEEEECCCCCcCh-HHHHhh-hc-cCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceeecccHHHH
Confidence 4 77899999999999999998 466666 77 7789999999 68899999999999998642 1 79
Q ss_pred hhhHHHHHHHHHhh
Q 039923 370 SMDAHKVADDIASQ 383 (395)
Q Consensus 370 ~~~g~~~a~~i~~~ 383 (395)
..||+.+|++|.+.
T Consensus 348 ~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 348 VRTGIVAAHNACGT 361 (490)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999874
No 32
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.1e-35 Score=290.69 Aligned_cols=288 Identities=18% Similarity=0.232 Sum_probs=205.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
|++|+|||||++|+++|.+|++. +.+|+|||+++.++ |....+ +. + ... ........+.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-------~~~~~l--~~--~-~~~-------~~~~~~~~~~ 61 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-------FANCGL--PY--H-ISG-------EIAQRSALVL 61 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HH--H-HTS-------SSCCGGGGBC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccccCc--hH--H-hcC-------CcCChHHhhc
Confidence 46899999999999999999998 78999999998654 111000 00 0 000 0001223344
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE---cc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT---HE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTST 163 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~---~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~ 163 (395)
++...+.++++++++++++|+.++... +.+.+.. .+ .++.||+||+||| +.|..|++||.+... +.....
T Consensus 62 ~~~~~~~~~~~i~~~~~~~V~~id~~~--~~v~~~~~~~g~~~~~~~d~lviAtG--~~p~~p~ipG~~~~~--v~~~~~ 135 (565)
T 3ntd_A 62 QTPESFKARFNVEVRVKHEVVAIDRAA--KLVTVRRLLDGSEYQESYDTLLLSPG--AAPIVPPIPGVDNPL--THSLRN 135 (565)
T ss_dssp CCHHHHHHHHCCEEETTEEEEEEETTT--TEEEEEETTTCCEEEEECSEEEECCC--EEECCCCCTTCCSTT--EECCSS
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEEecCCCCeEEEECCEEEECCC--CCCCCCCCCCCCCCC--EEEeCC
Confidence 555666777899999999999998876 6666654 22 5899999999999 688899999976422 222222
Q ss_pred CCCC-------cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHH
Q 039923 164 YKNG-------VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDR 236 (395)
Q Consensus 164 ~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (395)
..+. ....+++++|||+|.+|+|+|..+.+.|.+|++++|.+ .++|..+. .+...+
T Consensus 136 ~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l----------- 198 (565)
T 3ntd_A 136 IPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDR-----EMAGFA----------- 198 (565)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCH-----HHHHHH-----------
T ss_pred HHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCH-----HHHHHH-----------
Confidence 1111 11357899999999999999999999999999999998 66664322 121111
Q ss_pred HHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec----------------
Q 039923 237 FLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA---------------- 298 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~---------------- 298 (395)
.+.+++.+++++.+ |.++..
T Consensus 199 ------------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~ 236 (565)
T 3ntd_A 199 ------------------------------------------HQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTA 236 (565)
T ss_dssp ------------------------------------------HHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCT
T ss_pred ------------------------------------------HHHHHHCCCEEEeCCeEEEEeccccccccccccccccc
Confidence 11222233444332 444432
Q ss_pred -----C--eEEEeCCcEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc-------
Q 039923 299 -----K--GAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ------- 364 (395)
Q Consensus 299 -----~--~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~------- 364 (395)
. .+.+.+|+++++|.||+|+|++|+. .+++..++. ++++|++.+| .+++|+.|+|||+|||+.
T Consensus 237 ~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~-~l~~~~g~~-~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g 313 (565)
T 3ntd_A 237 HQHIKGHLSLTLSNGELLETDLLIMAIGVRPET-QLARDAGLA-IGELGGIKVN-AMMQTSDPAIYAVGDAVEEQDFVTG 313 (565)
T ss_dssp TCCTTCEEEEEETTSCEEEESEEEECSCEEECC-HHHHHHTCC-BCTTSSBCCC-TTCBCSSTTEEECGGGBCEEBTTTC
T ss_pred cccCCCcEEEEEcCCCEEEcCEEEECcCCccch-HHHHhCCcc-cCCCCCEEEC-CCcccCCCCEEEeeeeEeeccccCC
Confidence 1 3566788899999999999999997 577777888 8899999999 788999999999999983
Q ss_pred cc----c--cchhhHHHHHHHHHhhh
Q 039923 365 GL----L--GISMDAHKVADDIASQW 384 (395)
Q Consensus 365 ~~----~--~a~~~g~~~a~~i~~~~ 384 (395)
.+ . .|..||+.+|++|.+.-
T Consensus 314 ~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 314 QACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp CEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ceeecccHHHHHHHHHHHHHHhcCCC
Confidence 21 1 68999999999998753
No 33
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.1e-34 Score=277.31 Aligned_cols=303 Identities=15% Similarity=0.107 Sum_probs=206.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCcee-eecCC---ccc--cCCCCCCCCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQ-LHLPK---QFC--QLPYVPFPREYPAYP 81 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~-~~~~~---~~~--~~~~~~~~~~~~~~~ 81 (395)
+++||+|||||++|+++|..|++.|++|+|||+++.+||+|.... .+... +.... ... .+..+..+.. ....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCcc
Confidence 358999999999999999999999999999999989999765321 11000 00000 000 0000000000 0001
Q ss_pred CHHHH-----------HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCC
Q 039923 82 SGQQF-----------ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPK 147 (395)
Q Consensus 82 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~ 147 (395)
+...+ ...+...+++.+++++.++.+ .+ +. ..+.|++.+ +++.||+||+||| +.|..|+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~--~~~~v~~~~gg~~~~~~d~lViAtG--s~p~~p~ 156 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GK--NQVTATKADGGTQVIDTKNILIATG--SEVTPFP 156 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ET--TEEEEECTTSCEEEEEEEEEEECCC--EEECCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cC--CEEEEEecCCCcEEEEeCEEEECCC--CCCCCCC
Confidence 11222 222355666778888777543 33 23 566777654 5799999999999 6888888
Q ss_pred CCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeee-ccccCCChhHHHHHHH
Q 039923 148 IPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILP-KKILGRSSFAISVWLL 226 (395)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p-~~~~~~~~~~~~~~~~ 226 (395)
++|.+.. .+.++...... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++| ..+. .+...
T Consensus 157 i~g~~~~--~v~t~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~-- 225 (474)
T 1zmd_A 157 GITIDED--TIVSSTGALSL-KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGIDM-----EISKN-- 225 (474)
T ss_dssp TCCCCSS--SEECHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSCCH-----HHHHH--
T ss_pred CCCCCcC--cEEcHHHHhhc-cccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCcccCH-----HHHHH--
Confidence 8887542 23444333332 2257999999999999999999999999999999998 6666 2221 11111
Q ss_pred hhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC--e-E
Q 039923 227 KWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--G-A 301 (395)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~-v 301 (395)
+.+.+++.+|+++.+ |.++... + +
T Consensus 226 ---------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~ 254 (474)
T 1zmd_A 226 ---------------------------------------------------FQRILQKQGFKFKLNTKVTGATKKSDGKI 254 (474)
T ss_dssp ---------------------------------------------------HHHHHHHTTCEEECSEEEEEEEECTTSCE
T ss_pred ---------------------------------------------------HHHHHHHCCCEEEeCceEEEEEEcCCceE
Confidence 122333345666554 5666532 2 3
Q ss_pred EE-------eCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cch
Q 039923 302 EF-------VNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GIS 370 (395)
Q Consensus 302 ~~-------~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~ 370 (395)
.+ .+++++++|.||+|+|++|+...+ +++.+++ ++++|++.+| ++++|+.|+|||+|||+..+. .|.
T Consensus 255 ~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~ 332 (474)
T 1zmd_A 255 DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIE-LDPRGRIPVN-TRFQTKIPNIYAIGDVVAGPMLAHKAE 332 (474)
T ss_dssp EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCC-CCTTSCCCCC-TTCBCSSTTEEECGGGSSSCCCHHHHH
T ss_pred EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCc-cCCCCCEEEC-cCCccCCCCEEEeeecCCCCccHHHHH
Confidence 32 356789999999999999998443 5677888 7888999999 678899999999999997654 899
Q ss_pred hhHHHHHHHHHhh
Q 039923 371 MDAHKVADDIASQ 383 (395)
Q Consensus 371 ~~g~~~a~~i~~~ 383 (395)
.||+.+|++|.+.
T Consensus 333 ~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 333 DEGIICVEGMAGG 345 (474)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999874
No 34
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.5e-35 Score=281.73 Aligned_cols=294 Identities=15% Similarity=0.180 Sum_probs=195.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
++||+|||||++|+++|..|++. |.+|+|||+++.++ |.....+. .....+.. .. ...+...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~---~~~g~~~~------~~--~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY---YVSGEVSN------IE--SLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch---hhcCCCCc------hH--Hhccccchhc
Confidence 36899999999999999999999 89999999998654 11100000 00000000 00 0001112245
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--c--EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--E--YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTST 163 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~--~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~ 163 (395)
.+.+.+.++.+++++++++|+.++... +.+.+... + ..+.||+||+||| +.|..|++||.+. ..+.+...
T Consensus 70 ~~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~~~~~~~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~--~~v~~~~~ 143 (472)
T 3iwa_A 70 RDPEFFRINKDVEALVETRAHAIDRAA--HTVEIENLRTGERRTLKYDKLVLALG--SKANRPPVEGMDL--AGVTPVTN 143 (472)
T ss_dssp -----------CEEECSEEEEEEETTT--TEEEEEETTTCCEEEEECSEEEECCC--EEECCCSCTTTTS--BTEEECCS
T ss_pred cCHHHHhhhcCcEEEECCEEEEEECCC--CEEEEeecCCCCEEEEECCEEEEeCC--CCcCCCCCCCCCC--CCEEEeCC
Confidence 566667767899999999999998876 67666651 2 4899999999999 7888899998762 22333322
Q ss_pred CCCCc-------CCCCCeEEEECCCcCHHHHHHHHhhC-CCeEEEEEecCceeeec-cccCCChhHHHHHHHhhCChhHH
Q 039923 164 YKNGV-------EFRASKVLVVGCGNSGMEISFDLCKN-GAQVSLVVRDKVHILPK-KILGRSSFAISVWLLKWFPVDVV 234 (395)
Q Consensus 164 ~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~-g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (395)
..+.. ...+++++|||+|.+|+|+|..+.+. |.+|+++.+.+ .++|+ .+. .+.
T Consensus 144 ~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~------------ 205 (472)
T 3iwa_A 144 LDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTSK-----SLS------------ 205 (472)
T ss_dssp HHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSCH-----HHH------------
T ss_pred HHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccCH-----HHH------------
Confidence 21111 13478999999999999999999999 99999999988 56552 211 111
Q ss_pred HHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec-Ce---EEEeCCcE
Q 039923 235 DRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA-KG---AEFVNRTV 308 (395)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~-~~---v~~~~g~~ 308 (395)
..+.+.+++.+++++.+ |+++.. ++ +.+.+|++
T Consensus 206 -----------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~ 244 (472)
T 3iwa_A 206 -----------------------------------------QMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRT 244 (472)
T ss_dssp -----------------------------------------HHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCE
T ss_pred -----------------------------------------HHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCE
Confidence 11233344445666654 666654 22 67789999
Q ss_pred ecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc-------cc------ccchhhHHH
Q 039923 309 KEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ-------GL------LGISMDAHK 375 (395)
Q Consensus 309 i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-------~~------~~a~~~g~~ 375 (395)
+++|.||+|+|++|+. .+++..++. ++++|++.+| .+++|+.|+|||+|||+. .+ ..|..||+.
T Consensus 245 i~aD~Vv~a~G~~p~~-~l~~~~gl~-~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 321 (472)
T 3iwa_A 245 LDADLVILAAGVSPNT-QLARDAGLE-LDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRV 321 (472)
T ss_dssp EECSEEEECSCEEECC-HHHHHHTCC-BCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHH
T ss_pred EEcCEEEECCCCCcCH-HHHHhCCcc-CCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHH
Confidence 9999999999999997 577777888 8889999999 788899999999999983 21 168999999
Q ss_pred HHHHHHhhh
Q 039923 376 VADDIASQW 384 (395)
Q Consensus 376 ~a~~i~~~~ 384 (395)
+|++|.+.-
T Consensus 322 aa~~i~g~~ 330 (472)
T 3iwa_A 322 IGTNLADGD 330 (472)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhcCCC
Confidence 999998753
No 35
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.2e-35 Score=276.86 Aligned_cols=283 Identities=19% Similarity=0.210 Sum_probs=200.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCC--EEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVP--SLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~--v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
+++|+|||||++|+++|..|+++|.+ |+|||+++..+ |.... .+..+...... +... ...
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~--l~~~~~~g~~~--~~~~--~~~----- 63 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPS--LSKAVLDGSLE--RPPI--LAE----- 63 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGG--GGTHHHHTSSS--SCCB--SSC-----
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCcc--ccHHHhCCCCC--HHHh--cCC-----
Confidence 46899999999999999999999987 99999998654 11100 01111000000 0000 011
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
..+..+.+++++.+++|+.++... . +|++.+ +++.||+||+||| +.|+.|++||.+. ..+.+.....+
T Consensus 64 ---~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~g~~~~~d~lvlAtG--~~p~~~~ipG~~~--~~v~~~~~~~d 132 (410)
T 3ef6_A 64 ---ADWYGEARIDMLTGPEVTALDVQT--R--TISLDDGTTLSADAIVIATG--SRARTMALPGSQL--PGVVTLRTYGD 132 (410)
T ss_dssp ---TTHHHHTTCEEEESCCEEEEETTT--T--EEEETTSCEEECSEEEECCC--EEECCCCCTTTTS--TTEECCCSHHH
T ss_pred ---HHHHHHCCCEEEeCCEEEEEECCC--C--EEEECCCCEEECCEEEEccC--CcccCCCCCCccc--cceEEeccHHH
Confidence 223445699999999999998765 3 366665 7899999999999 6788899998653 12222222211
Q ss_pred C-----cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHh
Q 039923 167 G-----VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFC 241 (395)
Q Consensus 167 ~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (395)
. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++++... ..+..
T Consensus 133 ~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~----~~~~~------------------ 189 (410)
T 3ef6_A 133 VQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVRVLG----RRIGA------------------ 189 (410)
T ss_dssp HHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHHHHC----HHHHH------------------
T ss_pred HHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchhhcC----HHHHH------------------
Confidence 1 12358999999999999999999999999999999988 45443111 01111
Q ss_pred hhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEeCCcEecCcEEE
Q 039923 242 SRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFVNRTVKEFDSII 315 (395)
Q Consensus 242 ~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~~i~~D~vi 315 (395)
.+.+.+++.+|+++.+ |+++..+ ++.+.+|+++++|.||
T Consensus 190 -----------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv 234 (410)
T 3ef6_A 190 -----------------------------------WLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSAL 234 (410)
T ss_dssp -----------------------------------HHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEE
T ss_pred -----------------------------------HHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEE
Confidence 1222333345666544 6777654 5888999999999999
Q ss_pred EcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc------------ccchhhHHHHHHHHHhh
Q 039923 316 LATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL------------LGISMDAHKVADDIASQ 383 (395)
Q Consensus 316 ~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~------------~~a~~~g~~~a~~i~~~ 383 (395)
+|+|++|+. .+++..++. .+ +| +.+| .+++|+.|+|||+|||+..+ ..|..||+.+|++|.+.
T Consensus 235 ~a~G~~p~~-~l~~~~gl~-~~-~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 309 (410)
T 3ef6_A 235 ICVGAEPAD-QLARQAGLA-CD-RG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGK 309 (410)
T ss_dssp ECSCEEECC-HHHHHTTCC-BS-SS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred EeeCCeecH-HHHHhCCCc-cC-Ce-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCC
Confidence 999999997 678888888 55 55 7777 67889999999999998653 27999999999999876
Q ss_pred h
Q 039923 384 W 384 (395)
Q Consensus 384 ~ 384 (395)
-
T Consensus 310 ~ 310 (410)
T 3ef6_A 310 N 310 (410)
T ss_dssp C
T ss_pred C
Confidence 4
No 36
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=4.6e-35 Score=287.30 Aligned_cols=289 Identities=20% Similarity=0.291 Sum_probs=214.4
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHH
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQ 85 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
.++++|+|||||++|+++|.+|++. |.+|+|||+++.++ |....+ +.. ... ........
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~l--p~~---~~g-------~~~~~~~~ 94 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGL--PYY---IGG-------VITERQKL 94 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HHH---HTT-------SSCCGGGG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCC--chh---hcC-------cCCChHHh
Confidence 3458999999999999999999999 88999999998654 111000 000 000 00012233
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--cc--EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeec
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HE--YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHT 161 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~--~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~ 161 (395)
+..+++.++++++++++++++|+.++... +.+.+.. ++ ..+.||+||+||| +.|..|++||..+.. .+...
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v~v~~~~~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~~~-~v~~~ 169 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE--KTITIKNVTTNETYNEAYDVLILSPG--AKPIVPSIPGIEEAK-ALFTL 169 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT--TEEEEEETTTCCEEEEECSEEEECCC--EEECCCCCTTTTTCT-TEEEC
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEeecCCCCEEEEeCCEEEECCC--CCCCCCCCCCcccCC-CeEEe
Confidence 45566777888899999999999998876 6666654 22 4899999999999 788889999974332 23333
Q ss_pred CCCCCCc-------CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHH
Q 039923 162 STYKNGV-------EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVV 234 (395)
Q Consensus 162 ~~~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (395)
....+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++|..+. .+...
T Consensus 170 ~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~---------- 233 (588)
T 3ics_A 170 RNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDY-----EMAAY---------- 233 (588)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHHHH----------
T ss_pred CCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCH-----HHHHH----------
Confidence 3222211 1368999999999999999999999999999999988 66664322 11111
Q ss_pred HHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--CeEEEeCCcEec
Q 039923 235 DRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--KGAEFVNRTVKE 310 (395)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v~~~~g~~i~ 310 (395)
+.+.+++.+++++.+ |++++. .++.+.+|++++
T Consensus 234 -------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~ 270 (588)
T 3ics_A 234 -------------------------------------------VHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQ 270 (588)
T ss_dssp -------------------------------------------HHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEE
T ss_pred -------------------------------------------HHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEE
Confidence 223334445666654 777765 568889999999
Q ss_pred CcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc-------cc----c--cchhhHHHHH
Q 039923 311 FDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ-------GL----L--GISMDAHKVA 377 (395)
Q Consensus 311 ~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-------~~----~--~a~~~g~~~a 377 (395)
+|.||+|+|++|+. .+++..++. ++++|++.+| .+++|+.|+|||+|||+. .+ . .|..||+.+|
T Consensus 271 ~D~Vi~a~G~~p~~-~~l~~~g~~-~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa 347 (588)
T 3ics_A 271 TDMLILAIGVQPES-SLAKGAGLA-LGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLA 347 (588)
T ss_dssp CSEEEECSCEEECC-HHHHHTTCC-BCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHH
T ss_pred cCEEEEccCCCCCh-HHHHhcCce-EcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHH
Confidence 99999999999997 577888898 8889999999 788999999999999983 11 1 7899999999
Q ss_pred HHHHh
Q 039923 378 DDIAS 382 (395)
Q Consensus 378 ~~i~~ 382 (395)
++|.+
T Consensus 348 ~~i~g 352 (588)
T 3ics_A 348 DIIHG 352 (588)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 99987
No 37
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.5e-34 Score=276.06 Aligned_cols=305 Identities=19% Similarity=0.215 Sum_probs=201.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC-CcCceeeecCCcccc-----CCCCCCCCCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK-IYDHLQLHLPKQFCQ-----LPYVPFPREYPAYPS 82 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 82 (395)
+.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|... .++...+..+...+. +..+..... ....+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 102 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA-NPKLN 102 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC-CCEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC-CCccC
Confidence 45899999999999999999999999999999999999976532 111110000000000 000000000 00011
Q ss_pred HHH-----------HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCCC
Q 039923 83 GQQ-----------FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPKI 148 (395)
Q Consensus 83 ~~~-----------~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~~ 148 (395)
-.. +...+....++.+++++.+... . .+. ..+.|.+.+ .++.||+||+||| +.| |.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~--~~~--~~~~v~~~~g~~~~~~~d~lViATG--s~p--~~i 173 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK-V--LGQ--GKVSVTNEKGEEQVLEAKNVVIATG--SDV--AGI 173 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-E--CSS--SEEEEECTTSCEEEEECSEEEECCC--EEC--CCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-E--ecC--CEEEEEeCCCceEEEEeCEEEEccC--CCC--CCC
Confidence 111 2223344555667776655322 1 222 556666544 5899999999999 444 456
Q ss_pred CCCCC-CcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHh
Q 039923 149 PGISE-FRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLK 227 (395)
Q Consensus 149 ~g~~~-~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~ 227 (395)
||.+. +.+..++...........+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+. .+..
T Consensus 174 pg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~---- 243 (491)
T 3urh_A 174 PGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG-----EVAK---- 243 (491)
T ss_dssp TTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH-----HHHH----
T ss_pred CCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH-----HHHH----
Confidence 66652 2222233333333334568999999999999999999999999999999988 56554332 1111
Q ss_pred hCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC--e--E
Q 039923 228 WFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--G--A 301 (395)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~--v 301 (395)
.+.+.+++.+|.+..+ |.++... + +
T Consensus 244 -------------------------------------------------~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v 274 (491)
T 3urh_A 244 -------------------------------------------------QLQRMLTKQGIDFKLGAKVTGAVKSGDGAKV 274 (491)
T ss_dssp -------------------------------------------------HHHHHHHHTTCEEECSEEEEEEEEETTEEEE
T ss_pred -------------------------------------------------HHHHHHHhCCCEEEECCeEEEEEEeCCEEEE
Confidence 1233334445666654 5555432 2 4
Q ss_pred EEeC---C--cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhh
Q 039923 302 EFVN---R--TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMD 372 (395)
Q Consensus 302 ~~~~---g--~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~ 372 (395)
.+.+ | +++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..|
T Consensus 275 ~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~ 352 (491)
T 3urh_A 275 TFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVV-LDSRGRVEID-RHFQTSIAGVYAIGDVVRGPMLAHKAEDE 352 (491)
T ss_dssp EEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCC-BCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHH
T ss_pred EEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCce-ECCCCCEeEC-CCCCCCCCCEEEEEecCCCccchhHHHHH
Confidence 5542 4 579999999999999998545 6777888 8889999999 788999999999999997655 89999
Q ss_pred HHHHHHHHHhhh
Q 039923 373 AHKVADDIASQW 384 (395)
Q Consensus 373 g~~~a~~i~~~~ 384 (395)
|+.+|++|.+..
T Consensus 353 g~~aa~~i~g~~ 364 (491)
T 3urh_A 353 GVAVAEIIAGQA 364 (491)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHcCCC
Confidence 999999998753
No 38
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.9e-35 Score=275.92 Aligned_cols=285 Identities=22% Similarity=0.196 Sum_probs=201.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCC--EEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVP--SLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~--v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
+++||+|||||++|+++|.+|+++|.+ |+|||+++..+. ....+ +..+. ........+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y-------~~~~l--~~~~~-----------~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY-------ERPPL--SKEYL-----------AREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB-------CSGGG--GTTTT-----------TTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc-------CcccC--CHHHH-----------cCCCCHHHh
Confidence 458999999999999999999999986 999999976541 11000 00000 000011112
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCC
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYK 165 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~ 165 (395)
.........+.+++++.+++|+.++... .. +++.+ ..+.||+||+||| +.|+.|++||.+.. .+.......
T Consensus 68 ~~~~~~~~~~~~i~~~~~~~v~~id~~~--~~--v~~~~g~~~~~d~lvlAtG--~~~~~~~i~g~~~~--~v~~~~~~~ 139 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEMKLGAEVVSLDPAA--HT--VKLGDGSAIEYGKLIWATG--GDPRRLSCVGADLA--GVHAVRTKE 139 (415)
T ss_dssp BSSCHHHHHHTTEEEEETCCEEEEETTT--TE--EEETTSCEEEEEEEEECCC--EECCCCBTTSSCCB--TEECCCSHH
T ss_pred ccCCHHHHHHCCcEEEeCCEEEEEECCC--CE--EEECCCCEEEeeEEEEccC--CccCCCCCCCcccc--CEEEEcCHH
Confidence 2222345556799999999999998765 33 66665 7899999999999 78888888886531 122211111
Q ss_pred CC-----cCCC-CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHH
Q 039923 166 NG-----VEFR-ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLL 239 (395)
Q Consensus 166 ~~-----~~~~-~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (395)
+. .... +++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++++...
T Consensus 140 d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~~------------------------- 193 (415)
T 3lxd_A 140 DADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVAG------------------------- 193 (415)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSC-------------------------
T ss_pred HHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhcC-------------------------
Confidence 11 1113 8999999999999999999999999999999988 55443221
Q ss_pred HhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-----eEEEeCCcEecCc
Q 039923 240 FCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-----GAEFVNRTVKEFD 312 (395)
Q Consensus 240 ~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~~g~~i~~D 312 (395)
+.....+.+.+++.+++++.+ |+++... ++.+.+|+++++|
T Consensus 194 --------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD 241 (415)
T 3lxd_A 194 --------------------------------EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPAD 241 (415)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECS
T ss_pred --------------------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcC
Confidence 011111233334445666644 6777643 4788899999999
Q ss_pred EEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc--------------cchhhHHHHHH
Q 039923 313 SIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL--------------GISMDAHKVAD 378 (395)
Q Consensus 313 ~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~--------------~a~~~g~~~a~ 378 (395)
.||+|+|++|+. .+++..++. .+ +| +.+| .+++|+.|+|||+|||+..+. .|..||+.+|+
T Consensus 242 ~Vv~a~G~~p~~-~l~~~~gl~-~~-~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~ 316 (415)
T 3lxd_A 242 IVIVGIGIVPCV-GALISAGAS-GG-NG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAK 316 (415)
T ss_dssp EEEECSCCEESC-HHHHHTTCC-CS-SS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHH
T ss_pred EEEECCCCccCh-HHHHhCCCC-cC-CC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHH
Confidence 999999999997 677888887 44 56 7777 688999999999999986532 58899999999
Q ss_pred HHHhhh
Q 039923 379 DIASQW 384 (395)
Q Consensus 379 ~i~~~~ 384 (395)
+|.+.-
T Consensus 317 ~i~g~~ 322 (415)
T 3lxd_A 317 DICGAP 322 (415)
T ss_dssp HHTTCC
T ss_pred HhcCCC
Confidence 998753
No 39
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=4.4e-35 Score=276.70 Aligned_cols=296 Identities=17% Similarity=0.194 Sum_probs=195.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..++|+|||||++|+++|..|++.|++|+|||+.+.+||.|... + +.+....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------i---------p~~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------I---------PGFKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------S---------CTTTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------C---------CCccCCHHHHH
Confidence 45899999999999999999999999999999999999876531 1 11112246777
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCC-----
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTST----- 163 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~----- 163 (395)
+..+++++.+++++.++.|. .. +++++..+.||+||+|||++ .++.+.+||.+. .+ +.+...
T Consensus 177 ~~~~~l~~~gv~~~~~~~v~--------~~--v~~~~~~~~~d~vvlAtG~~-~~~~~~ipG~~~-~g-v~~a~~~l~~~ 243 (456)
T 2vdc_G 177 RRVKLLADAGVIYHPNFEVG--------RD--ASLPELRRKHVAVLVATGVY-KARDIKAPGSGL-GN-IVAALDYLTTS 243 (456)
T ss_dssp HHHHHHHHTTCEEETTCCBT--------TT--BCHHHHHSSCSEEEECCCCC-EECCTTCSCCTT-TT-EEEHHHHHHHH
T ss_pred HHHHHHHHCCcEEEeCCEec--------cE--EEhhHhHhhCCEEEEecCCC-CCCCCCCCCCcC-CC-cEEHHHHHHHh
Confidence 77888888899998887662 11 33333335799999999952 366778888653 22 222110
Q ss_pred ----CCC--------CcCCCCCeEEEECCCcCHHHHHHHHhhCCC-eEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 164 ----YKN--------GVEFRASKVLVVGCGNSGMEISFDLCKNGA-QVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 164 ----~~~--------~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
+.+ .....+++|+|||+|.+|+|+|..+.+.|. +|+++.|++...+|.... .
T Consensus 244 ~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~-----e---------- 308 (456)
T 2vdc_G 244 NKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQR-----E---------- 308 (456)
T ss_dssp HHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHH-----H----------
T ss_pred hhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHH-----H----------
Confidence 000 123578999999999999999999999987 599999987322332111 0
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCC---eEEecC-ccEEecCe---EEE
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGE---IKVVPG-IQKFTAKG---AEF 303 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~-v~~~~~~~---v~~ 303 (395)
. ..+++.|+.. ..+....+...+++ +.+... ..+.+.++ ...
T Consensus 309 -------~--------~~~~~~Gv~~----------------~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~ 357 (456)
T 2vdc_G 309 -------V--------AHAEEEGVEF----------------IWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQV 357 (456)
T ss_dssp -------H--------HHHHHTTCEE----------------ECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEE
T ss_pred -------H--------HHHHHCCCEE----------------EeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccc
Confidence 0 0112233320 00000000000011 111000 00000000 111
Q ss_pred eCC--cEecCcEEEEcCCCCCCCCc-cccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHH
Q 039923 304 VNR--TVKEFDSIILATGYRSNVSS-WLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVA 377 (395)
Q Consensus 304 ~~g--~~i~~D~vi~atG~~~~~~~-~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a 377 (395)
.+| .++++|.||+|+|++|+... +++.+++. +|++|++.+|+..++|+.|+|||+|||+.++. .|+.+|+.+|
T Consensus 358 ~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~-~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA 436 (456)
T 2vdc_G 358 IEGSEFTVQADLVIKALGFEPEDLPNAFDEPELK-VTRWGTLLVDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAA 436 (456)
T ss_dssp EEEEEEEEECSEEEECSCEECCCHHHHHHSTTSC-BCTTSSBCCCTTTCBCSSTTEEECGGGGSSCCSHHHHHHHHHHHH
T ss_pred cCCcEEEEECCEEEECCCCCCCcchhhcccCCee-ECCCCCEEECCCCCcCCCCCEEEeccccCCchHHHHHHHHHHHHH
Confidence 123 47899999999999998644 77888888 88999999994448899999999999988765 8999999999
Q ss_pred HHHHhhhcccc
Q 039923 378 DDIASQWNSET 388 (395)
Q Consensus 378 ~~i~~~~~~~~ 388 (395)
.+|.++|.++.
T Consensus 437 ~~i~~~L~~~~ 447 (456)
T 2vdc_G 437 EGIHAYAKAKA 447 (456)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhcCC
Confidence 99999997654
No 40
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.8e-36 Score=276.21 Aligned_cols=276 Identities=21% Similarity=0.216 Sum_probs=197.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
..||+|||||++|+++|..|++.| +|+|||+++..+ |....+ +... .. ....+++..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~-------~~~~~l--~~~~---~g---------~~~~~~~~~~ 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY-------YSKPML--SHYI---AG---------FIPRNRLFPY 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC-------CCSTTH--HHHH---TT---------SSCGGGGCSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc-------cccchh--HHHH---hC---------CCCHHHhccC
Confidence 469999999999999999999999 999999987542 110000 0000 00 0111112122
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCcC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGVE 169 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 169 (395)
..+++++.+++++.+++|+.++... . +|+.+++++.||+||+||| ++|..|++||.+ .+.+.....+...
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~~--~--~V~~~g~~~~~d~lViATG--s~p~~p~i~G~~----~v~~~~~~~~~~~ 135 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRGR--K--VVITEKGEVPYDTLVLATG--ARAREPQIKGKE----YLLTLRTIFDADR 135 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETTT--T--EEEESSCEEECSEEEECCC--EEECCCCSBTGG----GEECCCSHHHHHH
T ss_pred CHHHHHhCCcEEEECCEEEEEECCC--C--EEEECCcEEECCEEEECCC--CCCCCCCCCCcC----CEEEEcCHHHHHH
Confidence 2344556799999898999988654 3 3554457899999999999 788888888832 2333322222111
Q ss_pred C-----CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhh
Q 039923 170 F-----RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRL 244 (395)
Q Consensus 170 ~-----~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (395)
. .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++| .+. .+..
T Consensus 136 l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~-----~~~~--------------------- 187 (367)
T 1xhc_A 136 IKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LDE-----ELSN--------------------- 187 (367)
T ss_dssp HHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CCH-----HHHH---------------------
T ss_pred HHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CCH-----HHHH---------------------
Confidence 1 35899999999999999999999999999999988 5555 111 1111
Q ss_pred hccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEeCCcEecCcEEEEcCCCCC
Q 039923 245 VLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFVNRTVKEFDSIILATGYRS 322 (395)
Q Consensus 245 ~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~i~~D~vi~atG~~~ 322 (395)
.+.+.+++.+|++..+ |++++..++.+++|+ +++|.|++|+|++|
T Consensus 188 --------------------------------~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p 234 (367)
T 1xhc_A 188 --------------------------------MIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVP 234 (367)
T ss_dssp --------------------------------HHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEE
T ss_pred --------------------------------HHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCc
Confidence 1233344456777655 777777788898887 99999999999999
Q ss_pred CCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccc----c-c--cchhhHHHHHHHHHhh
Q 039923 323 NVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQG----L-L--GISMDAHKVADDIASQ 383 (395)
Q Consensus 323 ~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~-~--~a~~~g~~~a~~i~~~ 383 (395)
+. .+++..++. .+ +| +.+| ++++|+.|+|||+|||+.. + . .|..||+.+|++|.+.
T Consensus 235 ~~-~ll~~~gl~-~~-~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 235 NV-DLARRSGIH-TG-RG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp CC-HHHHHTTCC-BS-SS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CH-HHHHhCCCC-CC-CC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 98 477888887 44 56 7777 6888999999999999742 1 1 8999999999999874
No 41
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=4e-34 Score=272.69 Aligned_cols=291 Identities=18% Similarity=0.169 Sum_probs=200.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecCC---ccccCCCCCCCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLPK---QFCQLPYVPFPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... .+...+ .... .+...+.. .......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 47999999999999999999999999999999999999876421 111000 0000 00000000 1111112
Q ss_pred HHH------------HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EE--EEeCEEEEeeCCCCCCCCCCCC
Q 039923 85 QFI------------TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YE--FMCRWLIVATGENEVPVLPKIP 149 (395)
Q Consensus 85 ~~~------------~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~--~~~d~lVlAtG~~~~~~~p~~~ 149 (395)
.+. .++...+++.+++++.+ ++..++ . ..+.|.+.+ ++ +.||+||+||| +.|..|++|
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~--~~~~V~~~~g~~~~~~~d~lviAtG--~~p~~p~i~ 150 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P--THVIVKTDEGKEIEAETRYMIIASG--AETAKLRLP 150 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T--TEEEEEETTSCEEEEEEEEEEECCC--EEECCCCCT
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--C--CeEEEEcCCCcEEEEecCEEEECCC--CCccCCCCC
Confidence 222 33344444556666555 565554 2 566677765 45 99999999999 788899999
Q ss_pred CCCCCcccEeecCC---CCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeecc-ccCCChhHHHHHH
Q 039923 150 GISEFRGRLLHTST---YKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKK-ILGRSSFAISVWL 225 (395)
Q Consensus 150 g~~~~~~~~~~~~~---~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~-~~~~~~~~~~~~~ 225 (395)
|.+.+ .+... +.......+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ +++|.. +. .+...+
T Consensus 151 G~~~~----~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~-----~~~~~l 220 (466)
T 3l8k_A 151 GVEYC----LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITLEDQ-----DIVNTL 220 (466)
T ss_dssp TGGGS----BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCCH-----HHHHHH
T ss_pred Cccce----EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCCCCH-----HHHHHH
Confidence 87621 22221 111223367999999999999999999999999999999988 666643 22 111111
Q ss_pred HhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec---Ce
Q 039923 226 LKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA---KG 300 (395)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~---~~ 300 (395)
.. .++ +++..+ |.++.. .+
T Consensus 221 ~~-----------------------------------------------------~l~---v~i~~~~~v~~i~~~~~~~ 244 (466)
T 3l8k_A 221 LS-----------------------------------------------------ILK---LNIKFNSPVTEVKKIKDDE 244 (466)
T ss_dssp HH-----------------------------------------------------HHC---CCEECSCCEEEEEEEETTE
T ss_pred Hh-----------------------------------------------------cCE---EEEEECCEEEEEEEcCCCc
Confidence 11 111 333332 555544 22
Q ss_pred --EEEe--CCc--EecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cch
Q 039923 301 --AEFV--NRT--VKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GIS 370 (395)
Q Consensus 301 --v~~~--~g~--~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~ 370 (395)
+.+. +|+ ++++|.|++|+|++|+.. + ++..++. ++++| +.+| ++++|+.|+|||+|||+..+. .|.
T Consensus 245 v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~-~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~ 320 (466)
T 3l8k_A 245 YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLS-ISKTG-IVVD-ETMKTNIPNVFATGDANGLAPYYHAAV 320 (466)
T ss_dssp EEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCC-BCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCSHHHHH
T ss_pred EEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCce-eCCCC-EeEC-CCccCCCCCEEEEEecCCCCccHhHHH
Confidence 5565 565 799999999999999986 5 7788998 88899 8888 788999999999999998654 899
Q ss_pred hhHHHHHHHHHhh
Q 039923 371 MDAHKVADDIASQ 383 (395)
Q Consensus 371 ~~g~~~a~~i~~~ 383 (395)
.||+.+|++|.+.
T Consensus 321 ~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 321 RMSIAAANNIMAN 333 (466)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999965
No 42
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.2e-34 Score=273.48 Aligned_cols=283 Identities=19% Similarity=0.280 Sum_probs=197.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
++||+|||||++|+++|..|++. +.+|+|||+++.++... +..+.+ .......+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~----------------~~~p~~-----~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP----------------CGIPYV-----VEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC----------------cCCccc-----cCCCCCHHHhh
Confidence 47999999999999999999998 78999999998554211 000000 01111222333
Q ss_pred HHH-HHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCC
Q 039923 88 TYM-EAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE--YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTY 164 (395)
Q Consensus 88 ~~~-~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~--~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~ 164 (395)
.+. +.+.++.+++++.+++|+.++.. .+.+.+++ .++.||+||+||| +.|..|++||.+.. .++.....
T Consensus 62 ~~~~~~~~~~~gi~v~~~~~v~~i~~~----~~~v~~~~g~~~~~~d~lviAtG--~~p~~p~i~G~~~~--~v~~~~~~ 133 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDLHLNAEVIEVDTG----YVRVRENGGEKSYEWDYLVFANG--ASPQVPAIEGVNLK--GVFTADLP 133 (449)
T ss_dssp ----CTHHHHTTCEEETTCEEEEECSS----EEEEECSSSEEEEECSEEEECCC--EEECCCSCBTTTST--TEECSCST
T ss_pred hcCHHHHHHhcCcEEEecCEEEEEecC----CCEEEECCceEEEEcCEEEECCC--CCCCCCCCCCCCCC--CEEEeCCH
Confidence 322 34446789999999999888653 34566665 5899999999999 78888989987542 12222111
Q ss_pred CCC-------cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeec-cccCCChhHHHHHHHhhCChhHHHH
Q 039923 165 KNG-------VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPK-KILGRSSFAISVWLLKWFPVDVVDR 236 (395)
Q Consensus 165 ~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (395)
.+. ....+++++|||+|.+|+|+|..+.+.|.+|++++|.+ ++++. .+. .+..
T Consensus 134 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~------------- 194 (449)
T 3kd9_A 134 PDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDK-----EVTD------------- 194 (449)
T ss_dssp HHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCH-----HHHH-------------
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCH-----HHHH-------------
Confidence 110 12267899999999999999999999999999999988 55554 221 1111
Q ss_pred HHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe---EEEeCCcEecC
Q 039923 237 FLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG---AEFVNRTVKEF 311 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~---v~~~~g~~i~~ 311 (395)
.+.+.+++. +++..+ +.++...+ ..+.++.++++
T Consensus 195 ----------------------------------------~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~ 233 (449)
T 3kd9_A 195 ----------------------------------------ILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKA 233 (449)
T ss_dssp ----------------------------------------HHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEEC
T ss_pred ----------------------------------------HHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEEC
Confidence 122233334 555443 56665442 34668889999
Q ss_pred cEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccc-----------c--ccchhhHHHHHH
Q 039923 312 DSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQG-----------L--LGISMDAHKVAD 378 (395)
Q Consensus 312 D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-----------~--~~a~~~g~~~a~ 378 (395)
|.||+|+|++|+. .+++..++. ++++|++.+| ++++|+.|+|||+|||+.. . ..|..||+.+|+
T Consensus 234 D~Vv~a~G~~p~~-~l~~~~gl~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~ 310 (449)
T 3kd9_A 234 ELVILATGIKPNI-ELAKQLGVR-IGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGS 310 (449)
T ss_dssp SEEEECSCEEECC-HHHHHTTCC-BCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHH
T ss_pred CEEEEeeCCccCH-HHHHhCCcc-CCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHH
Confidence 9999999999997 577888898 8899999999 7889999999999999741 1 189999999999
Q ss_pred HHHhhh
Q 039923 379 DIASQW 384 (395)
Q Consensus 379 ~i~~~~ 384 (395)
+|.+.-
T Consensus 311 ~i~g~~ 316 (449)
T 3kd9_A 311 NIAGKE 316 (449)
T ss_dssp HHTTCC
T ss_pred HhcCCC
Confidence 998753
No 43
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=3.8e-34 Score=268.07 Aligned_cols=280 Identities=18% Similarity=0.167 Sum_probs=198.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGV--PSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
+.+||+|||||++|+++|..|++.|. +|+|||++++++ |.... .+..+..-.. ....
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~--~~~~~~~~~~---~~~~--------- 64 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRPP--LSKDFMAHGD---AEKI--------- 64 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSGG--GGTHHHHHCC---GGGS---------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCCC--CCHHHhCCCc---hhhh---------
Confidence 45899999999999999999999998 599999987654 11100 0010100000 0000
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCC-CCCCCCcccEeecCCC
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKI-PGISEFRGRLLHTSTY 164 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~-~g~~~~~~~~~~~~~~ 164 (395)
+++ .+++.+++++.+++|+.++... . +|++++ .++.||+||+||| +.|..|++ ||.+ .+ +.+....
T Consensus 65 --~~~-~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~g~~~~~d~lviAtG--~~~~~~~i~~G~~--~~-v~~~~~~ 132 (408)
T 2gqw_A 65 --RLD-CKRAPEVEWLLGVTAQSFDPQA--H--TVALSDGRTLPYGTLVLATG--AAPRALPTLQGAT--MP-VHTLRTL 132 (408)
T ss_dssp --BCC-CTTSCSCEEEETCCEEEEETTT--T--EEEETTSCEEECSEEEECCC--EEECCCGGGTTCS--SC-EEECCSH
T ss_pred --hHH-HHHHCCCEEEcCCEEEEEECCC--C--EEEECCCCEEECCEEEECCC--CCCCCCCccCCCC--Cc-EEEECCH
Confidence 000 2345588888898999998654 3 366655 6899999999999 68888888 8875 22 2332221
Q ss_pred CC-----CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHH
Q 039923 165 KN-----GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLL 239 (395)
Q Consensus 165 ~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (395)
.+ .....+++++|||+|.+|+|+|..|.+.|++|+++++.+ +++|+... ..+..
T Consensus 133 ~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----~~~~~---------------- 191 (408)
T 2gqw_A 133 EDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAAP----ATLAD---------------- 191 (408)
T ss_dssp HHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSC----HHHHH----------------
T ss_pred HHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-cccccccC----HHHHH----------------
Confidence 11 112247999999999999999999999999999999998 55553111 01111
Q ss_pred HhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEeCCcEecCcEEEEc
Q 039923 240 FCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFVNRTVKEFDSIILA 317 (395)
Q Consensus 240 ~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~i~~D~vi~a 317 (395)
.+.+.+++.+|+++.+ |.++++..+.+.+|+++++|.||+|
T Consensus 192 -------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a 234 (408)
T 2gqw_A 192 -------------------------------------FVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVG 234 (408)
T ss_dssp -------------------------------------HHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEEC
T ss_pred -------------------------------------HHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEEC
Confidence 1222333445566544 6777644788889999999999999
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-----------c--cchhhHHHHHHHHHhhh
Q 039923 318 TGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-----------L--GISMDAHKVADDIASQW 384 (395)
Q Consensus 318 tG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-----------~--~a~~~g~~~a~~i~~~~ 384 (395)
+|++|+. .+++..++. .+ +| +.+| ++++|+.|+|||+|||+..+ . .|..||+.+|.+|.+..
T Consensus 235 ~G~~p~~-~l~~~~gl~-~~-~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 235 IGVLAND-ALARAAGLA-CD-DG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp SCEEECC-HHHHHHTCC-BS-SS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred cCCCccH-HHHHhCCCC-CC-CC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 9999997 577888888 54 56 8888 68889999999999998653 1 68999999999998754
No 44
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.8e-34 Score=273.63 Aligned_cols=304 Identities=18% Similarity=0.152 Sum_probs=206.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecC---------CccccCCCCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLP---------KQFCQLPYVPFPREY 77 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~---------~~~~~~~~~~~~~~~ 77 (395)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... .+...+ ... ...+..+......++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 358999999999999999999999999999999988998765311 110000 000 000000000000000
Q ss_pred CCCC-C----HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCCCC
Q 039923 78 PAYP-S----GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPKIP 149 (395)
Q Consensus 78 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~~~ 149 (395)
..+. . .+.+...+...+++.+++++.++.+. + +. ..+.+++.+ .++.||+||+||| +.|..|+++
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~v~~~~G~~~~i~~d~lIiAtG--s~p~~p~~~ 157 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SP--SEISVDTIEGENTVVKGKHIIIATG--SDVKSLPGV 157 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ET--TEEEECCSSSCCEEEECSEEEECCC--EEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CEEEEEeCCCceEEEEcCEEEECCC--CCCCCCCCC
Confidence 0000 0 11233344566677799988887553 3 23 556666543 6899999999999 678888888
Q ss_pred CCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhC
Q 039923 150 GISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWF 229 (395)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (395)
|.+.. .+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++++ .++|..+. .+...
T Consensus 158 g~~~~--~v~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-----~~~~~----- 223 (470)
T 1dxl_A 158 TIDEK--KIVSSTGALAL-SEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDA-----EIRKQ----- 223 (470)
T ss_dssp CCCSS--SEECHHHHTTC-SSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----HHHHH-----
T ss_pred CCCcc--cEEeHHHhhhh-hhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccH-----HHHHH-----
Confidence 86531 23444333322 2357999999999999999999999999999999998 56554322 11111
Q ss_pred ChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe----EEE
Q 039923 230 PVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG----AEF 303 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~~ 303 (395)
+.+.+++.+|+++.+ |.++...+ +.+
T Consensus 224 ------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~ 255 (470)
T 1dxl_A 224 ------------------------------------------------FQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTV 255 (470)
T ss_dssp ------------------------------------------------HHHHHHHSSCCEECSEEEEEEECSSSSEEEEE
T ss_pred ------------------------------------------------HHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEE
Confidence 122233334555544 66665432 344
Q ss_pred e---CC--cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHH
Q 039923 304 V---NR--TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAH 374 (395)
Q Consensus 304 ~---~g--~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~ 374 (395)
. +| +++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+
T Consensus 256 ~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~-~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~ 333 (470)
T 1dxl_A 256 EPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVE-TDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLAHKAEEDGV 333 (470)
T ss_dssp EESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCC-BCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCHHHHHHHHH
T ss_pred EecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCc-cCCCCCEeEC-cCCccCCCCEEEEeccCCCCccHHHHHHHHH
Confidence 3 45 689999999999999998443 6777888 7888999999 678899999999999997654 7999999
Q ss_pred HHHHHHHhh
Q 039923 375 KVADDIASQ 383 (395)
Q Consensus 375 ~~a~~i~~~ 383 (395)
.+|.+|.+.
T Consensus 334 ~aa~~i~g~ 342 (470)
T 1dxl_A 334 ACVEYLAGK 342 (470)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHcCC
Confidence 999999874
No 45
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=3.6e-34 Score=274.46 Aligned_cols=299 Identities=17% Similarity=0.180 Sum_probs=202.2
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCcccccccC-CcCceeeecCCc----cccCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-RGVPSLIIE--------KESCLASLWKLK-IYDHLQLHLPKQ----FCQLPYVPFPR 75 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-~g~~v~lie--------~~~~~~g~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 75 (395)
.+||+|||||++|+++|.+|++ .|++|+||| +...+||+|... .+|...+..... ......+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 4799999999999999999999 999999999 356788876531 111100000000 00000110000
Q ss_pred CCC-CCCCHHHHHHH-----------HHHHHHHc-CCccccCceEEEEEEcCCCCcEEEEEc---------cEEEEeCEE
Q 039923 76 EYP-AYPSGQQFITY-----------MEAYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKTH---------EYEFMCRWL 133 (395)
Q Consensus 76 ~~~-~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~~---------~~~~~~d~l 133 (395)
..+ ...+...+.++ +...+++. +++++.++ +..++ . .. |++. ++.+.||+|
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~--v~v~~~~~~~~~~~~~~~~d~l 159 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES--K--NV--VVVRETADPKSAVKERLQADHI 159 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE--T--TE--EEEESSSSTTSCEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee--C--CE--EEEeecCCccCCCCeEEEcCEE
Confidence 000 01122333333 23344566 78876664 44443 2 33 4443 567999999
Q ss_pred EEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhC---CCeEEEEEecCceeee
Q 039923 134 IVATGENEVPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKN---GAQVSLVVRDKVHILP 210 (395)
Q Consensus 134 VlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~V~~~~r~~~~~~p 210 (395)
|+||| +.|..|++||.+. +.+...+... ...+++++|||+|.+|+|+|..|.+. |.+|++++|.+ +++|
T Consensus 160 ViATG--s~p~~p~i~G~~~----~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~~l~ 231 (495)
T 2wpf_A 160 LLATG--SWPQMPAIPGIEH----CISSNEAFYL-PEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN-LILR 231 (495)
T ss_dssp EECCC--EEECCCCCTTGGG----CEEHHHHTTC-SSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS-SSCT
T ss_pred EEeCC--CCcCCCCCCCccc----cccHHHHHhh-hhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC-cccc
Confidence 99999 7888888888742 2333333222 23578999999999999999999999 99999999998 6665
Q ss_pred ccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEe
Q 039923 211 KKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVV 290 (395)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 290 (395)
..+. .+... +.+.+++.+|+++
T Consensus 232 ~~d~-----~~~~~-----------------------------------------------------l~~~l~~~GV~i~ 253 (495)
T 2wpf_A 232 GFDE-----TIREE-----------------------------------------------------VTKQLTANGIEIM 253 (495)
T ss_dssp TSCH-----HHHHH-----------------------------------------------------HHHHHHHTTCEEE
T ss_pred ccCH-----HHHHH-----------------------------------------------------HHHHHHhCCCEEE
Confidence 4322 11111 1223333455555
Q ss_pred cC--ccEEecC-----eEEEeCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEec
Q 039923 291 PG--IQKFTAK-----GAEFVNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFA 362 (395)
Q Consensus 291 ~~--v~~~~~~-----~v~~~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~ 362 (395)
.+ |.++... .+.+.+|+++++|.||+|+|++|+...+ ++..++. ++++|++.+| .+++|+.|+|||+|||
T Consensus 254 ~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~-~~~~G~i~Vd-~~~~t~~~~IyA~GD~ 331 (495)
T 2wpf_A 254 TNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVK-LTPKGGVQVD-EFSRTNVPNIYAIGDI 331 (495)
T ss_dssp ESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCC-BCTTSSBCCC-TTCBCSSTTEEECGGG
T ss_pred eCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCcc-CCCCCCEEEC-CCCccCCCCEEEEecc
Confidence 44 6666532 4677888899999999999999998545 6778898 7889999999 6888999999999999
Q ss_pred ccccc---cchhhHHHHHHHHHhh
Q 039923 363 RQGLL---GISMDAHKVADDIASQ 383 (395)
Q Consensus 363 ~~~~~---~a~~~g~~~a~~i~~~ 383 (395)
+..+. .|..||+.+|.+|.+.
T Consensus 332 ~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 332 TDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp GCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCccCHHHHHHHHHHHHHHhcCC
Confidence 97654 8999999999999863
No 46
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=2.6e-34 Score=275.06 Aligned_cols=299 Identities=17% Similarity=0.216 Sum_probs=201.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC-CcCce-eeecC---CccccCCCCCCCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK-IYDHL-QLHLP---KQFCQLPYVPFPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~-~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|++.|++|+|||++ .+||+|... ..+.. ..... ........+.++.. ....+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 489999999999999999999999999999976 788865431 01100 00000 00001111111111 1112233
Q ss_pred HHHH-----------HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCC---CCCC
Q 039923 85 QFIT-----------YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLP---KIPG 150 (395)
Q Consensus 85 ~~~~-----------~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p---~~~g 150 (395)
.+.+ .+...+++.++++..+. +..++ . ..+.++.+++++.||+||+||| +.|..| ++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~--~~~~v~~~g~~~~~d~lviAtG--~~p~~p~~~~i~G 170 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--D--PKPTIEVSGKKYTAPHILIATG--GMPSTPHESQIPG 170 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--C--SSCEEEETTEEEECSCEEECCC--EEECCCCTTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--C--CeEEEEECCEEEEeeEEEEccC--CCCCCCCcCCCCC
Confidence 3333 33444555677765553 22221 1 3345776668899999999999 788888 8888
Q ss_pred CCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 151 ISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
.+. ..++..+... ...+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|..+. .+...
T Consensus 171 ~~~----~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~~------ 233 (478)
T 3dk9_A 171 ASL----GITSDGFFQL-EELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFDS-----MISTN------ 233 (478)
T ss_dssp GGG----SBCHHHHTTC-CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHHHH------
T ss_pred Cce----eEchHHhhch-hhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccCH-----HHHHH------
Confidence 652 1222222222 2357999999999999999999999999999999988 55554332 11111
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC--e----EE
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--G----AE 302 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~----v~ 302 (395)
+.+.+++.+|+++.+ |.++... + +.
T Consensus 234 -----------------------------------------------~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 266 (478)
T 3dk9_A 234 -----------------------------------------------CTEELENAGVEVLKFSQVKEVKKTLSGLEVSMV 266 (478)
T ss_dssp -----------------------------------------------HHHHHHHTTCEEETTEEEEEEEECSSSEEEEEE
T ss_pred -----------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEE
Confidence 223334445666655 5555422 2 44
Q ss_pred EeC-------CcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchh
Q 039923 303 FVN-------RTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISM 371 (395)
Q Consensus 303 ~~~-------g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~ 371 (395)
+.+ |+++++|.|++|+|++|+...+ ++..++. ++++|++.+| ++++|+.|||||+|||++.+. .|..
T Consensus 267 ~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~ 344 (478)
T 3dk9_A 267 TAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ-TDDKGHIIVD-EFQNTNVKGIYAVGDVCGKALLTPVAIA 344 (478)
T ss_dssp ECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCC-BCTTCCBCCC-TTCBCSSTTEEECGGGGCSSCCHHHHHH
T ss_pred EccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCe-eCCCCCEeeC-CCcccCCCCEEEEEecCCCCccHhHHHH
Confidence 554 2579999999999999998655 7788898 8899999999 788999999999999996655 8999
Q ss_pred hHHHHHHHHHhh
Q 039923 372 DAHKVADDIASQ 383 (395)
Q Consensus 372 ~g~~~a~~i~~~ 383 (395)
||+.+|++|.+.
T Consensus 345 ~g~~aa~~i~~~ 356 (478)
T 3dk9_A 345 AGRKLAHRLFEY 356 (478)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHcCC
Confidence 999999999876
No 47
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5e-34 Score=271.49 Aligned_cols=301 Identities=18% Similarity=0.227 Sum_probs=202.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCcee-eecCC------cc--ccCCCCCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQ-LHLPK------QF--CQLPYVPFPREYPA 79 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~-~~~~~------~~--~~~~~~~~~~~~~~ 79 (395)
++||+|||||++|+++|.+|++.|++|+|||++ .+||+|.... .+... +.... .+ ...+......++..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999999999999999998 7887654210 11000 00000 00 00000000000000
Q ss_pred CCC-----HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--EEEEeCEEEEeeCCCCCCCCCCCCCCC
Q 039923 80 YPS-----GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE--YEFMCRWLIVATGENEVPVLPKIPGIS 152 (395)
Q Consensus 80 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~--~~~~~d~lVlAtG~~~~~~~p~~~g~~ 152 (395)
... .+.+.+.+...+++.+++++.++.+. + +. +.+.+++.+ .++.||+||+||| +.|..|+++|.+
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~G~~~i~~d~lViATG--s~p~~~~~~g~~ 154 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTVRVVNGDSAQTYTFKNAIIATG--SRPIELPNFKFS 154 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET--TEEEEEETTEEEEEECSEEEECCC--EEECCBTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeEEEEeCCCcEEEEeCEEEEecC--CCCCCCCCCCcc
Confidence 000 11233445666777789888776543 3 23 567777654 5799999999999 678888888765
Q ss_pred CCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChh
Q 039923 153 EFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVD 232 (395)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (395)
. .+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+. .+...
T Consensus 155 ~---~v~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~-------- 216 (455)
T 1ebd_A 155 N---RILDSTGALNL-GEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEK-----QMAAI-------- 216 (455)
T ss_dssp S---SEECHHHHHTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH-----HHHHH--------
T ss_pred c---eEecHHHHhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCH-----HHHHH--------
Confidence 3 23333332222 2257999999999999999999999999999999988 56553221 11111
Q ss_pred HHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC--e--EEEe--
Q 039923 233 VVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--G--AEFV-- 304 (395)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~--v~~~-- 304 (395)
+.+.+++.+++++.+ |.++... + +.+.
T Consensus 217 ---------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~ 251 (455)
T 1ebd_A 217 ---------------------------------------------IKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEAN 251 (455)
T ss_dssp ---------------------------------------------HHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEET
T ss_pred ---------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeC
Confidence 122233345555544 5666532 2 3333
Q ss_pred -CCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHH
Q 039923 305 -NRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADD 379 (395)
Q Consensus 305 -~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~ 379 (395)
+++++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+.+|++
T Consensus 252 g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~-~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~ 329 (455)
T 1ebd_A 252 GETKTIDADYVLVTVGRRPNTDELGLEQIGIK-MTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEA 329 (455)
T ss_dssp TEEEEEEESEEEECSCEEESCSSSSTTTTTCC-BCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHH
T ss_pred CceeEEEcCEEEECcCCCcccCcCChhhcCCc-cCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHH
Confidence 45689999999999999998443 6777888 7888999999 678899999999999987654 799999999999
Q ss_pred HHhh
Q 039923 380 IASQ 383 (395)
Q Consensus 380 i~~~ 383 (395)
|.+.
T Consensus 330 i~~~ 333 (455)
T 1ebd_A 330 IAGH 333 (455)
T ss_dssp HTSC
T ss_pred HcCC
Confidence 9864
No 48
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2e-34 Score=273.45 Aligned_cols=297 Identities=16% Similarity=0.164 Sum_probs=198.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecC---Cccc-cCCCCCCCCCCCCCCCH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLP---KQFC-QLPYVPFPREYPAYPSG 83 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~---~~~~-~~~~~~~~~~~~~~~~~ 83 (395)
++||+|||||++|+++|.+|++.|++|+|||++ .+||+|.... .|...+ ... ..+- ....+.+... ....+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccCH
Confidence 479999999999999999999999999999998 6788764210 000000 000 0000 0000000000 000111
Q ss_pred HHH-----------HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCC
Q 039923 84 QQF-----------ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGIS 152 (395)
Q Consensus 84 ~~~-----------~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~ 152 (395)
..+ ...+...+++.+++++.++ +..++ . .. |+++++++.||+||+||| +.|..|++||.+
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i~--~--~~--v~~~g~~~~~d~lviAtG--s~p~~p~i~g~~ 152 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFVD--A--KT--LEVNGETITADHILIATG--GRPSHPDIPGVE 152 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CEEEE--T--TE--EEETTEEEEEEEEEECCC--EEECCCCSTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEec--C--CE--EEECCEEEEeCEEEECCC--CCCCCCCCCCcc
Confidence 222 2233444566788877664 33443 2 33 555558899999999999 788888888864
Q ss_pred CCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChh
Q 039923 153 EFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVD 232 (395)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (395)
. ..+...+... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+. .+...
T Consensus 153 ~----~~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~-------- 213 (450)
T 1ges_A 153 Y----GIDSDGFFAL-PALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDP-----MISET-------- 213 (450)
T ss_dssp G----SBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHH--------
T ss_pred c----eecHHHhhhh-hhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhH-----HHHHH--------
Confidence 2 1222221111 2357899999999999999999999999999999988 55543221 11111
Q ss_pred HHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-----eEEEeC
Q 039923 233 VVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-----GAEFVN 305 (395)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~~ 305 (395)
+.+.+++.+++++.+ |.++... .+.+.+
T Consensus 214 ---------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~ 248 (450)
T 1ges_A 214 ---------------------------------------------LVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELED 248 (450)
T ss_dssp ---------------------------------------------HHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETT
T ss_pred ---------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECC
Confidence 122222334555544 5565432 467778
Q ss_pred CcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHHHH
Q 039923 306 RTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADDIA 381 (395)
Q Consensus 306 g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~i~ 381 (395)
|+++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+.+|.+|.
T Consensus 249 g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~-~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 326 (450)
T 1ges_A 249 GRSETVDCLIWAIGREPANDNINLEAAGVK-TNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLF 326 (450)
T ss_dssp SCEEEESEEEECSCEEESCTTSCHHHHTCC-BCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEcCEEEECCCCCcCCCCCCchhcCce-ECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHc
Confidence 8899999999999999998545 6777888 7889999999 678899999999999987544 89999999999998
Q ss_pred hh
Q 039923 382 SQ 383 (395)
Q Consensus 382 ~~ 383 (395)
+.
T Consensus 327 ~~ 328 (450)
T 1ges_A 327 NN 328 (450)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 49
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-34 Score=275.17 Aligned_cols=296 Identities=17% Similarity=0.190 Sum_probs=194.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeec----CCccccCCCCCCCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHL----PKQFCQLPYVPFPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
++||+|||||++|+++|.+|++.|++|+|||+. .+||+|.... .+...+.. .........+.+... ......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 589999999999999999999999999999998 5788765321 11100000 000000000110000 011112
Q ss_pred -----------HHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE-----------c-cEEEEeCEEEEeeCCCC
Q 039923 85 -----------QFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT-----------H-EYEFMCRWLIVATGENE 141 (395)
Q Consensus 85 -----------~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~-----------~-~~~~~~d~lVlAtG~~~ 141 (395)
.+...+...+++.+++++.++.+ .++. ..+++.. . +.++.||+||+||| +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~id~----~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtG--s 151 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTAS-FLSE----NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVG--N 151 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCC-CC------------------------------CBSSEEECCC--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-EeeC----CEEEEEeccccccccccCCCceEEEeCEEEECCC--C
Confidence 22333445556778887666432 2221 3333432 1 35799999999999 7
Q ss_pred CCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHH
Q 039923 142 VPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAI 221 (395)
Q Consensus 142 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~ 221 (395)
.|..|++||.+. ..++..+..... +++++|||+|.+|+|+|..|.+.|.+|++++|.+ +++|..+. .+
T Consensus 152 ~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~ 219 (500)
T 1onf_A 152 KPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RILRKFDE-----SV 219 (500)
T ss_dssp CBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SSCTTSCH-----HH
T ss_pred CCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-ccCcccch-----hh
Confidence 888888988742 234333333222 8899999999999999999999999999999988 66654332 11
Q ss_pred HHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC
Q 039923 222 SVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK 299 (395)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~ 299 (395)
... +.+.+++.+|+++.+ |.++...
T Consensus 220 ~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 220 INV-----------------------------------------------------LENDMKKNNINIVTFADVVEIKKV 246 (500)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTTCEEECSCCEEEEEES
T ss_pred HHH-----------------------------------------------------HHHHHHhCCCEEEECCEEEEEEEc
Confidence 111 223333445666554 6666532
Q ss_pred -----eEEEeCCcE-ecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecc---------
Q 039923 300 -----GAEFVNRTV-KEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFAR--------- 363 (395)
Q Consensus 300 -----~v~~~~g~~-i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~--------- 363 (395)
.+.+.+|++ +++|.||+|+|++|+...+ ++..++. + ++|++.+| ++++|+.|+|||+|||+
T Consensus 247 ~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~-~-~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~~ 323 (500)
T 1onf_A 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVE-T-NNNYIVVD-ENQRTSVNNIYAVGDCCMVKKSKEIE 323 (500)
T ss_dssp STTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCC-B-SSSCEEEC-TTCBCSSSSEEECSTTEEEC------
T ss_pred CCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCcc-c-cCCEEEEC-CCcccCCCCEEEEecccccccccccc
Confidence 366778887 9999999999999998555 6788898 5 78999998 67889999999999998
Q ss_pred -------------------------cccc---cchhhHHHHHHHHHhh
Q 039923 364 -------------------------QGLL---GISMDAHKVADDIASQ 383 (395)
Q Consensus 364 -------------------------~~~~---~a~~~g~~~a~~i~~~ 383 (395)
..+. .|..||+.+|++|.+.
T Consensus 324 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 324 DLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp ------------------------CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCC
Confidence 2222 7999999999999863
No 50
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=4.3e-34 Score=272.88 Aligned_cols=303 Identities=16% Similarity=0.164 Sum_probs=203.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeecCC----c----c--ccCCC-CCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHLPK----Q----F--CQLPY-VPFPREY 77 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~~~----~----~--~~~~~-~~~~~~~ 77 (395)
++||+|||||++|+++|.+|++.|++|+|||+++.+||+|.... .+...+.... . + +..+. .....++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999988998765321 1100000000 0 0 00000 0000000
Q ss_pred CCCCC-----HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCCCC
Q 039923 78 PAYPS-----GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPKIP 149 (395)
Q Consensus 78 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~~~ 149 (395)
..... .+.+...+...+++.+++++.++.+ .++ . ..+.+.+.+ .++.||+||+||| +.|..|+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~--~--~~~~v~~~~G~~~~~~~d~lviAtG--~~p~~p~~~ 154 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FET--A--HSIRVNGLDGKQEMLETKKTIIATG--SEPTELPFL 154 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEE--T--TEEEEEETTSCEEEEEEEEEEECCC--EEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eee--C--CEEEEEecCCceEEEEcCEEEECCC--CCcCCCCCC
Confidence 00000 0112333456666778888777543 232 2 556676643 6899999999999 678888888
Q ss_pred CCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhC
Q 039923 150 GISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWF 229 (395)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (395)
|.+.. .+.+....... ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|..+. .+.
T Consensus 155 g~~~~--~v~t~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~------- 218 (468)
T 2qae_A 155 PFDEK--VVLSSTGALAL-PRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDE-----DVT------- 218 (468)
T ss_dssp CCCSS--SEECHHHHHTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHH-------
T ss_pred CCCcC--ceechHHHhhc-ccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCH-----HHH-------
Confidence 86531 23333332222 2357999999999999999999999999999999998 56654322 111
Q ss_pred ChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhh-hcCCeEEecC--ccEEecC----eEE
Q 039923 230 PVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKI-KSGEIKVVPG--IQKFTAK----GAE 302 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~----~v~ 302 (395)
..+.+.+ ++.+++++.+ |.++... .+.
T Consensus 219 ----------------------------------------------~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~ 252 (468)
T 2qae_A 219 ----------------------------------------------NALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLE 252 (468)
T ss_dssp ----------------------------------------------HHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEE
T ss_pred ----------------------------------------------HHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEE
Confidence 1123333 4445666654 6666542 244
Q ss_pred Ee--CC--cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc-ccc---cchhhH
Q 039923 303 FV--NR--TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ-GLL---GISMDA 373 (395)
Q Consensus 303 ~~--~g--~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-~~~---~a~~~g 373 (395)
+. +| +++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+. .+. .|..||
T Consensus 253 ~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g 330 (468)
T 2qae_A 253 VEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVA-KNERGFVKIG-DHFETSIPDVYAIGDVVDKGPMLAHKAEDEG 330 (468)
T ss_dssp EECC---EEEEEESEEEECSCEEECCTTSCHHHHTCC-BCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSCHHHHHHHH
T ss_pred EEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCc-cCCCCCEeEC-CCcccCCCCEEEeeccCCCCCccHhHHHHHH
Confidence 54 66 679999999999999998433 5677888 7888999999 778999999999999998 544 899999
Q ss_pred HHHHHHHHhh
Q 039923 374 HKVADDIASQ 383 (395)
Q Consensus 374 ~~~a~~i~~~ 383 (395)
+.+|.+|.+.
T Consensus 331 ~~aa~~i~~~ 340 (468)
T 2qae_A 331 VACAEILAGK 340 (468)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999874
No 51
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.2e-34 Score=273.72 Aligned_cols=306 Identities=16% Similarity=0.151 Sum_probs=208.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCcccccccCC-cCceeeecCC----ccccCCCCCCCC-CCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER---GVPSLIIEKESCLASLWKLKI-YDHLQLHLPK----QFCQLPYVPFPR-EYPAY 80 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~---g~~v~lie~~~~~~g~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~-~~~~~ 80 (395)
.+||+|||||++|+++|.+|++. |++|+|||++. +||++.... .+...+.... ....+..+.++. .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999999 99999999998 888654321 1110000000 000011111100 00001
Q ss_pred CCHHH-----------HHHHHHHHHHHcCCccccCceEEEEEEcC--CCCcEEEEEcc-E--EEEeCEEEEeeCCCCCCC
Q 039923 81 PSGQQ-----------FITYMEAYANHFEIEPLLGQEVQWAKYDA--AMGHWRVKTHE-Y--EFMCRWLIVATGENEVPV 144 (395)
Q Consensus 81 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~V~~v~~~~--~~~~~~v~~~~-~--~~~~d~lVlAtG~~~~~~ 144 (395)
.+... +...+...+++.+++++.++ +..++..+ ..+.+.|.+++ . .+.||+||+||| +.|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATG--s~p~ 157 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATG--ASPR 157 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCC--EEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCC--CCCC
Confidence 12222 33345666777889887774 55554310 01445565544 3 799999999999 7888
Q ss_pred CCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHH
Q 039923 145 LPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVW 224 (395)
Q Consensus 145 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 224 (395)
.|+++|.+.. .+.+.....+. ...+++++|||+|.+|+|+|..+...|.+|+++++.+ +++|..+. .+...
T Consensus 158 ~p~i~g~~~~--~v~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~~ 228 (499)
T 1xdi_A 158 ILPSAQPDGE--RILTWRQLYDL-DALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPYEDA-----DAALV 228 (499)
T ss_dssp CCGGGCCCSS--SEEEGGGGGGC-SSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCCSSH-----HHHHH
T ss_pred CCCCCCCCcC--cEEehhHhhhh-hccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----HHHHH
Confidence 8888887642 23444443332 2357899999999999999999999999999999998 66664322 11111
Q ss_pred HHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC---
Q 039923 225 LLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--- 299 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--- 299 (395)
+.+.+++.++++..+ |+++...
T Consensus 229 -----------------------------------------------------l~~~l~~~GV~i~~~~~V~~i~~~~~~ 255 (499)
T 1xdi_A 229 -----------------------------------------------------LEESFAERGVRLFKNARAASVTRTGAG 255 (499)
T ss_dssp -----------------------------------------------------HHHHHHHTTCEEETTCCEEEEEECSSS
T ss_pred -----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEeCCE
Confidence 223333445556544 6666543
Q ss_pred -eEEEeCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHH
Q 039923 300 -GAEFVNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAH 374 (395)
Q Consensus 300 -~v~~~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~ 374 (395)
.+.+.+|+++++|.||+|+|.+|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+
T Consensus 256 v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~-~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~ 333 (499)
T 1xdi_A 256 VLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQ-LGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLASVAAMQGR 333 (499)
T ss_dssp EEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCC-CBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCHHHHHHHHH
T ss_pred EEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCce-ECCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHH
Confidence 2455678899999999999999998433 6777888 7888999999 678999999999999998755 7999999
Q ss_pred HHHHHHHhh
Q 039923 375 KVADDIASQ 383 (395)
Q Consensus 375 ~~a~~i~~~ 383 (395)
.+|++|.+.
T Consensus 334 ~aa~~i~g~ 342 (499)
T 1xdi_A 334 IAMYHALGE 342 (499)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhcCC
Confidence 999999874
No 52
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.5e-33 Score=269.90 Aligned_cols=298 Identities=15% Similarity=0.163 Sum_probs=203.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecCC---c--cccCCCCCCCCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLPK---Q--FCQLPYVPFPREYPAYPS 82 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~~---~--~~~~~~~~~~~~~~~~~~ 82 (395)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||++.... .+...+ .... . .......++. .....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~---~~~~~ 82 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP---EPELD 82 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC---CCccC
Confidence 47999999999999999999999999999999888888653210 110000 0000 0 0000011110 01112
Q ss_pred HHHHH-----------HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc-c------------EEEEeCEEEEeeC
Q 039923 83 GQQFI-----------TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH-E------------YEFMCRWLIVATG 138 (395)
Q Consensus 83 ~~~~~-----------~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~-~------------~~~~~d~lVlAtG 138 (395)
...+. ..+...+++.+++++.++.+. .++ +.+.+++. + .++.||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtG 157 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAG 157 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCC
Confidence 22222 234456667788887776543 222 55666532 2 5799999999999
Q ss_pred CCCCCCCCC-CCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCC
Q 039923 139 ENEVPVLPK-IPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRS 217 (395)
Q Consensus 139 ~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~ 217 (395)
+.|..|+ ++ .+. .+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+.
T Consensus 158 --s~p~~~~~i~-~~~---~v~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~--- 226 (482)
T 1ojt_A 158 --SRVTKLPFIP-EDP---RIIDSSGALAL-KEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GLMQGADR--- 226 (482)
T ss_dssp --EEECCCSSCC-CCT---TEECHHHHTTC-CCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH---
T ss_pred --CCCCCCCCCC-ccC---cEEcHHHHhcc-cccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-ccccccCH---
Confidence 5677665 55 222 23443333222 2258999999999999999999999999999999998 66664322
Q ss_pred hhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccE
Q 039923 218 SFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQK 295 (395)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~ 295 (395)
.+... +.+.+++.+|+++.+ |.+
T Consensus 227 --~~~~~-----------------------------------------------------l~~~l~~~gV~i~~~~~v~~ 251 (482)
T 1ojt_A 227 --DLVKV-----------------------------------------------------WQKQNEYRFDNIMVNTKTVA 251 (482)
T ss_dssp --HHHHH-----------------------------------------------------HHHHHGGGEEEEECSCEEEE
T ss_pred --HHHHH-----------------------------------------------------HHHHHHhcCCEEEECCEEEE
Confidence 11111 223334446666655 666
Q ss_pred EecC----eEEEeC----CcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc
Q 039923 296 FTAK----GAEFVN----RTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL 366 (395)
Q Consensus 296 ~~~~----~v~~~~----g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~ 366 (395)
+... .+.+.+ |+++++|.|++|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+
T Consensus 252 i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~ 329 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVA-VTDRGFIEVD-KQMRTNVPHIYAIGDIVGQP 329 (482)
T ss_dssp EEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCC-CCTTSCCCCC-TTSBCSSTTEEECGGGTCSS
T ss_pred EEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCce-eCCCCCEeeC-CCcccCCCCEEEEEcccCCC
Confidence 6532 366676 7789999999999999998444 6788898 7888999999 68899999999999999865
Q ss_pred c---cchhhHHHHHHHHHhh
Q 039923 367 L---GISMDAHKVADDIASQ 383 (395)
Q Consensus 367 ~---~a~~~g~~~a~~i~~~ 383 (395)
. .|..||+.+|++|.+.
T Consensus 330 ~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 330 MLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp CCHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHHcCC
Confidence 4 8999999999999873
No 53
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=7e-34 Score=270.54 Aligned_cols=297 Identities=17% Similarity=0.236 Sum_probs=200.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeecCC----ccccCCCCCCCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHLPK----QFCQLPYVPFPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|.+|++.|++|+|||+. .+||+|.... .+...+.... .....+.+.+... ....+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCHH
Confidence 479999999999999999999999999999998 7888765310 1100000000 0000000000000 0011222
Q ss_pred HHH-----------HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCC
Q 039923 85 QFI-----------TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISE 153 (395)
Q Consensus 85 ~~~-----------~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~ 153 (395)
.+. ..+...+++.+++++.++ +..++ . .. |++++.++.||+||+||| +.|..|++||.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~--~--~~--v~~~g~~~~~d~lviAtG--s~p~~p~i~G~~~ 152 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVD--A--HT--IEVEGQRLSADHIVIATG--GRPIVPRLPGAEL 152 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--T--TE--EEETTEEEEEEEEEECCC--EEECCCSCTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEcc--C--CE--EEECCEEEEcCEEEECCC--CCCCCCCCCCccc
Confidence 222 223344466788877664 33443 2 33 555567899999999999 7888888888632
Q ss_pred CcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhH
Q 039923 154 FRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDV 233 (395)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (395)
..+...+... ...+++++|||+|.+|+|+|..|.+.|.+|+++++++ .+++..+. .+..
T Consensus 153 ----~~~~~~~~~~-~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~-----~~~~---------- 211 (463)
T 2r9z_A 153 ----GITSDGFFAL-QQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDP-----LLSA---------- 211 (463)
T ss_dssp ----SBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHH----------
T ss_pred ----eecHHHHhhh-hccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCH-----HHHH----------
Confidence 1222221111 2257899999999999999999999999999999987 55443221 1111
Q ss_pred HHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEeCCc
Q 039923 234 VDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFVNRT 307 (395)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~ 307 (395)
.+.+.+++.+++++.+ |.+++.. .+.+.+|+
T Consensus 212 -------------------------------------------~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~ 248 (463)
T 2r9z_A 212 -------------------------------------------TLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGT 248 (463)
T ss_dssp -------------------------------------------HHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCC
T ss_pred -------------------------------------------HHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCc
Confidence 1123333445666654 6666532 47778898
Q ss_pred -EecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHHHHh
Q 039923 308 -VKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADDIAS 382 (395)
Q Consensus 308 -~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~i~~ 382 (395)
++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+.+|.+|.+
T Consensus 249 ~~i~~D~vv~a~G~~p~~~~l~~~~~g~~-~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 249 RLEGFDSVIWAVGRAPNTRDLGLEAAGIE-VQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp EEEEESEEEECSCEEESCTTSCHHHHTCC-CCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHS
T ss_pred EEEEcCEEEECCCCCcCCCCCCchhcCCc-cCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcC
Confidence 89999999999999998544 5677888 7889999999 678899999999999987554 889999999999986
Q ss_pred h
Q 039923 383 Q 383 (395)
Q Consensus 383 ~ 383 (395)
.
T Consensus 327 ~ 327 (463)
T 2r9z_A 327 G 327 (463)
T ss_dssp C
T ss_pred C
Confidence 4
No 54
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=274.37 Aligned_cols=299 Identities=16% Similarity=0.217 Sum_probs=200.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecCC---ccccCCCCCCCCC----C-CC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLPK---QFCQLPYVPFPRE----Y-PA 79 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~~---~~~~~~~~~~~~~----~-~~ 79 (395)
.+||+|||||++|+++|.+|++.|++|+|||++ .+||+|.... .+...+ ..+. .......+.+... . ..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 479999999999999999999999999999997 6888765310 110000 0000 0000011100000 0 00
Q ss_pred CCCHHHHH-----------HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-E--EEEeCEEEEeeCCCCCCCC
Q 039923 80 YPSGQQFI-----------TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-Y--EFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 80 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~--~~~~d~lVlAtG~~~~~~~ 145 (395)
..+-..+. ..+...+++.+++++.++ +..+ +. ..+.+.+.+ + ++.||+||+||| +.|..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~--~~~~v~~~~g~~~~~~~d~lviAtG--s~p~~ 162 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KD--GNVEVQKRDNTTEVYSANHILVATG--GKAIF 162 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TT--SCEEEEESSSCCEEEEEEEEEECCC--EEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC--CEEEEEeCCCcEEEEEeCEEEEcCC--CCCCC
Confidence 11222222 233444556677766553 4333 22 456676654 3 899999999999 78888
Q ss_pred C-CCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHH
Q 039923 146 P-KIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVW 224 (395)
Q Consensus 146 p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 224 (395)
| ++||.+. ..++..+.. ....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+. .+...
T Consensus 163 p~~i~g~~~----~~~~~~~~~-l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~~ 231 (479)
T 2hqm_A 163 PENIPGFEL----GTDSDGFFR-LEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE-TVLRKFDE-----CIQNT 231 (479)
T ss_dssp CTTSTTGGG----SBCHHHHHH-CSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHHHH
T ss_pred CCCCCCccc----ccchHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC-ccccccCH-----HHHHH
Confidence 8 8888642 122211111 12357999999999999999999999999999999988 56554322 11111
Q ss_pred HHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC---
Q 039923 225 LLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--- 299 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--- 299 (395)
+.+.+++.+|++..+ |.++...
T Consensus 232 -----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 258 (479)
T 2hqm_A 232 -----------------------------------------------------ITDHYVKEGINVHKLSKIVKVEKNVET 258 (479)
T ss_dssp -----------------------------------------------------HHHHHHHHTCEEECSCCEEEEEECC-C
T ss_pred -----------------------------------------------------HHHHHHhCCeEEEeCCEEEEEEEcCCC
Confidence 122223334555544 5666431
Q ss_pred ---eEEEeCC-cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchh
Q 039923 300 ---GAEFVNR-TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISM 371 (395)
Q Consensus 300 ---~v~~~~g-~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~ 371 (395)
.+.+.+| +++++|.||+|+|++|+. .+ ++..+++ ++++|++.+| ++++|+.|+|||+|||+..+. .|..
T Consensus 259 ~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~ 335 (479)
T 2hqm_A 259 DKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIK-LNSHDQIIAD-EYQNTNVPNIYSLGDVVGKVELTPVAIA 335 (479)
T ss_dssp CCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCC-BCTTSCBCCC-TTCBCSSTTEEECGGGTTSSCCHHHHHH
T ss_pred cEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCce-ECCCCCEeEC-CCCccCCCCEEEEEecCCCcccHHHHHH
Confidence 4677788 789999999999999998 66 7888998 8889999999 678999999999999987654 8999
Q ss_pred hHHHHHHHHHhh
Q 039923 372 DAHKVADDIASQ 383 (395)
Q Consensus 372 ~g~~~a~~i~~~ 383 (395)
||+.+|++|.+.
T Consensus 336 ~g~~aa~~i~~~ 347 (479)
T 2hqm_A 336 AGRKLSNRLFGP 347 (479)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHhcCC
Confidence 999999999864
No 55
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=5.7e-34 Score=272.87 Aligned_cols=301 Identities=16% Similarity=0.147 Sum_probs=202.9
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCcccccccC-CcCceeeecCCcc----ccCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-RGVPSLIIE--------KESCLASLWKLK-IYDHLQLHLPKQF----CQLPYVPFPR 75 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-~g~~v~lie--------~~~~~~g~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~ 75 (395)
++||+|||||++|+++|.+|++ .|++|+||| +...+||++... .+|...+.....+ .....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999 356788865431 1111000000000 0000000000
Q ss_pred CCC-CCCCHHHHH-----------HHHHHHHHHc-CCccccCceEEEEEEcCCCCcEEEEE----cc---EEEEeCEEEE
Q 039923 76 EYP-AYPSGQQFI-----------TYMEAYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKT----HE---YEFMCRWLIV 135 (395)
Q Consensus 76 ~~~-~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~----~~---~~~~~d~lVl 135 (395)
... ...+...+. ..+...+++. +++++.++ +..++ . ..+.+.. ++ ..+.||+||+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~v~v~~~~~~~g~~~~~~~~d~lvi 157 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD--N--HTVLVRESADPNSAVLETLDTEYILL 157 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE--T--TEEEEESSSSTTSCEEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee--C--CEEEEEeeccCCCCceEEEEcCEEEE
Confidence 000 001112222 2334445566 88877664 55553 2 4444543 44 6899999999
Q ss_pred eeCCCCCCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhC---CCeEEEEEecCceeeecc
Q 039923 136 ATGENEVPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKN---GAQVSLVVRDKVHILPKK 212 (395)
Q Consensus 136 AtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~V~~~~r~~~~~~p~~ 212 (395)
||| +.|..|++||.+. ..+...+... ...+++++|||+|.+|+|+|..|.+. |.+|+++++.+ +++|..
T Consensus 158 AtG--s~p~~p~i~g~~~----~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~~l~~~ 229 (490)
T 1fec_A 158 ATG--SWPQHLGIEGDDL----CITSNEAFYL-DEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD-MILRGF 229 (490)
T ss_dssp CCC--EEECCCCSBTGGG----CBCHHHHTTC-SSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS-SSSTTS
T ss_pred eCC--CCCCCCCCCCccc----eecHHHHhhh-hhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC-Cccccc
Confidence 999 7888888888632 1222222221 23578999999999999999999999 99999999998 565542
Q ss_pred ccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC
Q 039923 213 ILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG 292 (395)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 292 (395)
+. .+... +.+.+++.+|+++.+
T Consensus 230 d~-----~~~~~-----------------------------------------------------l~~~l~~~GV~i~~~ 251 (490)
T 1fec_A 230 DS-----ELRKQ-----------------------------------------------------LTEQLRANGINVRTH 251 (490)
T ss_dssp CH-----HHHHH-----------------------------------------------------HHHHHHHTTEEEEET
T ss_pred CH-----HHHHH-----------------------------------------------------HHHHHHhCCCEEEeC
Confidence 22 11111 223333445666654
Q ss_pred --ccEEecC-----eEEEeCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc
Q 039923 293 --IQKFTAK-----GAEFVNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ 364 (395)
Q Consensus 293 --v~~~~~~-----~v~~~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~ 364 (395)
|.++... .+.+.+|+++++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+.
T Consensus 252 ~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~-~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~ 329 (490)
T 1fec_A 252 ENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVE-VAKNGAIKVD-AYSKTNVDNIYAIGDVTD 329 (490)
T ss_dssp CCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCC-BCTTSCBCCC-TTCBCSSTTEEECGGGGC
T ss_pred CEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCcc-CCCCCCEEEC-CCCccCCCCEEEEeccCC
Confidence 6666532 4677788899999999999999998545 6788898 7889999999 678899999999999997
Q ss_pred ccc---cchhhHHHHHHHHHhh
Q 039923 365 GLL---GISMDAHKVADDIASQ 383 (395)
Q Consensus 365 ~~~---~a~~~g~~~a~~i~~~ 383 (395)
.+. .|..||+.+|++|.+.
T Consensus 330 ~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 330 RVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSS
T ss_pred CccCHHHHHHHHHHHHHHhcCC
Confidence 644 8999999999999863
No 56
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=5.9e-34 Score=265.10 Aligned_cols=282 Identities=18% Similarity=0.233 Sum_probs=200.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
++||+|||||++|+++|..|++.| .+|+++|++. |..+....++ . .+.......++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~-------~------------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLS-------T------------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGG-------G------------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCccccc-------H------------HHhCCCCHHHhh
Confidence 489999999999999999999998 5799999875 2222111000 0 001112233443
Q ss_pred H-HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 88 T-YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 88 ~-~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
. ++..++++.+++++.+++|+.++... .. |++++.++.||+||+||| +.|..|++||.+. ..+++...+.+
T Consensus 63 ~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~--v~~~~~~~~~d~lviAtG--~~p~~p~i~g~~~--~~v~~~~~~~~ 134 (384)
T 2v3a_A 63 MAEPGAMAEQLNARILTHTRVTGIDPGH--QR--IWIGEEEVRYRDLVLAWG--AEPIRVPVEGDAQ--DALYPINDLED 134 (384)
T ss_dssp EECHHHHHHHTTCEEECSCCCCEEEGGG--TE--EEETTEEEECSEEEECCC--EEECCCCCBSTTT--TCEEECSSHHH
T ss_pred ccCHHHHHHhCCcEEEeCCEEEEEECCC--CE--EEECCcEEECCEEEEeCC--CCcCCCCCCCcCc--CCEEEECCHHH
Confidence 2 45666778899998888898888754 33 666677899999999999 7888888888653 22344433322
Q ss_pred C-----cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHh
Q 039923 167 G-----VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFC 241 (395)
Q Consensus 167 ~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (395)
. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++.... ..+..
T Consensus 135 ~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~~----~~~~~------------------ 191 (384)
T 2v3a_A 135 YARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLLH----PAAAK------------------ 191 (384)
T ss_dssp HHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSC----HHHHH------------------
T ss_pred HHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhcccC----HHHHH------------------
Confidence 1 12248999999999999999999999999999999988 55553211 01111
Q ss_pred hhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEeCCcEecCcEEE
Q 039923 242 SRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFVNRTVKEFDSII 315 (395)
Q Consensus 242 ~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~~i~~D~vi 315 (395)
.+.+.+++.+++++.+ |.++... .+.+.+|+++++|.||
T Consensus 192 -----------------------------------~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv 236 (384)
T 2v3a_A 192 -----------------------------------AVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVV 236 (384)
T ss_dssp -----------------------------------HHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEE
T ss_pred -----------------------------------HHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEE
Confidence 1223333445555544 6666432 4677889899999999
Q ss_pred EcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc--cc---c--cchhhHHHHHHHHHhh
Q 039923 316 LATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ--GL---L--GISMDAHKVADDIASQ 383 (395)
Q Consensus 316 ~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~--~~---~--~a~~~g~~~a~~i~~~ 383 (395)
+|+|.+|+. .+++..++. .+ +| +.+| ++++|+.|+|||+|||+. +. . .|..||+.+|++|.+.
T Consensus 237 ~a~G~~p~~-~l~~~~g~~-~~-~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 237 SAVGLRPRT-ELAFAAGLA-VN-RG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp ECSCEEECC-HHHHHTTCC-BS-SS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred ECcCCCcCH-HHHHHCCCC-CC-CC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCC
Confidence 999999997 477888888 55 67 8888 678899999999999984 21 1 5789999999999864
No 57
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.7e-34 Score=266.05 Aligned_cols=282 Identities=17% Similarity=0.201 Sum_probs=198.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV--PSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
++|+|||||++|+++|.+|++.|+ +|+|||+++..+ |.... .+..+...... + .++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~--l~~~~l~~~~~--~---------~~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPP--LSKAYLKSGGD--P---------NSLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGG--GGTGGGGSCCC--T---------TSSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCcc--CCHHHHCCCCC--H---------HHccC
Confidence 689999999999999999999998 899999998544 11110 01111110000 0 00111
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC-
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN- 166 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~- 166 (395)
.......+.+++++. ++|+.++... .. +++.+ .++.||+||+||| +.|+.|++||.+.. .+.......+
T Consensus 62 ~~~~~~~~~~i~~~~-~~v~~id~~~--~~--v~~~~g~~~~~d~lvlAtG--~~p~~~~i~g~~~~--~v~~~~~~~d~ 132 (404)
T 3fg2_P 62 RPEKFFQDQAIELIS-DRMVSIDREG--RK--LLLASGTAIEYGHLVLATG--ARNRMLDVPNASLP--DVLYLRTLDES 132 (404)
T ss_dssp SCHHHHHHTTEEEEC-CCEEEEETTT--TE--EEESSSCEEECSEEEECCC--EEECCCCSTTTTST--TEECCSSHHHH
T ss_pred CCHHHHHhCCCEEEE-EEEEEEECCC--CE--EEECCCCEEECCEEEEeeC--CCccCCCCCCCCCC--cEEEECCHHHH
Confidence 123344556888887 8999998765 43 66666 7899999999999 68888888886531 1222111111
Q ss_pred ----CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhh
Q 039923 167 ----GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCS 242 (395)
Q Consensus 167 ----~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (395)
.....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++++...
T Consensus 133 ~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~~~~---------------------------- 183 (404)
T 3fg2_P 133 EVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMARVVT---------------------------- 183 (404)
T ss_dssp HHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSC----------------------------
T ss_pred HHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhhccC----------------------------
Confidence 112258999999999999999999999999999999988 44443211
Q ss_pred hhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-----eEEEeCCcEecCcEEE
Q 039923 243 RLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-----GAEFVNRTVKEFDSII 315 (395)
Q Consensus 243 ~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~~g~~i~~D~vi 315 (395)
+.....+.+.+++.+++++.+ |+++... ++.+.+|+++++|.||
T Consensus 184 -----------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv 234 (404)
T 3fg2_P 184 -----------------------------PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVV 234 (404)
T ss_dssp -----------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEE
T ss_pred -----------------------------HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEE
Confidence 011111233344456666654 6666543 4788899999999999
Q ss_pred EcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc-------------cchhhHHHHHHHHHh
Q 039923 316 LATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL-------------GISMDAHKVADDIAS 382 (395)
Q Consensus 316 ~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~-------------~a~~~g~~~a~~i~~ 382 (395)
+|+|++|+. .+++..++. .+ +| +.+| .+++|+.|+|||+|||+..+. .|..||+.+|++|.+
T Consensus 235 ~a~G~~p~~-~l~~~~gl~-~~-~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 235 VGVGVIPNV-EIAAAAGLP-TA-AG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp ECCCEEECC-HHHHHTTCC-BS-SS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred ECcCCccCH-HHHHhCCCC-CC-CC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 999999997 677888887 44 56 7777 688899999999999986542 688999999999987
Q ss_pred hh
Q 039923 383 QW 384 (395)
Q Consensus 383 ~~ 384 (395)
.-
T Consensus 310 ~~ 311 (404)
T 3fg2_P 310 DA 311 (404)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 58
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=8.2e-34 Score=270.63 Aligned_cols=297 Identities=16% Similarity=0.171 Sum_probs=201.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeecC----Cccc-cCCCCCCCCCCCCCCCH-
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHLP----KQFC-QLPYVPFPREYPAYPSG- 83 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~- 83 (395)
+||+|||||++|+++|..|++.|++|+|||+. .+||++.... .+...+... ..+. ....+... . ....+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~-~~~~~~~ 80 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G-EVTFDYG 80 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E-CCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C-CCccCHH
Confidence 79999999999999999999999999999998 6777653210 111000000 0000 00000000 0 000111
Q ss_pred ----------HHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCCCCC
Q 039923 84 ----------QQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPKIPG 150 (395)
Q Consensus 84 ----------~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~~~g 150 (395)
..+...+...+++.+++++.++.+. .+. ..+++.+.+ .++.||+||+||| +.+..|+++|
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~--~~v~V~~~~G~~~~~~~d~lViAtG--~~~~~~~~~g 153 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADA--NTLLVDLNDGGTESVTFDNAIIATG--SSTRLVPGTS 153 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSS--SEEEEEETTSCCEEEEEEEEEECCC--EEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC--CeEEEEeCCCceEEEEcCEEEECCC--CCCCCCCCCC
Confidence 1233345566677788887776442 222 566776643 6899999999999 6788888887
Q ss_pred CCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 151 ISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
.+. .+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|++++|.+ +++|..+. .+...+
T Consensus 154 ~~~---~~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l----- 218 (464)
T 2a8x_A 154 LSA---NVVTYEEQILS-RELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDA-----DVSKEI----- 218 (464)
T ss_dssp CBT---TEECHHHHHTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHHH-----
T ss_pred CCc---eEEecHHHhhc-cccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----HHHHHH-----
Confidence 653 23333322222 2257999999999999999999999999999999998 66664332 122111
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEe
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFV 304 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~ 304 (395)
.+.+++.+|+++.+ |.++... .+.+.
T Consensus 219 ------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~ 250 (464)
T 2a8x_A 219 ------------------------------------------------EKQFKKLGVTILTATKVESIADGGSQVTVTVT 250 (464)
T ss_dssp ------------------------------------------------HHHHHHHTCEEECSCEEEEEEECSSCEEEEEE
T ss_pred ------------------------------------------------HHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEE
Confidence 22222334555544 5666532 24444
Q ss_pred -CC--cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHH
Q 039923 305 -NR--TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVA 377 (395)
Q Consensus 305 -~g--~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a 377 (395)
+| +++++|.|++|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+.+|
T Consensus 251 ~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa 328 (464)
T 2a8x_A 251 KDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVA-LTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAA 328 (464)
T ss_dssp SSSCEEEEEESEEEECSCEEECCSSSCHHHHTCC-BCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHH
T ss_pred cCCceEEEEcCEEEECCCCCccCCCCCchhcCCc-cCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHHHHHHHHHHH
Confidence 66 679999999999999998443 5677888 7888999999 678899999999999997654 8999999999
Q ss_pred HHHHh
Q 039923 378 DDIAS 382 (395)
Q Consensus 378 ~~i~~ 382 (395)
++|.+
T Consensus 329 ~~i~g 333 (464)
T 2a8x_A 329 ETIAG 333 (464)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 99987
No 59
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.1e-34 Score=272.52 Aligned_cols=297 Identities=15% Similarity=0.141 Sum_probs=202.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-e---cCCccccCCCCCCCCCCCCCCCH-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-H---LPKQFCQLPYVPFPREYPAYPSG- 83 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~- 83 (395)
.+||+|||||++|+++|+.|++.|++|+|||+ ..+||+|.... .+...+ . ........+.+.+....+ ..+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 48999999999999999999999999999999 67888664310 000000 0 000000000000000000 0111
Q ss_pred ----------HHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--ccEEEEeCEEEEeeCCCCCCC-CCCCCC
Q 039923 84 ----------QQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HEYEFMCRWLIVATGENEVPV-LPKIPG 150 (395)
Q Consensus 84 ----------~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~~~~~~d~lVlAtG~~~~~~-~p~~~g 150 (395)
..+..++...+++.++++..+ ++..++ . . .+.+ ++..+.||+||+||| +.|. .|++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~--~--~v~~~~~~~~~~~d~lviAtG--~~p~~~p~i~G 153 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--P--N--TVKLLASGKTVTAERIVIAVG--GHPSPHDALPG 153 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--S--S--EEEETTTTEEEEEEEEEECCC--EEECCCTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--C--C--EEEEecCCeEEEeCEEEEecC--CCcccCCCCCC
Confidence 133344555566678887655 333331 1 2 3555 448899999999999 7888 888888
Q ss_pred CCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 151 ISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
.+.. .+...+.. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++|..+. .+..
T Consensus 154 ~~~~----~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~-----~~~~------- 215 (463)
T 4dna_A 154 HELC----ITSNEAFD-LPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ-----DMRR------- 215 (463)
T ss_dssp GGGC----BCHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHH-------
T ss_pred cccc----ccHHHHhh-hhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----HHHH-------
Confidence 6531 22222222 22358999999999999999999999999999999988 55543322 1111
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-----eEE-
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-----GAE- 302 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~- 302 (395)
.+.+.+++.+++++.+ |.++... .+.
T Consensus 216 ----------------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~ 249 (463)
T 4dna_A 216 ----------------------------------------------GLHAAMEEKGIRILCEDIIQSVSADADGRRVATT 249 (463)
T ss_dssp ----------------------------------------------HHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEE
T ss_pred ----------------------------------------------HHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEE
Confidence 1233344445666654 6666542 366
Q ss_pred EeCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHH
Q 039923 303 FVNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVAD 378 (395)
Q Consensus 303 ~~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~ 378 (395)
+.+|+ +++|.||+|+|++|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+.+|+
T Consensus 250 ~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~ 326 (463)
T 4dna_A 250 MKHGE-IVADQVMLALGRMPNTNGLGLEAAGVR-TNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIE 326 (463)
T ss_dssp SSSCE-EEESEEEECSCEEESCTTSSTGGGTCC-BCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHH
T ss_pred cCCCe-EEeCEEEEeeCcccCCCCCCccccCce-ECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHH
Confidence 67887 9999999999999998544 6778998 8899999999 778899999999999998655 89999999999
Q ss_pred HHHhhh
Q 039923 379 DIASQW 384 (395)
Q Consensus 379 ~i~~~~ 384 (395)
+|.+..
T Consensus 327 ~i~g~~ 332 (463)
T 4dna_A 327 TEYKNN 332 (463)
T ss_dssp HHHSSC
T ss_pred HHcCCC
Confidence 998753
No 60
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=4.6e-33 Score=266.43 Aligned_cols=304 Identities=18% Similarity=0.208 Sum_probs=201.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC------cccccccC-CcCceee-ecCCcccc----CCCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC------LASLWKLK-IYDHLQL-HLPKQFCQ----LPYVPFPRE 76 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~------~~g~~~~~-~~~~~~~-~~~~~~~~----~~~~~~~~~ 76 (395)
..+||+|||||++|+++|.+|++.|++|+|||+... +||+|... ..+...+ .....+.. +..+.+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999874 45544221 0010000 00000000 000000000
Q ss_pred CCCCCCHHH-----------HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCC
Q 039923 77 YPAYPSGQQ-----------FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEV 142 (395)
Q Consensus 77 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~ 142 (395)
........ +...+....++.+++++.+..+ . .+. ..+.+...+ ..+.||+||+||| +.
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~--~~~--~~~~v~~~~g~~~~~~~d~lvlAtG--~~ 153 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGK-L--LAG--KKVEVTAADGSSQVLDTENVILASG--SK 153 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEE-E--CST--TCEEEECTTSCEEEECCSCEEECCC--EE
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-E--ecC--CEEEEEcCCCceEEEEcCEEEEcCC--CC
Confidence 00111122 2223344555668877655422 2 222 566676544 5899999999999 67
Q ss_pred CCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHH
Q 039923 143 PVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAIS 222 (395)
Q Consensus 143 ~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~ 222 (395)
|..|+.++.+. ..+.++..... ....+++++|||+|.+|+|+|..+.+.|.+|++++|.+ +++|..+. .+.
T Consensus 154 p~~~~~~~~~~--~~v~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~ 224 (476)
T 3lad_A 154 PVEIPPAPVDQ--DVIVDSTGALD-FQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFLPAVDE-----QVA 224 (476)
T ss_dssp ECCCTTSCCCS--SSEEEHHHHTS-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH-----HHH
T ss_pred CCCCCCCCCCc--ccEEechhhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCcccCH-----HHH
Confidence 77665544332 23444433332 23468999999999999999999999999999999998 66554322 111
Q ss_pred HHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-
Q 039923 223 VWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK- 299 (395)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~- 299 (395)
. .+.+.+++.+|+++.+ |.++...
T Consensus 225 ~-----------------------------------------------------~l~~~l~~~Gv~v~~~~~v~~i~~~~ 251 (476)
T 3lad_A 225 K-----------------------------------------------------EAQKILTKQGLKILLGARVTGTEVKN 251 (476)
T ss_dssp H-----------------------------------------------------HHHHHHHHTTEEEEETCEEEEEEECS
T ss_pred H-----------------------------------------------------HHHHHHHhCCCEEEECCEEEEEEEcC
Confidence 1 1233344456666654 6666532
Q ss_pred ---eEEEeCC---cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cc
Q 039923 300 ---GAEFVNR---TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GI 369 (395)
Q Consensus 300 ---~v~~~~g---~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a 369 (395)
.+.+.++ +++++|.||+|+|++|+...+ ++..++. ++++|++.+| .+++|+.|+|||+|||+..+. .|
T Consensus 252 ~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~-~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A 329 (476)
T 3lad_A 252 KQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVT-LDERGFIYVD-DYCATSVPGVYAIGDVVRGAMLAHKA 329 (476)
T ss_dssp SCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCC-BCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCCHHHH
T ss_pred CEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCcc-ccCCCCEeeC-CCcccCCCCEEEEEccCCCcccHHHH
Confidence 2556654 679999999999999998654 6777888 8889999999 778899999999999997655 89
Q ss_pred hhhHHHHHHHHHhhh
Q 039923 370 SMDAHKVADDIASQW 384 (395)
Q Consensus 370 ~~~g~~~a~~i~~~~ 384 (395)
..||+.+|++|.+..
T Consensus 330 ~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 330 SEEGVVVAERIAGHK 344 (476)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCC
Confidence 999999999998753
No 61
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.7e-33 Score=268.16 Aligned_cols=297 Identities=18% Similarity=0.183 Sum_probs=199.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeecCCccc----cCCCCCCCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHLPKQFC----QLPYVPFPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|++.|++|+|||++. +||+|.... .+...+......+ ....+..+ . ....+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-~-~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-A-KPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-C-CCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-C-CCCcCHH
Confidence 4899999999999999999999999999999987 888764321 1110000000000 00000000 0 0011112
Q ss_pred HH-------HHH----HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCC-CCCCC
Q 039923 85 QF-------ITY----MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPK-IPGIS 152 (395)
Q Consensus 85 ~~-------~~~----~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~-~~g~~ 152 (395)
.+ .++ +...+++.+++++.++.+. ++ . .. +++.++++.||+||+||| ++|..|+ +++ +
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~--~~--v~v~g~~~~~d~lViATG--s~p~~p~gi~~-~ 152 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG--P--KE--VEVGGERYGAKSLILATG--SEPLELKGFPF-G 152 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE--T--TE--EEETTEEEEEEEEEECCC--EEECCBTTBCC-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc--C--CE--EEEccEEEEeCEEEEcCC--CCCCCCCCCCC-C
Confidence 22 222 3455667788887776443 32 2 33 444467899999999999 6777775 665 2
Q ss_pred CCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChh
Q 039923 153 EFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVD 232 (395)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (395)
..++++..........+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+. .+...
T Consensus 153 ---~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~-------- 215 (464)
T 2eq6_A 153 ---EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDP-----ETAAL-------- 215 (464)
T ss_dssp ---SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHH--------
T ss_pred ---CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----HHHHH--------
Confidence 12344443333333357999999999999999999999999999999988 56554322 11111
Q ss_pred HHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEe-C
Q 039923 233 VVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFV-N 305 (395)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~-~ 305 (395)
+.+.+++.+|+++.+ |.+++.. .+.+. +
T Consensus 216 ---------------------------------------------l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 250 (464)
T 2eq6_A 216 ---------------------------------------------LRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPA 250 (464)
T ss_dssp ---------------------------------------------HHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEET
T ss_pred ---------------------------------------------HHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeec
Confidence 122333445666654 5666532 25555 6
Q ss_pred --Cc--EecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHH
Q 039923 306 --RT--VKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVA 377 (395)
Q Consensus 306 --g~--~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a 377 (395)
|+ ++++|.|++|+|.+|+...+ ++..++. ++++|++.+| ++++|+.|+|||+|||+..+. .|..||+.+|
T Consensus 251 ~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa 328 (464)
T 2eq6_A 251 EGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVK-VDERGFIRVN-ARMETSVPGVYAIGDAARPPLLAHKAMREGLIAA 328 (464)
T ss_dssp TCCSCEEEEESEEEECSCEEESCTTSSHHHHTCC-BCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHH
T ss_pred CCCceeEEEcCEEEECCCcccCCCCCChhhcCce-ecCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHH
Confidence 76 89999999999999998543 5677888 7789999999 678899999999999997655 8999999999
Q ss_pred HHHHhh
Q 039923 378 DDIASQ 383 (395)
Q Consensus 378 ~~i~~~ 383 (395)
++|.+.
T Consensus 329 ~~i~g~ 334 (464)
T 2eq6_A 329 ENAAGK 334 (464)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999863
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.1e-33 Score=268.99 Aligned_cols=303 Identities=15% Similarity=0.092 Sum_probs=201.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeecCC----ccc-cCCCCCCCCCCCCCCCH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHLPK----QFC-QLPYVPFPREYPAYPSG 83 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~ 83 (395)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|.... .+...+.... .+. .......+.......+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999888988764321 0000000000 000 00000000000001122
Q ss_pred HHH-----------HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EE------EEeCEEEEeeCCCCCC
Q 039923 84 QQF-----------ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YE------FMCRWLIVATGENEVP 143 (395)
Q Consensus 84 ~~~-----------~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~------~~~d~lVlAtG~~~~~ 143 (395)
..+ ...+...+++.+++++.++.+.. + ...++|++.+ .+ +.||+||+||| +.|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~--~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtG--s~p 157 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---D--ETKIRVTPVDGLEGTVKEDHILDVKNIIVATG--SEV 157 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---S--SSEEEEECCTTCTTCCSSCEEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---c--CCeEEEEecCCCcccccccceEEeCEEEECcC--CCC
Confidence 222 22344556677888887766531 2 2566676543 35 99999999999 444
Q ss_pred CCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHH
Q 039923 144 VLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISV 223 (395)
Q Consensus 144 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~ 223 (395)
. .+||.+.....+.++....... ..+++++|||+|.+|+|+|..|++.|.+||+++|++ +++|..+. .+..
T Consensus 158 ~--~~~g~~~~~~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~ 228 (478)
T 1v59_A 158 T--PFPGIEIDEEKIVSSTGALSLK-EIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASMDG-----EVAK 228 (478)
T ss_dssp C--CCTTCCCCSSSEECHHHHTTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSSCH-----HHHH
T ss_pred C--CCCCCCCCCceEEcHHHHHhhh-ccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccccccCH-----HHHH
Confidence 2 3455432111234433332222 257999999999999999999999999999999998 66663322 1111
Q ss_pred HHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--C
Q 039923 224 WLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--K 299 (395)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~ 299 (395)
. +.+.+++.+|+++.+ |.++.. .
T Consensus 229 ~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~ 255 (478)
T 1v59_A 229 A-----------------------------------------------------TQKFLKKQGLDFKLSTKVISAKRNDD 255 (478)
T ss_dssp H-----------------------------------------------------HHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred H-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEecC
Confidence 1 223333445666654 666654 2
Q ss_pred ----eEEEe-----CCcEecCcEEEEcCCCCCCCCc-cccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc--
Q 039923 300 ----GAEFV-----NRTVKEFDSIILATGYRSNVSS-WLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL-- 367 (395)
Q Consensus 300 ----~v~~~-----~g~~i~~D~vi~atG~~~~~~~-~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~-- 367 (395)
.+.+. +++++++|.||+|+|++|+... +++..++. ++++|++.+| ++++|+.|+|||+|||+..+.
T Consensus 256 ~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~ 333 (478)
T 1v59_A 256 KNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLE-VDKRGRLVID-DQFNSKFPHIKVVGDVTFGPMLA 333 (478)
T ss_dssp TTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCC-BCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCCH
T ss_pred CCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCce-eCCCCCEeEC-cCCccCCCCEEEeeccCCCcccH
Confidence 24555 4568999999999999999843 57788898 7889999999 678899999999999998655
Q ss_pred -cchhhHHHHHHHHHhh
Q 039923 368 -GISMDAHKVADDIASQ 383 (395)
Q Consensus 368 -~a~~~g~~~a~~i~~~ 383 (395)
.|..||+.+|++|.+.
T Consensus 334 ~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 334 HKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 8999999999999874
No 63
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=3.8e-34 Score=272.05 Aligned_cols=287 Identities=17% Similarity=0.203 Sum_probs=200.1
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+||+|||||++|+++|..|++. |.+|+|||+++.++... + ++........... ..+++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~--~---~~~~~~~g~~~~~-------------~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLS--C---GIALYLGKEIKNN-------------DPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCG--G---GHHHHHTTCBGGG-------------CGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccc--c---cchhhhcCCcccC-------------CHHHhhh
Confidence 4899999999999999999998 99999999987554210 0 0000000000000 0011111
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----cEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----EYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTY 164 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~ 164 (395)
.+...+++.+++++.+++|..++..+ +.+.+... +.++.||+||+||| ++|..|++||.+. ..+++...+
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~~~g~~~~~~~d~lviAtG--s~p~~p~i~g~~~--~~v~~~~~~ 136 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET--KTIKVKDLITNEEKTEAYDKLIMTTG--SKPTVPPIPGIDS--SRVYLCKNY 136 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG--TEEEEEETTTCCEEEEECSEEEECCC--EEECCCCCTTTTS--TTEEECSSH
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC--CEEEEEecCCCceEEEECCEEEEccC--CCcCCCCCCCCCC--CCEEEeCcH
Confidence 12344556789998899999998776 66656541 36899999999999 7888899998753 223443322
Q ss_pred CCC-----cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHH
Q 039923 165 KNG-----VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLL 239 (395)
Q Consensus 165 ~~~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (395)
.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|+... ..+...
T Consensus 137 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----~~~~~~--------------- 196 (452)
T 2cdu_A 137 NDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYFD----KEFTDI--------------- 196 (452)
T ss_dssp HHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTSC----HHHHHH---------------
T ss_pred HHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhhh----hhHHHH---------------
Confidence 211 12358999999999999999999999999999999988 55552111 011111
Q ss_pred HhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--CeE--EEeCCcEecCcE
Q 039923 240 FCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--KGA--EFVNRTVKEFDS 313 (395)
Q Consensus 240 ~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v--~~~~g~~i~~D~ 313 (395)
+.+.+++.+++++.+ |.++.. .++ ...+|+++++|.
T Consensus 197 --------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~ 238 (452)
T 2cdu_A 197 --------------------------------------LAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDI 238 (452)
T ss_dssp --------------------------------------HHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESE
T ss_pred --------------------------------------HHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCE
Confidence 222333345555544 666654 222 234788999999
Q ss_pred EEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-----------c--cchhhHHHHHHHH
Q 039923 314 IILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-----------L--GISMDAHKVADDI 380 (395)
Q Consensus 314 vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-----------~--~a~~~g~~~a~~i 380 (395)
||+|+|++|+. .+++.. +. ++++|++.+| ++++|+.|+|||+|||+..+ . .|..||+.+|++|
T Consensus 239 vv~a~G~~p~~-~ll~~~-l~-~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i 314 (452)
T 2cdu_A 239 AILCIGFRPNT-ELLKGK-VA-MLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNL 314 (452)
T ss_dssp EEECCCEEECC-GGGTTT-SC-BCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTS
T ss_pred EEECcCCCCCH-HHHHHh-hh-cCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHh
Confidence 99999999998 566666 77 7889999999 78899999999999998742 1 8999999999999
Q ss_pred Hhh
Q 039923 381 ASQ 383 (395)
Q Consensus 381 ~~~ 383 (395)
.+.
T Consensus 315 ~g~ 317 (452)
T 2cdu_A 315 TED 317 (452)
T ss_dssp SSC
T ss_pred CCC
Confidence 864
No 64
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1e-33 Score=271.20 Aligned_cols=298 Identities=14% Similarity=0.121 Sum_probs=200.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceeeec----CCccccCCCCCCCCCCCCCCCH-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQLHL----PKQFCQLPYVPFPREYPAYPSG- 83 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~- 83 (395)
.+||+|||||++|+++|++|++.|++|+|||+ ..+||.|.... ++...+.. ...+...+.+.+..... ....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 37999999999999999999999999999999 67888654311 11000000 00000000000000000 0111
Q ss_pred ----------HHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--ccEEEEeCEEEEeeCCCCCCC-CCCCCC
Q 039923 84 ----------QQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HEYEFMCRWLIVATGENEVPV-LPKIPG 150 (395)
Q Consensus 84 ----------~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~~~~~~d~lVlAtG~~~~~~-~p~~~g 150 (395)
..+.+.+...+.+.++++..+ ++..++. .. +.. ++..+.||+||+||| +.+. .|.+||
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~----~~--v~v~~~~~~~~~d~lviAtG--~~p~~~p~i~G 174 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE----HT--LELSVTGERISAEKILIATG--AKIVSNSAIKG 174 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET----TE--EEETTTCCEEEEEEEEECCC--EEECCC--CBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC----CE--EEEecCCeEEEeCEEEEccC--CCcccCCCCCC
Confidence 133444555666778887655 3444432 32 555 347899999999999 6787 888888
Q ss_pred CCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 151 ISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
.+. ..+...+.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..+. .+...
T Consensus 175 ~~~----~~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-----~~~~~------ 237 (484)
T 3o0h_A 175 SDL----CLTSNEIFD-LEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY-----DLRQL------ 237 (484)
T ss_dssp GGG----SBCTTTGGG-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHH------
T ss_pred ccc----cccHHHHHh-HHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH-----HHHHH------
Confidence 652 122222222 23468999999999999999999999999999999988 55544322 11111
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC----eEEEe
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK----GAEFV 304 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~ 304 (395)
+.+.+++.+++++.+ |+++... .+.+.
T Consensus 238 -----------------------------------------------l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~ 270 (484)
T 3o0h_A 238 -----------------------------------------------LNDAMVAKGISIIYEATVSQVQSTENCYNVVLT 270 (484)
T ss_dssp -----------------------------------------------HHHHHHHHTCEEESSCCEEEEEECSSSEEEEET
T ss_pred -----------------------------------------------HHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEEC
Confidence 122233335556544 6666543 47778
Q ss_pred CCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHHH
Q 039923 305 NRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADDI 380 (395)
Q Consensus 305 ~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~i 380 (395)
+|+++++|.||+|+|++|+...+ ++..++. ++++|++.+| .+++|+.|+|||+|||+..+. .|..||+.+|++|
T Consensus 271 ~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~-~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i 348 (484)
T 3o0h_A 271 NGQTICADRVMLATGRVPNTTGLGLERAGVK-VNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNA 348 (484)
T ss_dssp TSCEEEESEEEECCCEEECCTTCCHHHHTCC-BCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEcCEEEEeeCCCcCCCCCChhhcCce-ECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHH
Confidence 89899999999999999998544 5677888 8899999999 788899999999999998655 8999999999999
Q ss_pred Hhhh
Q 039923 381 ASQW 384 (395)
Q Consensus 381 ~~~~ 384 (395)
.+.-
T Consensus 349 ~~~~ 352 (484)
T 3o0h_A 349 FENT 352 (484)
T ss_dssp HC--
T ss_pred cCCC
Confidence 8753
No 65
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.3e-34 Score=277.58 Aligned_cols=303 Identities=16% Similarity=0.206 Sum_probs=196.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc-CCcCce-eeecCC---ccccCCCCCCCCCCCCCCCHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL-KIYDHL-QLHLPK---QFCQLPYVPFPREYPAYPSGQ 84 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~-~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|.+|++.|++|+|||++. +||++.+ ...|.. .+.... .....+.+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4899999999999999999999999999999974 8886532 111110 000000 0000011100000 0112345
Q ss_pred HHHHHHHHHHHHcCCccc------cCceEE--EEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCc
Q 039923 85 QFITYMEAYANHFEIEPL------LGQEVQ--WAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFR 155 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~------~~~~V~--~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~ 155 (395)
++.++++....++...+. ....+. .....+ .++|++++ .++.||+||+||| ++|..|++++...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~---~~~v~~~~~~~~~~d~lViATG--s~p~~p~~~~~~~-- 158 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD---EHTLQVDDHSQVIAKRIVIATG--SRPNYPEFLAAAG-- 158 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE---TTEEEETTTEEEEEEEEEECCC--EECCCCHHHHTTG--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec---CCEEEEcCCcEEEeCEEEEccC--CCCcCCCCCCccC--
Confidence 555555444433221110 000010 011111 12366644 8899999999999 7888887655332
Q ss_pred ccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHH
Q 039923 156 GRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVD 235 (395)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (395)
..+.++..... ....+++++|||+|.+|+|+|..|.+.|.+|++++|.+ +++|..+. .+...
T Consensus 159 ~~v~t~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~~----------- 220 (492)
T 3ic9_A 159 SRLLTNDNLFE-LNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDE-----EMKRY----------- 220 (492)
T ss_dssp GGEECHHHHTT-CSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCH-----HHHHH-----------
T ss_pred CcEEcHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCH-----HHHHH-----------
Confidence 23333333322 23468999999999999999999999999999999998 55554332 11111
Q ss_pred HHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC--e--EEEe--CC-
Q 039923 236 RFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--G--AEFV--NR- 306 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~--v~~~--~g- 306 (395)
+.+.+++. |+++.+ |+++... + +.+. +|
T Consensus 221 ------------------------------------------l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~ 257 (492)
T 3ic9_A 221 ------------------------------------------AEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQ 257 (492)
T ss_dssp ------------------------------------------HHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCC
T ss_pred ------------------------------------------HHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCc
Confidence 12233334 666544 5565432 2 4444 67
Q ss_pred -cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHHHH
Q 039923 307 -TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADDIA 381 (395)
Q Consensus 307 -~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~i~ 381 (395)
+++++|.|++|+|++|+...+ ++..++. ++++|++.+|+.+++|+.|+|||+|||+..+. .|..||+.+|.+|.
T Consensus 258 ~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~-~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 336 (492)
T 3ic9_A 258 KTTESFQYVLAATGRKANVDKLGLENTSIE-LDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAG 336 (492)
T ss_dssp EEEEEESEEEECSCCEESCSSSCGGGSCCC-BCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHH
T ss_pred eEEEECCEEEEeeCCccCCCCCChhhcCCE-ECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHc
Confidence 689999999999999998544 6777898 88999999886688899999999999997765 89999999999999
Q ss_pred hh
Q 039923 382 SQ 383 (395)
Q Consensus 382 ~~ 383 (395)
+.
T Consensus 337 ~~ 338 (492)
T 3ic9_A 337 AY 338 (492)
T ss_dssp HT
T ss_pred CC
Confidence 74
No 66
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.5e-33 Score=266.67 Aligned_cols=300 Identities=19% Similarity=0.209 Sum_probs=201.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCceee-ecCC---ccccCCCCCCCCCCCCCCCHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQL-HLPK---QFCQLPYVPFPREYPAYPSGQQ 85 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
+||+|||||++|+++|.+|++.|++|+|||+++.+||+|.... .+...+ .... .... ..+..+.. ....+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVK-GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEEC-CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccC-CCccCHHH
Confidence 6899999999999999999999999999999988998765311 111000 0000 0000 00000000 00011122
Q ss_pred -----------HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCC
Q 039923 86 -----------FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEF 154 (395)
Q Consensus 86 -----------~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~ 154 (395)
+...+...+++.+++++.++.+. + +. ..+.+.+++.++.||+||+||| +.|..|+++|.+..
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~--~~~~v~~~g~~~~~d~lviAtG--~~p~~~~~~g~~~~ 152 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF-L--SE--RKVLVEETGEELEARYILIATG--SAPLIPPWAQVDYE 152 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-S--SS--SEEEETTTCCEEEEEEEEECCC--EEECCCTTBCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CeEEEeeCCEEEEecEEEECCC--CCCCCCCCCCCCcC
Confidence 22233456667788887775432 1 22 5555544347899999999999 67888888876531
Q ss_pred cccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHH
Q 039923 155 RGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVV 234 (395)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (395)
.+.+....... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+. .+...+
T Consensus 153 --~v~~~~~~~~~-~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~-----~~~~~l--------- 214 (455)
T 2yqu_A 153 --RVVTSTEALSF-PEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDL-----EVSRAA--------- 214 (455)
T ss_dssp --SEECHHHHTCC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHHHHH---------
T ss_pred --cEechHHhhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCH-----HHHHHH---------
Confidence 23444333322 2357899999999999999999999999999999988 56554322 122211
Q ss_pred HHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--Ce--EEEeCCcE
Q 039923 235 DRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--KG--AEFVNRTV 308 (395)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~--v~~~~g~~ 308 (395)
.+.+++.+++++.+ |.+++. ++ +.+.+|++
T Consensus 215 --------------------------------------------~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~ 250 (455)
T 2yqu_A 215 --------------------------------------------ERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEV 250 (455)
T ss_dssp --------------------------------------------HHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCE
T ss_pred --------------------------------------------HHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeE
Confidence 12222234555543 556543 22 44557889
Q ss_pred ecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHHHHhh
Q 039923 309 KEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADDIASQ 383 (395)
Q Consensus 309 i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~i~~~ 383 (395)
+++|.||+|+|.+|+...+ ++..++. ++++|++.+| ++++++.|+||++|||+..+. .|..||+.+|++|.+.
T Consensus 251 i~~D~vv~A~G~~p~~~~l~~~~~g~~-~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 251 LEADRVLVAVGRRPYTEGLSLENAGLS-TDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp EEESEEEECSCEEECCTTCCGGGGTCC-CCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEcCEEEECcCCCcCCCCCChhhcCCc-cCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 9999999999999998443 5677888 7778999998 678899999999999998765 7899999999999874
No 67
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=5.3e-34 Score=272.19 Aligned_cols=299 Identities=16% Similarity=0.199 Sum_probs=198.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC-cCcee-eecCCc---cccCCCC-CCCCCCCCCCCH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI-YDHLQ-LHLPKQ---FCQLPYV-PFPREYPAYPSG 83 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~-~~~~~-~~~~~~---~~~~~~~-~~~~~~~~~~~~ 83 (395)
.+||+|||||++|+++|.+|++.|++|+|||++ .+||+|.+.. ++... +..... ....+.+ ..+.. ......
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccCH
Confidence 479999999999999999999999999999998 7888775321 11000 000000 0011111 01000 111122
Q ss_pred HHHH-------HHHH-----HHHHHc-CCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCC
Q 039923 84 QQFI-------TYME-----AYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPK 147 (395)
Q Consensus 84 ~~~~-------~~~~-----~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~ 147 (395)
..+. ++++ ..+++. +++++.+ ++..++ . ..+++.+.+ .++.||+||+||| +.|..|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~--~--~~~~v~~~~g~~~~~~~d~lviAtG--s~p~~p~ 154 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD--D--QSLTVRLNEGGERVVMFDRCLVATG--ASPAVPP 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE--T--TEEEEEETTSSEEEEECSEEEECCC--EEECCCC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc--C--CEEEEEeCCCceEEEEeCEEEEeCC--CCCCCCC
Confidence 2222 2222 233444 6666544 344443 2 456676653 6799999999999 7888999
Q ss_pred CCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHh
Q 039923 148 IPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLK 227 (395)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~ 227 (395)
+||.+... +++.....+. ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++| .+. .+...
T Consensus 155 i~G~~~~~--~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~-----~~~~~--- 221 (467)
T 1zk7_A 155 IPGLKESP--YWTSTEALAS-DTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-EDP-----AIGEA--- 221 (467)
T ss_dssp CTTTTTSC--CBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SCH-----HHHHH---
T ss_pred CCCCCcCc--eecHHHHhcc-cccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CCH-----HHHHH---
Confidence 99876421 2222222211 2357999999999999999999999999999999988 5555 221 11111
Q ss_pred hCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC--e--E
Q 039923 228 WFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK--G--A 301 (395)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~--v 301 (395)
+.+.+++.+++++.+ |.++... . +
T Consensus 222 --------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v 251 (467)
T 1zk7_A 222 --------------------------------------------------VTAAFRAEGIEVLEHTQASQVAHMDGEFVL 251 (467)
T ss_dssp --------------------------------------------------HHHHHHHTTCEEETTCCEEEEEEETTEEEE
T ss_pred --------------------------------------------------HHHHHHhCCCEEEcCCEEEEEEEeCCEEEE
Confidence 222333345566544 5555432 2 3
Q ss_pred EEeCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHH
Q 039923 302 EFVNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVA 377 (395)
Q Consensus 302 ~~~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a 377 (395)
.+ ++.++++|.||+|+|.+|+...+ ++..++. ++++|++.+| ++++++.|+||++|||+..+. .|..||+.+|
T Consensus 252 ~~-~~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~-~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa 328 (467)
T 1zk7_A 252 TT-THGELRADKLLVATGRTPNTRSLALDAAGVT-VNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAA 328 (467)
T ss_dssp EE-TTEEEEESEEEECSCEEESCTTSCGGGGTCC-BCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHH
T ss_pred EE-CCcEEEcCEEEECCCCCcCCCcCCchhcCCc-CCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHH
Confidence 44 35689999999999999998543 5677888 7789999998 678899999999999998765 8999999999
Q ss_pred HHHHhh
Q 039923 378 DDIASQ 383 (395)
Q Consensus 378 ~~i~~~ 383 (395)
.+|.+.
T Consensus 329 ~~i~~~ 334 (467)
T 1zk7_A 329 INMTGG 334 (467)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 999864
No 68
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=100.00 E-value=1e-32 Score=263.44 Aligned_cols=336 Identities=21% Similarity=0.287 Sum_probs=205.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-----CCEEEEecCCCcccccccCCc-CceeeecCC--cccc--CCCCCC------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG-----VPSLIIEKESCLASLWKLKIY-DHLQLHLPK--QFCQ--LPYVPF------ 73 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g-----~~v~lie~~~~~~g~~~~~~~-~~~~~~~~~--~~~~--~~~~~~------ 73 (395)
++||+|||||++|+++|..|++.| .+|+|||+.+.+| |....+ +...+..+. .+.. .+...+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999877 544332 222221100 0000 000000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCC-CCcE--EEEEcc-E----EEEeCEEEEe
Q 039923 74 ---------PREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAA-MGHW--RVKTHE-Y----EFMCRWLIVA 136 (395)
Q Consensus 74 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~-~~~~--~v~~~~-~----~~~~d~lVlA 136 (395)
......++.+.++.+|++++++++++.++++++|++++..++ .+.| +|++.+ . ++.||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 001123567899999999999999999999999999988722 1443 566554 2 8999999999
Q ss_pred eCCCCCCCCCCCCCCCCCcc--cEeecCCCCCCc-CC-----CCCeEEEECCCcCHHHHHHHHhhC--CCeEEEEEecCc
Q 039923 137 TGENEVPVLPKIPGISEFRG--RLLHTSTYKNGV-EF-----RASKVLVVGCGNSGMEISFDLCKN--GAQVSLVVRDKV 206 (395)
Q Consensus 137 tG~~~~~~~p~~~g~~~~~~--~~~~~~~~~~~~-~~-----~~~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~~ 206 (395)
|| +.|.+|.. ++.+.+ .++++..+.+.. .. .+++|+|||+|.+|+|+|..|.+. +.+|++++|++
T Consensus 188 tG--~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~- 262 (463)
T 3s5w_A 188 PG--GTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS- 262 (463)
T ss_dssp CC--CEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS-
T ss_pred CC--CCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC-
Confidence 99 56766652 223333 567776654422 22 588999999999999999999998 88999999999
Q ss_pred eeeeccccCCChhHHHHHH--------HhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhh
Q 039923 207 HILPKKILGRSSFAISVWL--------LKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGA 278 (395)
Q Consensus 207 ~~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 278 (395)
.++|.+.. .+...+ ...++......+........ ..++ ++......
T Consensus 263 ~~~p~~~~-----~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~----------------~~~~~~~~ 316 (463)
T 3s5w_A 263 ALKPADDS-----PFVNEVFAPKFTDLIYSREHAERERLLREYHNTN-----YSVV----------------DTDLIERI 316 (463)
T ss_dssp SCCBCCCC-----HHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGT-----SSCB----------------CHHHHHHH
T ss_pred CCcCccCC-----ccchhccChhHHHHHhcCCHHHHHHHHHHhhccC-----CCcC----------------CHHHHHHH
Confidence 67776543 221111 11122222222222111000 0000 01101111
Q ss_pred -----Hhhhhc-CCeEEecC--ccEEecC--e--EEEe---CCcE--ecCcEEEEcCCCCCC-CCccccccccccccCCC
Q 039923 279 -----FAKIKS-GEIKVVPG--IQKFTAK--G--AEFV---NRTV--KEFDSIILATGYRSN-VSSWLKEASLFNQKNNN 340 (395)
Q Consensus 279 -----~~~~~~-~~v~~~~~--v~~~~~~--~--v~~~---~g~~--i~~D~vi~atG~~~~-~~~~~~~~~l~~~~~~g 340 (395)
.+.+.. .++++..+ |+++... + +.+. +|+. +++|.||+|||++|+ ...++..+... . |
T Consensus 317 ~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~-~---g 392 (463)
T 3s5w_A 317 YGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEY-L---G 392 (463)
T ss_dssp HHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGG-B---C
T ss_pred HHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHH-h---C
Confidence 111111 46777766 6666543 2 5555 6664 999999999999998 22566655433 2 6
Q ss_pred CCCCCCCCCCC-C----CCCeEEEEeccccc-----c---cchhhHHHHHHHHHhhh
Q 039923 341 NPQDSYPKNWK-G----KNGVYSVGFARQGL-----L---GISMDAHKVADDIASQW 384 (395)
Q Consensus 341 ~~~~~~~~~~~-~----~~~iya~Gd~~~~~-----~---~a~~~g~~~a~~i~~~~ 384 (395)
.+.+| ..+++ . .++||++|||...- . .|..++..+ +.|.+.+
T Consensus 393 ~i~v~-~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~-~~~~~~~ 447 (463)
T 3s5w_A 393 DHEIG-RDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEIS-GSLYQHL 447 (463)
T ss_dssp --CCC-TTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHH-HHHHHHH
T ss_pred CcccC-cccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHH-HHHHhhc
Confidence 77777 34442 2 56799999997421 1 555666655 4444444
No 69
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.5e-32 Score=261.23 Aligned_cols=296 Identities=19% Similarity=0.255 Sum_probs=198.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC-CcCcee-eecC---CccccCCC---CCCCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK-IYDHLQ-LHLP---KQFCQLPY---VPFPREYPAYP 81 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~-~~~~~~-~~~~---~~~~~~~~---~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|.+|++.|++|+|||+ ..+||+|... ..+.-. +... ..+..+.. +..+.. ....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCcc
Confidence 48999999999999999999999999999999 6788876531 111100 0000 00000110 111100 1112
Q ss_pred CHHHHHHH-----------HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCC-CC
Q 039923 82 SGQQFITY-----------MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPK-IP 149 (395)
Q Consensus 82 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~-~~ 149 (395)
+.+.+..+ ....+++.+++++.++.+. ++ + .. +++++.++.||+||+||| +.|..|+ ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~--~~--v~v~~~~~~~d~lviATG--s~p~~~~~~~ 153 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--G--KQ--VEVDGQRIQCEHLLLATG--SSSVELPMLP 153 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--T--TE--EEETTEEEECSEEEECCC--EEECCBTTBC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--C--CE--EEEeeEEEEeCEEEEeCC--CCCCCCCCCC
Confidence 33333332 3456677789988776543 32 2 33 666668899999999999 6676664 44
Q ss_pred CCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhC
Q 039923 150 GISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWF 229 (395)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (395)
.+ ..+.+........ ..+++++|||+|.+|+|+|..|++.|.+|+++++.+ +++|..+. .+...+
T Consensus 154 -~~---~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l---- 218 (458)
T 1lvl_A 154 -LG---GPVISSTEALAPK-ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTYDS-----ELTAPV---- 218 (458)
T ss_dssp -CB---TTEECHHHHTCCS-SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----HHHHHH----
T ss_pred -cc---CcEecHHHHhhhh-ccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----HHHHHH----
Confidence 22 1334444333322 257899999999999999999999999999999998 56553222 111111
Q ss_pred ChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEe--C
Q 039923 230 PVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFV--N 305 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~--~ 305 (395)
.+.+++.+|+++.+ |.+++..++.+. +
T Consensus 219 -------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~ 249 (458)
T 1lvl_A 219 -------------------------------------------------AESLKKLGIALHLGHSVEGYENGCLLANDGK 249 (458)
T ss_dssp -------------------------------------------------HHHHHHHTCEEETTCEEEEEETTEEEEECSS
T ss_pred -------------------------------------------------HHHHHHCCCEEEECCEEEEEEeCCEEEEECC
Confidence 22222334555544 566654334444 5
Q ss_pred C--cEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc---cchhhHHHHHHH
Q 039923 306 R--TVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL---GISMDAHKVADD 379 (395)
Q Consensus 306 g--~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~---~a~~~g~~~a~~ 379 (395)
| +++++|.|++|+|++|+...+ ++..++. ++++ ++.+| ++++|+.|+|||+|||+..+. .|..||+.+|++
T Consensus 250 G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~-~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~ 326 (458)
T 1lvl_A 250 GGQLRLEADRVLVAVGRRPRTKGFNLECLDLK-MNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEI 326 (458)
T ss_dssp SCCCEECCSCEEECCCEEECCSSSSGGGSCCC-EETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHH
T ss_pred CceEEEECCEEEECcCCCcCCCCCCcHhcCCc-ccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHH
Confidence 6 589999999999999998543 5677887 6666 88888 678899999999999998765 889999999999
Q ss_pred HHhh
Q 039923 380 IASQ 383 (395)
Q Consensus 380 i~~~ 383 (395)
|.+.
T Consensus 327 i~g~ 330 (458)
T 1lvl_A 327 IAGK 330 (458)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 9863
No 70
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.1e-33 Score=266.77 Aligned_cols=285 Identities=17% Similarity=0.159 Sum_probs=196.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV--PSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.+||+|||||++|+++|..|++.|. +|+|||++++++ |.... .+..+... . ...+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~--l~~~~~~~--~---------~~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLPP--LSKAYLAG--K---------ATAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSGG--GGTTTTTT--C---------SCSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCCC--CcHHHhCC--C---------CChHHhc
Confidence 5799999999999999999999998 799999987543 11100 00100000 0 0001111
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcc--cEeecCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRG--RLLHTSTY 164 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~--~~~~~~~~ 164 (395)
....+.+++.+++++.+++|+.++..+ . .|++++ +++.||+||+||| +.|..|++||.+. .+ .+......
T Consensus 64 ~~~~~~~~~~gv~~~~~~~v~~i~~~~--~--~v~~~~g~~~~~d~lviAtG--~~p~~~~i~G~~~-~~~~~v~~~~~~ 136 (431)
T 1q1r_A 64 LRTPDAYAAQNIQLLGGTQVTAINRDR--Q--QVILSDGRALDYDRLVLATG--GRPRPLPVASGAV-GKANNFRYLRTL 136 (431)
T ss_dssp SSCHHHHHHTTEEEECSCCEEEEETTT--T--EEEETTSCEEECSEEEECCC--EEECCCGGGTTHH-HHSTTEEESSSH
T ss_pred ccCHHHHHhCCCEEEeCCEEEEEECCC--C--EEEECCCCEEECCEEEEcCC--CCccCCCCCCccc-CCCceEEEECCH
Confidence 011234456789999999999998754 3 366665 7899999999999 6888888888642 11 02222211
Q ss_pred CCC-----cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHH
Q 039923 165 KNG-----VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLL 239 (395)
Q Consensus 165 ~~~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (395)
.+. ....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++++... ..+...
T Consensus 137 ~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~----~~~~~~--------------- 196 (431)
T 1q1r_A 137 EDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERVTA----PPVSAF--------------- 196 (431)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSC----HHHHHH---------------
T ss_pred HHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccchhh----HHHHHH---------------
Confidence 110 12358999999999999999999999999999999987 44443111 011111
Q ss_pred HhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec----C---eEEEeCCcEec
Q 039923 240 FCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA----K---GAEFVNRTVKE 310 (395)
Q Consensus 240 ~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~----~---~v~~~~g~~i~ 310 (395)
+.+.+++.++++..+ |.++.. . .+.+.+|++++
T Consensus 197 --------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~ 238 (431)
T 1q1r_A 197 --------------------------------------YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLP 238 (431)
T ss_dssp --------------------------------------HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEE
T ss_pred --------------------------------------HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEE
Confidence 122222334555544 666653 1 46778899999
Q ss_pred CcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc-------------cchhhHHHHH
Q 039923 311 FDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL-------------GISMDAHKVA 377 (395)
Q Consensus 311 ~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~-------------~a~~~g~~~a 377 (395)
+|.||+|+|++|+. .+++..++. .+ +| +.+| ++++|+.|+|||+|||+..+. .|..||+.+|
T Consensus 239 ~D~Vv~a~G~~p~~-~l~~~~gl~-~~-~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa 313 (431)
T 1q1r_A 239 ADLVIAGIGLIPNC-ELASAAGLQ-VD-NG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIA 313 (431)
T ss_dssp CSEEEECCCEEECC-HHHHHTTCC-BS-SS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHH
T ss_pred cCEEEECCCCCcCc-chhhccCCC-CC-CC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHH
Confidence 99999999999997 577888887 44 56 7787 678999999999999986531 5899999999
Q ss_pred HHHHhhh
Q 039923 378 DDIASQW 384 (395)
Q Consensus 378 ~~i~~~~ 384 (395)
++|.+..
T Consensus 314 ~~i~g~~ 320 (431)
T 1q1r_A 314 AILCGKV 320 (431)
T ss_dssp HHHTTCC
T ss_pred HHhcCCC
Confidence 9998753
No 71
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=2.8e-33 Score=265.68 Aligned_cols=284 Identities=18% Similarity=0.218 Sum_probs=197.6
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
+||+|||||++|+++|..|++. |.+|+|||+++.++.. .+ ++....... . ...+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--~~---~~~~~~~~~------~---------~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL--SA---GMQLYLEGK------V---------KDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC--GG---GHHHHHTTS------S---------CCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc--cc---cchhhhcCc------c---------CCHHHhhc
Confidence 3799999999999999999998 8999999998765411 10 000000000 0 00111111
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE-c-c--EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT-H-E--YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTY 164 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~-~-~--~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~ 164 (395)
+..+.+++.+++++.+++|..++..+ +.+.+.. . + .++.||+||+||| +.|..|++||.+. . .+++...+
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~~~~~~~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~-~-~v~~~~~~ 134 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPKE--HQVTVKDLVSGEERVENYDKLIISPG--AVPFELDIPGKDL-D-NIYLMRGR 134 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETTT--TEEEEEETTTCCEEEEECSEEEECCC--EEECCCCSTTTTS-B-SEECCCHH
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCCC--CEEEEEecCCCceEEEeCCEEEEcCC--CCcCCCCCCCCCC-C-CeEEECCH
Confidence 22344456789988899999998766 6655554 1 2 3599999999999 7888899998753 1 23333222
Q ss_pred CCCc-------CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHH
Q 039923 165 KNGV-------EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRF 237 (395)
Q Consensus 165 ~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (395)
.+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++++... ..+.
T Consensus 135 ~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----~~~~--------------- 194 (447)
T 1nhp_A 135 QWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVYLD----KEFT--------------- 194 (447)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTCC----HHHH---------------
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-ccccccCC----HHHH---------------
Confidence 1110 1168999999999999999999999999999999988 44442111 0111
Q ss_pred HHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe----EEEeCCcEecC
Q 039923 238 LLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG----AEFVNRTVKEF 311 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~~~~g~~i~~ 311 (395)
..+.+.+++.+++++.+ |.++...+ +.+ ++.++++
T Consensus 195 --------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~ 235 (447)
T 1nhp_A 195 --------------------------------------DVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDA 235 (447)
T ss_dssp --------------------------------------HHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEEC
T ss_pred --------------------------------------HHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEEC
Confidence 11233344456666654 66665432 343 6678999
Q ss_pred cEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-----------c--cchhhHHHHHH
Q 039923 312 DSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-----------L--GISMDAHKVAD 378 (395)
Q Consensus 312 D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-----------~--~a~~~g~~~a~ 378 (395)
|.||+|+|.+|+. .+++.. ++ ++++|++.+| ++++|+.|+|||+|||+... . .|..||+.+|+
T Consensus 236 d~vi~a~G~~p~~-~~~~~~-~~-~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~ 311 (447)
T 1nhp_A 236 DLVVVAVGVRPNT-AWLKGT-LE-LHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVK 311 (447)
T ss_dssp SEEEECSCEEESC-GGGTTT-SC-BCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHH
T ss_pred CEEEECcCCCCCh-HHHHhh-hh-hcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHH
Confidence 9999999999997 466666 77 7788999999 68899999999999998631 1 79999999999
Q ss_pred HHHhh
Q 039923 379 DIASQ 383 (395)
Q Consensus 379 ~i~~~ 383 (395)
+|.+.
T Consensus 312 ~i~g~ 316 (447)
T 1nhp_A 312 NLEEP 316 (447)
T ss_dssp TSSSC
T ss_pred hhcCC
Confidence 99864
No 72
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.9e-33 Score=267.59 Aligned_cols=286 Identities=16% Similarity=0.251 Sum_probs=198.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
++||+|||||++|+++|..|++. |.+|+|||+++..+... + ++ +..... . ....+++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~--~---~~----~~~~~~--~---------~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQ--C---GL----PYVISG--A---------IASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCG--G---GH----HHHHTT--S---------SSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCC--C---Cc----chhhcC--C---------cCCHHHhh
Confidence 47999999999999999999997 88999999987654210 0 00 000000 0 00011111
Q ss_pred H-HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE-c-c--EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecC
Q 039923 88 T-YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT-H-E--YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTS 162 (395)
Q Consensus 88 ~-~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~-~-~--~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~ 162 (395)
. +.+.+.++++++++.+++|..++..+ +.+.+.. . + .++.||+||+||| +.|..|++||.+.. .+.+..
T Consensus 96 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~~~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~~--~v~~~~ 169 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDAKVRHEVTKVDTEK--KIVYAEHTKTKDVFEFSYDRLLIATG--VRPVMPEWEGRDLQ--GVHLLK 169 (480)
T ss_dssp SSCHHHHHHTTCCEEESSEEEEEEETTT--TEEEEEETTTCCEEEEECSEEEECCC--EEECCCCCBTTTSB--TEECCS
T ss_pred hcCHHHHHhhcCCEEEeCCEEEEEECCC--CEEEEEEcCCCceEEEEcCEEEECCC--CcccCCCCCCccCC--CEEEeC
Confidence 1 12233355689999899999998766 6666665 2 3 3799999999999 78888889987531 233332
Q ss_pred CCCCCc-------CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHH
Q 039923 163 TYKNGV-------EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVD 235 (395)
Q Consensus 163 ~~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (395)
...+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++..+. .+..
T Consensus 170 ~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~------------ 231 (480)
T 3cgb_A 170 TIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYDG-----DMAE------------ 231 (480)
T ss_dssp SHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSCH-----HHHH------------
T ss_pred CHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCCH-----HHHH------------
Confidence 222111 1168999999999999999999999999999999987 44442111 1111
Q ss_pred HHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe-E--EEeCCcEec
Q 039923 236 RFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG-A--EFVNRTVKE 310 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-v--~~~~g~~i~ 310 (395)
.+.+.+++.++++..+ |.++...+ + ...++.+++
T Consensus 232 -----------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~ 270 (480)
T 3cgb_A 232 -----------------------------------------YIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYK 270 (480)
T ss_dssp -----------------------------------------HHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEE
T ss_pred -----------------------------------------HHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEE
Confidence 1122233345555543 55665432 2 233556899
Q ss_pred CcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccccc-------------ccchhhHHHHH
Q 039923 311 FDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGL-------------LGISMDAHKVA 377 (395)
Q Consensus 311 ~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-------------~~a~~~g~~~a 377 (395)
+|.||+|+|++|+. .+++..++. ++++|++.+| ++++|+.|+|||+|||+... ..|..||+.+|
T Consensus 271 ~D~vi~a~G~~p~~-~~l~~~g~~-~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa 347 (480)
T 3cgb_A 271 ADLVLVSVGVKPNT-DFLEGTNIR-TNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAG 347 (480)
T ss_dssp CSEEEECSCEEESC-GGGTTSCCC-BCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHH
T ss_pred cCEEEECcCCCcCh-HHHHhCCcc-cCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHH
Confidence 99999999999997 577888888 7889999999 68899999999999998421 27999999999
Q ss_pred HHHHhh
Q 039923 378 DDIASQ 383 (395)
Q Consensus 378 ~~i~~~ 383 (395)
++|.+.
T Consensus 348 ~~i~g~ 353 (480)
T 3cgb_A 348 LNMLDK 353 (480)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999864
No 73
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=9.5e-32 Score=257.68 Aligned_cols=343 Identities=19% Similarity=0.204 Sum_probs=205.6
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCC--------------CEEEEecCCCcccccccCC-cCceeeecCC--ccccC--
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGV--------------PSLIIEKESCLASLWKLKI-YDHLQLHLPK--QFCQL-- 68 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~--------------~v~lie~~~~~~g~~~~~~-~~~~~~~~~~--~~~~~-- 68 (395)
...+||||||+||+||++|..|.+.|. ..+.+|+.+.++ |+..+ +++.+++.+. .+...
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~ 114 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRD 114 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccC
Confidence 345899999999999999999987543 567778877655 55433 5555554331 11111
Q ss_pred CCC---------------CCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCC------CcEEEEEcc--
Q 039923 69 PYV---------------PFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAM------GHWRVKTHE-- 125 (395)
Q Consensus 69 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~------~~~~v~~~~-- 125 (395)
|.. ++..+-..++++.++.+|+++++++++..++++++|+++++.+.+ +.|+|++.+
T Consensus 115 P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 115 PRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp TTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCC
Confidence 110 112233568899999999999999998889999999999987643 258998764
Q ss_pred ----EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC------CcCCCCCeEEEECCCcCHHHHHHHHhhC-
Q 039923 126 ----YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN------GVEFRASKVLVVGCGNSGMEISFDLCKN- 194 (395)
Q Consensus 126 ----~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~a~e~a~~l~~~- 194 (395)
+++.++.||+||| ..|.+| +...+.+.++|+..+.+ .....+|+|+|||+|.||+|++..|++.
T Consensus 195 ~g~~~~~~ar~vVlatG--~~P~iP---~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~ 269 (501)
T 4b63_A 195 TGEISARRTRKVVIAIG--GTAKMP---SGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRY 269 (501)
T ss_dssp TCCEEEEEEEEEEECCC--CEECCC---TTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHS
T ss_pred CceEEEEEeCEEEECcC--CCCCCC---CCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcC
Confidence 6799999999999 555555 44455678999998864 4457899999999999999999999865
Q ss_pred -CCeEEEEEecCceeeeccccCCChhHHHHHH---HhhCChhHHHHHHHHhhhhhccc------------hhhcCCCCCC
Q 039923 195 -GAQVSLVVRDKVHILPKKILGRSSFAISVWL---LKWFPVDVVDRFLLFCSRLVLGD------------TKQIGIQRPK 258 (395)
Q Consensus 195 -g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------------~~~~gi~~~~ 258 (395)
+.+|+++.|++ .+.|..........+.+.. ...++...+............+. +-+..+..+.
T Consensus 270 ~~~~v~~~~R~~-~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~ 348 (501)
T 4b63_A 270 PNSRTTLIMRDS-AMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPD 348 (501)
T ss_dssp TTCEEEEECSSS-SCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSC
T ss_pred CCceEEEEeCCC-ccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCc
Confidence 67999999999 6667654422111111100 11122222222221111110000 0000010000
Q ss_pred CCCCcccCCCCCCcccChhhHhhhhcCCeEEecCccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCcccccc--ccccc
Q 039923 259 MGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPGIQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWLKEA--SLFNQ 336 (395)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~--~l~~~ 336 (395)
..+.. ......+.... .......+++++...+.+++..++.+.+|+++++|.||+||||+++.+.++... .+. .
T Consensus 349 ~~~~~-~~l~~~~~v~~--~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~-~ 424 (501)
T 4b63_A 349 ETQWQ-HRILPERKITR--VEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLR-P 424 (501)
T ss_dssp GGGCS-SEEECSEEEEE--EECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGS-S
T ss_pred ccccc-eeecCCcceee--eeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcC-c
Confidence 00000 00000000000 011112345555555566777889999999999999999999999876554332 344 5
Q ss_pred cCCCCCCCCCCCCC-------CCCCCeEEEEec
Q 039923 337 KNNNNPQDSYPKNW-------KGKNGVYSVGFA 362 (395)
Q Consensus 337 ~~~g~~~~~~~~~~-------~~~~~iya~Gd~ 362 (395)
|.+|.+.++.++.- ...++||+.|-+
T Consensus 425 d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 425 TGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp TTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred CcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 67777776633321 235779999864
No 74
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=9.4e-33 Score=266.16 Aligned_cols=301 Identities=16% Similarity=0.159 Sum_probs=193.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC--------CcccccccCC-cCceeeecCCcc----ccCCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES--------CLASLWKLKI-YDHLQLHLPKQF----CQLPYVPFPRE 76 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~--------~~~g~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 76 (395)
.+||+|||||++|+++|..|++.|.+|+|||+.+ .+||+|.+.. .|...+..+... .....+.+...
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4799999999999999999999999999999964 6788664321 111000000000 00000000000
Q ss_pred CCCCCCHHHHHHHHH-----------HHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCC
Q 039923 77 YPAYPSGQQFITYME-----------AYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEV 142 (395)
Q Consensus 77 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~ 142 (395)
.....+...+.++.+ ...++.+++++.+ ++..++ . ..+.|.+.+ .++.||+|||||| +.
T Consensus 112 ~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d--~--~~v~v~~~~g~~~~i~~d~lViATG--s~ 184 (519)
T 3qfa_A 112 ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIG--P--HRIKATNNKGKEKIYSAERFLIATG--ER 184 (519)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TEEEEECTTCCCCEEEEEEEEECCC--EE
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--C--CEEEEEcCCCCEEEEECCEEEEECC--CC
Confidence 011223333333332 2344456666544 343333 2 445565543 4899999999999 78
Q ss_pred CCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHH
Q 039923 143 PVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAIS 222 (395)
Q Consensus 143 ~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~ 222 (395)
|..|++||...+ +.++..+.. ....+++++|||+|.+|+|+|..+++.|.+||+++|+ .++|..+. .+.
T Consensus 185 p~~p~i~G~~~~---~~t~~~~~~-l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~l~~~d~-----~~~ 253 (519)
T 3qfa_A 185 PRYLGIPGDKEY---CISSDDLFS-LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--ILLRGFDQ-----DMA 253 (519)
T ss_dssp ECCCCCTTHHHH---CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCH-----HHH
T ss_pred cCCCCCCCccCc---eEcHHHHhh-hhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cccccCCH-----HHH
Confidence 888999986532 222222222 2345778999999999999999999999999999984 34444332 111
Q ss_pred HHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-----ccEEe
Q 039923 223 VWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-----IQKFT 297 (395)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----v~~~~ 297 (395)
.. +.+.+++.+|++..+ |+.+.
T Consensus 254 ~~-----------------------------------------------------~~~~l~~~GV~v~~~~~v~~v~~~~ 280 (519)
T 3qfa_A 254 NK-----------------------------------------------------IGEHMEEHGIKFIRQFVPIKVEQIE 280 (519)
T ss_dssp HH-----------------------------------------------------HHHHHHHTTCEEEESEEEEEEEEEE
T ss_pred HH-----------------------------------------------------HHHHHHHCCCEEEeCCeEEEEEEcc
Confidence 11 122233344555543 22332
Q ss_pred c---Ce--EE--EeCCc---EecCcEEEEcCCCCCCCCcc-cccccccccc-CCCCCCCCCCCCCCCCCCeEEEEecc-c
Q 039923 298 A---KG--AE--FVNRT---VKEFDSIILATGYRSNVSSW-LKEASLFNQK-NNNNPQDSYPKNWKGKNGVYSVGFAR-Q 364 (395)
Q Consensus 298 ~---~~--v~--~~~g~---~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~-~~g~~~~~~~~~~~~~~~iya~Gd~~-~ 364 (395)
+ .. +. ..++. ++++|.|++|+|++|+...+ ++..++. ++ ++|++.+| ++++|+.|+|||+|||+ .
T Consensus 281 ~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~-~~~~~G~I~Vd-~~~~Ts~~~IyA~GD~~~g 358 (519)
T 3qfa_A 281 AGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVK-INEKTGKIPVT-DEEQTNVPYIYAIGDILED 358 (519)
T ss_dssp CCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCC-CCTTTCCBCCC-TTSBCSSTTEEECGGGBSS
T ss_pred CCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcE-EcCCCCeEeeC-CCCccCCCCEEEEEeccCC
Confidence 2 22 22 23552 57899999999999998554 6777888 77 58999999 78899999999999998 4
Q ss_pred ccc---cchhhHHHHHHHHHhh
Q 039923 365 GLL---GISMDAHKVADDIASQ 383 (395)
Q Consensus 365 ~~~---~a~~~g~~~a~~i~~~ 383 (395)
.+. .|..||+.+|++|.+.
T Consensus 359 ~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 359 KVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp SCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCccHHHHHHHHHHHHHHHcCC
Confidence 333 8999999999999864
No 75
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.98 E-value=2.2e-32 Score=261.96 Aligned_cols=301 Identities=15% Similarity=0.173 Sum_probs=194.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC---------CcccccccCC-cCceeeecCCc----cccCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES---------CLASLWKLKI-YDHLQLHLPKQ----FCQLPYVPFP 74 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~---------~~~g~~~~~~-~~~~~~~~~~~----~~~~~~~~~~ 74 (395)
..+||+|||||++|+++|.+|++.|++|+|||+.. .+||+|.+.. .|...+..+.. ......+.+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 45899999999999999999999999999999521 3788765321 11100000000 0000000000
Q ss_pred CCCCCCCCHHHHHHHHHH-----------HHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--EEEEeCEEEEeeCCCC
Q 039923 75 REYPAYPSGQQFITYMEA-----------YANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE--YEFMCRWLIVATGENE 141 (395)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~--~~~~~d~lVlAtG~~~ 141 (395)
.......+...+.++.+. ..++.++++..+ ....++ . ..+.+.+.+ +++.||+||+||| +
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~--~--~~v~v~~~~g~~~~~~d~lviATG--s 160 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVD--S--HTLLAKLKSGERTITAQTFVIAVG--G 160 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TEEEEECTTCCEEEEEEEEEECCC--E
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEcc--C--CEEEEEeCCCeEEEEcCEEEEeCC--C
Confidence 000112233444443333 234456665433 232222 2 455566554 5799999999999 7
Q ss_pred CCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHH
Q 039923 142 VPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAI 221 (395)
Q Consensus 142 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~ 221 (395)
.|..|++||.+.+ .+++..... ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.. ++|..+. .+
T Consensus 161 ~p~~p~i~G~~~~---~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~-----~~ 229 (483)
T 3dgh_A 161 RPRYPDIPGAVEY---GITSDDLFS-LDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI--VLRGFDQ-----QM 229 (483)
T ss_dssp EECCCSSTTHHHH---CBCHHHHTT-CSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC--SSTTSCH-----HH
T ss_pred CcCCCCCCCcccc---cCcHHHHhh-hhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CCcccCH-----HH
Confidence 8888999987532 122222222 23357899999999999999999999999999998843 4443222 11
Q ss_pred HHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec-
Q 039923 222 SVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA- 298 (395)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~- 298 (395)
... +.+.+++.+|+++.+ |.++..
T Consensus 230 ~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~ 256 (483)
T 3dgh_A 230 AEL-----------------------------------------------------VAASMEERGIPFLRKTVPLSVEKQ 256 (483)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTTCCEEETEEEEEEEEC
T ss_pred HHH-----------------------------------------------------HHHHHHhCCCEEEeCCEEEEEEEc
Confidence 111 122233334555544 555543
Q ss_pred -C---eEEEeCCc-----EecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEeccc-ccc
Q 039923 299 -K---GAEFVNRT-----VKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQ-GLL 367 (395)
Q Consensus 299 -~---~v~~~~g~-----~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-~~~ 367 (395)
+ .+.+.++. ++++|.|++|+|++|+...+ ++..++. +++ |++.+| .+++|+.|+|||+|||+. .+.
T Consensus 257 ~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~-~~~-G~i~vd-~~~~t~~~~IyA~GD~~~~~~~ 333 (483)
T 3dgh_A 257 DDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVT-VQK-DKIPVD-SQEATNVANIYAVGDIIYGKPE 333 (483)
T ss_dssp TTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCC-CBT-TBBCCC-TTCBCSSTTEEECSTTBTTSCC
T ss_pred CCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCcc-ccC-CEEEEC-cCCccCCCCEEEEEcccCCCCc
Confidence 2 26666654 79999999999999998443 3777888 777 999998 778899999999999984 343
Q ss_pred ---cchhhHHHHHHHHHhh
Q 039923 368 ---GISMDAHKVADDIASQ 383 (395)
Q Consensus 368 ---~a~~~g~~~a~~i~~~ 383 (395)
.|..||+.+|++|.+.
T Consensus 334 ~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 334 LTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CHHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHHHHHcCC
Confidence 8999999999999875
No 76
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.98 E-value=2.9e-32 Score=261.37 Aligned_cols=303 Identities=14% Similarity=0.128 Sum_probs=195.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEec--------CCCcccccccCC-cCceeeecCC----ccccCCCCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEK--------ESCLASLWKLKI-YDHLQLHLPK----QFCQLPYVPFPR 75 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~--------~~~~~g~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~ 75 (395)
..+||+|||||++|+++|.+|++.|.+|+|||+ ...+||+|.... .|...+.... .......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 458999999999999999999999999999998 456888765321 1110000000 000000011000
Q ss_pred CCCCCCCHHHHHHHHH-----------HHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCC
Q 039923 76 EYPAYPSGQQFITYME-----------AYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENE 141 (395)
Q Consensus 76 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~ 141 (395)
..........+..+.+ ....+.++++..+ ++.. .+ ...+.+.+.+ .++.||+||+||| +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~---~~-~~~v~v~~~~g~~~~~~~d~lViATG--s 157 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASF---VD-EHTVRGVDKGGKATLLSAEHIVIATG--G 157 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEE---SS-SSEEEEECTTSCEEEEEEEEEEECCC--E
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEE---cc-CCeEEEEeCCCceEEEECCEEEEcCC--C
Confidence 0011233333333322 2344456665433 2322 22 1455565543 5899999999999 7
Q ss_pred CCCCCC-CCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhH
Q 039923 142 VPVLPK-IPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFA 220 (395)
Q Consensus 142 ~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~ 220 (395)
.|..|+ +||.... ..++..+.. ....+++++|||+|.+|+|+|..+.+.|.+|++++|.+ ++|..+. .
T Consensus 158 ~p~~p~~i~G~~~~---~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~-----~ 226 (488)
T 3dgz_A 158 RPRYPTQVKGALEY---GITSDDIFW-LKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGFDQ-----Q 226 (488)
T ss_dssp EECCCSSCBTHHHH---CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTSCH-----H
T ss_pred CCCCCCCCCCcccc---cCcHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccCCH-----H
Confidence 888888 8986431 122222222 23357889999999999999999999999999998864 3333221 1
Q ss_pred HHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec
Q 039923 221 ISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA 298 (395)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~ 298 (395)
+... +.+.+++.+|+++.+ +.++..
T Consensus 227 ~~~~-----------------------------------------------------l~~~l~~~gv~~~~~~~v~~i~~ 253 (488)
T 3dgz_A 227 MSSL-----------------------------------------------------VTEHMESHGTQFLKGCVPSHIKK 253 (488)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHTTCEEEETEEEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEE
Confidence 1111 223333445555544 455532
Q ss_pred ---C--eEEEeC---Cc--EecCcEEEEcCCCCCCCCcc-cccccccccc-CCCCCCCCCCCCCCCCCCeEEEEeccc-c
Q 039923 299 ---K--GAEFVN---RT--VKEFDSIILATGYRSNVSSW-LKEASLFNQK-NNNNPQDSYPKNWKGKNGVYSVGFARQ-G 365 (395)
Q Consensus 299 ---~--~v~~~~---g~--~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~-~~g~~~~~~~~~~~~~~~iya~Gd~~~-~ 365 (395)
. .+.+.+ |+ ++++|.|++|+|++|+...+ ++..++. ++ ++|++.+| .+++|+.|+|||+|||+. .
T Consensus 254 ~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~-~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~ 331 (488)
T 3dgz_A 254 LPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGIS-TNPKNQKIIVD-AQEATSVPHIYAIGDVAEGR 331 (488)
T ss_dssp CTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCC-BCSSSCCBCCC-TTSBCSSTTEEECGGGBTTC
T ss_pred cCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcE-ecCCCCeEeEC-CCCccCCCCEEEeEEecCCC
Confidence 2 244544 54 47999999999999998544 6777888 78 78999999 788999999999999973 3
Q ss_pred cc---cchhhHHHHHHHHHhhh
Q 039923 366 LL---GISMDAHKVADDIASQW 384 (395)
Q Consensus 366 ~~---~a~~~g~~~a~~i~~~~ 384 (395)
+. .|..||+.+|++|.+..
T Consensus 332 ~~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 332 PELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCC
T ss_pred CcchhHHHHHHHHHHHHHcCCC
Confidence 33 89999999999998753
No 77
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.98 E-value=1.2e-32 Score=260.48 Aligned_cols=292 Identities=16% Similarity=0.180 Sum_probs=203.3
Q ss_pred CCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE---RGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~---~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
+++|+|||||++|+++|..|++ .|++|+|||+.+.... . +.. ... ..+....+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~------~~~-~~~--------~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------V------PSN-PWV--------GVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------G------GGH-HHH--------HHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------c------CCc-ccc--------ccCccCHHHH
Confidence 5799999999999999999999 7999999999874321 0 000 000 0122344566
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCC
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYK 165 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~ 165 (395)
...+..++++.+++++ ..+|+.++... . +|++++ +++.||+||+||| +.+..|.+||++.+.+.....+...
T Consensus 62 ~~~l~~~~~~~gv~~~-~~~v~~id~~~--~--~V~~~~g~~i~~d~lviAtG--~~~~~~~ipG~~~~~~~~~~~~~~~ 134 (437)
T 3sx6_A 62 AFPIRHYVERKGIHFI-AQSAEQIDAEA--Q--NITLADGNTVHYDYLMIATG--PKLAFENVPGSDPHEGPVQSICTVD 134 (437)
T ss_dssp EEECHHHHHTTTCEEE-CSCEEEEETTT--T--EEEETTSCEEECSEEEECCC--CEECGGGSTTCSTTTSSEECCSSHH
T ss_pred HHHHHHHHHHCCCEEE-EeEEEEEEcCC--C--EEEECCCCEEECCEEEECCC--CCcCcccCCCCCcccCcceeccccc
Confidence 6666777778899986 46899998765 4 377766 7899999999999 6888888999876433333333332
Q ss_pred CCcC--------CCCCeEEEECCCcC----H--HHHH----HHHhhCCCe-----EEEEEecCceeeeccccCCChhHHH
Q 039923 166 NGVE--------FRASKVLVVGCGNS----G--MEIS----FDLCKNGAQ-----VSLVVRDKVHILPKKILGRSSFAIS 222 (395)
Q Consensus 166 ~~~~--------~~~~~v~VvG~G~~----a--~e~a----~~l~~~g~~-----V~~~~r~~~~~~p~~~~~~~~~~~~ 222 (395)
+... ..+++++|||+|.+ | +|+| ..+.+.|.+ |+++++.+ .+.+....+.
T Consensus 135 ~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~-~~~~~~l~~~------ 207 (437)
T 3sx6_A 135 HAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP-YIGHLGIQGV------ 207 (437)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-STTCTTTTCC------
T ss_pred HHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-cccccccCcc------
Confidence 2211 11456788998554 4 8887 455566764 99999887 3322111100
Q ss_pred HHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCe
Q 039923 223 VWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKG 300 (395)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~ 300 (395)
+.....+.+.+++.+|+++.+ |.++++++
T Consensus 208 -------------------------------------------------~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~ 238 (437)
T 3sx6_A 208 -------------------------------------------------GDSKGILTKGLKEEGIEAYTNCKVTKVEDNK 238 (437)
T ss_dssp -------------------------------------------------TTHHHHHHHHHHHTTCEEECSEEEEEEETTE
T ss_pred -------------------------------------------------hHHHHHHHHHHHHCCCEEEcCCEEEEEECCe
Confidence 001112334455567777766 88888888
Q ss_pred EEEeC---------CcEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCC-CCCCeEEEEeccccc----
Q 039923 301 AEFVN---------RTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWK-GKNGVYSVGFARQGL---- 366 (395)
Q Consensus 301 v~~~~---------g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~-~~~~iya~Gd~~~~~---- 366 (395)
+.+.+ ++++++|.+++++|+.++. .+.+..++ .+++|++.+| +++++ ++|||||+|||+..+
T Consensus 239 v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~-~~~~~~gl--~~~~G~i~Vd-~~l~t~~~~~Ifa~GD~~~~~~~~~ 314 (437)
T 3sx6_A 239 MYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP-AVAGVEGL--CNPGGFVLVD-EHQRSKKYANIFAAGIAIAIPPVET 314 (437)
T ss_dssp EEEEEECTTSCEEEEEEEECSEEEEECCEECCH-HHHTSTTT--BCTTSCBCBC-TTSBBSSCTTEEECGGGBCCCCSCC
T ss_pred EEEEecccCCccccceEEEEeEEEEcCCCcCch-hhhccccc--cCCCCcEEeC-hhccCCCCCCEEEEEEEeccCCcCC
Confidence 77765 6789999999999999874 34333466 5689999999 57776 899999999998642
Q ss_pred --------c---cchhhHHHHHHHHHhhhcccccc
Q 039923 367 --------L---GISMDAHKVADDIASQWNSETRH 390 (395)
Q Consensus 367 --------~---~a~~~g~~~a~~i~~~~~~~~~~ 390 (395)
. .|..||+.+|+||.+.+.+++..
T Consensus 315 ~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~ 349 (437)
T 3sx6_A 315 TPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGE 349 (437)
T ss_dssp CSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred CcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1 79999999999999999876543
No 78
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=9.3e-33 Score=264.15 Aligned_cols=285 Identities=19% Similarity=0.208 Sum_probs=190.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..++|||||||++|+++|.+|.+.+++|+|||++++.- |..+ ++... .+..+...+..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~-------~~Pl-------L~~va--------~G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL-------FTPL-------LPSAP--------VGTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE-------CGGG-------GGGTT--------TTSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc-------cccc-------hhHHh--------hccccHHHhhh
Confidence 35789999999999999999999999999999986320 1000 00000 01111122211
Q ss_pred HHHHHHH--HcCCccccCceEEEEEEcCCCCcEEEEE-------------------ccEEEEeCEEEEeeCCCCCCCCCC
Q 039923 89 YMEAYAN--HFEIEPLLGQEVQWAKYDAAMGHWRVKT-------------------HEYEFMCRWLIVATGENEVPVLPK 147 (395)
Q Consensus 89 ~~~~~~~--~~~~~~~~~~~V~~v~~~~~~~~~~v~~-------------------~~~~~~~d~lVlAtG~~~~~~~p~ 147 (395)
.++.... +.+++++ ..+|+.++... +.+++.. +..++.||+|||||| +.+..+.
T Consensus 99 p~~~~~~~~~~~v~~~-~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtG--s~~~~~~ 173 (502)
T 4g6h_A 99 PIVNFALKKKGNVTYY-EAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVG--AEPNTFG 173 (502)
T ss_dssp EHHHHHTTCSSCEEEE-EEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCC--CEECCTT
T ss_pred hHHHHHHhhcCCeEEE-EEEEEEEEhhh--CEEEEeecccceeecccccccccccCCceEEeCCEEEEcCC--cccccCC
Confidence 2222222 2244444 45788898876 5544432 126899999999999 7888899
Q ss_pred CCCCCCCcccEeecCCCCC----------------------CcCCCCCeEEEECCCcCHHHHHHHHhhC-----------
Q 039923 148 IPGISEFRGRLLHTSTYKN----------------------GVEFRASKVLVVGCGNSGMEISFDLCKN----------- 194 (395)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~v~VvG~G~~a~e~a~~l~~~----------- 194 (395)
+||++++. +......+ +......+++|||||.+|+|+|.+|.+.
T Consensus 174 ipG~~e~a---~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~ 250 (502)
T 4g6h_A 174 IPGVTDYG---HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPA 250 (502)
T ss_dssp CTTHHHHC---EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHH
T ss_pred ccCccccc---CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhccc
Confidence 99976421 11111111 0011235799999999999999998753
Q ss_pred ---CCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCC
Q 039923 195 ---GAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKT 271 (395)
Q Consensus 195 ---g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 271 (395)
..+|+++++.+ +++|..+. .++..
T Consensus 251 ~~~~~~V~lve~~~-~il~~~~~-----~~~~~----------------------------------------------- 277 (502)
T 4g6h_A 251 LAEEVQIHLVEALP-IVLNMFEK-----KLSSY----------------------------------------------- 277 (502)
T ss_dssp HHHHCEEEEECSSS-SSSTTSCH-----HHHHH-----------------------------------------------
T ss_pred ccccceeEEecccc-ccccCCCH-----HHHHH-----------------------------------------------
Confidence 25799999998 67665332 22222
Q ss_pred cccChhhHhhhhcCCeEEecC--ccEEecCeEEEe----CC----cEecCcEEEEcCCCCCCC--CccccccccccccCC
Q 039923 272 PVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFV----NR----TVKEFDSIILATGYRSNV--SSWLKEASLFNQKNN 339 (395)
Q Consensus 272 ~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~----~g----~~i~~D~vi~atG~~~~~--~~~~~~~~l~~~~~~ 339 (395)
..+.+++.+|+++.+ |.+++++++.+. || +++++|.||||+|.+|+. ..+....++. .+.+
T Consensus 278 ------~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~-~~~~ 350 (502)
T 4g6h_A 278 ------AQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQ-NSSK 350 (502)
T ss_dssp ------HHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGG-TTCC
T ss_pred ------HHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhcccc-ccCC
Confidence 223344456677766 788888876553 44 369999999999999983 1233444666 6788
Q ss_pred CCCCCCCCCCCC-CCCCeEEEEecccccc-----cchhhHHHHHHHHHhhh
Q 039923 340 NNPQDSYPKNWK-GKNGVYSVGFARQGLL-----GISMDAHKVADDIASQW 384 (395)
Q Consensus 340 g~~~~~~~~~~~-~~~~iya~Gd~~~~~~-----~a~~~g~~~a~~i~~~~ 384 (395)
|++.+| +++++ ++|+|||+|||+..+. .|..||..+|+||.+..
T Consensus 351 g~I~Vd-~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 351 RGLAVN-DFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp SSEEBC-TTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CceeEC-CccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 999999 67776 8999999999986543 89999999999998754
No 79
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.97 E-value=2.3e-32 Score=262.10 Aligned_cols=304 Identities=15% Similarity=0.153 Sum_probs=190.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC--------Cccccc--ccCCcCceeeec---------CCccccCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES--------CLASLW--KLKIYDHLQLHL---------PKQFCQLPY 70 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~--------~~~g~~--~~~~~~~~~~~~---------~~~~~~~~~ 70 (395)
.|||+||||||+|+.+|.++++.|.+|+|||+.. .+||+- .-|....+.+.. ....+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999999999999999743 467631 111110000000 000000000
Q ss_pred CCCCCCCCCCCC-H----HHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c-EEEEeCEEEEeeCCC
Q 039923 71 VPFPREYPAYPS-G----QQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E-YEFMCRWLIVATGEN 140 (395)
Q Consensus 71 ~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~-~~~~~d~lVlAtG~~ 140 (395)
.....+|..... . +.+.......+++.++++..+. . ...+. ..+.|... + ++++++++|||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~-a---~f~~~-~~v~V~~~~~~~~~~~i~a~~iiIATG-- 194 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL-A---KLKDK-NTVSYYLKGDLSKEETVTGKYILIATG-- 194 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE-E---EEEET-TEEEEEEC--CCCEEEEEEEEEEECCC--
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-E---EEcCC-CcceEeecccCCceEEEeeeeEEeccC--
Confidence 000001110000 0 1112222334455567654331 1 11111 44444332 2 7899999999999
Q ss_pred CCCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhH
Q 039923 141 EVPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFA 220 (395)
Q Consensus 141 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~ 220 (395)
++|..|+.++... ..++.+..+.+ ....+++++|||||.+|+|+|..+++.|.+||++.|+ .++|..+. .
T Consensus 195 s~P~~P~~~~~~~--~~~~ts~~~l~-l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~~L~~~D~-----e 264 (542)
T 4b1b_A 195 CRPHIPDDVEGAK--ELSITSDDIFS-LKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--IVLRGFDQ-----Q 264 (542)
T ss_dssp EEECCCSSSBTHH--HHCBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--CSSTTSCH-----H
T ss_pred CCCCCCCcccCCC--ccccCchhhhc-cccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--ccccccch-----h
Confidence 7888886443321 12233333333 3346899999999999999999999999999999875 45666554 3
Q ss_pred HHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec
Q 039923 221 ISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA 298 (395)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~ 298 (395)
++..+.. .+++.++.++.+ ++++..
T Consensus 265 i~~~l~~-----------------------------------------------------~l~~~gi~~~~~~~v~~~~~ 291 (542)
T 4b1b_A 265 CAVKVKL-----------------------------------------------------YMEEQGVMFKNGILPKKLTK 291 (542)
T ss_dssp HHHHHHH-----------------------------------------------------HHHHTTCEEEETCCEEEEEE
T ss_pred HHHHHHH-----------------------------------------------------HHHhhcceeecceEEEEEEe
Confidence 3332222 223334444444 444433
Q ss_pred C----eEEEeCCcEecCcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccc-cc---cc
Q 039923 299 K----GAEFVNRTVKEFDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQG-LL---GI 369 (395)
Q Consensus 299 ~----~v~~~~g~~i~~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-~~---~a 369 (395)
. .+.+.++.++++|.|++|+|.+|++..+ ++..++. ++.++.+++.+.+++|+.|+|||+|||+.+ +. .|
T Consensus 292 ~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~-~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A 370 (542)
T 4b1b_A 292 MDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMN-VNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVA 370 (542)
T ss_dssp ETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCC-EETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHH
T ss_pred cCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceee-ecccCceEeccccccccCCCeEEeccccCCchhHHHHH
Confidence 2 2566788889999999999999999655 5566777 677777644438899999999999999865 44 88
Q ss_pred hhhHHHHHHHHHhhh
Q 039923 370 SMDAHKVADDIASQW 384 (395)
Q Consensus 370 ~~~g~~~a~~i~~~~ 384 (395)
..+|+.++++|.+.-
T Consensus 371 ~~eg~~aa~~i~g~~ 385 (542)
T 4b1b_A 371 IKAGEILARRLFKDS 385 (542)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998754
No 80
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=4.9e-32 Score=254.43 Aligned_cols=283 Identities=16% Similarity=0.076 Sum_probs=194.1
Q ss_pred CCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE---RGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~---~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
|++|+|||||++|+++|..|++ .|++|+|||+++..+.... . + . ........+++
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~---~-------~-------~-----~~~~~~~~~~~ 58 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA---L-------P-------H-----VAIGVRDVDEL 58 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS---S-------C-------C-----CCSSCCCCCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc---h-------h-------h-----cccCCcCHHHH
Confidence 3689999999999999999999 8999999999874431100 0 0 0 00111122333
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCC
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTST 163 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~ 163 (395)
..++.+.+++.+++++.+ +|+.++..+ ..+++...+ .++.||+||+||| +.+..|.+||++. ...+...
T Consensus 59 ~~~~~~~~~~~gv~~~~~-~v~~i~~~~--~~V~~~~g~~~~~~~~~d~lViAtG--~~~~~~~ipG~~~---~~~~~~~ 130 (409)
T 3h8l_A 59 KVDLSEALPEKGIQFQEG-TVEKIDAKS--SMVYYTKPDGSMAEEEYDYVIVGIG--AHLATELVKGWDK---YGYSVCE 130 (409)
T ss_dssp EEEHHHHTGGGTCEEEEC-EEEEEETTT--TEEEEECTTSCEEEEECSEEEECCC--CEECGGGSBTHHH---HCEESSS
T ss_pred HHHHHHHHhhCCeEEEEe-eEEEEeCCC--CEEEEccCCcccceeeCCEEEECCC--CCcCccCCCChhh---cCcCcCC
Confidence 445566667779998776 898988765 443333222 4599999999999 6788888888764 2233433
Q ss_pred CCCCcCC------CCCeEEEECCCc-------------------------CHHHHHH----HHhhCCC----eEEEEEec
Q 039923 164 YKNGVEF------RASKVLVVGCGN-------------------------SGMEISF----DLCKNGA----QVSLVVRD 204 (395)
Q Consensus 164 ~~~~~~~------~~~~v~VvG~G~-------------------------~a~e~a~----~l~~~g~----~V~~~~r~ 204 (395)
+.+.... ..+.++|||+|. .++|+|. .+.+.|. +|+++.+.
T Consensus 131 ~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~ 210 (409)
T 3h8l_A 131 PEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPG 210 (409)
T ss_dssp TTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSS
T ss_pred HHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCC
Confidence 3322111 126677999992 3677774 4556663 89999887
Q ss_pred CceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhc
Q 039923 205 KVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKS 284 (395)
Q Consensus 205 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (395)
+ .+|.... .+.. .+.+.+++
T Consensus 211 ~--~l~~~~~-----~~~~-----------------------------------------------------~~~~~l~~ 230 (409)
T 3h8l_A 211 E--YLSDLSP-----NSRK-----------------------------------------------------AVASIYNQ 230 (409)
T ss_dssp S--SSTTBCH-----HHHH-----------------------------------------------------HHHHHHHH
T ss_pred c--cccccCH-----HHHH-----------------------------------------------------HHHHHHHH
Confidence 6 3332111 1111 12233334
Q ss_pred CCeEEecC--ccEEecCeEEEeCCcEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCC-CCCCeEEEEe
Q 039923 285 GEIKVVPG--IQKFTAKGAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWK-GKNGVYSVGF 361 (395)
Q Consensus 285 ~~v~~~~~--v~~~~~~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~-~~~~iya~Gd 361 (395)
.+|+++.+ |++++++++.+.+|+++++|.+|+++|+.|+ .++...+....+++|++.+| +++++ +.||||++||
T Consensus 231 ~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~--~~l~~~~~~l~~~~G~i~vd-~~~~~~~~~~vfa~GD 307 (409)
T 3h8l_A 231 LGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGN--PALKNSTPDLVDDGGFIPTD-LNMVSIKYDNVYAVGD 307 (409)
T ss_dssp HTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECC--HHHHTSCGGGSCTTSCBCBB-TTSBBSSCTTEEECGG
T ss_pred CCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCcc--HHHHhccccCcCCCCCEEeC-cccccCCCCCEEEeeh
Confidence 46777755 8899999999999999999999999999997 45666522214688999999 57776 8999999999
Q ss_pred cccc--cc---cchhhHHHHHHHHHhhhc
Q 039923 362 ARQG--LL---GISMDAHKVADDIASQWN 385 (395)
Q Consensus 362 ~~~~--~~---~a~~~g~~~a~~i~~~~~ 385 (395)
|+.. +. .|..||+.+|++|.+.+.
T Consensus 308 ~~~~~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 308 ANSMTVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp GBTTCCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hccCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 9963 22 899999999999999984
No 81
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=3.9e-30 Score=252.70 Aligned_cols=300 Identities=15% Similarity=0.183 Sum_probs=187.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecC-C-------Cccccccc-CCcCceeeecCC-------ccccCCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKE-S-------CLASLWKL-KIYDHLQLHLPK-------QFCQLPYVP 72 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~-~-------~~~g~~~~-~~~~~~~~~~~~-------~~~~~~~~~ 72 (395)
..+||+||||||+|+++|.+|++.|++|+|||+. + .+||+|.. ..+|...+.... ....+ ...
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~-g~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF-GWS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC-Ccc
Confidence 3589999999999999999999999999999973 2 25664322 111111000000 00000 000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHH-----------HcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeC
Q 039923 73 FPREYPAYPSGQQFITYMEAYAN-----------HFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATG 138 (395)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG 138 (395)
.+.. .......++.++++.+++ +.++++..+ ....++ . ..+.+...+ .++.||+||+|||
T Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~--~--~~v~v~~~~g~~~~~~~d~lviAtG 258 (598)
T 2x8g_A 185 LDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLIS--P--HEVQITDKNQKVSTITGNKIILATG 258 (598)
T ss_dssp CCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TEEEEECTTCCEEEEEEEEEEECCC
T ss_pred ccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcC--C--CEEEEEeCCCCeEEEEeCEEEEeCC
Confidence 0000 012234555555544332 335554332 232232 1 333343332 4799999999999
Q ss_pred CCCCCCCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCCh
Q 039923 139 ENEVPVLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSS 218 (395)
Q Consensus 139 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~ 218 (395)
+.|+.|++||.+.+ ..+...... ....+++++|||+|.+|+|+|..|++.|.+||+++|+ .++|..+.
T Consensus 259 --s~p~~p~i~G~~~~---~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~d~---- 326 (598)
T 2x8g_A 259 --ERPKYPEIPGAVEY---GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGFDQ---- 326 (598)
T ss_dssp --EEECCCSSTTHHHH---CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCH----
T ss_pred --CCCCCCCCCCcccc---eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcCCH----
Confidence 78888989986532 123322222 2245789999999999999999999999999999987 34343221
Q ss_pred hHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEE
Q 039923 219 FAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKF 296 (395)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~ 296 (395)
.+...+ .+.+++.+|++..+ +.++
T Consensus 327 -~~~~~~-----------------------------------------------------~~~l~~~gv~i~~~~~v~~v 352 (598)
T 2x8g_A 327 -QMAEKV-----------------------------------------------------GDYMENHGVKFAKLCVPDEI 352 (598)
T ss_dssp -HHHHHH-----------------------------------------------------HHHHHHTTCEEEETEEEEEE
T ss_pred -HHHHHH-----------------------------------------------------HHHHHhCCCEEEECCeEEEE
Confidence 111111 11222223444332 2222
Q ss_pred e--------c---CeE----EEeCCcEec--CcEEEEcCCCCCCCCcc-ccccccccccCCCCCCCCCCCCCCCCCCeEE
Q 039923 297 T--------A---KGA----EFVNRTVKE--FDSIILATGYRSNVSSW-LKEASLFNQKNNNNPQDSYPKNWKGKNGVYS 358 (395)
Q Consensus 297 ~--------~---~~v----~~~~g~~i~--~D~vi~atG~~~~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya 358 (395)
. . ..+ .+.+|++++ +|.||+|+|++|+...+ ++..+++ +|++|++.+| ++++|+.|+|||
T Consensus 353 ~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~-~~~~G~i~vd-~~~~ts~~~VyA 430 (598)
T 2x8g_A 353 KQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVK-LDKNGRVVCT-DDEQTTVSNVYA 430 (598)
T ss_dssp EEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCC-BCTTSCBCCC-TTSBCSSTTEEE
T ss_pred EeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCce-ECCCCcEEeC-CCCcCCCCCEEE
Confidence 1 1 222 234676554 99999999999998443 5677888 7889999999 678899999999
Q ss_pred EEecccc-cc---cchhhHHHHHHHHHhh
Q 039923 359 VGFARQG-LL---GISMDAHKVADDIASQ 383 (395)
Q Consensus 359 ~Gd~~~~-~~---~a~~~g~~~a~~i~~~ 383 (395)
+|||+.+ +. .|..||+.+|++|.+.
T Consensus 431 ~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 431 IGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp CGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 9999543 32 8999999999999874
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=5.3e-31 Score=249.19 Aligned_cols=298 Identities=17% Similarity=0.171 Sum_probs=193.1
Q ss_pred CCCeEEECCChHHHHHHHHHHH-c------CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-R------GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPS 82 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-~------g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (395)
.++|+|||||++|+++|..|++ . |++|+|||+.+.++|.|+.... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 3689999999999999999999 7 9999999999888887653211 22233
Q ss_pred HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecC
Q 039923 83 GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTS 162 (395)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~ 162 (395)
..++..++.+++++.+++++.+++| + .. |++++..+.||+||+|||+. .++.|.+||.+ +.+ +++..
T Consensus 60 ~~~~~~~~~~~~~~~~v~~~~~v~v------~--~~--v~~~~~~~~~d~lViAtG~~-~~~~~~ipG~~-~~g-v~~~~ 126 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRFFGNVVV------G--EH--VQPGELSERYDAVIYAVGAQ-SDRMLNIPGED-LPG-SIAAV 126 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEEEESCCB------T--TT--BCHHHHHHHSSEEEECCCCC-EECCCCCTTTT-STT-EEEHH
T ss_pred HHHHHHHHHHHHhcCCCEEEeeEEE------C--CE--EEECCCeEeCCEEEEeeCCC-CCCCCCCCCCC-CCC-cEEHH
Confidence 4567778888888888887766543 1 22 44444457899999999941 26777889875 333 33322
Q ss_pred CC-----------CCCcCCCCCeEEEECCCcCHHHHHHHHhhC--------------------C-CeEEEEEecCceeee
Q 039923 163 TY-----------KNGVEFRASKVLVVGCGNSGMEISFDLCKN--------------------G-AQVSLVVRDKVHILP 210 (395)
Q Consensus 163 ~~-----------~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~--------------------g-~~V~~~~r~~~~~~p 210 (395)
.+ ++.....+++|+|||+|.+|+|+|..|++. + ++|+++.|++ .+.+
T Consensus 127 ~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~-~~~~ 205 (456)
T 1lqt_A 127 DFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG-PLQA 205 (456)
T ss_dssp HHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC-GGGC
T ss_pred HHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC-hhhh
Confidence 11 222233689999999999999999999874 4 5899999987 3322
Q ss_pred ccccCCChhHHHHHHHhhCCh--------hH---HHHHHH---HhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccCh
Q 039923 211 KKILGRSSFAISVWLLKWFPV--------DV---VDRFLL---FCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDD 276 (395)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~---~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~ 276 (395)
.... ..+ ..+ ..+|. .+ ...... ....... .
T Consensus 206 ~f~~----~el-rel-~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~ 250 (456)
T 1lqt_A 206 AFTT----LEL-REL-ADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNI-----------------------------K 250 (456)
T ss_dssp CCCH----HHH-HHG-GGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHH-----------------------------H
T ss_pred ccCh----HHH-HHh-hcCCCceeeeChHHhccchhhhhhhccHHHHHHH-----------------------------H
Confidence 1110 000 000 00110 00 000000 0000000 0
Q ss_pred hhHhhhhc------CCeEEecC--ccEEecC----eEEEe----------------CC--cEecCcEEEEcCCCCCCCCc
Q 039923 277 GAFAKIKS------GEIKVVPG--IQKFTAK----GAEFV----------------NR--TVKEFDSIILATGYRSNVSS 326 (395)
Q Consensus 277 ~~~~~~~~------~~v~~~~~--v~~~~~~----~v~~~----------------~g--~~i~~D~vi~atG~~~~~~~ 326 (395)
.+.+.+.+ .+|+++.+ +.++.+. ++.+. +| ++++||.||+|+|++|+.
T Consensus 251 ~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-- 328 (456)
T 1lqt_A 251 VLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-- 328 (456)
T ss_dssp HHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC--
T ss_pred HHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC--
Confidence 01111112 34565544 5555443 24443 34 469999999999999986
Q ss_pred cccccccccccCCCCCCCCCCCCC-CCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhcc
Q 039923 327 WLKEASLFNQKNNNNPQDSYPKNW-KGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 327 ~~~~~~l~~~~~~g~~~~~~~~~~-~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~ 386 (395)
+ .+++ +|++|++.+| ..++ ++.|||||+|||+.++. .|+.+|..+|.+|...+.+
T Consensus 329 l---~gl~-~d~~g~i~vn-~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 329 T---PGLP-FDDQSGTIPN-VGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp C---TTSC-CBTTTTBCCE-ETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCCc-ccCCCCeeEC-CCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 2 4677 7788888888 5566 78999999999986654 5889999999999998864
No 83
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=6.8e-31 Score=248.73 Aligned_cols=304 Identities=16% Similarity=0.155 Sum_probs=191.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..++|+|||||++|+.+|..|++.| ++|+|||+.+.++|.|+.... +.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 3579999999999999999999998 899999999988877654221 112223556
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCC-CCCCCCCCCCCcccEeecCCC-
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVP-VLPKIPGISEFRGRLLHTSTY- 164 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~-~~p~~~g~~~~~~~~~~~~~~- 164 (395)
..++..++++.+++++.++.|. .. |++++..+.||+||+||| +.+ +.|++||.+. .+ +++...+
T Consensus 62 ~~~~~~~~~~~gv~~~~~~~v~--------~~--V~~~~~~~~~d~lVlAtG--s~~~~~~~ipG~~~-~g-v~~~~~~~ 127 (460)
T 1cjc_A 62 INTFTQTARSDRCAFYGNVEVG--------RD--VTVQELQDAYHAVVLSYG--AEDHQALDIPGEEL-PG-VFSARAFV 127 (460)
T ss_dssp HHHHHHHHTSTTEEEEBSCCBT--------TT--BCHHHHHHHSSEEEECCC--CCEECCCCCTTTTS-TT-EEEHHHHH
T ss_pred HHHHHHHHHhCCcEEEeeeEEe--------eE--EEeccceEEcCEEEEecC--cCCCCCCCCCCCCC-Cc-EEEHHHHH
Confidence 7778888888898888886661 11 444444468999999999 454 6788998752 22 2332221
Q ss_pred ---------CCCc-CCCCCeEEEECCCcCHHHHHHHHh--------------------hCCC-eEEEEEecCceeeeccc
Q 039923 165 ---------KNGV-EFRASKVLVVGCGNSGMEISFDLC--------------------KNGA-QVSLVVRDKVHILPKKI 213 (395)
Q Consensus 165 ---------~~~~-~~~~~~v~VvG~G~~a~e~a~~l~--------------------~~g~-~V~~~~r~~~~~~p~~~ 213 (395)
.... ...+++++|||+|.+|+|+|..|+ ..+. +|+++.|++ .+.....
T Consensus 128 ~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~-~~~~~ft 206 (460)
T 1cjc_A 128 GWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG-PLQVAFT 206 (460)
T ss_dssp HHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC-GGGCCCC
T ss_pred HHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC-hHhhccC
Confidence 1111 235899999999999999999998 4566 799999988 2210000
Q ss_pred cCCChhHHHHHHHhhCCh--------hH---------HHHHHHHhhhhhccchhh----cCCCCCCCCCCcccCCCCCCc
Q 039923 214 LGRSSFAISVWLLKWFPV--------DV---------VDRFLLFCSRLVLGDTKQ----IGIQRPKMGPLQWKNSVGKTP 272 (395)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~--------~~---------~~~~~~~~~~~~~~~~~~----~gi~~~~~~~~~~~~~~~~~~ 272 (395)
...+.. + ..+|. .+ ...........+.....+ ++..
T Consensus 207 ----~~el~~-l-~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----------------- 263 (460)
T 1cjc_A 207 ----IKELRE-M-IQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAA----------------- 263 (460)
T ss_dssp ----HHHHHH-H-HTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHH-----------------
T ss_pred ----HHHHHH-h-hcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhcccccccc-----------------
Confidence 001111 0 00110 00 000000000000000000 0000
Q ss_pred ccChhhHhhhhcCCeEEecC--ccEEecC-------eEEEe---------------CC--cEecCcEEEEcCCCCCCCCc
Q 039923 273 VLDDGAFAKIKSGEIKVVPG--IQKFTAK-------GAEFV---------------NR--TVKEFDSIILATGYRSNVSS 326 (395)
Q Consensus 273 ~~~~~~~~~~~~~~v~~~~~--v~~~~~~-------~v~~~---------------~g--~~i~~D~vi~atG~~~~~~~ 326 (395)
.......+|.++.. +.++.+. ++.+. +| +++++|.||+++|++|+.
T Consensus 264 ------~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-- 335 (460)
T 1cjc_A 264 ------RRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-- 335 (460)
T ss_dssp ------HHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC--
T ss_pred ------CCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC--
Confidence 00000134555544 4444332 13332 34 579999999999999986
Q ss_pred ccccccc-ccccCCCCCCCCCCCCCCC-CCCeEEEEecccccc----cchhhHHHHHHHHHhhhcc
Q 039923 327 WLKEASL-FNQKNNNNPQDSYPKNWKG-KNGVYSVGFARQGLL----GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 327 ~~~~~~l-~~~~~~g~~~~~~~~~~~~-~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~ 386 (395)
+ .++ + +|++|.+++| ..++++ .|+|||+|||+.++. .|+.+|+.+|.+|...+.+
T Consensus 336 l---~gl~~-~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 336 I---DPSVP-FDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp C---CTTSC-CBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCCcc-cccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 2 467 7 7888888888 677877 799999999997654 6999999999999998865
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=3.2e-31 Score=263.77 Aligned_cols=270 Identities=18% Similarity=0.146 Sum_probs=198.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..+||+|||||++|+++|..|+++|++|+|||+.+.+||.+.... ..+......++.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHH
Confidence 458999999999999999999999999999999999988654210 0122233467888
Q ss_pred HHHHHHHHc-CCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC------CCCCCCCCCCCCcccEee
Q 039923 89 YMEAYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV------PVLPKIPGISEFRGRLLH 160 (395)
Q Consensus 89 ~~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~------~~~p~~~g~~~~~~~~~~ 160 (395)
++...+.++ +++++.+++|+ .++ .++.||+||+|||.... +..|.+||.+. ..+++
T Consensus 448 ~~~~~~~~~~gv~~~~~~~v~--------------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~--~~v~~ 511 (690)
T 3k30_A 448 YREAVLAELPNVEIYRESPMT--------------GDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEG--MQVLG 511 (690)
T ss_dssp HHHHHHHTCTTEEEESSCCCC--------------HHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTT--SEEEC
T ss_pred HHHHHHHHcCCCEEEECCeec--------------HHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCC--CcEEc
Confidence 888888887 78877775432 122 45779999999995322 55678888764 34455
Q ss_pred cCCCCCCcCCCCCeEEEEC--CCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHH
Q 039923 161 TSTYKNGVEFRASKVLVVG--CGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFL 238 (395)
Q Consensus 161 ~~~~~~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (395)
...+.+.....+++|+||| +|.+|+|+|..|.+.|++|+++++.+ .+++....
T Consensus 512 ~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~------------------------ 566 (690)
T 3k30_A 512 PDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNN------------------------ 566 (690)
T ss_dssp HHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGG------------------------
T ss_pred HHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-cccccccc------------------------
Confidence 5444444555788999999 99999999999999999999999987 44333211
Q ss_pred HHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEe-----CCcEecC
Q 039923 239 LFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFV-----NRTVKEF 311 (395)
Q Consensus 239 ~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~-----~g~~i~~ 311 (395)
+.....+.+.+++.+|+++.+ |.+++.+++.+. +++++++
T Consensus 567 ---------------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~a 613 (690)
T 3k30_A 567 ---------------------------------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELEC 613 (690)
T ss_dssp ---------------------------------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred ---------------------------------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEEC
Confidence 001112344455556777766 788887775554 4568999
Q ss_pred cEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc--cchhhHHHHHHHHHhhhcccc
Q 039923 312 DSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL--GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 312 D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~--~a~~~g~~~a~~i~~~~~~~~ 388 (395)
|.||+|+|++|+. .+..+++.. .+ +++.|+||++|||+.... .|+.||+.+|.+|.+.+.++.
T Consensus 614 D~VV~A~G~~p~~-~l~~~l~~~-~~------------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~g~~ 678 (690)
T 3k30_A 614 DAVVMVTARLPRE-ELYLDLVAR-RD------------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSND 678 (690)
T ss_dssp SEEEEESCEEECC-HHHHHHHHH-HH------------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred CEEEECCCCCCCh-HHHHHHhhh-hc------------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhccCCC
Confidence 9999999999997 555554332 11 667899999999998766 899999999999999976553
No 85
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.96 E-value=4.9e-31 Score=252.59 Aligned_cols=301 Identities=17% Similarity=0.188 Sum_probs=190.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCceeeec--CC--ccccCCCCCCCC------CC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQLHL--PK--QFCQLPYVPFPR------EY 77 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~------~~ 77 (395)
.+||+|||||++|+++|..|.+. |.+|+|||+++.++- .........+.. +. ....+..++... ..
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 47899999999999999999988 789999999976541 000000000000 00 000000000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCC--C
Q 039923 78 PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISE--F 154 (395)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~--~ 154 (395)
..+.....+.+ ..+.+++++.+++|+.++... .. |++++ .++.||+||+||| ++|+.|++++... +
T Consensus 89 ~~~~~~~~l~~-----~~~~gv~~~~g~~v~~id~~~--~~--V~~~~g~~i~yd~lviATG--s~p~~~~~~~~~~~~~ 157 (493)
T 1m6i_A 89 SFYVSAQDLPH-----IENGGVAVLTGKKVVQLDVRD--NM--VKLNDGSQITYEKCLIATG--GTPRSLSAIDRAGAEV 157 (493)
T ss_dssp GGSBCTTTTTT-----STTCEEEEEETCCEEEEEGGG--TE--EEETTSCEEEEEEEEECCC--EEECCCHHHHTSCHHH
T ss_pred Hhhcchhhhhh-----hhcCCeEEEcCCEEEEEECCC--CE--EEECCCCEEECCEEEECCC--CCCCCCCCcccccccc
Confidence 00011011100 124578888899999998765 43 66665 7899999999999 6777665544211 1
Q ss_pred cccEeecCCCCCC-----cCCCCCeEEEECCCcCHHHHHHHHhh----CCCeEEEEEecCceeeeccccCCChhHHHHHH
Q 039923 155 RGRLLHTSTYKNG-----VEFRASKVLVVGCGNSGMEISFDLCK----NGAQVSLVVRDKVHILPKKILGRSSFAISVWL 225 (395)
Q Consensus 155 ~~~~~~~~~~~~~-----~~~~~~~v~VvG~G~~a~e~a~~l~~----~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 225 (395)
...+.......+. ....+++++|||+|.+|+|+|..|.+ .|.+|+++.+.+ .++++..
T Consensus 158 ~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~-~~~~~~l------------ 224 (493)
T 1m6i_A 158 KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK-GNMGKIL------------ 224 (493)
T ss_dssp HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS-STTTTTS------------
T ss_pred cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc-ccccccC------------
Confidence 1112222111111 11248999999999999999999876 478899998775 2222111
Q ss_pred HhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--C--
Q 039923 226 LKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--K-- 299 (395)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~-- 299 (395)
+.. ....+.+.+++.+|+++.+ |.++.. .
T Consensus 225 ----~~~-----------------------------------------~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~ 259 (493)
T 1m6i_A 225 ----PEY-----------------------------------------LSNWTMEKVRREGVKVMPNAIVQSVGVSSGKL 259 (493)
T ss_dssp ----CHH-----------------------------------------HHHHHHHHHHTTTCEEECSCCEEEEEEETTEE
T ss_pred ----CHH-----------------------------------------HHHHHHHHHHhcCCEEEeCCEEEEEEecCCeE
Confidence 100 0111233344456666655 666653 2
Q ss_pred eEEEeCCcEecCcEEEEcCCCCCCCCccccccccccccC-CCCCCCCCCCCCCCCCCeEEEEeccccc----------c-
Q 039923 300 GAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKN-NNNPQDSYPKNWKGKNGVYSVGFARQGL----------L- 367 (395)
Q Consensus 300 ~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~~~iya~Gd~~~~~----------~- 367 (395)
.+.+.+|+++++|.||+|+|.+|+. .+++..++. +++ +|.+.+| .++++ .|+|||+|||+..+ .
T Consensus 260 ~v~l~dG~~i~aD~Vv~a~G~~pn~-~l~~~~gl~-~~~~~ggi~Vd-~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~ 335 (493)
T 1m6i_A 260 LIKLKDGRKVETDHIVAAVGLEPNV-ELAKTGGLE-IDSDFGGFRVN-AELQA-RSNIWVAGDAACFYDIKLGRRRVEHH 335 (493)
T ss_dssp EEEETTSCEEEESEEEECCCEEECC-TTHHHHTCC-BCTTTCSEECC-TTCEE-ETTEEECGGGEEEEETTTEEECCCCH
T ss_pred EEEECCCCEEECCEEEECCCCCccH-HHHHHcCCc-cccCCCcEEEC-CCccc-CCCeeEeeeeEeccCcccCccccchH
Confidence 3777899999999999999999997 577777888 665 5788888 56777 69999999998642 1
Q ss_pred -cchhhHHHHHHHHHhhhc
Q 039923 368 -GISMDAHKVADDIASQWN 385 (395)
Q Consensus 368 -~a~~~g~~~a~~i~~~~~ 385 (395)
.|..||+.+|.+|.+...
T Consensus 336 ~~A~~qg~~aa~ni~g~~~ 354 (493)
T 1m6i_A 336 DHAVVSGRLAGENMTGAAK 354 (493)
T ss_dssp HHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHhcCCCC
Confidence 699999999999987643
No 86
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=5.7e-30 Score=264.07 Aligned_cols=277 Identities=16% Similarity=0.156 Sum_probs=188.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
.+||+||||||+|+++|.+|++.|+ +|+|||+.+.+||++... .+.+ ....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~~---------~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQF---------RLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCTT---------TSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCcc---------cCCHHHHH
Confidence 5799999999999999999999999 799999998898875321 1111 11234666
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCC-CCCCCCcccEeecCCC--
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKI-PGISEFRGRLLHTSTY-- 164 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~-~g~~~~~~~~~~~~~~-- 164 (395)
+..+++++.+++++.++.+.. .. +++++ ..+.||+||+|||++ .|+.+++ +|++...+ +++..++
T Consensus 243 ~~~~~~~~~gv~~~~~~~v~~-------~~--v~~~~~~~~~~d~vvlAtGa~-~p~~l~~~~G~~~~~g-v~~a~~~L~ 311 (1025)
T 1gte_A 243 FEIELMKDLGVKIICGKSLSE-------NE--ITLNTLKEEGYKAAFIGIGLP-EPKTDDIFQGLTQDQG-FYTSKDFLP 311 (1025)
T ss_dssp HHHHHHHTTTCEEEESCCBST-------TS--BCHHHHHHTTCCEEEECCCCC-EECCCGGGTTCCTTTT-EEEHHHHHH
T ss_pred HHHHHHHHCCcEEEcccEecc-------ce--EEhhhcCccCCCEEEEecCCC-CCCCCCCCCCCCCCCC-EEEhHHHHH
Confidence 667778888999888876621 11 33333 457899999999941 4655443 45542222 2221111
Q ss_pred ------------CC-CcCCCCCeEEEECCCcCHHHHHHHHhhCCC-eEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 165 ------------KN-GVEFRASKVLVVGCGNSGMEISFDLCKNGA-QVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 165 ------------~~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
.+ .....+++|+|||||.+|+|+|..+.+.|. +||++.|++...+|.... ..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~-----e~--------- 377 (1025)
T 1gte_A 312 LVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE-----EV--------- 377 (1025)
T ss_dssp HHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH-----HH---------
T ss_pred HHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH-----HH---------
Confidence 11 112246799999999999999999999996 899999987333332211 00
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEe-----------
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFT----------- 297 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~----------- 297 (395)
..+++.|+ ++... +.++.
T Consensus 378 ----------------~~~~~~Gv---------------------------------~~~~~~~~~~i~~~~g~v~~v~~ 408 (1025)
T 1gte_A 378 ----------------ELAKEEKC---------------------------------EFLPFLSPRKVIVKGGRIVAVQF 408 (1025)
T ss_dssp ----------------HHHHHTTC---------------------------------EEECSEEEEEEEEETTEEEEEEE
T ss_pred ----------------HHHHHcCC---------------------------------EEEeCCCceEEEccCCeEEEEEE
Confidence 01122233 22211 11111
Q ss_pred ------cCe--EEEeC-CcEecCcEEEEcCCCCCCCCcccccc-ccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc
Q 039923 298 ------AKG--AEFVN-RTVKEFDSIILATGYRSNVSSWLKEA-SLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL 367 (395)
Q Consensus 298 ------~~~--v~~~~-g~~i~~D~vi~atG~~~~~~~~~~~~-~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~ 367 (395)
+++ +...+ ..++++|.||+|+|++|+...++.+. ++. +|++|++.+|+.+++|+.|+|||+|||+.++.
T Consensus 409 ~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~-~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~ 487 (1025)
T 1gte_A 409 VRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIK-FNRWDLPEVDPETMQTSEPWVFAGGDIVGMAN 487 (1025)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSC-BCTTSSBCCCTTTCBCSSTTEEECSGGGCSCC
T ss_pred EEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCce-ECCCCCEEECCCCCccCCCCEEEeCCCCCCch
Confidence 111 11111 13789999999999987654666664 888 78899999995578899999999999998665
Q ss_pred ---cchhhHHHHHHHHHhhhc
Q 039923 368 ---GISMDAHKVADDIASQWN 385 (395)
Q Consensus 368 ---~a~~~g~~~a~~i~~~~~ 385 (395)
.|+.||+.+|++|.++|.
T Consensus 488 ~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 488 TTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999998876
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=5.2e-30 Score=256.01 Aligned_cols=275 Identities=19% Similarity=0.211 Sum_probs=186.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.+..... . +....-..+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~-------------~---------pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA-------------L---------PGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT-------------S---------TTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc-------------C---------CChHHHHHHHH
Confidence 4589999999999999999999999999999999999987653110 0 11112234555
Q ss_pred HHHHHHHHc------CCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC------CCCCCCCCCCCCc
Q 039923 89 YMEAYANHF------EIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV------PVLPKIPGISEFR 155 (395)
Q Consensus 89 ~~~~~~~~~------~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~------~~~p~~~g~~~~~ 155 (395)
+++..++.. ++++..++ . +++++ ..+.||+||+|||.... |..|++||.+.+.
T Consensus 446 ~~~~~i~~~~~~~~~~v~i~~~~------------~--v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~ 511 (729)
T 1o94_A 446 YRETQITKLLKKNKESQLALGQK------------P--MTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASL 511 (729)
T ss_dssp HHHHHHHHHHHHSTTCEEECSCC------------C--CCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTS
T ss_pred HHHHHHHHhhcccCCceEEEeCe------------E--EehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccC
Confidence 555555443 22222221 1 33333 46789999999995322 5677888877444
Q ss_pred ccEeecCCCCCCcCCCCCeEEEEC--CCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhH
Q 039923 156 GRLLHTSTYKNGVEFRASKVLVVG--CGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDV 233 (395)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (395)
..+++...+.+.....+++|+||| +|.+|+|+|..|++.|++||++++++ +++.....
T Consensus 512 ~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~------------------ 571 (729)
T 1o94_A 512 PDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFT------------------ 571 (729)
T ss_dssp TTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHT------------------
T ss_pred CCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--cccccccc------------------
Confidence 445555444444445688999999 99999999999999999999999876 32211000
Q ss_pred HHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEEe----CC-
Q 039923 234 VDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEFV----NR- 306 (395)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~----~g- 306 (395)
.....+.+.+++.+|+++.+ +.++++.++.+. ++
T Consensus 572 ---------------------------------------~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~ 612 (729)
T 1o94_A 572 ---------------------------------------LEYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGS 612 (729)
T ss_dssp ---------------------------------------TCHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCS
T ss_pred ---------------------------------------ccHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCce
Confidence 00011233344456666655 667766654432 22
Q ss_pred cE------------------ecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc-
Q 039923 307 TV------------------KEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL- 367 (395)
Q Consensus 307 ~~------------------i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~- 367 (395)
+. +++|.||+|+|++|+. .++++++.. +| .+++|+.|+||++|||+....
T Consensus 613 ~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~-~l~~~l~~~---------vd-~~~~t~~~~VyAiGD~~~~~~~ 681 (729)
T 1o94_A 613 KRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC-TLWNELKAR---------ES-EWAENDIKGIYLIGDAEAPRLI 681 (729)
T ss_dssp CCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC-HHHHHHHHT---------GG-GTGGGTCCEEEECGGGTSCCCH
T ss_pred EEecccccccccccCCcceeeeCCEEEECCCCCCCh-HHHHHHhhh---------cc-cccccCCCCeEEEeCccchhhH
Confidence 22 8999999999999997 455443211 23 467788999999999987544
Q ss_pred -cchhhHHHHHHHHHhhhccccc
Q 039923 368 -GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 368 -~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
.|+.||+.+|.+|.+.+.....
T Consensus 682 ~~A~~~G~~aA~~i~~~l~~~~~ 704 (729)
T 1o94_A 682 ADATFTGHRVAREIEEANPQIAI 704 (729)
T ss_dssp HHHHHHHHHHHHTTTSSCTTSCC
T ss_pred HHHHHHHHHHHHHhhhhcccCCC
Confidence 8999999999999988765544
No 88
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=1.9e-30 Score=244.94 Aligned_cols=286 Identities=14% Similarity=0.149 Sum_probs=187.6
Q ss_pred CCCeEEECCChHHHHHHHHHHH--cCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE--RGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~--~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
++||+|||||++|+++|..|++ .|++|+|||+++..+..... +.. . ......+++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~---~~~----------~---------~g~~~~~~~~ 59 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF---PHL----------A---------MGWRKFEDIS 59 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH---HHH----------H---------HTCSCGGGSE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc---chh----------c---------cCccCHHHHH
Confidence 5799999999999999999999 78999999999865431100 000 0 0001111222
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
..+...+++.+++++. .+|+.++... . .+++++ .++.||+||+||| +.+..| |+.. .+.........+
T Consensus 60 ~~~~~~~~~~gv~~~~-~~v~~id~~~--~--~v~~~~g~~i~~d~liiAtG--~~~~~p---g~~~-~g~~~~~~~~~~ 128 (430)
T 3h28_A 60 VPLAPLLPKFNIEFIN-EKAESIDPDA--N--TVTTQSGKKIEYDYLVIATG--PKLVFG---AEGQ-EENSTSICTAEH 128 (430)
T ss_dssp EESTTTGGGGTEEEEC-SCEEEEETTT--T--EEEETTCCEEECSEEEECCC--CEEECC---SBTH-HHHSCCCSSHHH
T ss_pred HHHHHHHHhcCCEEEE-EEEEEEECCC--C--EEEECCCcEEECCEEEEcCC--cccccC---CCCC-cCCccCcCCHHH
Confidence 2223345556888775 4888888765 4 366666 6799999999999 555554 3321 111111111111
Q ss_pred CcC--------CCCCeEEEECCCcCH------HHHHHH----HhhCC----CeEEEEEecCceeeeccccCCChhHHHHH
Q 039923 167 GVE--------FRASKVLVVGCGNSG------MEISFD----LCKNG----AQVSLVVRDKVHILPKKILGRSSFAISVW 224 (395)
Q Consensus 167 ~~~--------~~~~~v~VvG~G~~a------~e~a~~----l~~~g----~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 224 (395)
... ..+++++|||+|.+| +|+|.. +.+.| .+|+++.+.+ .+.+....+.
T Consensus 129 a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~-~~~~~~l~~~-------- 199 (430)
T 3h28_A 129 ALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVGGI-------- 199 (430)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTTCS--------
T ss_pred HHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc-cccccccCcc--------
Confidence 110 014567888987654 887744 44556 4788888776 2211100000
Q ss_pred HHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEE
Q 039923 225 LLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAE 302 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~ 302 (395)
+.....+.+.+++.+|+++.+ |++++++++.
T Consensus 200 -----------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~ 232 (430)
T 3h28_A 200 -----------------------------------------------GASKRLVEDLFAERNIDWIANVAVKAIEPDKVI 232 (430)
T ss_dssp -----------------------------------------------TTHHHHHHHHHHHTTCEEECSCEEEEECSSEEE
T ss_pred -----------------------------------------------hHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEE
Confidence 011122344555667777765 8888888888
Q ss_pred EeC----CcEecCcEEEEcCCCCCCCCccccc--cccccccCCC-CCCCCCCCCCC-CCCCeEEEEeccccc--------
Q 039923 303 FVN----RTVKEFDSIILATGYRSNVSSWLKE--ASLFNQKNNN-NPQDSYPKNWK-GKNGVYSVGFARQGL-------- 366 (395)
Q Consensus 303 ~~~----g~~i~~D~vi~atG~~~~~~~~~~~--~~l~~~~~~g-~~~~~~~~~~~-~~~~iya~Gd~~~~~-------- 366 (395)
+++ ++++++|.+++++|++++. ++.+ .++ .+++| ++.+| +++++ ++|||||+|||+..+
T Consensus 233 ~~~~~~~g~~i~~D~vv~a~G~~~~~--~l~~~~~gl--~~~~G~~i~Vd-~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~ 307 (430)
T 3h28_A 233 YEDLNGNTHEVPAKFTMFMPSFQGPE--VVASAGDKV--ANPANKMVIVN-RCFQNPTYKNIFGVGVVTAIPPIEKTPIP 307 (430)
T ss_dssp EECTTSCEEEEECSEEEEECEEECCH--HHHTTCTTT--BCTTTCCBCCC-TTSBCSSSTTEEECSTTBCCCCSSCCSSC
T ss_pred EEecCCCceEEeeeEEEECCCCccch--hHhhccccC--cCCCCCEEecC-ccccCCCCCCEEEEEeeeccCCccCCCCC
Confidence 887 7899999999999999873 3444 355 56889 99999 57776 899999999998642
Q ss_pred ----c---cchhhHHHHHHHHHhhhccccc
Q 039923 367 ----L---GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 367 ----~---~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
. .|..||+.+|+||.+.+.+++.
T Consensus 308 ~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~ 337 (430)
T 3h28_A 308 TGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 1 8999999999999999987654
No 89
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=1.1e-28 Score=231.16 Aligned_cols=288 Identities=17% Similarity=0.099 Sum_probs=179.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.++|||||||++|+++|.+|++.+ .+|+|||+++.... ..+ ..... .+....+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~-------~p~------~~~v~---------~g~~~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT-------CYM------SNEVI---------GGDRELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC-------STT------HHHHH---------HTSSCGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC-------ccC------HHHHh---------cCCCCHHHHh
Confidence 478999999999999999999876 58999999863211 000 00000 0000001111
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCccc-EeecCCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGR-LLHTSTYK 165 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~-~~~~~~~~ 165 (395)
..++. +.+.+++++. .+|+.++... +. +++.+ .++.||+||+||| +++.++.+||.++.... ..+.....
T Consensus 60 ~~~~~-~~~~gv~~i~-~~v~~id~~~--~~--v~~~~g~~i~yd~LviAtG--~~~~~~~i~G~~e~~~~~~~~~~~~~ 131 (401)
T 3vrd_B 60 VGYDG-LRAHGIQVVH-DSALGIDPDK--KL--VKTAGGAEFAYDRCVVAPG--IDLLYDKIEGYSEALAAKLPHAWKAG 131 (401)
T ss_dssp ECSHH-HHHTTCEEEC-SCEEEEETTT--TE--EEETTSCEEECSEEEECCC--EEECGGGSBTCCSGGGGTSCCCSSCS
T ss_pred hCHHH-HHHCCCEEEE-eEEEEEEccC--cE--EEecccceeecceeeeccC--CccccCCccCchhhcccCccceeccH
Confidence 11112 2345888754 4788998766 43 66666 8999999999999 78888899997754321 11221111
Q ss_pred CC--------cCCCCCeEEEECCCc-----------CHHHHHHHHhhCC--CeEEEEEecCceeeeccccCCChhHHHHH
Q 039923 166 NG--------VEFRASKVLVVGCGN-----------SGMEISFDLCKNG--AQVSLVVRDKVHILPKKILGRSSFAISVW 224 (395)
Q Consensus 166 ~~--------~~~~~~~v~VvG~G~-----------~a~e~a~~l~~~g--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 224 (395)
+. ........+|+++|. .+.+++..+...+ .+|+++.+.+ .+.+.. .+...
T Consensus 132 ~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~-~~~~~~-------~~~~~ 203 (401)
T 3vrd_B 132 EQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQ-TFSKQA-------QFTKG 203 (401)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSS-SCTTHH-------HHHHH
T ss_pred HHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccc-cccccc-------cccHH
Confidence 10 011233444444332 2345555555444 5788887766 221110 00111
Q ss_pred HHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec----
Q 039923 225 LLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA---- 298 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~---- 298 (395)
+ ...+ ...++...++++.+ +..++.
T Consensus 204 ~----------------~~~~---------------------------------~~~l~~~gi~v~~~~~v~~v~~~~~~ 234 (401)
T 3vrd_B 204 W----------------ERLY---------------------------------GFGTENALIEWHPGPDAAVVKTDTEA 234 (401)
T ss_dssp H----------------HHHS---------------------------------CTTSTTCSEEEECTTTTCEEEEETTT
T ss_pred H----------------HHHH---------------------------------HHHHHhcCcEEEeCceEEEEEecccc
Confidence 1 1111 11223345555544 444432
Q ss_pred CeEEEeCCcEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCC-CCCCCeEEEEeccccc---c---cchh
Q 039923 299 KGAEFVNRTVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNW-KGKNGVYSVGFARQGL---L---GISM 371 (395)
Q Consensus 299 ~~v~~~~g~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~-~~~~~iya~Gd~~~~~---~---~a~~ 371 (395)
..+.+.+|+++++|.+++++|.+|+ .++++.++ .+++|++.+|+.+++ +++|||||+|||+... . .|..
T Consensus 235 ~~v~~~~g~~i~~D~vi~~~g~~~~--~~~~~~gl--~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~ 310 (401)
T 3vrd_B 235 MTVETSFGETFKAAVINLIPPQRAG--KIAQSASL--TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANS 310 (401)
T ss_dssp TEEEETTSCEEECSEEEECCCEEEC--HHHHHTTC--CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHH
T ss_pred eEEEcCCCcEEEeeEEEEecCcCCc--hhHhhccc--cccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHH
Confidence 2488899999999999999999986 56777787 469999999955454 7899999999997542 1 7899
Q ss_pred hHHHHHHHHHhhhcccc
Q 039923 372 DAHKVADDIASQWNSET 388 (395)
Q Consensus 372 ~g~~~a~~i~~~~~~~~ 388 (395)
||+.+|+||.+.+.+++
T Consensus 311 qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 311 QAKVAAAAVVALLKGEE 327 (401)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999998764
No 90
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=7.7e-28 Score=246.57 Aligned_cols=275 Identities=15% Similarity=0.138 Sum_probs=188.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.+... +...+ .. ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~--~k~~i------------------~~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDT--AGEQI------------------DG-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGS--SCCEE------------------TT-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccC--Ccccc------------------CC-CCHHHHHHH
Confidence 4789999999999999999999999999999999999876521 10000 00 113455555
Q ss_pred HHHHHHHc-CCccccCceEEEEEEcCC-------CCcEEEEE------cc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCC
Q 039923 90 MEAYANHF-EIEPLLGQEVQWAKYDAA-------MGHWRVKT------HE-YEFMCRWLIVATGENEVPVLPKIPGISEF 154 (395)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~V~~v~~~~~-------~~~~~v~~------~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~ 154 (395)
+...+.++ +++++.+++|..+..... .+.+.+.+ .+ .++.||+|||||| +.++.|++||.+..
T Consensus 187 ~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATG--s~p~~~~ipG~~~~ 264 (965)
T 2gag_A 187 VTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATG--AHERPIVFENNDRP 264 (965)
T ss_dssp HHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCC--EEECCCCCBTCCST
T ss_pred HHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCC--CccCCCCCCCCCCC
Confidence 55555564 888888888887763220 01111221 11 4799999999999 67888888887642
Q ss_pred cccEeecCC---CCC-CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCC
Q 039923 155 RGRLLHTST---YKN-GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFP 230 (395)
Q Consensus 155 ~~~~~~~~~---~~~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 230 (395)
+ +.+... +.. .....+++++|||+|.+|+|+|..|.+.|.+|+++++++ .+++.
T Consensus 265 -g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~-~~~~~------------------- 322 (965)
T 2gag_A 265 -G-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS-SISAA------------------- 322 (965)
T ss_dssp -T-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS-SCCHH-------------------
T ss_pred -C-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC-ccchh-------------------
Confidence 2 233211 111 112356899999999999999999999999999999987 33110
Q ss_pred hhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEec--C----eEE
Q 039923 231 VDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTA--K----GAE 302 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~----~v~ 302 (395)
.+.+++.+|.++.+ +.++.. . ++.
T Consensus 323 ------------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~ 354 (965)
T 2gag_A 323 ------------------------------------------------AAQAVADGVQVISGSVVVDTEADENGELSAIV 354 (965)
T ss_dssp ------------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEE
T ss_pred ------------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEE
Confidence 11122234444443 555554 2 455
Q ss_pred EeC-------C--cEecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCC-----CCCCCeEEEEecccccc-
Q 039923 303 FVN-------R--TVKEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNW-----KGKNGVYSVGFARQGLL- 367 (395)
Q Consensus 303 ~~~-------g--~~i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~-----~~~~~iya~Gd~~~~~~- 367 (395)
+.+ | +++++|.|++++|++|+. .++.. ..|.+.+| ..++ ++.|+||++|||+....
T Consensus 355 ~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~-~l~~~-------~~g~i~vd-~~~~~~v~~ts~p~IyAaGD~a~~~~l 425 (965)
T 2gag_A 355 VAELDEARELGGTQRFEADVLAVAGGFNPVV-HLHSQ-------RQGKLDWD-TTIHAFVPADAVANQHLAGAMTGRLDT 425 (965)
T ss_dssp EEEECTTCCEEEEEEEECSEEEEECCEEECC-HHHHH-------TTCCEEEE-TTTTEEEECSCCTTEEECGGGGTCCSH
T ss_pred EEeccccCCCCceEEEEcCEEEECCCcCcCh-HHHHh-------CCCcEEEc-CcccccccCCCCCCEEEEEecCCchhH
Confidence 654 4 579999999999999997 44332 23445555 3333 78999999999997765
Q ss_pred -cchhhHHHHHHHHHhhhcc
Q 039923 368 -GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 368 -~a~~~g~~~a~~i~~~~~~ 386 (395)
.|..||+.+|.+|.+.+..
T Consensus 426 ~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 426 ASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 8999999999999988753
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.95 E-value=1.4e-29 Score=238.68 Aligned_cols=288 Identities=15% Similarity=0.160 Sum_probs=176.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.++|||||||++|+++|.+|++.+ ++|+|||++++.. |..+...... +....+++.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~---------------g~~~~~~i~ 59 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM---------------GWRKFEDIS 59 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH---------------TCSCGGGSE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc---------------CCCCHHHhh
Confidence 468999999999999999999876 7899999987432 1000000000 000111111
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKN 166 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 166 (395)
..++..+++.+++++.+ +|+.++.+. +. |++++ +++.||+||+||| +++. +++||.++.. .......+
T Consensus 60 ~~~~~~~~~~gv~~i~~-~v~~Id~~~--~~--V~~~~g~~i~YD~LViAtG--~~~~-~~i~G~~e~~---~~~~~~~~ 128 (430)
T 3hyw_A 60 VPLAPLLPKFNIEFINE-KAESIDPDA--NT--VTTQSGKKIEYDYLVIATG--PKLV-FGAEGQEENS---TSICTAEH 128 (430)
T ss_dssp EESTTTGGGGTEEEECS-CEEEEETTT--TE--EEETTCCEEECSEEEECCC--CEEE-CCSBTHHHHS---CCCSSHHH
T ss_pred hcHHHHHHHCCcEEEEe-EEEEEECCC--CE--EEECCCCEEECCEEEEeCC--CCcc-CCccCcccCc---CCcccHHH
Confidence 11223445568887644 799998876 44 77776 7999999999999 4443 4577765321 11111111
Q ss_pred Cc--------CCCCCeEEEECCCc------CHHHHHH----HHhhCC----CeEEEEEecCceeeeccccCCChhHHHHH
Q 039923 167 GV--------EFRASKVLVVGCGN------SGMEISF----DLCKNG----AQVSLVVRDKVHILPKKILGRSSFAISVW 224 (395)
Q Consensus 167 ~~--------~~~~~~v~VvG~G~------~a~e~a~----~l~~~g----~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 224 (395)
.. ....+.++|+|++. .+.|++. .+.+.+ .+|+++...+ .+.+.....
T Consensus 129 a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~-~l~~~~~~~--------- 198 (430)
T 3hyw_A 129 ALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVGG--------- 198 (430)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTTC---------
T ss_pred HHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc-hhhhccchh---------
Confidence 10 01244456666542 2234433 334444 3577766554 221111000
Q ss_pred HHhhCChhHHHHHHHHhhhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEE
Q 039923 225 LLKWFPVDVVDRFLLFCSRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAE 302 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~ 302 (395)
.+.....+.+.+++.+|+++.+ |++++++++.
T Consensus 199 ----------------------------------------------~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~ 232 (430)
T 3hyw_A 199 ----------------------------------------------IGASKRLVEDLFAERNIDWIANVAVKAIEPDKVI 232 (430)
T ss_dssp ----------------------------------------------STTHHHHHHHHHHHTTCEEECSCEEEEECSSEEE
T ss_pred ----------------------------------------------hHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceE
Confidence 0001111233445557777766 8889888887
Q ss_pred EeC----CcEecCcEEEEcCCCCCCCCccccccc--cccccCCCCCCCCCCCCC-CCCCCeEEEEeccccc---------
Q 039923 303 FVN----RTVKEFDSIILATGYRSNVSSWLKEAS--LFNQKNNNNPQDSYPKNW-KGKNGVYSVGFARQGL--------- 366 (395)
Q Consensus 303 ~~~----g~~i~~D~vi~atG~~~~~~~~~~~~~--l~~~~~~g~~~~~~~~~~-~~~~~iya~Gd~~~~~--------- 366 (395)
+.+ ++++++|.++|++|.+|+ .++...+ +. .+.+|++.+| ++++ +++|||||+|||+..+
T Consensus 233 ~~~~~g~~~~i~~d~vi~~~G~~~~--~~~~~~~~~l~-~~~~g~i~vd-~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~ 308 (430)
T 3hyw_A 233 YEDLNGNTHEVPAKFTMFMPSFQGP--EVVASAGDKVA-NPANKMVIVN-RCFQNPTYKNIFGVGVVTAIPPIEKTPIPT 308 (430)
T ss_dssp EECTTSCEEEEECSEEEEECEEECC--HHHHTTCTTTB-CTTTCCBCCC-TTSBCSSSTTEEECSTTBCCCCSSCCSSCC
T ss_pred EEeeCCCceEeecceEEEeccCCCc--hHHHhcccccc-cCCceEEEec-ccccCCCCCCEEEeccEEecCCcccCcCcC
Confidence 765 347999999999999997 3444443 43 3456778888 6776 8999999999998543
Q ss_pred ---c---cchhhHHHHHHHHHhhhcccccc
Q 039923 367 ---L---GISMDAHKVADDIASQWNSETRH 390 (395)
Q Consensus 367 ---~---~a~~~g~~~a~~i~~~~~~~~~~ 390 (395)
. .|..||+.+|+||.+.++++...
T Consensus 309 ~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~ 338 (430)
T 3hyw_A 309 GVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1 68899999999999999876543
No 92
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=5.4e-28 Score=240.00 Aligned_cols=276 Identities=20% Similarity=0.280 Sum_probs=181.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.+.... .+ +....-.++..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~-------------~~---------~~~~~~~~~~~ 429 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------------QI---------PGKEEFYETLR 429 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------------TS---------TTCTTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc-------------cC---------CCHHHHHHHHH
Confidence 358999999999999999999999999999999998888654210 00 11122345666
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEE-EeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEF-MCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~-~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
++...+++++++++.++.|.. . .+ .||+||+||| +.|..|++||.+. ..+++.......
T Consensus 430 ~~~~~~~~~gv~~~~~~~v~~-------~---------~~~~~d~lviAtG--~~p~~~~i~G~~~--~~v~~~~~~l~~ 489 (671)
T 1ps9_A 430 YYRRMIEVTGVTLKLNHTVTA-------D---------QLQAFDETILASG--IVPRTPPIDGIDH--PKVLSYLDVLRD 489 (671)
T ss_dssp HHHHHHHHHTCEEEESCCCCS-------S---------SSCCSSEEEECCC--EEECCCCCBTTTS--TTEEEHHHHHTS
T ss_pred HHHHHHHHcCCEEEeCcEecH-------H---------HhhcCCEEEEccC--CCcCCCCCCCCCC--CcEeeHHHHhhC
Confidence 777778888999888876532 0 13 7999999999 6888899998765 234554444444
Q ss_pred cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC--ceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhh
Q 039923 168 VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK--VHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLV 245 (395)
Q Consensus 168 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (395)
....+++|+|||+|.+|+|+|..|++.|.+|++....- .+-......
T Consensus 490 ~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~------------------------------- 538 (671)
T 1ps9_A 490 KAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ------------------------------- 538 (671)
T ss_dssp CCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC-------------------------------
T ss_pred CCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc-------------------------------
Confidence 44578999999999999999999999987766421000 000000000
Q ss_pred ccchhhcCCC--CCC--CCCCc--c-c----CC-CCCCcccChhhHhhhhcCCeEEecC--ccEEecCeEEE-eCC--cE
Q 039923 246 LGDTKQIGIQ--RPK--MGPLQ--W-K----NS-VGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAKGAEF-VNR--TV 308 (395)
Q Consensus 246 ~~~~~~~gi~--~~~--~~~~~--~-~----~~-~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~-~~g--~~ 308 (395)
.+..+. .+. ..... + . .. ....+.......+.+++.+|+++.+ +++++++++.+ .+| ++
T Consensus 539 ----~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~ 614 (671)
T 1ps9_A 539 ----QAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQV 614 (671)
T ss_dssp ----SGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEE
T ss_pred ----ccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEE
Confidence 000000 000 00000 0 0 00 0001112223456677778998877 78888888777 688 57
Q ss_pred ecCcEEEEcCCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHH
Q 039923 309 KEFDSIILATGYRSNVSSWLKEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDI 380 (395)
Q Consensus 309 i~~D~vi~atG~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i 380 (395)
+++|.||+|+|++|+. .+++.+ . . ..++||++|||+.... .|+.||+.+|.+|
T Consensus 615 i~~D~Vi~a~G~~p~~-~l~~~l--~---~-------------~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 615 LAVDNVVICAGQEPNR-ALAQPL--I---D-------------SGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ECCSEEEECCCEEECC-TTHHHH--H---T-------------TTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred EeCCEEEECCCccccH-HHHHHH--H---h-------------cCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 9999999999999987 444432 1 1 1258999999976542 7999999999875
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.3e-26 Score=221.97 Aligned_cols=253 Identities=16% Similarity=0.152 Sum_probs=175.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.+||+|||||++|+++|.+|++. ++|+|||+++.+||.+....+. .+. ++. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g---------~~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEG---------FNK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETT---------TTE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCC---------CCC--CHHHHHHH
Confidence 36999999999999999999999 9999999999988865432110 000 011 23444444
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE-c-c--EEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT-H-E--YEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYK 165 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~-~-~--~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~ 165 (395)
+.+.+ +.+++++++++|..++... ..+.+.. + + ..+.||+||+||| +.+..|++||.+.. + ++......
T Consensus 167 l~~~l-~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~~~~~~~~~d~lvlAtG--a~~~~~~~~g~~~~-g-v~~~~~~~ 239 (493)
T 1y56_A 167 LVGKL-NENTKIYLETSALGVFDKG--EYFLVPVVRGDKLIEILAKRVVLATG--AIDSTMLFENNDMP-G-VFRRDFAL 239 (493)
T ss_dssp HHHTC-CTTEEEETTEEECCCEECS--SSEEEEEEETTEEEEEEESCEEECCC--EEECCCCCTTTTST-T-EEEHHHHH
T ss_pred HHHHH-hcCCEEEcCCEEEEEEcCC--cEEEEEEecCCeEEEEECCEEEECCC--CCccCCCCCCCCCC-C-EEEcHHHH
Confidence 43333 4577888899998888766 5555543 2 2 3799999999999 67888888887532 2 22221110
Q ss_pred ---C-CcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHh
Q 039923 166 ---N-GVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFC 241 (395)
Q Consensus 166 ---~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (395)
. .....+++++|+|+|.+|+| ..+.+.|.++.. ...
T Consensus 240 ~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV~v~~--~~~------------------------------------ 279 (493)
T 1y56_A 240 EVMNVWEVAPGRKVAVTGSKADEVI--QELERWGIDYVH--IPN------------------------------------ 279 (493)
T ss_dssp HHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTCEEEE--CSS------------------------------------
T ss_pred HHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCcEEEe--CCe------------------------------------
Confidence 0 01235689999999999998 334444443321 111
Q ss_pred hhhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecCccEEec----CeEEEeCCcEecCcEEEEc
Q 039923 242 SRLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPGIQKFTA----KGAEFVNRTVKEFDSIILA 317 (395)
Q Consensus 242 ~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~----~~v~~~~g~~i~~D~vi~a 317 (395)
|.++.. ..+.+.+|+++++|.||+|
T Consensus 280 ---------------------------------------------------v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a 308 (493)
T 1y56_A 280 ---------------------------------------------------VKRVEGNEKVERVIDMNNHEYKVDALIFA 308 (493)
T ss_dssp ---------------------------------------------------EEEEECSSSCCEEEETTCCEEECSEEEEC
T ss_pred ---------------------------------------------------eEEEecCCceEEEEeCCCeEEEeCEEEEC
Confidence 112211 1255677889999999999
Q ss_pred CCCCCCCCcccccccccc-ccCCCCCC-CCCCCCCCCCCCeEEEEecccccc--cchhhHHHHHHHHHhhh
Q 039923 318 TGYRSNVSSWLKEASLFN-QKNNNNPQ-DSYPKNWKGKNGVYSVGFARQGLL--GISMDAHKVADDIASQW 384 (395)
Q Consensus 318 tG~~~~~~~~~~~~~l~~-~~~~g~~~-~~~~~~~~~~~~iya~Gd~~~~~~--~a~~~g~~~a~~i~~~~ 384 (395)
+|++|+. .+++..++.. .+++|++. +| .+++ +.|+||++|||+.... .|..||+.+|.+|.+.+
T Consensus 309 ~G~~p~~-~l~~~~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 309 DGRRPDI-NPITQAGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp CCEEECC-HHHHHTTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCcCc-hHHHhcCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 9999997 6777776641 24688875 66 5677 8999999999997665 89999999999999876
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.73 E-value=1.8e-17 Score=136.96 Aligned_cols=163 Identities=18% Similarity=0.154 Sum_probs=112.5
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhcC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQIG 253 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 253 (395)
+++|||+|.+|+++|..|++.|.+|+++++++ ..+++...-. .+ ..+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~-~~~~~~~~~~---~~-----~~~~~~~-------------------- 53 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR-SKVKGVSRVP---NY-----PGLLDEP-------------------- 53 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CTTTTCSCCC---CS-----TTCTTCC--------------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-CcccCchhhh---cc-----CCCcCCC--------------------
Confidence 68999999999999999999999999999987 3322100000 00 0000000
Q ss_pred CCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEecC----eEEEeCCcEecCcEEEEcCCCCCCCCccc
Q 039923 254 IQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTAK----GAEFVNRTVKEFDSIILATGYRSNVSSWL 328 (395)
Q Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~----~v~~~~g~~i~~D~vi~atG~~~~~~~~~ 328 (395)
..+.+...+.+.+++.++++..+ |.+++.. .+.+++| ++++|.||+|+|..|+ +.
T Consensus 54 ----------------~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~---~~ 113 (180)
T 2ywl_A 54 ----------------SGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT---LP 113 (180)
T ss_dssp ----------------CHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH---HH
T ss_pred ----------------CHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC---cc
Confidence 00111112233333344555444 5555432 3566677 8999999999999984 45
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCCeEEEEecccccc----cchhhHHHHHHHHHhhhcccc
Q 039923 329 KEASLFNQKNNNNPQDSYPKNWKGKNGVYSVGFARQGLL----GISMDAHKVADDIASQWNSET 388 (395)
Q Consensus 329 ~~~~l~~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~~----~a~~~g~~~a~~i~~~~~~~~ 388 (395)
+.++++ ++ +|++.+| ++++++.|+|||+|||+..+. .|..||+.+|.+|.+.++++.
T Consensus 114 ~~~g~~-~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 174 (180)
T 2ywl_A 114 SLLGLT-RR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRGEP 174 (180)
T ss_dssp HHHTCC-EE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ccCCCC-cc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhhcc
Confidence 667888 77 8989888 688899999999999997753 799999999999999887653
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.9e-20 Score=168.79 Aligned_cols=150 Identities=15% Similarity=0.078 Sum_probs=102.7
Q ss_pred CCCeEEECCChHHHHHHHHHHH--cCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE--RGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~--~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.+||+||||||+|++||++|++ .|++|+|||+...+||......+ .+ +... +.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~---~~--~~~~--------------------l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ---LF--SAMV--------------------MR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST---TC--CCEE--------------------EE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc---cC--CHHH--------------------HH
Confidence 4799999999999999999975 49999999999999885432111 00 0000 00
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCCCCCCCCCCcccEeecCCCCCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLPKIPGISEFRGRLLHTSTYKNG 167 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 167 (395)
......++++++++..+.. .....+.++++++ ..+..+.++|...+.+.....+..++.
T Consensus 120 ~~~~~~~~e~Gv~~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (326)
T 3fpz_A 120 KPAHLFLQELEIPYEDEGD-------------------YVVVKHAALFIST--VLSKVLQLPNVKLFNATCVEDLVTRPP 178 (326)
T ss_dssp TTTHHHHHHTTCCCEECSS-------------------EEEESCHHHHHHH--HHHHHHTSTTEEEETTEEEEEEEEESS
T ss_pred HHHHHHHHHcCCEEEECCc-------------------ceecceeEEEEcc--hhhhccccccceeecccccceeeccCC
Confidence 1123344556776543321 1233444566666 456666778876665554555455566
Q ss_pred cCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 168 VEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 168 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
....+++++++|+|.++++.|..+...+.++++..+..
T Consensus 179 ~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 179 TEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp CSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred cccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 66788999999999999999999998899999887765
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.72 E-value=1.5e-17 Score=154.65 Aligned_cols=186 Identities=17% Similarity=0.275 Sum_probs=115.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc---------CCcCc--eeeecCCcccc-----C-----
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL---------KIYDH--LQLHLPKQFCQ-----L----- 68 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~---------~~~~~--~~~~~~~~~~~-----~----- 68 (395)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.+.. +.... ..+.....+.. +
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 379999999999999999999999999999999877543321 00000 00000000000 0
Q ss_pred ------CCCCC--CCCCCCCC--CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCC--CCcEEEEEccEEEEeCEEEEe
Q 039923 69 ------PYVPF--PREYPAYP--SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAA--MGHWRVKTHEYEFMCRWLIVA 136 (395)
Q Consensus 69 ------~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~--~~~~~v~~~~~~~~~d~lVlA 136 (395)
...++ ..+-..++ ...++.+.+.+.+++.+++++++++|+++..+++ ++.|.|++++.++++|.||+|
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad~VVlA 163 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVA 163 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEESEEEEC
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECCEEEEC
Confidence 00000 00000011 5678888999999999999999999999987611 155888887778999999999
Q ss_pred eCCCCCCC------------------CCCCCCCCCCcccEeecCC-C---CCCcCCCCCeEEEEC---------------
Q 039923 137 TGENEVPV------------------LPKIPGISEFRGRLLHTST-Y---KNGVEFRASKVLVVG--------------- 179 (395)
Q Consensus 137 tG~~~~~~------------------~p~~~g~~~~~~~~~~~~~-~---~~~~~~~~~~v~VvG--------------- 179 (395)
||.++.|. .|..|++..+. ++... + ..... .+.++.|+|
T Consensus 164 tG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~---~~~~~~~~~~l~g~~-~~~~~~i~G~~~~~g~~l~t~~g~ 239 (401)
T 2gqf_A 164 TGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFT---YRETDKFLTALSGIS-LPVTITALCGKSFYNQLLFTHRGI 239 (401)
T ss_dssp CCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEE---CCGGGGGGGGGTTCE-EEEEEEETTSCEEEEEEEECSSEE
T ss_pred CCCccCCCCCCChHHHHHHHHCCCCcccCcceeecee---cCCchhhcccCCCee-eeeEEEEcCCceEEeCEEEECCCc
Confidence 99765443 13333332211 11111 1 11111 134566668
Q ss_pred CCcCHHHHHHHHhhCCCeEEE
Q 039923 180 CGNSGMEISFDLCKNGAQVSL 200 (395)
Q Consensus 180 ~G~~a~e~a~~l~~~g~~V~~ 200 (395)
+|..+++++..+.. +.++++
T Consensus 240 sG~~~l~~s~~~~~-~~~~~i 259 (401)
T 2gqf_A 240 SGPAVLQISNYWQP-TESVEI 259 (401)
T ss_dssp ESHHHHHHTTTCCT-TCCEEE
T ss_pred cHHHHHHHHHHHhc-CCEEEE
Confidence 89999999988865 666665
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.64 E-value=1.8e-15 Score=130.18 Aligned_cols=123 Identities=15% Similarity=0.030 Sum_probs=82.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.+||+|||||++|+.+|..|++.|.+|+|||+.....|.+........ .....+-.+.. ...+.+..+..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~--~~~~~~~~~~d-------~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF--PPGSLLERAYD-------PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC--CTTCHHHHHCC-------TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc--chhhHHhhhcc-------CCCCCHHHHHHH
Confidence 479999999999999999999999999999998433332211100000 00000000000 001156788899
Q ss_pred HHHHHHHc-CCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCC
Q 039923 90 MEAYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVP 143 (395)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~ 143 (395)
+.+.+++. +++++ +++|+++...++ ..+.+.+.+ .++.+|+||+|+|.++..
T Consensus 74 l~~~~~~~~gv~i~-~~~v~~i~~~~~-~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 74 AKYLLEGLRPLHLF-QATATGLLLEGN-RVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHTCTTEEEE-ECCEEEEEEETT-EEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred HHHHHHcCCCcEEE-EeEEEEEEEeCC-EEEEEEECCCCEEECCEEEECCCCChhh
Confidence 99999887 88887 578999987652 334566665 689999999999965443
No 98
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.62 E-value=1.3e-16 Score=151.59 Aligned_cols=191 Identities=16% Similarity=0.111 Sum_probs=104.6
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc--cccCCc-----C--ceee------------e----------
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL--WKLKIY-----D--HLQL------------H---------- 60 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~--~~~~~~-----~--~~~~------------~---------- 60 (395)
||+|||||++|+++|..|++.|.+|+|+||. ..+|. |.+... + .... .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44442 111100 0 0000 0
Q ss_pred -cCC---cc--ccCCCCC----CC-CCCC-----CCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcE-EEEE
Q 039923 61 -LPK---QF--CQLPYVP----FP-REYP-----AYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHW-RVKT 123 (395)
Q Consensus 61 -~~~---~~--~~~~~~~----~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~-~v~~ 123 (395)
.+. .+ ...++.. .+ ...+ .-.....+.+.+.+.+++.+++++.+++| .+..++ +.+ -+..
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEE
Confidence 000 00 0011000 00 0000 01234577788888888889999999999 887665 332 1232
Q ss_pred --ccEEEEeCEEEEeeCCCCCCCCCCCC-CCCCCcccEeecC-----CCCCCcCCC-CCeEEEECCCcCHHHHHHHHhhC
Q 039923 124 --HEYEFMCRWLIVATGENEVPVLPKIP-GISEFRGRLLHTS-----TYKNGVEFR-ASKVLVVGCGNSGMEISFDLCKN 194 (395)
Q Consensus 124 --~~~~~~~d~lVlAtG~~~~~~~p~~~-g~~~~~~~~~~~~-----~~~~~~~~~-~~~v~VvG~G~~a~e~a~~l~~~ 194 (395)
.+.++.+|.||+|||. .+..+.++ +.....+..+... ...+....+ ..+++++|+| +++++..+...
T Consensus 157 ~~~~g~~~a~~VVlAtGg--~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~ 232 (472)
T 2e5v_A 157 EKRGLVEDVDKLVLATGG--YSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGE 232 (472)
T ss_dssp TTTEEECCCSEEEECCCC--CGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHT
T ss_pred EeCCCeEEeeeEEECCCC--CcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCC
Confidence 3456889999999995 44444332 1111122111100 011111111 1234556766 77777777777
Q ss_pred CCeEEEEEecCceeeecc
Q 039923 195 GAQVSLVVRDKVHILPKK 212 (395)
Q Consensus 195 g~~V~~~~r~~~~~~p~~ 212 (395)
|..+ +..+.+ ++++..
T Consensus 233 G~~~-v~~~g~-rf~~~~ 248 (472)
T 2e5v_A 233 GAQI-INENGE-RFLFNY 248 (472)
T ss_dssp TCEE-EETTCC-CGGGGT
T ss_pred ceEE-ECCCCC-CCCccC
Confidence 8776 544444 666553
No 99
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.45 E-value=6.1e-13 Score=123.97 Aligned_cols=131 Identities=19% Similarity=0.228 Sum_probs=90.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC------------CcCceeeecCCccc----cC-----
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK------------IYDHLQLHLPKQFC----QL----- 68 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~------------~~~~~~~~~~~~~~----~~----- 68 (395)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.+... .........+.... .+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4799999999999999999999999999999998876533110 00000000000000 00
Q ss_pred ------CCCCC-----CCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEee
Q 039923 69 ------PYVPF-----PREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVAT 137 (395)
Q Consensus 69 ------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAt 137 (395)
...++ ...++ .....++.+.+.+.+++.+++++++++|++++.++ +.|.|++.+.++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~~V~~~~g~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGFRVTTSAGTVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETTEEEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECCcEEEeeEEEECC
Confidence 00000 00001 23567889999999999999999999999998876 668888887899999999999
Q ss_pred CCCCCC
Q 039923 138 GENEVP 143 (395)
Q Consensus 138 G~~~~~ 143 (395)
|.++.|
T Consensus 184 G~~S~p 189 (417)
T 3v76_A 184 GGKSIP 189 (417)
T ss_dssp CCSSCG
T ss_pred CCccCC
Confidence 976644
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.43 E-value=5.4e-13 Score=109.90 Aligned_cols=112 Identities=28% Similarity=0.353 Sum_probs=85.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
++||+|||||++|+.+|..|.+.|.+|+|+|+.+... ... .....++. ++......++.++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~---~~~----------~~~~~~~~------~~~~~~~~~~~~~ 61 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV---KGV----------SRVPNYPG------LLDEPSGEELLRR 61 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT---TTC----------SCCCCSTT------CTTCCCHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc---cCc----------hhhhccCC------CcCCCCHHHHHHH
Confidence 3789999999999999999999999999999986321 100 00001111 1122457889999
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.+++++.+ +|++++..+ +.+.+++++.++.+|.||+|+|. .+.+
T Consensus 62 l~~~~~~~gv~v~~~-~v~~i~~~~--~~~~v~~~~g~i~ad~vI~A~G~--~~~~ 112 (180)
T 2ywl_A 62 LEAHARRYGAEVRPG-VVKGVRDMG--GVFEVETEEGVEKAERLLLCTHK--DPTL 112 (180)
T ss_dssp HHHHHHHTTCEEEEC-CCCEEEECS--SSEEEECSSCEEEEEEEEECCTT--CCHH
T ss_pred HHHHHHHcCCEEEeC-EEEEEEEcC--CEEEEEECCCEEEECEEEECCCC--CCCc
Confidence 999999999999999 999998876 55778877668999999999994 4543
No 101
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.38 E-value=2.1e-12 Score=120.18 Aligned_cols=130 Identities=21% Similarity=0.200 Sum_probs=88.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC------------C----------cCceeeecCCcc--
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK------------I----------YDHLQLHLPKQF-- 65 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~------------~----------~~~~~~~~~~~~-- 65 (395)
.+||+|||||++|+++|..|++.|++|+|+|+....++..... . +.+.....+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 3799999999999999999999999999999997665422110 0 011111111100
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEEc---c-EEEEeCEEEEeeCCC
Q 039923 66 CQLPYVPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKTH---E-YEFMCRWLIVATGEN 140 (395)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~~---~-~~~~~d~lVlAtG~~ 140 (395)
..++.............+..+...+.+.+.+.|++++.+++|++++..+ +.+. |++. + .++.+|.||.|+|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 0111110001112345788899999999999999999999999998875 6555 6652 2 789999999999976
Q ss_pred C
Q 039923 141 E 141 (395)
Q Consensus 141 ~ 141 (395)
+
T Consensus 162 s 162 (397)
T 3cgv_A 162 S 162 (397)
T ss_dssp C
T ss_pred h
Confidence 5
No 102
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.38 E-value=2.5e-12 Score=124.74 Aligned_cols=131 Identities=23% Similarity=0.256 Sum_probs=87.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC--------------CcCce---eeecCCc-c-----
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK--------------IYDHL---QLHLPKQ-F----- 65 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~--------------~~~~~---~~~~~~~-~----- 65 (395)
+.+||+|||||++|+++|..|++.|++|+|||+........+.. .++.+ ....... +
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 45899999999999999999999999999999986543111000 00000 0000000 0
Q ss_pred --ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--cc--EEEEeCEEEEeeCC
Q 039923 66 --CQLPYVPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HE--YEFMCRWLIVATGE 139 (395)
Q Consensus 66 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~--~~~~~d~lVlAtG~ 139 (395)
..+............+.+..+...+.+.+.+.+++++++++|+.++.++ +.++|++ .+ .++++|+||.|+|.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0011111111112346889999999999999999999999999998876 6677776 33 58999999999997
Q ss_pred CC
Q 039923 140 NE 141 (395)
Q Consensus 140 ~~ 141 (395)
++
T Consensus 206 ~S 207 (570)
T 3fmw_A 206 RS 207 (570)
T ss_dssp SC
T ss_pred Cc
Confidence 65
No 103
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.35 E-value=5.2e-12 Score=117.35 Aligned_cols=131 Identities=19% Similarity=0.168 Sum_probs=86.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccc------cC----------------CcCceeeecCCccc-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWK------LK----------------IYDHLQLHLPKQFC- 66 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~------~~----------------~~~~~~~~~~~~~~- 66 (395)
.|||+||||||+|+++|+.|+++|++|+||||.+.++.... .. ...+.++..+....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 38999999999999999999999999999999876543111 00 01111111111100
Q ss_pred -cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EE--Ecc--EEEEeCEEEEeeCCC
Q 039923 67 -QLPYVPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VK--THE--YEFMCRWLIVATGEN 140 (395)
Q Consensus 67 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~--~~~--~~~~~d~lVlAtG~~ 140 (395)
................+..+...+.+.+.+.|++++++++|+.+..++ +.+. +. ..+ .++++|+||.|+|..
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccc
Confidence 000000001111235789999999999999999999999999988776 3322 22 222 579999999999975
Q ss_pred CC
Q 039923 141 EV 142 (395)
Q Consensus 141 ~~ 142 (395)
+.
T Consensus 162 S~ 163 (397)
T 3oz2_A 162 SE 163 (397)
T ss_dssp CH
T ss_pred cH
Confidence 53
No 104
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.34 E-value=1.6e-12 Score=125.49 Aligned_cols=169 Identities=14% Similarity=0.124 Sum_probs=101.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CcccccccCC---------------cCceeee-cCCccccCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES-CLASLWKLKI---------------YDHLQLH-LPKQFCQLPYVP 72 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~-~~~g~~~~~~---------------~~~~~~~-~~~~~~~~~~~~ 72 (395)
.+||+|||||++|++||..|++.|.+|+|||+.. .+|....... +.+.... .......+....
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 4799999999999999999999999999999974 3332100000 0000000 000000000000
Q ss_pred C---CCCC--CCCCCHHHHHHHHHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 73 F---PREY--PAYPSGQQFITYMEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 73 ~---~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
. +..+ ....++..+...+.+.+++ .++++ ++++|+.+..+++ ..+.|.+.+ ..+.++.||+|||. .+..
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g-~V~GV~t~dG~~I~Ad~VVLATGt--~s~~ 183 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEND-RVVGAVTQMGLKFRAKAVVLTVGT--FLDG 183 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSS-BEEEEEETTSEEEEEEEEEECCST--TTCC
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCC-EEEEEEECCCCEEECCEEEEcCCC--CccC
Confidence 0 0000 0123556788888888887 58888 5678999987652 334566655 78999999999995 4444
Q ss_pred CCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEE
Q 039923 146 PKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVV 202 (395)
Q Consensus 146 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~ 202 (395)
+.++|...+. +.+ +| |.++.+++..|.+.|.+|+.+.
T Consensus 184 ~~i~G~~~~~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 184 KIHIGLDNYS----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp EEECC---------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred ccccCcccCC----------------CCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 4566654311 222 56 7889999999999999998884
No 105
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.34 E-value=6.4e-12 Score=120.17 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=90.4
Q ss_pred CCCCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc--------------CCcCceeeecCCccccC---
Q 039923 6 KRFWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL--------------KIYDHLQLHLPKQFCQL--- 68 (395)
Q Consensus 6 ~~~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~--------------~~~~~~~~~~~~~~~~~--- 68 (395)
+..+.+||+||||||+|+++|..|++.|++|+|||+.+..+..-+. ...+.+.-..+.....+
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 86 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGL 86 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTE
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccce
Confidence 4456789999999999999999999999999999998654321100 00111100000000000
Q ss_pred --CCCCCCCC--CCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc----EEEEeCEEEEeeCCC
Q 039923 69 --PYVPFPRE--YPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE----YEFMCRWLIVATGEN 140 (395)
Q Consensus 69 --~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~----~~~~~d~lVlAtG~~ 140 (395)
........ .....++..+.+.+.+.+.+.+++++++++|++++.++ +.+++++.+ .++++|+||.|+|.+
T Consensus 87 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 87 PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 00000001 11234688999999999999999999999999999877 667777655 389999999999986
Q ss_pred CC
Q 039923 141 EV 142 (395)
Q Consensus 141 ~~ 142 (395)
|.
T Consensus 165 S~ 166 (500)
T 2qa1_A 165 SS 166 (500)
T ss_dssp CH
T ss_pred hH
Confidence 64
No 106
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.31 E-value=2.5e-11 Score=110.29 Aligned_cols=128 Identities=19% Similarity=0.199 Sum_probs=79.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccc-----------------------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFC----------------------- 66 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~----------------------- 66 (395)
++||+|||||++|+++|..|++.|++|+|||+...+||.+...............+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 479999999999999999999999999999999888775443222111111100000
Q ss_pred -----cCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEE-EeCEEEEe
Q 039923 67 -----QLPYVP---FPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEF-MCRWLIVA 136 (395)
Q Consensus 67 -----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~-~~d~lVlA 136 (395)
...... .......+.....+....+.+++ +++++++++|++++..+ +.|+|++++ ..+ .+|+||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~--~~~~v~~~~g~~~~~a~~vV~a 157 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPVSFSCRITEVFRGE--EHWNLLDAEGQNHGPFSHVIIA 157 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCEECSCCEEEEEECS--SCEEEEETTSCEEEEESEEEEC
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcEEecCEEEEEEEeC--CEEEEEeCCCcCccccCEEEEc
Confidence 000000 00000111111122223333333 78999999999999877 678888876 444 59999999
Q ss_pred eCCCC
Q 039923 137 TGENE 141 (395)
Q Consensus 137 tG~~~ 141 (395)
+|..+
T Consensus 158 ~g~~~ 162 (336)
T 1yvv_A 158 TPAPQ 162 (336)
T ss_dssp SCHHH
T ss_pred CCHHH
Confidence 99643
No 107
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.31 E-value=1.2e-11 Score=116.12 Aligned_cols=132 Identities=16% Similarity=0.172 Sum_probs=87.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC----cccccccCC--------------------cCceeeecCCcc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC----LASLWKLKI--------------------YDHLQLHLPKQF 65 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~----~~g~~~~~~--------------------~~~~~~~~~~~~ 65 (395)
.+||+|||||++|+++|..|++.|++|+|+|+... .|..+.... ..+.........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 37999999999999999999999999999999862 222111100 001111111111
Q ss_pred ccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-E--EEEeCEEEEeeCC
Q 039923 66 CQLPYVP---FPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-Y--EFMCRWLIVATGE 139 (395)
Q Consensus 66 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~--~~~~d~lVlAtG~ 139 (395)
..++... ..........+..+...+.+.+.+.|++++++++|++++..++...+.+.+.+ . ++.+|.||+|+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGY 164 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGG
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCC
Confidence 1111110 00112234678999999999999999999999999999987632223444454 3 7999999999996
Q ss_pred CC
Q 039923 140 NE 141 (395)
Q Consensus 140 ~~ 141 (395)
++
T Consensus 165 ~s 166 (421)
T 3nix_A 165 GR 166 (421)
T ss_dssp GC
T ss_pred ch
Confidence 54
No 108
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.30 E-value=9.8e-12 Score=118.87 Aligned_cols=134 Identities=18% Similarity=0.195 Sum_probs=90.1
Q ss_pred CCCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc--------------CCcCceee--ecCC-ccc--c
Q 039923 7 RFWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL--------------KIYDHLQL--HLPK-QFC--Q 67 (395)
Q Consensus 7 ~~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~--------------~~~~~~~~--~~~~-~~~--~ 67 (395)
.++.+||+||||||+|+++|..|++.|++|+|||+.+......+. ...+.+.- .... .+. .
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 356689999999999999999999999999999998654321100 00110000 0000 000 0
Q ss_pred CCCCCCCCCC--CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc----EEEEeCEEEEeeCCCC
Q 039923 68 LPYVPFPREY--PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE----YEFMCRWLIVATGENE 141 (395)
Q Consensus 68 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~----~~~~~d~lVlAtG~~~ 141 (395)
+......... ....++..+.+.+.+.+.+.+++++++++|++++.++ +.+++++.+ .++++|+||.|+|.+|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 0000011111 1235688999999999999999999999999999876 567777765 3899999999999866
Q ss_pred C
Q 039923 142 V 142 (395)
Q Consensus 142 ~ 142 (395)
.
T Consensus 167 ~ 167 (499)
T 2qa2_A 167 T 167 (499)
T ss_dssp H
T ss_pred H
Confidence 4
No 109
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.30 E-value=3.5e-12 Score=116.28 Aligned_cols=128 Identities=15% Similarity=0.151 Sum_probs=84.6
Q ss_pred CCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCcccccccCCc---CceeeecCCcccc----------------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE---RGVPSLIIEKESCLASLWKLKIY---DHLQLHLPKQFCQ---------------- 67 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~---~g~~v~lie~~~~~~g~~~~~~~---~~~~~~~~~~~~~---------------- 67 (395)
|+||+|||||++|+++|+.|++ .|++|+||||...+||.+..... .....+....+..
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 3689999999999999999999 89999999999988885443211 1111111111100
Q ss_pred --------CCC----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEE
Q 039923 68 --------LPY----VPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLI 134 (395)
Q Consensus 68 --------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lV 134 (395)
+.. .........+.....+..+.+.++++.+++++++++|++++..+ +.|+|++++ ..+.+|.||
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~--~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRD--DKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECS--SSEEEEESSSCCEEESEEE
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CEEEEEECCCCEEEcCEEE
Confidence 000 00000001112223344555566666689999999999999876 678898876 568999999
Q ss_pred EeeCC
Q 039923 135 VATGE 139 (395)
Q Consensus 135 lAtG~ 139 (395)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99984
No 110
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.29 E-value=3.3e-12 Score=122.07 Aligned_cols=134 Identities=21% Similarity=0.162 Sum_probs=88.7
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCc-eeeecCCccc-cCCCCCCCCCCCCCCCHHH
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDH-LQLHLPKQFC-QLPYVPFPREYPAYPSGQQ 85 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 85 (395)
...+||+|||||++|+++|..|++.|++|+|||+.+.+|+.......+. +......... .... +.........+.+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~ 167 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGR--FCTGTLDHISIRQ 167 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTT--TTCTTCCEEEHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccc--ccccccccCCHHH
Confidence 3468999999999999999999999999999999987764211111110 0000000000 0000 0001011245688
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcC-CCCcEEEEE----cc--EEEEeCEEEEeeCCCCCC
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDA-AMGHWRVKT----HE--YEFMCRWLIVATGENEVP 143 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~-~~~~~~v~~----~~--~~~~~d~lVlAtG~~~~~ 143 (395)
+.+.+.+.+++.+++++++++|++++..+ +.+.|.|++ ++ .++.+|+||+|+|..+.+
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 99999999999999999999999998752 224566776 33 479999999999965443
No 111
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.29 E-value=5.6e-12 Score=117.80 Aligned_cols=132 Identities=20% Similarity=0.249 Sum_probs=88.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc------c-------------cc-----CCcCceeeecCC-
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL------W-------------KL-----KIYDHLQLHLPK- 63 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~------~-------------~~-----~~~~~~~~~~~~- 63 (395)
..+||+|||||++|+++|+.|++.|++|+|||+....... + .. ............
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4589999999999999999999999999999998754210 0 00 001111111110
Q ss_pred --ccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEee
Q 039923 64 --QFCQLPYVPFP---REYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVAT 137 (395)
Q Consensus 64 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAt 137 (395)
....++..... ......+.+..+.+.+.+.+.+ ++++++++|+.++..+ +.+++++.+ +++.+|+||.|+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEET--TEEEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecC--CcEEEEEcCCCEEeeCEEEECC
Confidence 00111100000 0112335788899999888877 7889999999999887 678888877 789999999999
Q ss_pred CCCCCCC
Q 039923 138 GENEVPV 144 (395)
Q Consensus 138 G~~~~~~ 144 (395)
|.++..+
T Consensus 178 G~~S~vr 184 (407)
T 3rp8_A 178 GSHSALR 184 (407)
T ss_dssp CTTCSSH
T ss_pred CcChHHH
Confidence 9766543
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.29 E-value=7.6e-12 Score=115.73 Aligned_cols=133 Identities=17% Similarity=0.126 Sum_probs=85.1
Q ss_pred CCCCCCCCC-CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc------------------------CCcC
Q 039923 1 MSSKAKRFW-TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL------------------------KIYD 55 (395)
Q Consensus 1 m~~~~~~~~-~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~------------------------~~~~ 55 (395)
|+..++..+ .+||+|||||++|+++|..|++.|++|+|||+....+..-.. ....
T Consensus 1 m~~~~~~~m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~ 80 (379)
T 3alj_A 1 MANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPP 80 (379)
T ss_dssp ----------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCS
T ss_pred CCCccCCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCcc
Confidence 444443222 479999999999999999999999999999998765421000 0000
Q ss_pred ceeeecCC-ccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEE
Q 039923 56 HLQLHLPK-QFCQLPYVPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWL 133 (395)
Q Consensus 56 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~l 133 (395)
........ ....++. .........+..+.+.+.+.+.+.|++++++++|++++. + + .|++.+ .++.+|+|
T Consensus 81 ~~~~~~~g~~~~~~~~---~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~--~v~~~~g~~~~ad~v 152 (379)
T 3alj_A 81 TYETWMHNKSVSKETF---NGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V--G--RLTLQTGEVLEADLI 152 (379)
T ss_dssp CEEEEETTEEEEEECG---GGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--T--EEEETTSCEEECSEE
T ss_pred ceEEEeCCceeeeccC---CCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C--EEEECCCCEEEcCEE
Confidence 00000000 0000000 000022456789999999999999999999999999986 3 3 577765 78999999
Q ss_pred EEeeCCCC
Q 039923 134 IVATGENE 141 (395)
Q Consensus 134 VlAtG~~~ 141 (395)
|+|+|.++
T Consensus 153 V~AdG~~s 160 (379)
T 3alj_A 153 VGADGVGS 160 (379)
T ss_dssp EECCCTTC
T ss_pred EECCCccH
Confidence 99999654
No 113
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.28 E-value=8.7e-12 Score=117.79 Aligned_cols=134 Identities=19% Similarity=0.280 Sum_probs=87.7
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc-----CCcC------ceeeecC--Cccc-----cC-
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL-----KIYD------HLQLHLP--KQFC-----QL- 68 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~-----~~~~------~~~~~~~--~~~~-----~~- 68 (395)
.+.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.... +.+. .+....+ ..+. .+
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 34589999999999999999999999999999998876542110 0000 0000000 0000 00
Q ss_pred ----------CCCCCC-----CCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCE
Q 039923 69 ----------PYVPFP-----REYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRW 132 (395)
Q Consensus 69 ----------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~ 132 (395)
...++. ..++.......+.+.+.+.+++.+++++++++|+++...++ +.+.|++.+ .++.+|.
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~-~v~~V~~~~G~~i~Ad~ 182 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENG-QTKAVILQTGEVLETNH 182 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETTCCEEECSC
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCC-cEEEEEECCCCEEECCE
Confidence 000000 00011124578888888889999999999999999987652 337788776 5699999
Q ss_pred EEEeeCCCCC
Q 039923 133 LIVATGENEV 142 (395)
Q Consensus 133 lVlAtG~~~~ 142 (395)
||+|+|.++.
T Consensus 183 VVlAtGg~s~ 192 (447)
T 2i0z_A 183 VVIAVGGKSV 192 (447)
T ss_dssp EEECCCCSSS
T ss_pred EEECCCCCcC
Confidence 9999997663
No 114
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.28 E-value=2.2e-11 Score=112.73 Aligned_cols=62 Identities=15% Similarity=-0.001 Sum_probs=51.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCC
Q 039923 79 AYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEV 142 (395)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~ 142 (395)
.......+...+.+.+.+.|++++.+++|++++..+ +.|.|++++.++.+|.||+|+|.++.
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~v~~~~g~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EALFIKTPSGDVWANHVVVASGVWSG 220 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSEEEEETTEEEEEEEEEECCGGGTH
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEEEEEcCCceEEcCEEEECCChhHH
Confidence 345567889999999999999999999999998766 56677777778999999999997543
No 115
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.27 E-value=2.5e-11 Score=117.47 Aligned_cols=130 Identities=18% Similarity=0.171 Sum_probs=89.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC------------------------cCce------ee
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI------------------------YDHL------QL 59 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~------------------------~~~~------~~ 59 (395)
.+||+|||||++|+++|+.|++.|++|+|||+....+..-+... .... ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 47999999999999999999999999999999875432110000 0000 00
Q ss_pred e--cCCccc----cCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCC----cEEEEEc
Q 039923 60 H--LPKQFC----QLPY-----VPFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMG----HWRVKTH 124 (395)
Q Consensus 60 ~--~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~----~~~v~~~ 124 (395)
. ....+. .++. ...........++..+...+.+.+.+.+++++++++|++++.++ + .+++++.
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~~~v~v~~~ 162 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD--DDAGAGVTARLA 162 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC--GGGCSEEEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC--CCccccEEEEEE
Confidence 0 000000 0000 00000112346789999999999999999999999999999876 4 6777765
Q ss_pred c----EEEEeCEEEEeeCCCC
Q 039923 125 E----YEFMCRWLIVATGENE 141 (395)
Q Consensus 125 ~----~~~~~d~lVlAtG~~~ 141 (395)
+ .++++|+||.|+|.++
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTC
T ss_pred cCCCeEEEEeCEEEECCCCcc
Confidence 5 7899999999999765
No 116
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.27 E-value=5.4e-11 Score=113.97 Aligned_cols=132 Identities=19% Similarity=0.244 Sum_probs=85.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcc-------cccccCCcC----------c--------eeeecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLA-------SLWKLKIYD----------H--------LQLHLPK 63 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~-------g~~~~~~~~----------~--------~~~~~~~ 63 (395)
..+||+|||||++|+++|+.|++.|++|+|||+...++ +.|...... + +......
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 34899999999999999999999999999999987552 122211000 0 0000000
Q ss_pred --c----cc-cCCCCCCC-----CCC--CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEE
Q 039923 64 --Q----FC-QLPYVPFP-----REY--PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEF 128 (395)
Q Consensus 64 --~----~~-~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~ 128 (395)
. .. .+.....+ ... .+......+.+.+.+.+.+.|++++++++|+++...++ +.+.|++++ +++
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~-~v~gV~l~~G~~i 264 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG-QITGVTLSNGEEI 264 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSS-BEEEEEETTSCEE
T ss_pred ccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCC-EEEEEEECCCCEE
Confidence 0 00 00000000 000 00112356778888888889999999999999988752 345577776 789
Q ss_pred EeCEEEEeeCCCC
Q 039923 129 MCRWLIVATGENE 141 (395)
Q Consensus 129 ~~d~lVlAtG~~~ 141 (395)
.+|.||+|+|.++
T Consensus 265 ~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 265 KSRHVVLAVGHSA 277 (549)
T ss_dssp ECSCEEECCCTTC
T ss_pred ECCEEEECCCCCh
Confidence 9999999999765
No 117
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.25 E-value=2e-11 Score=113.66 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=84.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc-----ccccccCCcCcee------e-------ecCC--ccccCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL-----ASLWKLKIYDHLQ------L-------HLPK--QFCQLP 69 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~-----~g~~~~~~~~~~~------~-------~~~~--~~~~~~ 69 (395)
.+||+|||||++|+++|..|++.|++|+|||+.+.. |+.+........+ + ..+. .+....
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 479999999999999999999999999999998643 2222111000000 0 0000 000000
Q ss_pred C-----C--CC-CCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCC
Q 039923 70 Y-----V--PF-PREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGEN 140 (395)
Q Consensus 70 ~-----~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~ 140 (395)
. . +. .........+..+.+++.+.+.. .+++++++|++++..+ +.|+|++.+ .++.+|+||.|+|.+
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~v~~~~g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGK--KKWTLTFENKPSETADLVILANGGM 181 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECS--SSEEEEETTSCCEEESEEEECSCTT
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECC--CEEEEEECCCcEEecCEEEECCCcc
Confidence 0 0 00 00011235677888877776543 5788999999999876 678888876 689999999999976
Q ss_pred CCCC
Q 039923 141 EVPV 144 (395)
Q Consensus 141 ~~~~ 144 (395)
+..+
T Consensus 182 S~vR 185 (398)
T 2xdo_A 182 SKVR 185 (398)
T ss_dssp CSCC
T ss_pred hhHH
Confidence 5443
No 118
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.25 E-value=8.3e-11 Score=114.56 Aligned_cols=134 Identities=20% Similarity=0.238 Sum_probs=89.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc------CCCEEEEecCCCcccccccCC----------cCc----------------
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKER------GVPSLIIEKESCLASLWKLKI----------YDH---------------- 56 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~------g~~v~lie~~~~~~g~~~~~~----------~~~---------------- 56 (395)
+.+||+|||||++|+++|+.|++. |++|+||||...+++...... ++.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~ 113 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDR 113 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhh
Confidence 348999999999999999999999 999999999877654211000 000
Q ss_pred eeeecCCccccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--------
Q 039923 57 LQLHLPKQFCQLPYVP---FPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-------- 125 (395)
Q Consensus 57 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-------- 125 (395)
+..........++..+ +.......+.+..+.+.+.+.+++.|++++++++|+++..+++.....|++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~ 193 (584)
T 2gmh_A 114 FGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGA 193 (584)
T ss_dssp EEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSC
T ss_pred eeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCC
Confidence 0000000011111111 11111234578899999999999999999999999999887532233365542
Q ss_pred --------EEEEeCEEEEeeCCCCC
Q 039923 126 --------YEFMCRWLIVATGENEV 142 (395)
Q Consensus 126 --------~~~~~d~lVlAtG~~~~ 142 (395)
.++++|+||+|+|.++.
T Consensus 194 ~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 194 PKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEEEECCCEEECSEEEECCCTTCH
T ss_pred cccccCCceEEECCEEEEeeCCCch
Confidence 47999999999997653
No 119
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.24 E-value=4.2e-11 Score=110.36 Aligned_cols=62 Identities=19% Similarity=0.165 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCC
Q 039923 83 GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLP 146 (395)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p 146 (395)
...+...+.+.+.+.|++++.+++|++++..+ +.|.+++++.++.+|.||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~v~~~~g~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGVTIETADGEYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESSCEEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEEEEEECCCeEEcCEEEEcCCccHHhhcc
Confidence 45788888888888999999999999999876 557788777679999999999987654433
No 120
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.23 E-value=1.7e-11 Score=114.06 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=85.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc------c-c-cccc--------CC----------cCceeeecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL------A-S-LWKL--------KI----------YDHLQLHLPK 63 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~------~-g-~~~~--------~~----------~~~~~~~~~~ 63 (395)
.+||+|||||++|+++|..|++.|++|+|+|+.... + + ++.. .. +..+......
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 479999999999999999999999999999998642 1 1 1100 00 0111111010
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE-cc-E--EEEeCEEEEeeC
Q 039923 64 QFCQLPYVPFP-REYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT-HE-Y--EFMCRWLIVATG 138 (395)
Q Consensus 64 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~-~~-~--~~~~d~lVlAtG 138 (395)
....++..... ........+..+.+.+.+.+.+.+++++++++|++++..++ +.+.|++ ++ . ++++|+||.|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCEEEEEETTEEEEEECSEEEECCC
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceEEEEecCCcEEEEEeCEEEECCC
Confidence 00000000000 01112346678888888888888999999999999987532 3455665 33 4 799999999999
Q ss_pred CCCCCC
Q 039923 139 ENEVPV 144 (395)
Q Consensus 139 ~~~~~~ 144 (395)
.++..+
T Consensus 161 ~~S~vr 166 (394)
T 1k0i_A 161 FHGISR 166 (394)
T ss_dssp TTCSTG
T ss_pred CCcHHH
Confidence 766543
No 121
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.22 E-value=1.7e-11 Score=117.99 Aligned_cols=170 Identities=13% Similarity=0.064 Sum_probs=106.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CcccccccCCcCce---ee-----ecCCc--------cccCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES-CLASLWKLKIYDHL---QL-----HLPKQ--------FCQLPYVP 72 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~-~~~g~~~~~~~~~~---~~-----~~~~~--------~~~~~~~~ 72 (395)
.+||+|||||++|++||..|++.|.+|+|||+.. .+|..-......+. .+ ..... ...+....
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 4899999999999999999999999999999974 34321000000000 00 00000 00000000
Q ss_pred CCCC-----CCCCCCHHHHHHHHHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 73 FPRE-----YPAYPSGQQFITYMEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 73 ~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
...+ .....++..+...+.+.+++ .++++ ++++|+.+..+++ ..+.|.+.+ ..+.++.||+|||. .+..
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g-~V~GV~t~dG~~i~AdaVVLATG~--~s~~ 182 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNN-QVVGVRTNLGVEYKTKAVVVTTGT--FLNG 182 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSS-BEEEEEETTSCEEECSEEEECCTT--CBTC
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCC-EEEEEEECCCcEEEeCEEEEccCC--CccC
Confidence 0000 00123567888889988887 48888 5778999887652 333466655 78999999999994 4454
Q ss_pred CCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEe
Q 039923 146 PKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVR 203 (395)
Q Consensus 146 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r 203 (395)
+.++|...+. ..+ + |+.++.+++..|.+.|.+++.+.+
T Consensus 183 ~~~~G~~~~~----------------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 183 VIYIGDKMIP----------------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EEEETTEEEE----------------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred ceeccceecC----------------CCC---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 5556644211 111 2 367889999999999999877754
No 122
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.21 E-value=7.1e-11 Score=111.40 Aligned_cols=62 Identities=10% Similarity=0.124 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHHHcCCccccCc---eEEEEEEcCCCCcEE-EEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQ---EVQWAKYDAAMGHWR-VKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~---~V~~v~~~~~~~~~~-v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
....+...+.+.+++.|++++.++ +|+++...+ +.+. |++.+ .++.+|.||+|+|.++....
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 456788889999999999999999 999998876 6676 77777 68999999999998754433
No 123
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.21 E-value=2.4e-11 Score=113.20 Aligned_cols=131 Identities=17% Similarity=0.151 Sum_probs=88.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccc-----cccc---------CC----------cCceeeecC-C-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLAS-----LWKL---------KI----------YDHLQLHLP-K- 63 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g-----~~~~---------~~----------~~~~~~~~~-~- 63 (395)
.+||+|||||++|+++|..|++.|++|+|||+...... .+.. .. ...+..... .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 47999999999999999999999999999999865411 0000 00 000100000 0
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHc-CCccccCceEEEEEEcCCCCcE--EEEEcc-EEEEeCEEEEeeC
Q 039923 64 QFCQLPYVPFP-REYPAYPSGQQFITYMEAYANHF-EIEPLLGQEVQWAKYDAAMGHW--RVKTHE-YEFMCRWLIVATG 138 (395)
Q Consensus 64 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~--~v~~~~-~~~~~d~lVlAtG 138 (395)
....++..... ........+..+.+.+.+.+.+. +++++++++|++++.++ +.+ .+++.+ +++.+|.||+|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTSCEEEEEEEEECCC
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCCCEEECCEEEECCC
Confidence 01111110000 01123467889999999999988 89999999999999876 556 687766 6899999999999
Q ss_pred CCCC
Q 039923 139 ENEV 142 (395)
Q Consensus 139 ~~~~ 142 (395)
.++.
T Consensus 164 ~~s~ 167 (399)
T 2x3n_A 164 IASY 167 (399)
T ss_dssp TTCH
T ss_pred CChH
Confidence 7653
No 124
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.20 E-value=8e-11 Score=113.17 Aligned_cols=132 Identities=17% Similarity=0.240 Sum_probs=86.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC----CcccccccC----------CcCc-----ee------eecCCc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES----CLASLWKLK----------IYDH-----LQ------LHLPKQ 64 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~----~~~g~~~~~----------~~~~-----~~------~~~~~~ 64 (395)
.+||+|||||++|+++|+.|++.|++|+|||+.. ..|..+... .++. .. ......
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 4799999999999999999999999999999986 222211110 0000 00 000000
Q ss_pred ----cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCc---EEEEEcc---EEEEeCEE
Q 039923 65 ----FCQLPYVPF-PREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGH---WRVKTHE---YEFMCRWL 133 (395)
Q Consensus 65 ----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~---~~v~~~~---~~~~~d~l 133 (395)
...+...+. .......+.+..+...+.+.+.+.|++++++++|+++...+ +. +++...+ .++.+|.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEE
Confidence 000110000 01112346788999999999999999999999999999865 43 3344433 48999999
Q ss_pred EEeeCCCCCC
Q 039923 134 IVATGENEVP 143 (395)
Q Consensus 134 VlAtG~~~~~ 143 (395)
|+|+|.++..
T Consensus 165 I~AdG~~S~v 174 (512)
T 3e1t_A 165 VDASGNRTRV 174 (512)
T ss_dssp EECCCTTCSS
T ss_pred EECCCcchHH
Confidence 9999976543
No 125
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.19 E-value=1.2e-10 Score=113.24 Aligned_cols=130 Identities=13% Similarity=0.081 Sum_probs=86.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccc----cccc---------CCc-----------CceeeecCCc--
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLAS----LWKL---------KIY-----------DHLQLHLPKQ-- 64 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g----~~~~---------~~~-----------~~~~~~~~~~-- 64 (395)
+||+|||||++|+++|..|++.|++|+|||+...... .... ..+ ..........
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~~ 103 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQA 103 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCCc
Confidence 7999999999999999999999999999999853221 0000 000 0000000000
Q ss_pred --cccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--c--EEEEeCEEEE
Q 039923 65 --FCQLPYVP---FPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--E--YEFMCRWLIV 135 (395)
Q Consensus 65 --~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~--~~~~~d~lVl 135 (395)
...+.... +.........+..+...+.+.+.+.|++++.+++|+.++..++ ..+.|++. + .++.+|.||.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g-~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 104 PWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDP-DRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp CEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCST-TCEEEEEEETTEEEEEEESEEEE
T ss_pred cceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEEEecCCceEEEEcCEEEE
Confidence 00011000 0111122467889999999999999999999999999987632 56677765 3 5899999999
Q ss_pred eeCCCC
Q 039923 136 ATGENE 141 (395)
Q Consensus 136 AtG~~~ 141 (395)
|+|.++
T Consensus 183 AdG~~S 188 (591)
T 3i3l_A 183 AGGSGG 188 (591)
T ss_dssp CCGGGC
T ss_pred CCCCcc
Confidence 999754
No 126
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.19 E-value=3.6e-11 Score=111.18 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~ 141 (395)
.....+...+.+.+++.|++++.+++|++++..+ +.|.|++++.++.+|.||+|+|.++
T Consensus 151 ~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 151 IDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GAWEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TEEEEECSSEEEEESEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--CeEEEEeCCCEEEcCEEEECCChhH
Confidence 3456788888888999999999999999999876 5588888878999999999999765
No 127
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.16 E-value=2.9e-10 Score=105.73 Aligned_cols=129 Identities=16% Similarity=0.123 Sum_probs=82.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc----cc-cccc-CC---cCceee-----ecCCc---cccC-CCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL----AS-LWKL-KI---YDHLQL-----HLPKQ---FCQL-PYV 71 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~----~g-~~~~-~~---~~~~~~-----~~~~~---~~~~-~~~ 71 (395)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. +. .... .. ...+-+ ..+.. +... ...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 479999999999999999999999999999998653 11 1000 00 000000 00000 0000 000
Q ss_pred CCC--CCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC
Q 039923 72 PFP--REYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV 142 (395)
Q Consensus 72 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~ 142 (395)
... ........+..+.+.+.+.+ .+++++++++|++++..+ +.+++++.+ .++.+|+||.|+|.++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECS--SCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEEEEECCCCEEECCEEEECCCcchh
Confidence 000 00011234567777776654 378899999999999876 668888876 68999999999997654
No 128
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.15 E-value=1.7e-10 Score=102.08 Aligned_cols=129 Identities=16% Similarity=0.181 Sum_probs=80.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCccc-ccccC-CcCceeeecCC-ccccCCCCCCCCCCCC--CCCH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER-GVPSLIIEKESCLAS-LWKLK-IYDHLQLHLPK-QFCQLPYVPFPREYPA--YPSG 83 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~~~~g-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 83 (395)
.+||+|||||++|+++|..|++. |.+|+|||+...+++ .|... .+..+.+..+. .++..-..++...... ....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999997 999999999988765 33221 11111111100 0000000111000000 1145
Q ss_pred HHHHHHHHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEc---------c------EEEEeCEEEEeeCC
Q 039923 84 QQFITYMEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTH---------E------YEFMCRWLIVATGE 139 (395)
Q Consensus 84 ~~~~~~~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~---------~------~~~~~d~lVlAtG~ 139 (395)
.++...+.+.+.+ .+++++.+++|+.+...++ ...-+.+. + ..+.+|.||+|+|.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~-~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN-RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETT-EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCC-eEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 6777777766655 6899999999999987652 21123321 1 68999999999994
No 129
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.15 E-value=7.7e-11 Score=111.58 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=84.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc--ccccccC-----CcCceee----------ecCCccccCCCC-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL--ASLWKLK-----IYDHLQL----------HLPKQFCQLPYV- 71 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~--~g~~~~~-----~~~~~~~----------~~~~~~~~~~~~- 71 (395)
.+||+|||||++|+++|..|++.|++|+|+|+.... +..+... .+..+.+ .........+..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 479999999999999999999999999999998753 1111100 0000000 000000000000
Q ss_pred ---CCCCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEE----ccE--EEEeCEEEEeeCCCC
Q 039923 72 ---PFPREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKT----HEY--EFMCRWLIVATGENE 141 (395)
Q Consensus 72 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~----~~~--~~~~d~lVlAtG~~~ 141 (395)
.++ ......++..+.+.+.+.+.+.|++++++++|++++.++ +.+. |++ +++ ++.+|.||.|+|.++
T Consensus 86 ~~~~~~-~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 86 TVWTVN-GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp CEEEEE-EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred eEEeEC-CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 000 001235788899999999998999999999999998865 4432 333 333 899999999999765
Q ss_pred C
Q 039923 142 V 142 (395)
Q Consensus 142 ~ 142 (395)
.
T Consensus 163 ~ 163 (453)
T 3atr_A 163 S 163 (453)
T ss_dssp T
T ss_pred h
Confidence 4
No 130
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.15 E-value=3.7e-11 Score=116.01 Aligned_cols=171 Identities=18% Similarity=0.159 Sum_probs=103.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CcccccccCC---------------cCceeee-cCCccccCCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES-CLASLWKLKI---------------YDHLQLH-LPKQFCQLPYV 71 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~-~~~g~~~~~~---------------~~~~~~~-~~~~~~~~~~~ 71 (395)
..+||+|||||++|++||..|++.|.+|+|+|+.. .+|+.+.... +.+.... .......+...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 35899999999999999999999999999999974 3443221100 0000000 00000000000
Q ss_pred C---CCCCC--CCCCCHHHHHHHHHHHHHHc-CCccccCceEEEEEEcCCCCcEE-EEEcc-EEEEeCEEEEeeCCCCCC
Q 039923 72 P---FPREY--PAYPSGQQFITYMEAYANHF-EIEPLLGQEVQWAKYDAAMGHWR-VKTHE-YEFMCRWLIVATGENEVP 143 (395)
Q Consensus 72 ~---~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~-v~~~~-~~~~~d~lVlAtG~~~~~ 143 (395)
. .+... ....++..+...+.+.+++. +++++ +.+|+.+..++ +.+. |.+.+ ..+.++.||+|||.++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s-- 174 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFL-- 174 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCB--
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCC--
Confidence 0 00000 01245678888888888875 88874 55888887765 4443 66655 7899999999999543
Q ss_pred CCCCCCCCCCCcccEeecCCCCCCcCCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEe
Q 039923 144 VLPKIPGISEFRGRLLHTSTYKNGVEFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVR 203 (395)
Q Consensus 144 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r 203 (395)
..+.++|...+. +.++ + |+..+++++..|.+.|.+|..+..
T Consensus 175 ~~~i~~G~~~~~----------------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 175 NGLIHIGMDHFP----------------GGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp TCEEEETTEEEE----------------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred Cccceeeeeeec----------------cccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 322233322110 0111 1 367788999999999999876644
No 131
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.15 E-value=1.1e-10 Score=107.25 Aligned_cols=61 Identities=13% Similarity=0.166 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc---EEEEeCEEEEeeCCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE---YEFMCRWLIVATGENEV 142 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~---~~~~~d~lVlAtG~~~~ 142 (395)
.....+...+.+.+++.|++++++++|++++..++ +.+.|.+.+ .++.+|.||+|+|.++.
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 147 VDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 34567888888999999999999999999998753 447787765 48999999999998653
No 132
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.14 E-value=3.2e-10 Score=104.83 Aligned_cols=59 Identities=17% Similarity=0.045 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEEccEEEEeCEEEEeeCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~~~~~~~~d~lVlAtG~~~ 141 (395)
.....+...+.+.+++.|++++.+++|++++..+ +.+. |++.+.++.+|.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhH
Confidence 4567788888888999999999999999999876 6666 777767899999999999764
No 133
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.14 E-value=3e-10 Score=110.04 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=84.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC------------------------CcCc----eeee--
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK------------------------IYDH----LQLH-- 60 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~------------------------~~~~----~~~~-- 60 (395)
+||+|||||++|+++|..|++.|++|+|||+.+..+...+.. .... ....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 699999999999999999999999999999987654211110 0000 0000
Q ss_pred cCCccccCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc------E
Q 039923 61 LPKQFCQLPYVPF--------PREYPAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE------Y 126 (395)
Q Consensus 61 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~------~ 126 (395)
....+..++.... ........++..+.+.+.+.+.+. ++++++|++++.++ +.+++++.+ .
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRD--DHVRATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECS--SCEEEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeC--CEEEEEEEECCCCCEE
Confidence 0001111111000 001112357888999999888876 88899999998876 556666543 5
Q ss_pred EEEeCEEEEeeCCCCC
Q 039923 127 EFMCRWLIVATGENEV 142 (395)
Q Consensus 127 ~~~~d~lVlAtG~~~~ 142 (395)
++++|+||.|+|.++.
T Consensus 182 ~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 182 AVHARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEEEECCCTTCH
T ss_pred EEEeCEEEECCCCCcH
Confidence 7999999999997664
No 134
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.13 E-value=3e-10 Score=105.33 Aligned_cols=58 Identities=16% Similarity=0.106 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~ 141 (395)
....+...+.+.+++.|++++.+++|++++..+ +.|.+++++.++.+|.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKVLTHTRVEDFDISP--DSVKIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCEEEEETTEEEEEEEEEECCGGGH
T ss_pred eHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeEEEEeCCCEEEeCEEEEecCccH
Confidence 346788888888999999999999999999876 5577888777899999999999754
No 135
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.12 E-value=5.7e-10 Score=109.97 Aligned_cols=133 Identities=17% Similarity=0.147 Sum_probs=87.7
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCCcccccccC--------------C----------cCceeeecC--
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-RGVPSLIIEKESCLASLWKLK--------------I----------YDHLQLHLP-- 62 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-~g~~v~lie~~~~~~g~~~~~--------------~----------~~~~~~~~~-- 62 (395)
.+||+|||||++|+++|..|++ .|++|+|||+.+......+.. . ........+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4799999999999999999999 999999999986543211110 0 000000000
Q ss_pred ---Cccc---cCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHcCC--ccccCceEEEEEEcCC--CCcEEEEEc------
Q 039923 63 ---KQFC---QLPYVPFP--REYPAYPSGQQFITYMEAYANHFEI--EPLLGQEVQWAKYDAA--MGHWRVKTH------ 124 (395)
Q Consensus 63 ---~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~V~~v~~~~~--~~~~~v~~~------ 124 (395)
.... .++..... ........+..+...+.+.+.+.++ +++++++|++++.+++ ...+.+++.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0000 00000000 0011245788999999999999976 8999999999988752 135666643
Q ss_pred -c--EEEEeCEEEEeeCCCCC
Q 039923 125 -E--YEFMCRWLIVATGENEV 142 (395)
Q Consensus 125 -~--~~~~~d~lVlAtG~~~~ 142 (395)
+ .++++|+||.|+|.++.
T Consensus 192 ~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp TTCEEEEEEEEEEECCCTTCH
T ss_pred CCCeEEEEeCEEEECCCcchH
Confidence 3 68999999999997664
No 136
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.11 E-value=3.1e-10 Score=112.77 Aligned_cols=59 Identities=8% Similarity=0.080 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV 142 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~ 142 (395)
....+...+.+.+++.|++++++++|+++..++ +.|.|++.+ .++.+|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeEEEEECCCCEEECCEEEECCCcchh
Confidence 456788888888889999999999999999887 668888866 78999999999998643
No 137
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.10 E-value=8.4e-10 Score=103.07 Aligned_cols=131 Identities=17% Similarity=0.106 Sum_probs=84.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCCCccccccc--------------CCc----------CceeeecCC-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVP-SLIIEKESCLASLWKL--------------KIY----------DHLQLHLPK- 63 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~-v~lie~~~~~~g~~~~--------------~~~----------~~~~~~~~~- 63 (395)
.+||+|||||++|+++|..|++.|++ |+|||+.+.++..... ..+ ..+......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 37999999999999999999999999 9999998754321100 000 000000000
Q ss_pred -ccccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-cC-CccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCE
Q 039923 64 -QFCQLPYV-PFPREYP-AYPSGQQFITYMEAYANH-FE-IEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRW 132 (395)
Q Consensus 64 -~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~ 132 (395)
.....+.. ......+ ..+.+..+.+.+.+.+.+ .+ ++++++++|++++. + +.+++++. + .++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccEEEEecCCCCCceEEecCE
Confidence 00000000 0000111 235678899999888876 46 57999999999988 5 45667654 3 5899999
Q ss_pred EEEeeCCCCCC
Q 039923 133 LIVATGENEVP 143 (395)
Q Consensus 133 lVlAtG~~~~~ 143 (395)
||.|+|.++..
T Consensus 161 vV~AdG~~S~v 171 (410)
T 3c96_A 161 LVGADGIHSAV 171 (410)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCccchh
Confidence 99999976644
No 138
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.09 E-value=4.2e-10 Score=104.85 Aligned_cols=60 Identities=15% Similarity=0.022 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~ 141 (395)
.....+...+.+.+++.|++++.+++|++++..++ +.+.|++++.++.+|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGE-KVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSS-BEEEEEETTCCEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCC-EEEEEEeCCceEECCEEEECCchhH
Confidence 44567888888889999999999999999988752 4466777666899999999999754
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.09 E-value=9.2e-10 Score=109.56 Aligned_cols=59 Identities=15% Similarity=0.115 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-E-EEEeCEEEEeeCCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-Y-EFMCRWLIVATGENEV 142 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~-~~~~d~lVlAtG~~~~ 142 (395)
....+...+.+.+.+.|++++.+++|+++...+ +.|.|.+.+ . ++.+|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 456788888888888999999999999999877 568888876 5 8999999999998654
No 140
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.08 E-value=6e-10 Score=103.58 Aligned_cols=57 Identities=16% Similarity=0.049 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC
Q 039923 83 GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~ 141 (395)
...+...+.+.+.+.|++++.+++|++++..+ +.+.|++++.++.+|.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA--DGVSVTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEEEEECCCEEEcCEEEEcCCcCh
Confidence 35677778888888899999999999998876 5677877777899999999999753
No 141
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.07 E-value=1.3e-09 Score=106.19 Aligned_cols=133 Identities=21% Similarity=0.180 Sum_probs=85.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC--Cc----Ccee----e------------------ec
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK--IY----DHLQ----L------------------HL 61 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~--~~----~~~~----~------------------~~ 61 (395)
.+||+|||||++|+++|+.|+++|++|+||||.+.+||..... .. .... + ..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4799999999999999999999999999999998877632210 00 0000 0 00
Q ss_pred CC-------------ccccCCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcC
Q 039923 62 PK-------------QFCQLPYVPFP-------REYP-------AYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDA 114 (395)
Q Consensus 62 ~~-------------~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~ 114 (395)
+. .++.....++. ..++ .......+...+.+.+.+.+++++++++|+++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 00 00000000110 0000 112356888999999999999999999999998765
Q ss_pred CCCc--EEEEE-cc--EEEEeCEEEEeeCCCCC
Q 039923 115 AMGH--WRVKT-HE--YEFMCRWLIVATGENEV 142 (395)
Q Consensus 115 ~~~~--~~v~~-~~--~~~~~d~lVlAtG~~~~ 142 (395)
+.+. +.+.. ++ .++.++.||+|||.++.
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 2232 33333 33 37999999999997553
No 142
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.06 E-value=7e-10 Score=99.23 Aligned_cols=132 Identities=20% Similarity=0.222 Sum_probs=81.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCccc-ccccCC-cCceeeecCC-ccccCCCCCCC--CCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLAS-LWKLKI-YDHLQLHLPK-QFCQLPYVPFP--REYPAYPS 82 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g-~~~~~~-~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 82 (395)
.+||+|||||++|+++|+.|+++ |++|+|||+...+|+ .|.... +....+..+. .+......++. ..+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 48999999999999999999998 999999999987764 443221 2222211110 00000001110 01111123
Q ss_pred HHHHHHHHHHHHHH-cCCccccCceEEEEEEcCCC---------------C--cE-EEEE---------------ccEEE
Q 039923 83 GQQFITYMEAYANH-FEIEPLLGQEVQWAKYDAAM---------------G--HW-RVKT---------------HEYEF 128 (395)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~~~~~~~V~~v~~~~~~---------------~--~~-~v~~---------------~~~~~ 128 (395)
..++.+.+.+.+.+ .+++++.++.|+.+..+++. + .+ -|.. +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 56677777777777 48999999999888765420 1 11 0111 11579
Q ss_pred EeCEEEEeeCCCC
Q 039923 129 MCRWLIVATGENE 141 (395)
Q Consensus 129 ~~d~lVlAtG~~~ 141 (395)
++++||+|||..+
T Consensus 239 ~Ak~VV~ATG~~s 251 (344)
T 3jsk_A 239 NAPVIISTTGHDG 251 (344)
T ss_dssp ECSEEEECCCSSS
T ss_pred EcCEEEECCCCCc
Confidence 9999999999644
No 143
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.06 E-value=5.9e-10 Score=104.00 Aligned_cols=128 Identities=16% Similarity=0.095 Sum_probs=76.5
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc-------cccCCc---Cce-------------ee-ecCCccc-
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL-------WKLKIY---DHL-------------QL-HLPKQFC- 66 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~-------~~~~~~---~~~-------------~~-~~~~~~~- 66 (395)
+|+||||||+|+++|..|++.|++|+||||.+.+... +..... ..+ .. .....+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 6999999999999999999999999999997644210 000000 000 00 0000000
Q ss_pred ------cCCCC--CCCCCC----CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEE
Q 039923 67 ------QLPYV--PFPREY----PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWL 133 (395)
Q Consensus 67 ------~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~l 133 (395)
..... +..... ...+.+..+.+.+.+ ..+..++++++|++++..++ +.+++++++ +++++|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~---~~~~~v~~~~~v~~~~~~~~-~~v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK---GLANTIQWNKTFVRYEHIEN-GGIKIFFADGSHENVDVL 158 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHT---TCTTTEECSCCEEEEEECTT-SCEEEEETTSCEEEESEE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHh---hccceEEEEEEEEeeeEcCC-CeEEEEECCCCEEEeeEE
Confidence 00000 000000 011234555554433 33456889999999987654 567788877 88999999
Q ss_pred EEeeCCCCCC
Q 039923 134 IVATGENEVP 143 (395)
Q Consensus 134 VlAtG~~~~~ 143 (395)
|.|.|.+|..
T Consensus 159 VgADG~~S~v 168 (412)
T 4hb9_A 159 VGADGSNSKV 168 (412)
T ss_dssp EECCCTTCHH
T ss_pred EECCCCCcch
Confidence 9999976644
No 144
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.02 E-value=2.7e-09 Score=103.71 Aligned_cols=134 Identities=19% Similarity=0.206 Sum_probs=85.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc--CCc----C----------cee------------ee
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL--KIY----D----------HLQ------------LH 60 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~--~~~----~----------~~~------------~~ 60 (395)
..+||||||||++|+++|+.|++.|.+|+||||.+.++|.... ... . ... ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 3479999999999999999999999999999999877652111 000 0 000 00
Q ss_pred cCC-------------ccc---cCCC--------CCCCCCC---CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEc
Q 039923 61 LPK-------------QFC---QLPY--------VPFPREY---PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYD 113 (395)
Q Consensus 61 ~~~-------------~~~---~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~ 113 (395)
.+. .++ ..++ ..++... ........+...+.+.+.+.+++++++++|+++..+
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN 279 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC
Confidence 000 000 0000 0000000 011346778899999999999999999999999876
Q ss_pred CCCCc--EEEEE-cc--EEEEeCEEEEeeCCCCC
Q 039923 114 AAMGH--WRVKT-HE--YEFMCRWLIVATGENEV 142 (395)
Q Consensus 114 ~~~~~--~~v~~-~~--~~~~~d~lVlAtG~~~~ 142 (395)
++.+. +.+.. ++ .++.++.||+|||.++.
T Consensus 280 ~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 280 DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 52232 33333 23 37999999999997654
No 145
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.00 E-value=1.2e-09 Score=102.63 Aligned_cols=54 Identities=17% Similarity=0.103 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEEccEEEEeCEEEEeeCCCC
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~~~~~~~~d~lVlAtG~~~ 141 (395)
+.+.+.+.+++.|++++++++|+++...+ +.+. |+++++++.+|.||+|+|.+.
T Consensus 198 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 198 IIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHH
Confidence 44555666777899999999999999876 5665 777778999999999999643
No 146
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.99 E-value=2e-09 Score=103.23 Aligned_cols=53 Identities=11% Similarity=0.099 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEEcc-EEEEeCEEEEeeCCC
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKTHE-YEFMCRWLIVATGEN 140 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~~~-~~~~~d~lVlAtG~~ 140 (395)
+.+.+.+.+++.|.+++++++|++|..++ +.++ |++++ +++.+|.||.+++..
T Consensus 223 l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 223 LVQGMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC--
T ss_pred hHHHHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHH
Confidence 44556677778899999999999999887 5544 67766 899999999998853
No 147
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.98 E-value=9.9e-10 Score=102.97 Aligned_cols=39 Identities=33% Similarity=0.531 Sum_probs=36.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccc
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLW 49 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~ 49 (395)
.||+|||||++|+++|++|++.|++|+|+|+.+.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCcee
Confidence 379999999999999999999999999999998888743
No 148
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.97 E-value=9e-10 Score=106.56 Aligned_cols=61 Identities=11% Similarity=0.105 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV 142 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~ 142 (395)
..+..+...+.+.+.+.|++++.+ +|+.++..++...+.|++.+ +++.+|+||+|+|.++.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 466889999999999999999888 89999886533345677766 68999999999997554
No 149
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.97 E-value=1.3e-09 Score=104.91 Aligned_cols=63 Identities=17% Similarity=0.126 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCC
Q 039923 80 YPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVP 143 (395)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~ 143 (395)
...+..+...+.+.+.+.|++++.+ +|++++.+++...+.|++.+ +++.+|+||.|+|.++..
T Consensus 169 ~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 169 HFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3578899999999999999999999 89999886533335677766 589999999999976543
No 150
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.96 E-value=3.7e-09 Score=94.03 Aligned_cols=104 Identities=21% Similarity=0.316 Sum_probs=66.6
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCccc-ccccC-CcCceeeecCC-ccccCCCCCCC--CCCCCCCCH
Q 039923 11 PGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLAS-LWKLK-IYDHLQLHLPK-QFCQLPYVPFP--REYPAYPSG 83 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~ 83 (395)
+||+|||||++|+++|..|++. |++|+|+|+...+|| .|... .+....+.... .+...-..++. ..+......
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 5999999999999999999999 999999999988874 55321 11111111110 01000011111 011111245
Q ss_pred HHHHHHHHHHHHHc-CCccccCceEEEEEEcC
Q 039923 84 QQFITYMEAYANHF-EIEPLLGQEVQWAKYDA 114 (395)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~~V~~v~~~~ 114 (395)
.++...+.+.+.+. +++++.+++|+.+..++
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecc
Confidence 67777777777774 89999999999998764
No 151
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.96 E-value=2.2e-09 Score=104.07 Aligned_cols=60 Identities=13% Similarity=0.006 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc------EEEEeCEEEEeeCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE------YEFMCRWLIVATGENE 141 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~------~~~~~d~lVlAtG~~~ 141 (395)
.....+...+...+.+.|++++.+++|+++...++ +.+.|++.+ .++.++.||+|+|.|+
T Consensus 167 vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g-~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARGAVALNYMKVESFIYDQG-KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-eEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 34567778888888899999999999999988752 334455542 5899999999999765
No 152
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.96 E-value=7.2e-09 Score=102.34 Aligned_cols=134 Identities=19% Similarity=0.158 Sum_probs=86.2
Q ss_pred CCCeEEECCChHHHHHHHHHHH-----cCCCEEEEecCCCccccccc------------------------CCcCceeee
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-----RGVPSLIIEKESCLASLWKL------------------------KIYDHLQLH 60 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-----~g~~v~lie~~~~~~g~~~~------------------------~~~~~~~~~ 60 (395)
.+||+||||||+|+++|..|++ .|++|+|||+.+.....-+. ..+..+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 4799999999999999999999 99999999997543210000 001111110
Q ss_pred cCC---ccc---cCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHcC---CccccCceEEEEEEcC------CCCcEEEEE
Q 039923 61 LPK---QFC---QLPYV--PFPREYPAYPSGQQFITYMEAYANHFE---IEPLLGQEVQWAKYDA------AMGHWRVKT 123 (395)
Q Consensus 61 ~~~---~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~V~~v~~~~------~~~~~~v~~ 123 (395)
.+. ... .++.. ..........++..+.+.+.+.+.+.+ ++++++++|++++.++ +...+++++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 000 000 00000 000011123678899999999998887 8999999999998865 123455543
Q ss_pred c-------------------------------------------c--EEEEeCEEEEeeCCCCCC
Q 039923 124 H-------------------------------------------E--YEFMCRWLIVATGENEVP 143 (395)
Q Consensus 124 ~-------------------------------------------~--~~~~~d~lVlAtG~~~~~ 143 (395)
. + +++++|+||.|+|.+|..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~V 232 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWV 232 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHH
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHH
Confidence 2 2 579999999999976643
No 153
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.95 E-value=4.1e-09 Score=100.92 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGENEV 142 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~~~~ 142 (395)
....+...+.+.+.+.|++++.+++|+++...+ +.|.|++. + .++.++.||+|+|.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 466788888888899999999999999998876 66777762 3 38999999999998653
No 154
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.94 E-value=1e-09 Score=96.64 Aligned_cols=49 Identities=27% Similarity=0.250 Sum_probs=41.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCce
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHL 57 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~ 57 (395)
|++||+||||||+|++||+.|+++|++|+||||.+.+||.......++.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~ 49 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAG 49 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCc
Confidence 4689999999999999999999999999999999999987654434333
No 155
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.94 E-value=6.6e-10 Score=103.55 Aligned_cols=58 Identities=16% Similarity=0.051 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEE---------EEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQ---------WAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~---------~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~ 141 (395)
....+...+.+.+.+.|++++.+++|+ ++...+ +.+.|++++.++.+|.||+|+|.++
T Consensus 170 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 170 RPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQIVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp CHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeEEEEECCcEEECCEEEECCCccH
Confidence 446688888888888899999999998 776554 4455666667899999999999764
No 156
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.93 E-value=3e-09 Score=101.32 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCC
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGE 139 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~ 139 (395)
+.+.+.+.+.+.|++++++++|++++..++ +.|.|++++.++.||.||+|++.
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAE-GRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGG-GCEEEECSSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-ceEEEEECCeEEEcCEEEECCCH
Confidence 444445555566889999999999998762 33888877788999999999985
No 157
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.92 E-value=1.1e-08 Score=98.26 Aligned_cols=57 Identities=14% Similarity=0.064 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--cc--EEEEeC-EEEEeeCCCC
Q 039923 85 QFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HE--YEFMCR-WLIVATGENE 141 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~--~~~~~d-~lVlAtG~~~ 141 (395)
.+...+.+.+++.+++++++++|+++..+++.+..-|.. .+ .++.++ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788889999999999999999999998874323222333 33 479995 9999999765
No 158
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.92 E-value=7.7e-09 Score=97.16 Aligned_cols=39 Identities=33% Similarity=0.422 Sum_probs=36.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL 48 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~ 48 (395)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 369999999999999999999999999999998888773
No 159
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.91 E-value=7e-09 Score=100.46 Aligned_cols=61 Identities=13% Similarity=0.149 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHHc-CCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC
Q 039923 81 PSGQQFITYMEAYANHF-EIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV 142 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~ 142 (395)
..+..+.+.+.+.+.+. |++++++ +|+.++..++...+.|++.+ +++.+|.||+|+|.++.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 57788999999999998 9999999 99999886533335677765 68999999999996553
No 160
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.90 E-value=4.9e-09 Score=101.04 Aligned_cols=61 Identities=11% Similarity=0.118 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCC
Q 039923 81 PSGQQFITYMEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEV 142 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~ 142 (395)
..+..+...+.+.+.+ .|++++.+ +|++++.+++...+.|++.+ .++.+|+||.|+|.++.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 5678899999999998 89999888 69999886532334566655 67999999999997654
No 161
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.89 E-value=7.9e-09 Score=105.07 Aligned_cols=59 Identities=8% Similarity=-0.052 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENE 141 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~ 141 (395)
....+...+.+.+.+.|++++.+++|++++..++ +.+.|.+++.++.+|.||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~-~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGG-RVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETTEEEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCC-EEEEEEECCcEEECCEEEECCccch
Confidence 5567888888999999999999999999988652 3345777777899999999999865
No 162
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.88 E-value=2.4e-08 Score=97.05 Aligned_cols=133 Identities=20% Similarity=0.157 Sum_probs=83.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC--Cc----Cce----ee-ecCCcc-------------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK--IY----DHL----QL-HLPKQF------------- 65 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~--~~----~~~----~~-~~~~~~------------- 65 (395)
.+||+|||+|++|+++|..|++.|++|+|+|+.+.++|..... .+ ..+ .+ ..+..+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4799999999999999999999999999999998777632110 00 000 00 000000
Q ss_pred -----------------c---cCCC--------CCCCCCC---CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcC
Q 039923 66 -----------------C---QLPY--------VPFPREY---PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDA 114 (395)
Q Consensus 66 -----------------~---~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~ 114 (395)
+ ..++ ..++... ........+...+.+.+.+.+++++++++|+++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 0 0000 0000000 0012356788999999999999999999999997654
Q ss_pred CCCcEEEEE---cc--EEEEeCEEEEeeCCCCC
Q 039923 115 AMGHWRVKT---HE--YEFMCRWLIVATGENEV 142 (395)
Q Consensus 115 ~~~~~~v~~---~~--~~~~~d~lVlAtG~~~~ 142 (395)
+.+.+-|.. ++ .++.++.||+|||.++.
T Consensus 286 ~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 123322333 23 47999999999996543
No 163
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.87 E-value=2.2e-09 Score=102.05 Aligned_cols=39 Identities=26% Similarity=0.356 Sum_probs=36.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC------CCEEEEecCCCcccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG------VPSLIIEKESCLASL 48 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g------~~v~lie~~~~~~g~ 48 (395)
++||+|||||++|+++|++|++.| ++|+|+|+.+.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 579999999999999999999999 999999999888873
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.85 E-value=1.4e-08 Score=95.98 Aligned_cols=99 Identities=18% Similarity=0.187 Sum_probs=80.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||++|+.+|..|.+.|.+|+++|+.+.+. + ....++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHH
Confidence 3689999999999999999999999999999976321 0 012567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++.+ .++.+|.||+|+|. .|..
T Consensus 214 l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~~D~vv~A~G~--~p~~ 266 (455)
T 2yqu_A 214 AERVFKKQGLTIRTGVRVTAVVPEA--KGARVELEGGEVLEADRVLVAVGR--RPYT 266 (455)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETTSCEEEESEEEECSCE--EECC
T ss_pred HHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECCCeEEEcCEEEECcCC--CcCC
Confidence 8888888899999999999998866 556677655 78999999999994 4544
No 165
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.82 E-value=2.4e-08 Score=92.26 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=79.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++|+.+.+.. .....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------------------------~~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP--------------------------------GLLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh--------------------------------cccCHHHHHH
Confidence 47899999999999999999999999999999763221 0112567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++.+ +++.+|.||+|+|.
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAG--EGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEET--TEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecC--CEEEEEECCCCEEECCEEEECcCC
Confidence 8888888899999999999998765 556677766 78999999999994
No 166
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.81 E-value=1e-08 Score=96.86 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=80.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..++++|||||++|+.+|..|.+.|.+|+++|+.+.+... ....++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------YLDKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TCCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------cCCHHHHH
Confidence 3578999999999999999999999999999997643210 01256788
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVLP 146 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~p 146 (395)
.+.+.+++.|++++.+++|++++..+ +.+.+.+++.++.+|.||+|+| .+|..+
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~v~~v~~~~~~i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGDG--RVQKVVTDKNAYDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECSS--BCCEEEESSCEEECSEEEECSC--EEESCG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEccC--cEEEEEECCCEEECCEEEECcC--CCCChH
Confidence 88888888999999999999998653 3334666667899999999999 455443
No 167
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.79 E-value=8.9e-10 Score=101.85 Aligned_cols=119 Identities=17% Similarity=0.055 Sum_probs=76.4
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCc---ccc--cccCCc----------Cc-eee---ec-CCccccC
Q 039923 11 PGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCL---ASL--WKLKIY----------DH-LQL---HL-PKQFCQL 68 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~---~g~--~~~~~~----------~~-~~~---~~-~~~~~~~ 68 (395)
.||+|||||++|+++|..|++. |++|+|+|+.+.+ |.. +..... .. +.. .. ...+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3799999999999999999999 9999999998765 221 000000 00 000 00 000000
Q ss_pred CCCCCCC--CCC-CCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCC
Q 039923 69 PYVPFPR--EYP-AYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEV 142 (395)
Q Consensus 69 ~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~ 142 (395)
....+.. ... ..+.+.++.+.+.+.+.+.+++++++++|++++... .+.+|.||.|+|.++.
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~------------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGELP------------LADYDLVVLANGVNHK 144 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGCC------------GGGCSEEEECCGGGGG
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhcc------------cccCCEEEECCCCCch
Confidence 0000000 101 135788999999999999899999999887764321 2579999999997665
No 168
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.78 E-value=1.3e-08 Score=96.25 Aligned_cols=61 Identities=15% Similarity=0.108 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHHcCCccccCceEEEEEEc--------------CCCCcEEEEEccEEE--EeCEEEEeeCCCC
Q 039923 81 PSGQQFITYMEAYANHFEIEPLLGQEVQWAKYD--------------AAMGHWRVKTHEYEF--MCRWLIVATGENE 141 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~--------------~~~~~~~v~~~~~~~--~~d~lVlAtG~~~ 141 (395)
.....+...+.+.+++.|++++.+++|++++.. ++++.+.|.+++.++ .+|.||+|+|.++
T Consensus 178 ~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 178 LDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECCGGGH
T ss_pred EcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECCCcCH
Confidence 345578888888888999999999999999872 222334577766678 9999999999764
No 169
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.76 E-value=3.7e-08 Score=94.89 Aligned_cols=39 Identities=31% Similarity=0.487 Sum_probs=36.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL 48 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~ 48 (395)
++||+|||||++|++||..|++.|++|+|+|+++.+||.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 479999999999999999999999999999999999884
No 170
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.75 E-value=3.9e-08 Score=93.19 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=80.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP---------------------------------QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999764320 112567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----cE--EEEeCEEEEeeCCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----EY--EFMCRWLIVATGENEVPVLP 146 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~~--~~~~d~lVlAtG~~~~~~~p 146 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++. ++ ++.+|.||+|+| ..|..+
T Consensus 216 l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 216 LRRALEKEGIRVRTKTKAVGYEKKK--DGLHVRLEPAEGGEGEEVVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTCCSCEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHhcCCEEEcCCEEEEEEEeC--CEEEEEEeecCCCceeEEEcCEEEECCC--cccCCC
Confidence 8888888999999999999998765 45556653 43 899999999999 455543
No 171
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.75 E-value=5.9e-08 Score=92.08 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=79.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 4689999999999999999999999999999876321 1 12567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..+ +.+.+.+++.++.+|.||+|+|.
T Consensus 222 l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 222 VTAAFRAEGIEVLEHTQASQVAHMD--GEFVLTTTHGELRADKLLVATGR 269 (467)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEEET--TEEEEEETTEEEEESEEEECSCE
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEECCcEEEcCEEEECCCC
Confidence 8888889999999999999998765 56667777788999999999994
No 172
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=5.6e-08 Score=91.93 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=79.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++|+.+.+. + ....++.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------S--GFEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4789999999999999999999999999999976432 0 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc---c-EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH---E-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~---~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++. + .++.+|.||+|+| .+|..
T Consensus 217 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~g~~~~~~~D~vv~a~G--~~p~~ 272 (455)
T 1ebd_A 217 IKKRLKKKGVEVVTNALAKGAEERE--DGVTVTYEANGETKTIDADYVLVTVG--RRPNT 272 (455)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEETTEEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEEeCCceeEEEcCEEEECcC--CCccc
Confidence 8888888999999999999998765 44556653 3 6899999999999 45543
No 173
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.74 E-value=5.9e-08 Score=92.38 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=80.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------------------------------SMDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 47899999999999999999999999999999864321 012567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc-----c-EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH-----E-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~-----~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..++.+.+.+++. + .++.+|.||+|+| .+|..
T Consensus 230 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G--~~p~~ 289 (478)
T 1v59_A 230 TQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVG--RRPYI 289 (478)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCC--CCcCC
Confidence 88888999999999999999987311245556654 3 6899999999999 45544
No 174
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.73 E-value=4.1e-08 Score=95.31 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE----cc--EEEEeCEEEEeeCCCC
Q 039923 82 SGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT----HE--YEFMCRWLIVATGENE 141 (395)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~----~~--~~~~~d~lVlAtG~~~ 141 (395)
....+...+...+.+.|++++.+++|+++...++ +.+.|++ .+ .++.++.||+|+|.|+
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~-~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGD-QIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETT-EEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCC-EEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 3455666677778888999999999999988752 3344553 23 4799999999999865
No 175
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.73 E-value=6e-08 Score=91.55 Aligned_cols=100 Identities=14% Similarity=0.088 Sum_probs=80.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP---------------------------------SFDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh---------------------------------hhhHHHHHH
Confidence 46899999999999999999999999999998763210 012467778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..++ +.+.+++.+ +++.+|.||+|+| .+|..
T Consensus 214 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~g~~i~~D~vv~a~G--~~p~~ 267 (450)
T 1ges_A 214 LVEVMNAEGPQLHTNAIPKAVVKNTD-GSLTLELEDGRSETVDCLIWAIG--REPAN 267 (450)
T ss_dssp HHHHHHHHSCEEECSCCEEEEEECTT-SCEEEEETTSCEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCC-cEEEEEECCCcEEEcCEEEECCC--CCcCC
Confidence 88888888999999999999987642 336677766 6899999999999 45544
No 176
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.73 E-value=6.8e-08 Score=91.49 Aligned_cols=99 Identities=20% Similarity=0.129 Sum_probs=80.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------F--QFDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012466777
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-E-EEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-Y-EFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~-~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++.+ + ++.+|.||+|+| ..|..
T Consensus 213 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~G~~~i~~D~vv~a~G--~~p~~ 266 (463)
T 2r9z_A 213 LAENMHAQGIETHLEFAVAALERDA--QGTTLVAQDGTRLEGFDSVIWAVG--RAPNT 266 (463)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEET--TEEEEEETTCCEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEeCCcEEEEcCEEEECCC--CCcCC
Confidence 8888888899999999999998765 346677766 6 799999999999 45544
No 177
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.70 E-value=5.7e-08 Score=92.48 Aligned_cols=96 Identities=22% Similarity=0.269 Sum_probs=78.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHH
Confidence 357899999999999999999999999999998763321 01256778
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGE 139 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~ 139 (395)
.+.+.+++.|++++.+++|++++..+ +.+.+.+++.++.+|.||+|+|.
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~--~v~~v~~~~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKGNE--RVEAVETDKGTYKADLVLVSVGV 280 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--BEEEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEcCC--cEEEEEECCCEEEcCEEEECcCC
Confidence 88888889999999999999998653 44456666788999999999994
No 178
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.69 E-value=1.8e-07 Score=91.27 Aligned_cols=133 Identities=18% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCccc--ccccCC----c---Ccee------eecCCcc-------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLAS--LWKLKI----Y---DHLQ------LHLPKQF------- 65 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g--~~~~~~----~---~~~~------~~~~~~~------- 65 (395)
.+||||||||++|+++|..|++.| .+|+||||....++ .+.+.. + +.+. +......
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 479999999999999999999999 99999999865432 111100 0 0000 0000000
Q ss_pred ---------------ccCCCCCCCC------CCCC-------C---CCHHHHHHHHHHHHHHcC-CccccCceEEEEEEc
Q 039923 66 ---------------CQLPYVPFPR------EYPA-------Y---PSGQQFITYMEAYANHFE-IEPLLGQEVQWAKYD 113 (395)
Q Consensus 66 ---------------~~~~~~~~~~------~~~~-------~---~~~~~~~~~~~~~~~~~~-~~~~~~~~V~~v~~~ 113 (395)
...++..... ...+ + .....+...+.+.+.+.+ ++++.++.|+.+..+
T Consensus 85 ~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~ 164 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD 164 (602)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe
Confidence 0011100000 0000 0 113577888888888888 899999999999876
Q ss_pred CCCC--cEEEEE-cc-E--EEEeCEEEEeeCCCCCC
Q 039923 114 AAMG--HWRVKT-HE-Y--EFMCRWLIVATGENEVP 143 (395)
Q Consensus 114 ~~~~--~~~v~~-~~-~--~~~~d~lVlAtG~~~~~ 143 (395)
++ . .+.+.. .+ + .+.++.||+|||.++..
T Consensus 165 ~g-~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 165 DG-HVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp TT-EEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred CC-EEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 52 2 122221 33 3 79999999999976544
No 179
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.69 E-value=1.2e-07 Score=89.60 Aligned_cols=100 Identities=19% Similarity=0.177 Sum_probs=81.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------------------K-YFDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------------------c-cCCHHHHHH
Confidence 46899999999999999999999999999999763310 0 012677888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +.+.+.+++.++.+|.||+|+| .+|..
T Consensus 195 l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g~i~aD~Vv~A~G--~~p~~ 246 (452)
T 3oc4_A 195 VQKSLEKQAVIFHFEETVLGIEETA--NGIVLETSEQEISCDSGIFALN--LHPQL 246 (452)
T ss_dssp HHHHHHTTTEEEEETCCEEEEEECS--SCEEEEESSCEEEESEEEECSC--CBCCC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEccC--CeEEEEECCCEEEeCEEEECcC--CCCCh
Confidence 8888899999999999999998755 4456777767899999999999 44544
No 180
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.69 E-value=7.5e-08 Score=91.10 Aligned_cols=98 Identities=16% Similarity=0.214 Sum_probs=77.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP---------------------------------TYDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999864320 012567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc-c--EEEEeCEEEEeeCCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH-E--YEFMCRWLIVATGENEVPVLP 146 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~-~--~~~~~d~lVlAtG~~~~~~~p 146 (395)
+.+.+++.|++++.+++|++++. + + +.++.+ + .++.+|.||+|+| .+|..+
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~v~~~~G~~~~i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 218 VAESLKKLGIALHLGHSVEGYEN-G--C-LLANDGKGGQLRLEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp HHHHHHHHTCEEETTCEEEEEET-T--E-EEEECSSSCCCEECCSCEEECCC--EEECCS
T ss_pred HHHHHHHCCCEEEECCEEEEEEe-C--C-EEEEECCCceEEEECCEEEECcC--CCcCCC
Confidence 88888888999999999999986 3 3 555533 3 5899999999999 455543
No 181
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.69 E-value=1.2e-07 Score=90.91 Aligned_cols=98 Identities=14% Similarity=0.065 Sum_probs=82.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+..|..+.+.|.+|+|+++...+. ....++.+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~----------------------------------~~D~ei~~~ 268 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR----------------------------------GFDQQCAVK 268 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc----------------------------------ccchhHHHH
Confidence 4789999999999999999999999999998754221 123678888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
+...+++.++.++.++.+..++..+ +.+.+.+.+ .++.+|.|++|+| -+|+.
T Consensus 269 l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~vLvAvG--R~Pnt 321 (542)
T 4b1b_A 269 VKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDKTSELYDTVLYAIG--RKGDI 321 (542)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTSCEEEESEEEECSC--EEESC
T ss_pred HHHHHHhhcceeecceEEEEEEecC--CeEEEEEcCCCeEEEEEEEEccc--ccCCc
Confidence 8999999999999999999999887 667777766 7889999999999 45554
No 182
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.68 E-value=1.3e-07 Score=88.37 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=79.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA--------------------------------RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh--------------------------------hhcCHHHHHH
Confidence 46899999999999999999999999999999763310 0122677888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..++ +...|.+.+ +++.+|.||+|+|.
T Consensus 200 l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 200 YQAEHRAHGVDLRTGAAMDCIEGDGT-KVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEESSS-BEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHhCCCEEEECCEEEEEEecCC-cEEEEEeCCCCEEEcCEEEECCCC
Confidence 88889999999999999999987652 333567765 78999999999994
No 183
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=1.9e-07 Score=89.36 Aligned_cols=100 Identities=16% Similarity=0.135 Sum_probs=80.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR---------------------------------KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc---------------------------------ccchhhHHH
Confidence 46899999999999999999999999999999763310 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EE-EEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YE-FMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~-~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..++ +.+.+++++ ++ +.+|.||+|+| .+|..
T Consensus 223 l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINIVTFADVVEIKKVSD-KNLSIHLSDGRIYEHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESST-TCEEEEETTSCEEEEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCC-ceEEEEECCCcEEEECCEEEECCC--CCcCC
Confidence 88888899999999999999987642 335677765 55 99999999999 45544
No 184
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.66 E-value=2.1e-07 Score=90.57 Aligned_cols=133 Identities=15% Similarity=0.109 Sum_probs=81.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccc-c-cccC-------C--cCceeee------cCCcc-------
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLAS-L-WKLK-------I--YDHLQLH------LPKQF------- 65 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g-~-~~~~-------~--~~~~~~~------~~~~~------- 65 (395)
.+||||||||++|+++|+.|++.|.+|+|+||....+| + +.+. . .+..... .....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 86 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 47999999999999999999999999999999875532 1 1110 0 0000000 00000
Q ss_pred ---------------ccCCCCCCCC------CCCCC-----------------CCHHHHHHHHHHHHHHcCCccccCceE
Q 039923 66 ---------------CQLPYVPFPR------EYPAY-----------------PSGQQFITYMEAYANHFEIEPLLGQEV 107 (395)
Q Consensus 66 ---------------~~~~~~~~~~------~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~V 107 (395)
...++..... ..... .....+...+.+.+.+.+++++.+++|
T Consensus 87 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v 166 (588)
T 2wdq_A 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYA 166 (588)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEE
Confidence 0011100000 00000 013577888888888889999999999
Q ss_pred EEEEEcCCCCcEEEEE---cc---EEEEeCEEEEeeCCCCC
Q 039923 108 QWAKYDAAMGHWRVKT---HE---YEFMCRWLIVATGENEV 142 (395)
Q Consensus 108 ~~v~~~~~~~~~~v~~---~~---~~~~~d~lVlAtG~~~~ 142 (395)
+.+..+++....-+.. .+ ..+.++.||+|||.++.
T Consensus 167 ~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 167 LDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred EEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 9998753223322332 22 47999999999997554
No 185
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.65 E-value=1.8e-07 Score=89.54 Aligned_cols=95 Identities=13% Similarity=0.162 Sum_probs=79.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------P--YEDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------C--CSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4789999999999999999999999999999876432 0 012567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++.+ +++.+|.||+|+|.
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTG--AGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECS--SSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--CEEEEEECCCcEEEcCEEEECCCC
Confidence 8888899999999999999998765 446676665 78999999999994
No 186
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.65 E-value=7.7e-08 Score=91.83 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=78.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .....++.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA--------------------------------GYYDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh--------------------------------hHHHHHHHHH
Confidence 47899999999999999999999999999999763210 0112567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++.++ +...+.++++++.+|.||+|+| .+|..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~~~--~v~~v~~~g~~i~~D~Vi~a~G--~~p~~ 293 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAGNG--KVEKIITDKNEYDVDMVILAVG--FRPNT 293 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEECSS--SCCEEEESSCEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEcCC--cEEEEEECCcEEECCEEEECCC--CCcCh
Confidence 8888888999999999999998632 2223555668899999999999 44543
No 187
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.64 E-value=1.7e-07 Score=87.18 Aligned_cols=97 Identities=18% Similarity=0.215 Sum_probs=78.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~--------------------------------~~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA--------------------------------RVVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh--------------------------------hccCHHHHHH
Confidence 46899999999999999999999999999998763210 0122577888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..++ +...|++.+ +++.+|.||+|+|.
T Consensus 190 l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 190 FHDRHSGAGIRMHYGVRATEIAAEGD-RVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEECCEEEEEEecCC-cEEEEEeCCCCEEEcCEEEECcCC
Confidence 88889999999999999999987652 333466766 78999999999994
No 188
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.64 E-value=1.5e-07 Score=89.53 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=79.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG--------------------------------VGIDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC--------------------------------SSCCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC--------------------------------cccCHHHHHH
Confidence 36899999999999999999999999999999764320 0012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE-----cc-EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT-----HE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~-----~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..++ +.+.++. .+ .++.+|.||+|+| .+|..
T Consensus 226 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~~~~~~i~~D~vv~a~G--~~p~~ 284 (474)
T 1zmd_A 226 FQRILQKQGFKFKLNTKVTGATKKSD-GKIDVSIEAASGGKAEVITCDVLLVCIG--RRPFT 284 (474)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTT-SCEEEEEEETTSCCCEEEEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEEEeCceEEEEEEcCC-ceEEEEEEecCCCCceEEEcCEEEECcC--CCcCC
Confidence 88888999999999999999987652 2255653 23 7899999999999 44443
No 189
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.63 E-value=5.7e-08 Score=90.56 Aligned_cols=96 Identities=18% Similarity=0.240 Sum_probs=78.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 478999999999999999999999999999997632100 011567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..+ ....|++.+ +++.+|.||+|+|.
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECCCCEEEcCEEEEeeCC
Confidence 8888888899999999999998754 444577765 78999999999994
No 190
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.63 E-value=1.1e-07 Score=89.75 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=78.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY--------------------------------KYFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh--------------------------------hhhhhhHHHH
Confidence 46899999999999999999999999999998763210 0112567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEE-EEEccEEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VKTHEYEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~~~~~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +.+. +.++++++.+|.||+|+| ..|..
T Consensus 197 l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G--~~p~~ 249 (452)
T 2cdu_A 197 LAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIG--FRPNT 249 (452)
T ss_dssp HHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcC--CCCCH
Confidence 8888899999999999999998644 4333 455558899999999999 44543
No 191
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.63 E-value=2.1e-07 Score=87.22 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=77.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE--------------------------------RVTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc--------------------------------chhhHHHHHH
Confidence 47899999999999999999999999999998763210 0112567777
Q ss_pred HHHHHHHcCCccccCceEEEEEE--cCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKY--DAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~--~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++. .+ .....+++.+ +++.+|.||+|+|.
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCCCCEEEcCEEEECCCC
Confidence 88888888999999999999986 33 1333566665 78999999999994
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.63 E-value=2.2e-07 Score=88.02 Aligned_cols=99 Identities=20% Similarity=0.219 Sum_probs=79.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------P--NEDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999976432 0 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--c--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--E--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++. + +++.+|.||+|+| ..|..
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~g~~~~~~~D~vv~a~G--~~p~~ 273 (464)
T 2a8x_A 218 IEKQFKKLGVTILTATKVESIADGG--SQVTVTVTKDGVAQELKAEKVLQAIG--FAPNV 273 (464)
T ss_dssp HHHHHHHHTCEEECSCEEEEEEECS--SCEEEEEESSSCEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEcC--CeEEEEEEcCCceEEEEcCEEEECCC--CCccC
Confidence 8888888899999999999998765 44556653 3 6899999999999 44543
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.63 E-value=1.8e-07 Score=87.04 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=75.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS--------------------------------RAAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc--------------------------------cccCHHHHHH
Confidence 47899999999999999999999999999999864320 0012567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++ + + .|++.+ +++.+|.||+|+|.
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~--~--~--~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV--D--G--VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE--T--T--EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE--C--C--EEEECCCCEEEcCEEEECcCC
Confidence 8888889999999999999998 3 3 366655 78999999999994
No 194
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.62 E-value=7.3e-08 Score=92.82 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=33.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLAS 47 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g 47 (395)
..+||+|||||++|+++|+.|++ |.+|+|+||....+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 35899999999999999999999 999999999876543
No 195
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.62 E-value=2.5e-07 Score=89.01 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=78.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITYM 90 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
++++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------L--IKDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T--CCSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------c--cccHHHHHHH
Confidence 789999999999999999999999999999976321 0 0125678888
Q ss_pred HHHHHHcCCccccCceEEEEEEcCCCCc---EEEEEcc-E-EEEeCEEEEeeCC
Q 039923 91 EAYANHFEIEPLLGQEVQWAKYDAAMGH---WRVKTHE-Y-EFMCRWLIVATGE 139 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~~V~~v~~~~~~~~---~~v~~~~-~-~~~~d~lVlAtG~ 139 (395)
.+.+++.|++++.+++|++++..++ +. +.|++++ + ++.+|.||+|+|.
T Consensus 262 ~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 262 LDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 8888999999999999999987542 32 6677766 4 8999999999994
No 196
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.61 E-value=2.2e-07 Score=88.44 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=79.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR---------------------------------KFDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999763210 012567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..++.....+++++ +++.+|.||+|+|. +|..
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~--~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR--KSHL 287 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE--EECC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC--CCcc
Confidence 888888889999999999999876432235676654 68999999999994 4443
No 197
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.60 E-value=2e-07 Score=88.91 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=80.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER---GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~---g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.++++|||||+.|+.+|..|.+. |.+|+++++.+.+.. ....++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR---------------------------------GFDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST---------------------------------TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc---------------------------------ccCHHH
Confidence 46899999999999999999999 999999999864320 012567
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
.+.+.+.+++.|++++.+++|++++..++ +.+.+++.+ +++.+|.||+|+| ..|..
T Consensus 234 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~~~~G~~i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 234 RKQLTEQLRANGINVRTHENPAKVTKNAD-GTRHVVFESGAEADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp HHHHHHHHHHTTEEEEETCCEEEEEECTT-SCEEEEETTSCEEEESEEEECSC--EEESC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEEECCCcEEEcCEEEEccC--CCcCc
Confidence 78888888899999999999999987652 346677766 6899999999999 44443
No 198
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.60 E-value=3e-07 Score=87.27 Aligned_cols=99 Identities=14% Similarity=0.203 Sum_probs=78.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP---------------------------------TLDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc---------------------------------cCCHHHHHH
Confidence 46899999999999999999999999999999764320 012567788
Q ss_pred HHHHH-HHcCCccccCceEEEEEEcCCCCcEEEEEc---c--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYA-NHFEIEPLLGQEVQWAKYDAAMGHWRVKTH---E--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~-~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~---~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+ ++.|++++.+++|++++..+ +.+.+++. + .++.+|.||+|+|. .|..
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~i~~D~vv~a~G~--~p~~ 278 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNG--DSVSLEVEGKNGKRETVTCEALLVSVGR--RPFT 278 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECS--SSEEEEEECC---EEEEEESEEEECSCE--EECC
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcC--CeEEEEEEcCCCceEEEECCEEEECCCc--ccCC
Confidence 88888 88899999999999998765 44556653 3 68999999999994 4443
No 199
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.60 E-value=2.5e-07 Score=87.86 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=78.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER-GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
.++++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. .....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP--------------------------------GFTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST--------------------------------TTSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc--------------------------------cccCHHHHH
Confidence 46899999999999999999999 999999998763210 011257788
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
.+.+.+++.|++++.+++|++++..+ +.+.+.+.+ +++.+|.||+|+|.
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCCCEEEcCEEEECCCC
Confidence 88888899999999999999998755 555566655 78999999999994
No 200
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.60 E-value=3.1e-07 Score=87.69 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=80.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER---GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQF 86 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~---g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.++++|||||+.|+.+|..|.+. |.+|+++++.+.+.. ....++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR---------------------------------GFDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT---------------------------------TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc---------------------------------ccCHHH
Confidence 36899999999999999999999 999999998763210 012567
Q ss_pred HHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCC
Q 039923 87 ITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~ 145 (395)
.+.+.+.+++.|++++.+++|++++..++ +.+.+++.+ +++.+|.||+|+|. +|..
T Consensus 238 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~~~~G~~i~~D~vv~a~G~--~p~~ 294 (495)
T 2wpf_A 238 REEVTKQLTANGIEIMTNENPAKVSLNTD-GSKHVTFESGKTLDVDVVMMAIGR--IPRT 294 (495)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECTT-SCEEEEETTSCEEEESEEEECSCE--EECC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceEEEEECCCcEEEcCEEEECCCC--cccc
Confidence 78888888889999999999999987642 345677766 68999999999994 4443
No 201
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.60 E-value=3.2e-07 Score=87.58 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=79.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------------------------GMDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------------------------cCCHHHHHH
Confidence 46899999999999999999999999999998764320 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|.+++..+ +.+.+++. + .++.+|.||+|+| ..|..
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~Vi~a~G--~~p~~ 302 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKSG--DGAKVTFEPVKGGEATTLDAEVVLIATG--RKPST 302 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTSCCCEEEEESEEEECCC--CEECC
T ss_pred HHHHHHhCCCEEEECCeEEEEEEeC--CEEEEEEEecCCCceEEEEcCEEEEeeC--CccCC
Confidence 8888888999999999999998876 55556554 3 6899999999999 44443
No 202
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.60 E-value=3.4e-07 Score=87.34 Aligned_cols=98 Identities=16% Similarity=0.131 Sum_probs=78.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN---------------------------------LQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT---------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------cCCHHHHHH
Confidence 47899999999999999999999999999999864321 112567777
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc---c--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH---E--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~---~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++. ++++.+++|++++..+ +.+.+++. + .++.+|.||+|+| ..|..
T Consensus 221 l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~v~~~~~~G~~~~i~~D~Vi~a~G--~~p~~ 276 (492)
T 3ic9_A 221 AEKTFNEE-FYFDAKARVISTIEKE--DAVEVIYFDKSGQKTTESFQYVLAATG--RKANV 276 (492)
T ss_dssp HHHHHHTT-SEEETTCEEEEEEECS--SSEEEEEECTTCCEEEEEESEEEECSC--CEESC
T ss_pred HHHHHhhC-cEEEECCEEEEEEEcC--CEEEEEEEeCCCceEEEECCEEEEeeC--CccCC
Confidence 77877776 9999999999998876 45566653 4 6899999999999 45544
No 203
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.59 E-value=2.7e-07 Score=89.96 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=80.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc--cccCC---------cCceeee------------cCC---
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL--WKLKI---------YDHLQLH------------LPK--- 63 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~--~~~~~---------~~~~~~~------------~~~--- 63 (395)
.+||||||||++|+++|+.|++.|.+|+|+||....++. +.+.. .+..... .+.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 379999999999999999999999999999998644321 11100 0000000 000
Q ss_pred -----------cc--ccCCCCCCCCC------CCC---------------C---CCHHHHHHHHHHHHHHcCCccccCce
Q 039923 64 -----------QF--CQLPYVPFPRE------YPA---------------Y---PSGQQFITYMEAYANHFEIEPLLGQE 106 (395)
Q Consensus 64 -----------~~--~~~~~~~~~~~------~~~---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (395)
.+ ...++...... ..+ + .....+...+.+.+.+.+++++.++.
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~~ 177 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYF 177 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEceE
Confidence 00 00111000000 000 0 12346788888888888999999999
Q ss_pred EEEEEEcCCCCcEEEEE---cc---EEEEeCEEEEeeCCCCC
Q 039923 107 VQWAKYDAAMGHWRVKT---HE---YEFMCRWLIVATGENEV 142 (395)
Q Consensus 107 V~~v~~~~~~~~~~v~~---~~---~~~~~d~lVlAtG~~~~ 142 (395)
|+.+..+++ ...-+.. .+ ..+.++.||+|||.++.
T Consensus 178 v~~Li~~~g-~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 178 ALDLLMENG-ECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp EEEEEEETT-EEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred EEEEEEECC-EEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 999987542 2221322 22 47999999999997654
No 204
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.58 E-value=1.6e-07 Score=89.36 Aligned_cols=99 Identities=13% Similarity=0.082 Sum_probs=79.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ---------------------------------GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999764320 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc-----cEEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH-----EYEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~-----~~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|.+++..+ +...+++. ++++.+|.||+|+| .+|..
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~~g~~~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEGANAPKEPQRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEET--TEEEEEEESSSCCSSCEEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEeccCCCceEEEcCEEEECcC--CCcCC
Confidence 8888888999999999999998765 44556654 35789999999999 45543
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=1.4e-07 Score=86.56 Aligned_cols=89 Identities=20% Similarity=0.208 Sum_probs=73.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITYM 90 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
++++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 689999999999999999999999999999876321 0 125678888
Q ss_pred HHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCC
Q 039923 91 EAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGE 139 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~ 139 (395)
.+.+++.|++++.+++|++++ . .. +++++.++.+|.||+|+|.
T Consensus 190 ~~~l~~~gV~i~~~~~v~~i~--~--~~--v~~~~g~i~~D~vi~a~G~ 232 (367)
T 1xhc_A 190 KDMLEETGVKFFLNSELLEAN--E--EG--VLTNSGFIEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHTTEEEECSCCEEEEC--S--SE--EEETTEEEECSCEEEECCE
T ss_pred HHHHHHCCCEEEcCCEEEEEE--e--eE--EEECCCEEEcCEEEECcCC
Confidence 888889999999999999987 2 22 6666633999999999994
No 206
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=1.9e-07 Score=88.71 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=79.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------------------------------~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP---------------------------------TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------------------------------cccHHHHHH
Confidence 47899999999999999999999999999999864320 112577888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|.+++..+ +.+.+++. + .++.+|.||+|+|. .|..
T Consensus 224 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~~~~D~vv~a~G~--~p~~ 281 (470)
T 1dxl_A 224 FQRSLEKQGMKFKLKTKVVGVDTSG--DGVKLTVEPSAGGEQTIIEADVVLVSAGR--TPFT 281 (470)
T ss_dssp HHHHHHHSSCCEECSEEEEEEECSS--SSEEEEEEESSSCCCEEEEESEEECCCCE--EECC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEEcC--CeEEEEEEecCCCcceEEECCEEEECCCC--CcCC
Confidence 8888899999999999999998765 44555543 3 68999999999994 4443
No 207
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.57 E-value=2.5e-07 Score=92.43 Aligned_cols=38 Identities=34% Similarity=0.608 Sum_probs=36.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLAS 47 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g 47 (395)
.+||+|||||++|+++|..|++.|++|+|+|+...+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999999999999999988887
No 208
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.56 E-value=4.2e-07 Score=86.51 Aligned_cols=101 Identities=20% Similarity=0.096 Sum_probs=79.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR---------------------------------SFDSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999998763210 112567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--------EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE--------YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~--------~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..++...+.+.+.+ .++.+|.||+|+| ..|..
T Consensus 234 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G--~~p~~ 295 (478)
T 3dk9_A 234 CTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIG--RVPNT 295 (478)
T ss_dssp HHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeec--cccCC
Confidence 888888999999999999999876532135566653 6799999999999 44443
No 209
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.56 E-value=4.4e-07 Score=86.48 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=79.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------------------------------~~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR---------------------------------NFDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999998763210 012567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..+ +.+.+++.+ +++.+|.||+|+|.
T Consensus 238 l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 238 LNDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECS--SSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEeeC--CEEEEEECCCcEEEcCEEEEeeCC
Confidence 8888888899999999999998876 556787776 68999999999994
No 210
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.55 E-value=5.1e-08 Score=93.72 Aligned_cols=43 Identities=28% Similarity=0.436 Sum_probs=38.7
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCcccccc
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKER-GVPSLIIEKESCLASLWK 50 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~~~~g~~~ 50 (395)
.+.+||+|||||++||+||++|++. |++|+|+|+.+.+||..+
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 3458999999999999999999985 999999999999999554
No 211
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.55 E-value=4.1e-07 Score=89.53 Aligned_cols=136 Identities=19% Similarity=0.160 Sum_probs=78.9
Q ss_pred CCCeEEECCChHHHHHHHHHH---H-cCCCEEEEecCCCccc-ccccCC------cCcee----eecCCcc---------
Q 039923 10 TPGPVIVGAGPSGLAAAACLK---E-RGVPSLIIEKESCLAS-LWKLKI------YDHLQ----LHLPKQF--------- 65 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~---~-~g~~v~lie~~~~~~g-~~~~~~------~~~~~----~~~~~~~--------- 65 (395)
.+||||||||++|+++|..|+ + .|.+|+|+||....++ .+.... +.... ...+..+
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 479999999999999999999 6 8999999999864321 111100 00000 0000000
Q ss_pred ------------------------ccCCCCCCCCCCCCCC--------CHHHHHHHHHHHHHHc-CC-ccccCceEEEEE
Q 039923 66 ------------------------CQLPYVPFPREYPAYP--------SGQQFITYMEAYANHF-EI-EPLLGQEVQWAK 111 (395)
Q Consensus 66 ------------------------~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~-~~~~~~~V~~v~ 111 (395)
...++.....+ .... ....+...+...+++. ++ +++.++.|+.+.
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g-~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~ 180 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDG-KYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELL 180 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTS-CBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCC-CccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEE
Confidence 00111000000 0000 1234566777777777 99 899999999998
Q ss_pred EcCCC-CcEE-EEE---cc---EEEEeCEEEEeeCCCCCCCCC
Q 039923 112 YDAAM-GHWR-VKT---HE---YEFMCRWLIVATGENEVPVLP 146 (395)
Q Consensus 112 ~~~~~-~~~~-v~~---~~---~~~~~d~lVlAtG~~~~~~~p 146 (395)
.+++. +.+. +.. .+ ..+.++.||+|||.++....|
T Consensus 181 ~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~ 223 (643)
T 1jnr_A 181 KDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRP 223 (643)
T ss_dssp ECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCC
T ss_pred EcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccC
Confidence 76420 1321 221 22 479999999999976654333
No 212
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.55 E-value=5.1e-07 Score=88.69 Aligned_cols=59 Identities=10% Similarity=0.044 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCC--cEEEEE-cc---EEEEeCEEEEeeCCCCC
Q 039923 83 GQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMG--HWRVKT-HE---YEFMCRWLIVATGENEV 142 (395)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~--~~~v~~-~~---~~~~~d~lVlAtG~~~~ 142 (395)
...+...+.+.+.+.+++++.++.|+.+..+++ . ++.+.. .+ ..+.++.||+|||.++.
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g-~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDG-KCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCC-EEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 346778888888888999999999999976542 2 222221 22 46999999999997654
No 213
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.54 E-value=4.7e-07 Score=88.04 Aligned_cols=97 Identities=19% Similarity=0.303 Sum_probs=78.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHH
Confidence 3689999999999999999999999999999976321 0 112567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcC-----------------CCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDA-----------------AMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~-----------------~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++... .++.+.+.+.+ +++.+|.||+|+|.
T Consensus 198 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 8888888999999999999998731 12555666665 78999999999994
No 214
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.52 E-value=6.1e-07 Score=85.34 Aligned_cols=99 Identities=21% Similarity=0.212 Sum_probs=79.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP---------------------------------AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999763310 112567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc----EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE----YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~----~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++|++++..+ +...+++.+ +++.+|.||+|+| ..|..
T Consensus 227 l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~v~~~~~~g~~~~~~D~vi~a~G--~~p~~ 282 (476)
T 3lad_A 227 AQKILTKQGLKILLGARVTGTEVKN--KQVTVKFVDAEGEKSQAFDKLIVAVG--RRPVT 282 (476)
T ss_dssp HHHHHHHTTEEEEETCEEEEEEECS--SCEEEEEESSSEEEEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcC--CEEEEEEEeCCCcEEEECCEEEEeeC--CcccC
Confidence 8888889999999999999998876 445565542 5899999999999 44543
No 215
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.52 E-value=5.4e-07 Score=85.94 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=75.8
Q ss_pred CCCeEEECCChHHHHHHHHHHH----cCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE----RGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQ 85 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~----~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
.++|+|||||+.|+.+|..|.+ .|.+|+++++.+.+.. .....+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~--------------------------------~~l~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG--------------------------------KILPEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT--------------------------------TTSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc--------------------------------ccCCHH
Confidence 4689999999999999999987 4789999998652110 011146
Q ss_pred HHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 86 FITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+.+.+++.|++++.+++|++++..+ +.+.+++.+ +++.+|.||+|+|.
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEET--TEEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeEEEEECCCCEEECCEEEECCCC
Confidence 77778888888899999999999998755 455677766 78999999999994
No 216
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.50 E-value=2.9e-07 Score=90.42 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHc------CCCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER------GVPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~------g~~v~lie~~~~ 44 (395)
.+||||||||++|++||+.|++. |.+|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999998 999999999754
No 217
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.48 E-value=2.1e-07 Score=82.14 Aligned_cols=192 Identities=14% Similarity=0.184 Sum_probs=100.7
Q ss_pred CeEEEECCCcCHHHHHHHHhhC-CCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhh
Q 039923 173 SKVLVVGCGNSGMEISFDLCKN-GAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQ 251 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~-g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (395)
..|+|||+|.+|+.+|..|++. |.+|+++++.+ .+......... .+. ..........+ +..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~-~~gg~~~~~~~--~~~----~~~~~~~~~~~-----------l~~ 101 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV-SPGGGAWLGGQ--LFS----AMIVRKPAHLF-----------LDE 101 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS-SCCTTTTCCST--TCC----CEEEETTTHHH-----------HHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC-CCCCceecCCc--chH----HHHcCcHHHHH-----------HHH
Confidence 4799999999999999999997 99999999986 22110000000 000 00000000000 112
Q ss_pred cCCCCCCCCCCcccCCCCCCcccChhhHhhhhc-CCeEEecC--ccEEe--cC---eEEEe---------CC-----cEe
Q 039923 252 IGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKS-GEIKVVPG--IQKFT--AK---GAEFV---------NR-----TVK 309 (395)
Q Consensus 252 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~--~~---~v~~~---------~g-----~~i 309 (395)
.|+.....+.... ......+...+.+.+.+ .++++..+ |.++. +. ++.+. ++ .++
T Consensus 102 ~G~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i 178 (284)
T 1rp0_A 102 IGVAYDEQDTYVV---VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 178 (284)
T ss_dssp HTCCCEECSSEEE---ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEE
T ss_pred cCCCcccCCCEEE---ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEE
Confidence 2222111000000 00011122233444443 57887765 55553 22 34443 32 579
Q ss_pred cCcEEEEcCCCCCCCCcccccc----cccc-cc-CCCCCCCCC------CCCCCCCCCeEEEEecccc--------cc--
Q 039923 310 EFDSIILATGYRSNVSSWLKEA----SLFN-QK-NNNNPQDSY------PKNWKGKNGVYSVGFARQG--------LL-- 367 (395)
Q Consensus 310 ~~D~vi~atG~~~~~~~~~~~~----~l~~-~~-~~g~~~~~~------~~~~~~~~~iya~Gd~~~~--------~~-- 367 (395)
++|.||.|+|..+....+.... ++.. +. .+|.. .+. ....+..|++|++|++... +.
T Consensus 179 ~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~-~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~ 257 (284)
T 1rp0_A 179 EAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALD-MNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFG 257 (284)
T ss_dssp EEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEEC-HHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCH
T ss_pred ECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCch-hhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHH
Confidence 9999999999988765442222 1000 00 12211 110 0123467999999997622 22
Q ss_pred cchhhHHHHHHHHHhhhcc
Q 039923 368 GISMDAHKVADDIASQWNS 386 (395)
Q Consensus 368 ~a~~~g~~~a~~i~~~~~~ 386 (395)
.+..+|..+|.+|...|+.
T Consensus 258 ~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 258 AMMISGQKAGQLALKALGL 276 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhHHHHHHHHHHHhhh
Confidence 6778999999999999863
No 218
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.48 E-value=3.5e-07 Score=85.85 Aligned_cols=94 Identities=18% Similarity=0.174 Sum_probs=74.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
..+++|||||+.|+.+|..+.+.|.+|+++++.+.+.. ....++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~---------------------------------~~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK---------------------------------LMDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST---------------------------------TSCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc---------------------------------cccchhHHH
Confidence 35899999999999999999999999999999764321 011345666
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPV 144 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~ 144 (395)
+.+..++.+++++.+++|++++... +++.+ +++.+|.|++|+| .+|.
T Consensus 194 ~~~~l~~~gV~i~~~~~v~~~~~~~------v~~~~g~~~~~D~vl~a~G--~~Pn 241 (437)
T 4eqs_A 194 ILDELDKREIPYRLNEEINAINGNE------ITFKSGKVEHYDMIIEGVG--THPN 241 (437)
T ss_dssp HHHHHHHTTCCEEESCCEEEEETTE------EEETTSCEEECSEEEECCC--EEES
T ss_pred HHHHhhccceEEEeccEEEEecCCe------eeecCCeEEeeeeEEEEec--eecC
Confidence 7778888899999999998876432 66666 8899999999999 4444
No 219
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.47 E-value=9.1e-07 Score=84.26 Aligned_cols=95 Identities=23% Similarity=0.191 Sum_probs=75.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++++...+. ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR----------------------------------GFDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc----------------------------------ccCHHHHHH
Confidence 3689999999999999999999999999999843110 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc------EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE------YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~------~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|.+++..++ +.+.+++.+ .++.+|.||+|+|.
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDD-GKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCC-CcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 88888899999999999999987653 334555543 47999999999994
No 220
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.46 E-value=9.1e-07 Score=83.77 Aligned_cols=96 Identities=20% Similarity=0.180 Sum_probs=78.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~---------------------------------~~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS---------------------------------RFDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999998763210 012567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEE-EccEEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVK-THEYEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~-~~~~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++..++ +.+.|+ +++.++.+|.||+|+|.
T Consensus 217 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~g~i~aD~Vv~a~G~ 266 (463)
T 4dna_A 217 LHAAMEEKGIRILCEDIIQSVSADAD-GRRVATTMKHGEIVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-SCEEEEESSSCEEEESEEEECSCE
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-CEEEEEEcCCCeEEeCEEEEeeCc
Confidence 88888999999999999999988653 335677 66633999999999994
No 221
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.45 E-value=7.6e-07 Score=83.98 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=75.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++++|||||+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR--------------------------------RSFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch--------------------------------hhcCHHHHHH
Confidence 46899999999999999999999999999999763321 0012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~ 139 (395)
+.+.+++. ++++.++.|.+++..+ +...+..++.++.+|.||+|+|.
T Consensus 196 l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 196 LEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHTTT-SEEEESCCEEEEECSS--SCCEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEeCCCEEECCEEEEeeCC
Confidence 88888887 9999999999997654 32235556688999999999994
No 222
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.45 E-value=1.2e-06 Score=82.99 Aligned_cols=123 Identities=16% Similarity=0.050 Sum_probs=70.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCcccccccCCcCcee--eecCCc---cccCCCC--------CCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKESCLASLWKLKIYDHLQ--LHLPKQ---FCQLPYV--------PFP 74 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~~~~g~~~~~~~~~~~--~~~~~~---~~~~~~~--------~~~ 74 (395)
.++|+|||||.+|+.+|..|.+. +.+|+++++.+.+-.. ....+. ...|.. +...+.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~----~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA----DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC----CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc----cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 46899999999999999999999 8899999998743110 000000 000000 0000000 000
Q ss_pred CCCCCCCCHHHHHHHH-----HHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc---c---EEEEeCEEEEeeCC
Q 039923 75 REYPAYPSGQQFITYM-----EAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH---E---YEFMCRWLIVATGE 139 (395)
Q Consensus 75 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~---~---~~~~~d~lVlAtG~ 139 (395)
..+. ......+.+.. +....+.+++++.+++|++++..+ +.+.+++. + .++.+|.||+|||.
T Consensus 303 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 303 TNYS-VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp GTSS-CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred cCCC-cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 0000 01111111111 111112588899999999998876 66777765 2 46999999999995
No 223
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.44 E-value=1.9e-06 Score=82.07 Aligned_cols=99 Identities=18% Similarity=0.125 Sum_probs=76.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
..+++|||||+.|+.+|..|.+.|.+|+++++...+. ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR----------------------------------GFDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc----------------------------------cCCHHHHHH
Confidence 4689999999999999999999999999999853111 012567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.+++++.+++|.+++..++ +.+.+++. + .++.+|.||+|+| ..|..
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~~v~~~~~~~g~~~~~~~D~vi~a~G--~~p~~ 289 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPT-NQLQVTWEDHASGKEDTGTFDTVLWAIG--RVPET 289 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEETTTTEEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEeCCCCeeEEEECCEEEEccc--CCccc
Confidence 88888999999999999999987543 44445443 2 3589999999999 44443
No 224
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.44 E-value=1e-06 Score=78.94 Aligned_cols=94 Identities=15% Similarity=0.160 Sum_probs=73.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999875321 11455666
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc-----c--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH-----E--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~-----~--~~~~~d~lVlAtG~ 139 (395)
+.+.+++.+++++.+++|++++.+++ +...|++. + .++.+|.||+|+|.
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGDQM-GVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEECSS-SEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHhcccCCeEEEcCceeEEEEcCCC-ceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 67777778999999999999987652 22223332 2 68999999999994
No 225
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.44 E-value=3e-07 Score=86.03 Aligned_cols=44 Identities=30% Similarity=0.427 Sum_probs=39.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCcccccccC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERG-VPSLIIEKESCLASLWKLK 52 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g-~~v~lie~~~~~~g~~~~~ 52 (395)
..+||+|||||++|++||..|++.| ++|+|+|+.+.+||.....
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~ 49 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSP 49 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccccc
Confidence 3579999999999999999999999 8999999999999965543
No 226
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.40 E-value=1.3e-06 Score=78.85 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=72.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ...+..+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 4689999999999999999999999999999875321 11345666
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE----cc--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT----HE--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~----~~--~~~~~d~lVlAtG~ 139 (395)
+.+.+++.+++++.+++|.+++.++ +...+++ ++ .++.+|.||+|+|.
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGDE--RVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEESS--SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHhccccCCeEEecCCcceeEccCC--CeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 7777777899999999999998743 4223444 23 68999999999994
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.40 E-value=1.1e-06 Score=85.88 Aligned_cols=93 Identities=19% Similarity=0.350 Sum_probs=76.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------P--PIDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012567788
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|++++... .. +++.+ +++.+|.||+|+|.
T Consensus 234 l~~~l~~~GV~i~~~~~v~~i~~~~--~~--v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 234 VHEHMKNHDVELVFEDGVDALEENG--AV--VRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEGGG--TE--EEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHcCCEEEECCeEEEEecCC--CE--EEECCCCEEEcCEEEEccCC
Confidence 8888889999999999999998754 33 55555 78999999999994
No 228
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.35 E-value=3.8e-06 Score=80.63 Aligned_cols=100 Identities=17% Similarity=0.104 Sum_probs=75.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
..+++|||||+.|+.+|..|.+.|.+|+++++...+. ....++.+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR----------------------------------GFDQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc----------------------------------cCCHHHHHH
Confidence 4679999999999999999999999999999852110 012567888
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCC--CCcEEEEE--cc----EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAA--MGHWRVKT--HE----YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~--~~~~~v~~--~~----~~~~~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.|++++.+++++.++..++ .+.+.++. .+ .++.+|.||+|+| ..|..
T Consensus 256 ~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G--~~p~~ 317 (519)
T 3qfa_A 256 IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIG--RDACT 317 (519)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecC--CcccC
Confidence 88888899999999988888876542 13344433 22 3678999999999 45543
No 229
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.35 E-value=3.9e-07 Score=86.69 Aligned_cols=43 Identities=33% Similarity=0.445 Sum_probs=37.0
Q ss_pred CCCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccc
Q 039923 7 RFWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLW 49 (395)
Q Consensus 7 ~~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~ 49 (395)
....+||+|||||++|+++|..|++.|++|+|+|+.+.+||..
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 3446899999999999999999999999999999999999843
No 230
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.34 E-value=5.3e-07 Score=82.87 Aligned_cols=44 Identities=25% Similarity=0.194 Sum_probs=40.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK 52 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~ 52 (395)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 35799999999999999999999999999999999999977653
No 231
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.33 E-value=4.1e-07 Score=87.16 Aligned_cols=42 Identities=33% Similarity=0.387 Sum_probs=38.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL 51 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~ 51 (395)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.+||.+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceee
Confidence 489999999999999999999999999999999999985543
No 232
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.32 E-value=1.7e-06 Score=79.16 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=73.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|++|+.+|..|.+.|.+|+++++.+.+... . + + +.......+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------~---~-------d-~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------D---A-------D-PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------C---C-------C-CCccCCHHHHHH
Confidence 358999999999999999999999999999997633200 0 0 0 011112455667
Q ss_pred HHHHHHHcC-CccccCceEEEEEEcCCCCcEEEEEcc-EEEE-eCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFE-IEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFM-CRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~-~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~-~d~lVlAtG~~~~~~~ 145 (395)
+.+.+++.+ ++++.+++|.+++..+ +.+.+++.+ +.+. +|.+|+|+| ..|..
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~~v~~~~g~~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNN--GQYHISFDSGQSVHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEET--TEEEEEESSSCCEEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecC--CceEEEecCCeEeccCCceEEeec--cCCcc
Confidence 777777776 9999999999997655 555676665 4454 599999999 45544
No 233
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.31 E-value=5.8e-07 Score=84.82 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=39.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL 51 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~ 51 (395)
..+||+|||||++|+++|..|++.|++|+++|+++.+||.++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 3489999999999999999999999999999999999996655
No 234
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.30 E-value=5.6e-07 Score=82.04 Aligned_cols=44 Identities=30% Similarity=0.292 Sum_probs=40.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecC-CCcccccccC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKE-SCLASLWKLK 52 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~-~~~~g~~~~~ 52 (395)
..+||+|||||++|+++|+.|.+.|++|+|+|+. +.+||.+...
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 4579999999999999999999999999999999 9999976543
No 235
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.30 E-value=6.2e-07 Score=83.12 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=39.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCcccccccC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER-GVPSLIIEKESCLASLWKLK 52 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~~~~g~~~~~ 52 (395)
.+||+|||||++|+++|..|++. |++|+|+|+.+.+||.+...
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 58999999999999999999999 99999999999999976554
No 236
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.29 E-value=2e-06 Score=81.99 Aligned_cols=94 Identities=22% Similarity=0.244 Sum_probs=71.8
Q ss_pred CeEEECCChHHHHHHHHHHHc--------------CCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCC
Q 039923 12 GPVIVGAGPSGLAAAACLKER--------------GVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREY 77 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~--------------g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (395)
.++|||||+.|+.+|..|++. ..+|+|+|..+.+.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 599999999999999998764 35899999987432
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-----EEEEeCEEEEeeCCC
Q 039923 78 PAYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-----YEFMCRWLIVATGEN 140 (395)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-----~~~~~d~lVlAtG~~ 140 (395)
+ ...+++.+++.+.+++.|+++++++.|++++.+. ........+ +++.+|.||.|+|..
T Consensus 268 ~--~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~--~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 268 N--MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ--LLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp T--TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE--EEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred c--CCCHHHHHHHHHHHHhcceeeecCceEEEEeCCc--eEEEEEecCcccceeeeccCEEEEccCCc
Confidence 1 1126788899999999999999999999986543 222222222 579999999999953
No 237
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.27 E-value=1.2e-06 Score=83.28 Aligned_cols=51 Identities=33% Similarity=0.361 Sum_probs=43.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCcccccccC-CcCceee
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERG-VPSLIIEKESCLASLWKLK-IYDHLQL 59 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g-~~v~lie~~~~~~g~~~~~-~~~~~~~ 59 (395)
..+||+|||||++|+++|++|.+.| .+|+|+|+.+.+||.+... .+.+..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~ 60 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTW 60 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEE
Confidence 4589999999999999999999998 7999999999999987752 4444443
No 238
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.27 E-value=3.9e-07 Score=84.01 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=67.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .....++.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~ 193 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE--------------------------------RQLDRDGGLF 193 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch--------------------------------hhcCHHHHHH
Confidence 36899999999999999999999999999999864321 0112567778
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEccEEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHEYEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~~~~~~d~lVlAtG~ 139 (395)
+.+.+++.|++++.+++|+++ ++++.+|.||+|+|.
T Consensus 194 ~~~~l~~~gV~~~~~~~v~~i--------------g~~~~~D~vv~a~G~ 229 (385)
T 3klj_A 194 LKDKLDRLGIKIYTNSNFEEM--------------GDLIRSSCVITAVGV 229 (385)
T ss_dssp HHHHHHTTTCEEECSCCGGGC--------------HHHHHHSEEEECCCE
T ss_pred HHHHHHhCCCEEEeCCEEEEc--------------CeEEecCeEEECcCc
Confidence 888888889999888877555 235789999999994
No 239
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.26 E-value=5.5e-07 Score=86.55 Aligned_cols=40 Identities=30% Similarity=0.494 Sum_probs=37.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCccccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG-VPSLIIEKESCLASLW 49 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g-~~v~lie~~~~~~g~~ 49 (395)
.+||+|||||++|++||+.|.+.| .+|+|+|+.+.+||-.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999999999 9999999999999944
No 240
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.25 E-value=2.6e-06 Score=77.73 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=71.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ...+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------------------------~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----------------------------------HGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----------------------------------CSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----------------------------------CHHHHHH
Confidence 36899999999999999999999999999998763210 0134455
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE---cc--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT---HE--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~---~~--~~~~~d~lVlAtG~ 139 (395)
+.+..++.+++++.+++|++++..++ +...|++ ++ ..+.+|.||+|+|.
T Consensus 208 l~~~~~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 208 VERARANGTIDVYLETEVASIEESNG-VLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp SHHHHHHTSEEEESSEEEEEEEEETT-EEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred HHHHhhcCceEEEcCcCHHHhccCCC-ceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 56666777899999999999987642 2113444 33 68999999999994
No 241
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.22 E-value=2.8e-06 Score=79.60 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=66.6
Q ss_pred CeEEEECCCcCHHHHHHHHhhCC--CeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchh
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNG--AQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTK 250 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (395)
|+|+|||+|..|+.+|..|++.+ .+||++.+++...... .+.......+ .
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p--------~l~~v~~g~~--------------------~ 54 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--------AFPHLAMGWR--------------------K 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--------GHHHHHHTCS--------------------C
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCc--------cHHHHhcCCC--------------------C
Confidence 68999999999999999998765 6899999988222110 0000011111 0
Q ss_pred hcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEec--CeEEEeCCcEecCcEEEEcCCCCCC
Q 039923 251 QIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTA--KGAEFVNRTVKEFDSIILATGYRSN 323 (395)
Q Consensus 251 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~--~~v~~~~g~~i~~D~vi~atG~~~~ 323 (395)
...+ ...+.+.+++.++++..+ |+.++. +.|.+++|+++++|.+|+|||.++.
T Consensus 55 ~~~i--------------------~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 55 FEDI--------------------SVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp GGGS--------------------EEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred HHHh--------------------hhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 0000 000112233446887766 778874 4588999999999999999998653
No 242
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.21 E-value=1.2e-05 Score=78.70 Aligned_cols=99 Identities=18% Similarity=0.103 Sum_probs=72.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
..+|+|||||+.|+.+|..|++.|.+|+++++.. +. + ....++.+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~--~~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL-------------------------------R--GFDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc-------------------------------C--cCCHHHHHH
Confidence 3689999999999999999999999999999862 11 0 012566777
Q ss_pred HHHHHHHcCCccccCceEEEEEEc-----CC--CCcEEEE--Ecc-EE--EEeCEEEEeeCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYD-----AA--MGHWRVK--THE-YE--FMCRWLIVATGENEVPV 144 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~-----~~--~~~~~v~--~~~-~~--~~~d~lVlAtG~~~~~~ 144 (395)
+.+.+++.|++++.++.+.+++.. +. .+.+.++ ..+ ++ +.+|.||+|+|. +|.
T Consensus 332 ~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~--~p~ 396 (598)
T 2x8g_A 332 VGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR--EPQ 396 (598)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE--EEC
T ss_pred HHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC--ccc
Confidence 778888889999999888888643 11 1344443 223 33 459999999994 444
No 243
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.20 E-value=1.3e-06 Score=82.53 Aligned_cols=41 Identities=39% Similarity=0.534 Sum_probs=37.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWK 50 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~ 50 (395)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 37999999999999999999999999999999999988543
No 244
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.19 E-value=5.9e-06 Score=74.50 Aligned_cols=90 Identities=21% Similarity=0.207 Sum_probs=67.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ...
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---------------------------------------~~~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---------------------------------------STI 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---------------------------------------CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC---------------------------------------CHH
Confidence 46899999999999999999999999999998763210 112
Q ss_pred HHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEcc------EEEEeCEEEEeeCC
Q 039923 90 MEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTHE------YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~~------~~~~~d~lVlAtG~ 139 (395)
+.+.+.+ .+++++.+++|.+++..++ +...|++.+ .++.+|.||+|+|.
T Consensus 214 ~~~~l~~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 214 MQKRAEKNEKIEILYNTVALEAKGDGK-LLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEEESSS-SEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHhcCCeEEeecceeEEEEcccC-cEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 2333334 4999999999999987652 222244432 68999999999994
No 245
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.19 E-value=7.3e-06 Score=77.58 Aligned_cols=99 Identities=22% Similarity=0.285 Sum_probs=73.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI-------------------------------T-LEDQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T-SCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC-------------------------------C-CCCHHHHHH
Confidence 46899999999999999999999999999999763320 0 002455555
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--c---EEEEeCEEEEeeCCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--E---YEFMCRWLIVATGENEVPVLP 146 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~---~~~~~d~lVlAtG~~~~~~~p 146 (395)
+.+..+ ++++.+++|++++..++ +.+.+++. + .++.+|.||+|+| .+|...
T Consensus 220 l~~~l~---v~i~~~~~v~~i~~~~~-~~v~v~~~~~~G~~~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSILK---LNIKFNSPVTEVKKIKD-DEYEVIYSTKDGSKKSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHHC---CCEECSCCEEEEEEEET-TEEEEEECCTTSCCEEEEESCEEECCC--EEECCC
T ss_pred HHhcCE---EEEEECCEEEEEEEcCC-CcEEEEEEecCCceEEEEcCEEEECcC--CCcccc
Confidence 555444 88899999999987542 34456665 2 4899999999999 445443
No 246
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.18 E-value=1.7e-06 Score=82.69 Aligned_cols=39 Identities=23% Similarity=0.365 Sum_probs=36.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccc
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLW 49 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~ 49 (395)
+||+|||||++|+++|..|.+.|++|+|+|+.+.+||-.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 699999999999999999999999999999999998843
No 247
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.16 E-value=1.4e-06 Score=79.85 Aligned_cols=42 Identities=29% Similarity=0.278 Sum_probs=38.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLK 52 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~ 52 (395)
+||+|||||++|+++|.+|++.|++|+|+|+.+.+||.....
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 43 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTE 43 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEee
Confidence 589999999999999999999999999999999999965543
No 248
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.16 E-value=1.6e-06 Score=82.30 Aligned_cols=41 Identities=29% Similarity=0.280 Sum_probs=37.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCcccccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG--VPSLIIEKESCLASLWK 50 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~~~~g~~~ 50 (395)
++||+|||||++|+++|++|.+.| ++|+|+|+.+.+||...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 479999999999999999999999 99999999998888433
No 249
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.16 E-value=4.5e-06 Score=77.39 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=67.7
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCC--CeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccc
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNG--AQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGD 248 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
.+|+|+|||+|..|+.+|..|++.+ .+|+++++++...... .+........+
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p--------~~~~v~~g~~~------------------ 54 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY--------MSNEVIGGDRE------------------ 54 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST--------THHHHHHTSSC------------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc--------CHHHHhcCCCC------------------
Confidence 3789999999999999999998765 4899998887222110 00001111100
Q ss_pred hhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEecC--eEEEeCCcEecCcEEEEcCCCCCCCC
Q 039923 249 TKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTAK--GAEFVNRTVKEFDSIILATGYRSNVS 325 (395)
Q Consensus 249 ~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~i~~D~vi~atG~~~~~~ 325 (395)
.+... . -.+.+...++++..+ |..++.. .+.+.+|.++++|.+|+|||.+++..
T Consensus 55 ~~~~~--------------------~---~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 55 LASLR--------------------V---GYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp GGGGE--------------------E---CSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGG
T ss_pred HHHHh--------------------h---CHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccC
Confidence 00000 0 012233346777666 7777654 58888999999999999999988753
No 250
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.15 E-value=1.8e-06 Score=82.43 Aligned_cols=41 Identities=24% Similarity=0.378 Sum_probs=38.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLW 49 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~ 49 (395)
..+||+|||||++|+++|+.|.+.|++|+|+|+.+.+||..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 45799999999999999999999999999999999999943
No 251
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.14 E-value=1.1e-06 Score=82.40 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
|++||+|||||++|+++|..|++.|++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 56899999999999999999999999999999976
No 252
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.11 E-value=8.8e-06 Score=76.35 Aligned_cols=105 Identities=14% Similarity=0.299 Sum_probs=67.8
Q ss_pred CCeEEEECCCcCHHHHHHHHhh---CCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccc
Q 039923 172 ASKVLVVGCGNSGMEISFDLCK---NGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGD 248 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~---~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
.++|+|||+|..|+.+|..|++ .+.+|+++++++...... .+..........
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~--------~~~~~~~g~~~~----------------- 58 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP--------SNPWVGVGWKER----------------- 58 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG--------GHHHHHHTSSCH-----------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC--------CccccccCccCH-----------------
Confidence 3689999999999999999998 789999999988211110 011111111100
Q ss_pred hhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEecC--eEEEeCCcEecCcEEEEcCCCCCCC
Q 039923 249 TKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTAK--GAEFVNRTVKEFDSIILATGYRSNV 324 (395)
Q Consensus 249 ~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~i~~D~vi~atG~~~~~ 324 (395)
. .....+.+.++..++++..+ +..++.. .+.+.+++++.+|.+|+|||.+|..
T Consensus 59 -~----------------------~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 59 -D----------------------DIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp -H----------------------HHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECG
T ss_pred -H----------------------HHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCc
Confidence 0 00011223333445666655 6666653 5888889899999999999998875
No 253
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.10 E-value=1.4e-05 Score=71.48 Aligned_cols=90 Identities=19% Similarity=0.086 Sum_probs=66.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l--- 196 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAY--- 196 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999875221 00222
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE----cc--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT----HE--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~----~~--~~~~~d~lVlAtG~ 139 (395)
.+.+.+.+++++.+++|++++..++ ....+.+ ++ .++.+|.||+|+|.
T Consensus 197 -~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 197 -VQEIKKRNIPYIMNAQVTEIVGDGK-KVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp -HHHHHHTTCCEECSEEEEEEEESSS-SEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred -HHHHhcCCcEEEcCCeEEEEecCCc-eEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 3334467999999999999987642 1222333 23 47999999999994
No 254
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.10 E-value=1.1e-05 Score=75.01 Aligned_cols=104 Identities=20% Similarity=0.309 Sum_probs=67.2
Q ss_pred CeEEEECCCcCHHHHHHHHhh---CCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccch
Q 039923 173 SKVLVVGCGNSGMEISFDLCK---NGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDT 249 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~---~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (395)
++|+|||+|.+|+.+|..|++ .|.+|+++++++ .+.-..... +.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~-~~~~~~~~~------------~~-------------------- 48 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR-FSYFRPALP------------HV-------------------- 48 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS-EEEECCSSC------------CC--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC-Cceeccchh------------hc--------------------
Confidence 579999999999999999999 899999999988 321111000 00
Q ss_pred hhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEecC--eEEEeCCcE----ecCcEEEEcCCCCC
Q 039923 250 KQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTAK--GAEFVNRTV----KEFDSIILATGYRS 322 (395)
Q Consensus 250 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~----i~~D~vi~atG~~~ 322 (395)
..+. .........+.+.+++.++++..+ +..++.. .+.+.+++. +++|.+|+|||.+|
T Consensus 49 -~~~~--------------~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 49 -AIGV--------------RDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp -CSSC--------------CCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred -ccCC--------------cCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCc
Confidence 0000 000111122334444456666655 6666544 577877764 99999999999988
Q ss_pred CC
Q 039923 323 NV 324 (395)
Q Consensus 323 ~~ 324 (395)
..
T Consensus 114 ~~ 115 (409)
T 3h8l_A 114 AT 115 (409)
T ss_dssp CG
T ss_pred Cc
Confidence 75
No 255
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.10 E-value=1.6e-05 Score=70.84 Aligned_cols=90 Identities=16% Similarity=0.128 Sum_probs=66.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... .
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~----~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------ADQ----V 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SCH----H
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------ccH----H
Confidence 3689999999999999999999999999999875321 001 2
Q ss_pred HHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCC
Q 039923 90 MEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~ 139 (395)
+.+.+.+ .+++++.+++|++++.+++ +...+++. + .++.+|.||+|+|.
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDGS-KVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESSS-SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCCC-cEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 2333444 5899999999999987542 21123332 2 57999999999994
No 256
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.09 E-value=1.3e-05 Score=71.89 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=66.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ..+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-KVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-HHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-hHH---
Confidence 3689999999999999999999999999999875321 00 122
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~ 139 (395)
.++..++.+++++.+++|++++.++ +...|.+. + .++.+|.||+|+|.
T Consensus 194 ~~~l~~~~gv~i~~~~~v~~i~~~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 194 QARAFANPKMKFIWDTAVEEIQGAD--SVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhcCCceEecCCceEEEccCC--cEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 2233334589999999999998743 32234432 3 47999999999994
No 257
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.08 E-value=1.2e-05 Score=71.75 Aligned_cols=91 Identities=19% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~--- 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPIT--- 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHH---
Confidence 4789999999999999999999999999999875321 00122
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~ 139 (395)
.+...++.+++++.+++|.+++..++ +...+++. + .++.+|.||+|+|.
T Consensus 185 ~~~l~~~~gv~v~~~~~v~~i~~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 185 LEHAKNNDKIEFLTPYVVEEIKGDAS-GVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHTCTTEEEETTEEEEEEEEETT-EEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHhhCCCeEEEeCCEEEEEECCCC-cEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 22233346899999999999987642 21123332 3 47999999999994
No 258
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.07 E-value=2.8e-06 Score=78.22 Aligned_cols=44 Identities=27% Similarity=0.229 Sum_probs=39.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCc
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIY 54 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~ 54 (395)
.||+|||||++|+++|..|.+.|++|+|+|+.+.+||.++....
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~ 47 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARD 47 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccc
Confidence 58999999999999999999999999999999999997765433
No 259
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.07 E-value=1.5e-05 Score=71.74 Aligned_cols=92 Identities=18% Similarity=0.234 Sum_probs=67.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|..|+.+|..|.+.|.+|+++++.+.+. . ...+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------------------------~-~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----------------------------------A-SKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------S-CHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----------------------------------c-cHHH---
Confidence 4689999999999999999999999999999876321 0 0111
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCc---EEEEE--cc--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGH---WRVKT--HE--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~---~~v~~--~~--~~~~~d~lVlAtG~ 139 (395)
.++..++.+++++.+++|.+++..++... +.+.. ++ .++.+|.||+|+|.
T Consensus 201 ~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 201 QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 12344567899999999999987652102 33332 22 68999999999994
No 260
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.07 E-value=4e-06 Score=79.54 Aligned_cols=43 Identities=35% Similarity=0.525 Sum_probs=38.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCcccccccC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKESCLASLWKLK 52 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~~~~g~~~~~ 52 (395)
.+||+|||||++|+++|..|.+.|+ +|+|+|+.+.+||.+...
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~ 47 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKT 47 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeec
Confidence 4799999999999999999999998 899999999999865543
No 261
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.06 E-value=8.5e-06 Score=69.40 Aligned_cols=175 Identities=17% Similarity=0.169 Sum_probs=99.1
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhhc
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQI 252 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (395)
-.|+|||+|.+|+++|..|++.|.+|++++++.... -. .... .+......++...+. + .
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~-G~-~~~~-----------~~~~~~~~~~~~~~~-----d--~- 62 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV-MM-PFLP-----------PKPPFPPGSLLERAY-----D--P- 62 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT-TC-CSSC-----------CCSCCCTTCHHHHHC-----C--T-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC-Cc-ccCc-----------cccccchhhHHhhhc-----c--C-
Confidence 469999999999999999999999999999874111 00 0000 000000000000000 0 0
Q ss_pred CCCCCCCCCCcccCCCCCCcccChhhHhhhhcC-CeEEecC-ccEEec--C---eEEEeCCcEecCcEEEEcCCCCCCCC
Q 039923 253 GIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSG-EIKVVPG-IQKFTA--K---GAEFVNRTVKEFDSIILATGYRSNVS 325 (395)
Q Consensus 253 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~-v~~~~~--~---~v~~~~g~~i~~D~vi~atG~~~~~~ 325 (395)
.++ .+..+...+.+.+++. ++++... |+++.. . ++.+.+|+++++|.||+|+|......
T Consensus 63 ------~g~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 63 ------KDE--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp ------TCC--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred ------CCC--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 000 0112223344555553 6776644 655542 2 36677888899999999999966532
Q ss_pred cc----------------------ccccccccccC--------CCCCCC------------CC-CCCCCCCCCeEEEEec
Q 039923 326 SW----------------------LKEASLFNQKN--------NNNPQD------------SY-PKNWKGKNGVYSVGFA 362 (395)
Q Consensus 326 ~~----------------------~~~~~l~~~~~--------~g~~~~------------~~-~~~~~~~~~iya~Gd~ 362 (395)
.+ +.+.++. ++. .|.|.. +. ....+++||||++|||
T Consensus 129 ~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~-~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~ 207 (232)
T 2cul_A 129 LFLGGVVEEAGRLSEASYPDLLEDLSRLGFR-FVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLC 207 (232)
T ss_dssp EEETTEEESEEETTEECCSHHHHHHHHTTCC-EEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGG
T ss_pred eecCCccCCCCCCcccchhhhCHHHHhCCCe-EEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeec
Confidence 11 1111222 110 011100 00 0112589999999999
Q ss_pred ccccc---cchhhHHHHHHHHHhhh
Q 039923 363 RQGLL---GISMDAHKVADDIASQW 384 (395)
Q Consensus 363 ~~~~~---~a~~~g~~~a~~i~~~~ 384 (395)
+ ... .++.||+.+|++|.+.|
T Consensus 208 a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 208 V-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp T-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred c-cCccHHHHHHHHHHHHHHHHhhc
Confidence 9 544 77899999999999876
No 262
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.06 E-value=1.1e-05 Score=72.53 Aligned_cols=89 Identities=16% Similarity=0.012 Sum_probs=67.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. +..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~----------------------------------~~-~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR----------------------------------AH-EHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS----------------------------------SC-HHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC----------------------------------cc-HHH---
Confidence 4689999999999999999999999999999876321 01 111
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc------EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE------YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~------~~~~~d~lVlAtG~ 139 (395)
...+++.+++++.+++|.+++..++ ...+++.+ .++.+|.||+|+|.
T Consensus 196 -~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 196 -VENLHASKVNVLTPFVPAELIGEDK--IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp -HHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred -HHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 1235667999999999999987653 33344432 67999999999994
No 263
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.04 E-value=8.9e-06 Score=73.39 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=68.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. +.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~~-~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------AS-KIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------SC-TTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------cc-HHHH--
Confidence 4789999999999999999999999999999875321 00 1111
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--cc--EEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HE--YEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~--~~~~~d~lVlAtG~~~~~~~ 145 (395)
++..++.+++++.+++|++++..+....+.+.. ++ .++.+|.||+|+| ..|..
T Consensus 198 -~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2a87_A 198 -DRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIG--HEPRS 254 (335)
T ss_dssp -HHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSC--EEECC
T ss_pred -HHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccC--CccCh
Confidence 233455689999999999998665222344432 22 6899999999999 44443
No 264
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.04 E-value=1.8e-05 Score=70.68 Aligned_cols=90 Identities=19% Similarity=0.205 Sum_probs=68.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . .. .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~-~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK----------------------------------A-QP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC----------------------------------S-CH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC----------------------------------c-CH---HH
Confidence 4789999999999999999999999999999876321 0 01 22
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~ 139 (395)
+++..++.+++++.+++|++++.++ +...+++. + .++.+|.||+|+|.
T Consensus 196 ~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 196 VETVKKKPNVEFVLNSVVKEIKGDK--VVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHhCCCcEEEeCCEEEEEeccC--ceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 3444445589999999999998764 44334443 2 47999999999994
No 265
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.02 E-value=5e-06 Score=73.48 Aligned_cols=83 Identities=11% Similarity=-0.002 Sum_probs=64.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.| +|+++++... .+.+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~----------------------------------------~~~~~ 179 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV----------------------------------------EPDAD 179 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC----------------------------------------CCCHH
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC----------------------------------------CCCHH
Confidence 478999999999999999999999 9999987641 01123
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+.+.+++.+++++. ++|++++..+ .+++.+ +++.+|.||+|+|.
T Consensus 180 ~~~~l~~~gv~i~~-~~v~~i~~~~-----~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 180 QHALLAARGVRVET-TRIREIAGHA-----DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp HHHHHHHTTCEEEC-SCEEEEETTE-----EEEETTSCEEEESEEEECCEE
T ss_pred HHHHHHHCCcEEEc-ceeeeeecCC-----eEEeCCCCEEEEEEEEEccCc
Confidence 45566677999874 8888886432 366666 78999999999994
No 266
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.01 E-value=6.1e-06 Score=77.28 Aligned_cols=42 Identities=10% Similarity=0.162 Sum_probs=39.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL 51 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~ 51 (395)
.+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 479999999999999999999999999999999999996554
No 267
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.01 E-value=4.4e-06 Score=76.32 Aligned_cols=34 Identities=26% Similarity=0.474 Sum_probs=32.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
++||+|||||++|+++|++|+++|++|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4799999999999999999999999999999974
No 268
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.00 E-value=6.1e-06 Score=82.04 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=70.1
Q ss_pred CCCeEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVG--AGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG--~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.++|+||| +|+.|+.+|..|.+.|.+|+++++.+.+.... ....+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhH
Confidence 35699999 99999999999999999999999876433110 001124
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--c-c-EEEEeCEEEEeeCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--H-E-YEFMCRWLIVATGE 139 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~-~-~~~~~d~lVlAtG~ 139 (395)
..+.+.+++.|++++.+++|++++.+. ..+.. . + +++.+|.||+|+|.
T Consensus 571 ~~l~~~l~~~GV~i~~~~~V~~i~~~~----~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 571 NRIQRRLIENGVARVTDHAVVAVGAGG----VTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEETTE----EEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHHCCCEEEcCcEEEEEECCe----EEEEEccCCeEEEEECCEEEECCCC
Confidence 455666777899999999999997433 23432 2 2 68999999999993
No 269
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.99 E-value=4.7e-06 Score=79.68 Aligned_cols=41 Identities=32% Similarity=0.306 Sum_probs=37.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLW 49 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~ 49 (395)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 35799999999999999999999999999999999998854
No 270
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.98 E-value=2.4e-05 Score=69.68 Aligned_cols=91 Identities=16% Similarity=0.175 Sum_probs=67.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. . ..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~-~---~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR----------------------------------AA-P---ST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB----------------------------------SC-H---HH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC----------------------------------CC-H---HH
Confidence 4689999999999999999999999999999876321 00 1 22
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEc--c---EEEEeCEEEEeeCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTH--E---YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~--~---~~~~~d~lVlAtG~ 139 (395)
+++..++.+++++.+++|.+++..++ +...+++. + .++.+|.||+|+|.
T Consensus 189 ~~~~~~~~gv~~~~~~~v~~i~~~~~-~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 189 VEKVKKNEKIELITSASVDEVYGDKM-GVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHCTTEEEECSCEEEEEEEETT-EEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHHhcCCeEEEeCcEEEEEEcCCC-cEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 34444677999999999999987652 22223332 3 48999999999994
No 271
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.95 E-value=8.8e-06 Score=73.43 Aligned_cols=36 Identities=33% Similarity=0.338 Sum_probs=33.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL 45 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~ 45 (395)
|+||+|||||++|+.+|..|++.|++|+|+|+.+..
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 479999999999999999999999999999997643
No 272
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.91 E-value=2.8e-05 Score=72.79 Aligned_cols=105 Identities=14% Similarity=0.219 Sum_probs=66.8
Q ss_pred CeEEEECCCcCHHHHHHHHhh--CCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchh
Q 039923 173 SKVLVVGCGNSGMEISFDLCK--NGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTK 250 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~--~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (395)
++|+|||+|..|+.+|..|++ .+.+|+++++++ .+.-.. .+......... ..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~-~~~~~~-------~~~~~~~g~~~------------------~~ 56 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP-YFGFTP-------AFPHLAMGWRK------------------FE 56 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS-EEECGG-------GHHHHHHTCSC------------------GG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC-CCCcCC-------CcchhccCccC------------------HH
Confidence 689999999999999999998 788999999987 321110 00000001100 00
Q ss_pred hcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC-ccEEecC--eEEEeCCcEecCcEEEEcCCCCCCCC
Q 039923 251 QIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG-IQKFTAK--GAEFVNRTVKEFDSIILATGYRSNVS 325 (395)
Q Consensus 251 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~i~~D~vi~atG~~~~~~ 325 (395)
.....+.+.++..++++..+ +..++.. .+.+.+++++.+|.+|+|||.+|+.+
T Consensus 57 ----------------------~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 57 ----------------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ----------------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred ----------------------HHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 00001122233345666655 6666644 57788888899999999999988653
No 273
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.90 E-value=8.1e-06 Score=76.61 Aligned_cols=42 Identities=14% Similarity=0.197 Sum_probs=38.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCccccccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKL 51 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~ 51 (395)
.+||+|||+|.+|+++|..|++.|.+|+++|+++.+||....
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 479999999999999999999999999999999999986544
No 274
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.85 E-value=1.5e-05 Score=78.74 Aligned_cols=42 Identities=31% Similarity=0.374 Sum_probs=38.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWK 50 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~ 50 (395)
..++|+|||||++|+++|..|.+.|++|+|+|+.+.+||.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 358999999999999999999999999999999999998543
No 275
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.84 E-value=6.5e-05 Score=72.03 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=66.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||.+|+.+|..|++.|.+|+++++.+.+. .. ..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 4689999999999999999999999999999875321 00 22
Q ss_pred HHHHHHH-cCCccccCceEEEEEEcCCCCcEEEEEc----c--EEEEeCEEEEeeCC
Q 039923 90 MEAYANH-FEIEPLLGQEVQWAKYDAAMGHWRVKTH----E--YEFMCRWLIVATGE 139 (395)
Q Consensus 90 ~~~~~~~-~~~~~~~~~~V~~v~~~~~~~~~~v~~~----~--~~~~~d~lVlAtG~ 139 (395)
+.+.+.+ .+++++.++++++++.+++ +...+.+. + .++.+|.||+|+|.
T Consensus 396 l~~~l~~~~gV~v~~~~~v~~i~~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 396 LQDKVRSLKNVDIILNAQTTEVKGDGS-KVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHTTCTTEEEECSEEEEEEEECSS-SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEcCCC-cEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 3344445 5899999999999987542 22123332 2 57999999999994
No 276
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.83 E-value=6e-05 Score=77.57 Aligned_cols=90 Identities=20% Similarity=0.119 Sum_probs=68.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHHH
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITYM 90 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
++|+|||+|+.|+.+|..|.+.|.+|+|+|+.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------~~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------AA----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-------------------------------------HH-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-------------------------------------hh-----
Confidence 689999999999999999999999999999876321 01
Q ss_pred HHHHHHcCCccccCceEEEEEEcCCCC--cEEEEE------cc--EEEEeCEEEEeeCCCCCCC
Q 039923 91 EAYANHFEIEPLLGQEVQWAKYDAAMG--HWRVKT------HE--YEFMCRWLIVATGENEVPV 144 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~~V~~v~~~~~~~--~~~v~~------~~--~~~~~d~lVlAtG~~~~~~ 144 (395)
.+.+++.|++++.++.|.+++..++++ .+++.. .+ +++.+|.||+|+| ..|.
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G--~~P~ 384 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG--FNPV 384 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC--EEEC
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC--cCcC
Confidence 344567799999999999998741113 333433 13 6899999999999 4444
No 277
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.83 E-value=1.8e-05 Score=79.72 Aligned_cols=42 Identities=31% Similarity=0.374 Sum_probs=38.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWK 50 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~ 50 (395)
..++|+|||||++|+++|+.|.+.|++|+|+|+...+||.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 318 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 318 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCcee
Confidence 357999999999999999999999999999999999998543
No 278
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.80 E-value=1e-05 Score=75.16 Aligned_cols=149 Identities=17% Similarity=0.142 Sum_probs=75.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeecc---ccCCChh-----HHHHHHHhhCChhHHHHHHHHhh
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKK---ILGRSSF-----AISVWLLKWFPVDVVDRFLLFCS 242 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 242 (395)
....|+|||+|.+|+.+|..|++.|.+|+++++.+ .+.... -.+.... ... .+....+......+..+..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~-~~g~~~~~sGgg~~n~t~~~~~~~-~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR-APGEKIRISGGGRCNFTNIHASPR-NFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-SSCHHHHHSGGGTCEEEETTCSGG-GEEESSTTTTHHHHHHSCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-CCCceeEEcCCCceeccCCCCCHH-HHhhcCHHHHHHHHHhcCH
Confidence 34579999999999999999999999999999887 221000 0000000 000 0000001111111111111
Q ss_pred hhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEe--cC--eEEEeCCcEecCcEEEE
Q 039923 243 RLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFT--AK--GAEFVNRTVKEFDSIIL 316 (395)
Q Consensus 243 ~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~--~~--~v~~~~g~~i~~D~vi~ 316 (395)
.......++.|+........... .......+...+.+.+++.+++++.+ |..+. +. .+.+.+| ++.+|.||+
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTLGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEE
T ss_pred HHHHHHHHHcCCCcEEeeCCEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEE
Confidence 11112223444431111100000 11122233444566666667777765 66653 23 3555666 899999999
Q ss_pred cCCCCCC
Q 039923 317 ATGYRSN 323 (395)
Q Consensus 317 atG~~~~ 323 (395)
|+|..+.
T Consensus 182 AtG~~S~ 188 (417)
T 3v76_A 182 ASGGKSI 188 (417)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9999873
No 279
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.77 E-value=1.2e-05 Score=73.03 Aligned_cols=32 Identities=31% Similarity=0.513 Sum_probs=30.7
Q ss_pred CeEEECCChHHHHHHHHHHHcC------CCEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERG------VPSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g------~~v~lie~~~ 43 (395)
||+|||||++|+++|++|+++| .+|+|+|+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 8999999999999999999998 8999999985
No 280
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.75 E-value=6.2e-05 Score=71.08 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=59.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||+|.+|+-+|..|++.|.+|+++++.+.+.+. .++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~---------------------------~~~----------- 238 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY---------------------------KWP----------- 238 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC---------------------------CCC-----------
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC---------------------------CCC-----------
Confidence 478999999999999999999999999999987632100 000
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCCCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGENEVPVLPK 147 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~~~~~~~p~ 147 (395)
.+++++ ..|++++ + +. |++.+ +++.+|.||+|||. .|..|.
T Consensus 239 -------~~V~~~--~~V~~i~--~--~~--V~~~dG~~i~~D~Vi~atG~--~p~~~~ 280 (464)
T 2xve_A 239 -------ENWDER--PNLVRVD--T--EN--AYFADGSSEKVDAIILCTGY--IHHFPF 280 (464)
T ss_dssp -------TTEEEC--SCEEEEC--S--SE--EEETTSCEEECSEEEECCCB--CCCCTT
T ss_pred -------CceEEc--CCeEEEe--C--CE--EEECCCCEEeCCEEEECCCC--CCCCCC
Confidence 144443 5677664 2 33 55555 78899999999994 555443
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.73 E-value=7.1e-05 Score=70.37 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=61.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVP-SLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~-v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
.++|+|||||..|+-+|..+.+.|.+ |+++++..... ++. ...+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~------------------------------~p~--~~~e--- 308 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKN------------------------------MPG--SQRE--- 308 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTT------------------------------CSS--CHHH---
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccC------------------------------CCC--CHHH---
Confidence 47899999999999999999999985 99999875320 010 0111
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEEEE----------------E-cc--EEEEeCEEEEeeCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVK----------------T-HE--YEFMCRWLIVATGE 139 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~----------------~-~~--~~~~~d~lVlAtG~ 139 (395)
...+++.|+++++++.++++..+..-..+.+. . ++ .++.+|.||+|+|.
T Consensus 309 --~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 --VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp --HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred --HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 13455669998888777666532100001111 0 22 57999999999994
No 282
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.72 E-value=9e-05 Score=65.94 Aligned_cols=96 Identities=20% Similarity=0.234 Sum_probs=63.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFITY 89 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (395)
.++|+|||||+.|+.+|..|.+.|.+|+++++..... .. .. .
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~----------------------------------~~-~~---~ 193 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR----------------------------------AS-KT---M 193 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SC-HH---H
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc----------------------------------cc-ch---h
Confidence 4689999999999999999999999999999764210 11 11 1
Q ss_pred HHHHHHHcCCccccCceEEEEEEcCCC-CcEEEEEc----cEEEEeCEEEEeeCCCCCCCC
Q 039923 90 MEAYANHFEIEPLLGQEVQWAKYDAAM-GHWRVKTH----EYEFMCRWLIVATGENEVPVL 145 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~~V~~v~~~~~~-~~~~v~~~----~~~~~~d~lVlAtG~~~~~~~ 145 (395)
........+...+..+.+..+...... ....+... .+.+.+|.|++|+| ..|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G--~~pn~ 252 (314)
T 4a5l_A 194 QERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIG--HSPNS 252 (314)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESC
T ss_pred hhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecc--cccCh
Confidence 122333335556666677777665421 12223321 17899999999999 45543
No 283
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.69 E-value=2.2e-05 Score=76.74 Aligned_cols=39 Identities=28% Similarity=0.309 Sum_probs=36.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASL 48 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~ 48 (395)
.+||+|||||++|+.+|..|++.|++|+|||+....+|.
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCc
Confidence 479999999999999999999999999999999877763
No 284
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.63 E-value=0.00015 Score=69.61 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=32.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999999999999999875
No 285
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.63 E-value=0.00014 Score=71.92 Aligned_cols=120 Identities=13% Similarity=0.037 Sum_probs=65.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEe--cCCCccc--cccc-C----CcCceeeecCCccccCC--CCCCCCCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIE--KESCLAS--LWKL-K----IYDHLQLHLPKQFCQLP--YVPFPREYP 78 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie--~~~~~~g--~~~~-~----~~~~~~~~~~~~~~~~~--~~~~~~~~~ 78 (395)
.++|+|||||+.|+.+|..|++.|.+|+++- -....+. .+.. . .++... .......-+. ...+...+
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~~~~~l~~~l- 571 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIP-RSPRQIVMLQRKASKPGQGL- 571 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCC-CCSSEEEEECSSCSCTTTTS-
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccC-CCCcEEEEEEecchhhcccc-
Confidence 4789999999999999999999987765420 0000000 0000 0 000000 0000000000 00000010
Q ss_pred CCCCHHHHHHHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEEcc--EEEEeCEEEEeeCC
Q 039923 79 AYPSGQQFITYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE--YEFMCRWLIVATGE 139 (395)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~--~~~~~d~lVlAtG~ 139 (395)
......++.+.+++.|++++.+++|++++. +.+.++.++ +++.+|.||+|+|.
T Consensus 572 ----~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 572 ----GKTTGWIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVVINGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp ----CTTTHHHHHHHHHHTTCEEECSCEEEEEET----TEEEEEETTEEEEECCSEEEECCCE
T ss_pred ----ccccHHHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEecCCeEEEEeCCEEEECCCc
Confidence 112334456667778999999999998873 334443344 68999999999993
No 286
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.61 E-value=5.5e-05 Score=68.57 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=29.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++|+|||+|..|+.+|..|++.+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 478999999999999999999998 699999873
No 287
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.61 E-value=0.00024 Score=66.82 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=71.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--------------------CC-CEEEEecCCCcccccccC------CcCceeeec-
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--------------------GV-PSLIIEKESCLASLWKLK------IYDHLQLHL- 61 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--------------------g~-~v~lie~~~~~~g~~~~~------~~~~~~~~~- 61 (395)
.++|+|||+|..|+.+|..|++. |. +|+|+++...+...+... ..++.....
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~ 226 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVID 226 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeC
Confidence 46899999999999999999874 54 899999986443211100 011111000
Q ss_pred CCccccCCCCCCCCCCCCC-CCHHHHHHHHHHHHHH------cCCccccCceEEEEEEcCCCCcEEEEE-----------
Q 039923 62 PKQFCQLPYVPFPREYPAY-PSGQQFITYMEAYANH------FEIEPLLGQEVQWAKYDAAMGHWRVKT----------- 123 (395)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~V~~v~~~~~~~~~~v~~----------- 123 (395)
+..+. . ......... .....+.+.+.+++.+ .++++++++.+.++..++.-..+++..
T Consensus 227 ~~~~~--~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~ 302 (456)
T 1lqt_A 227 PAELD--G--ITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRV 302 (456)
T ss_dssp GGGGT--T--CCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSE
T ss_pred hHHhc--c--chhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccc
Confidence 00000 0 000000000 0012234555565655 688899999998887543112233331
Q ss_pred ----cc--EEEEeCEEEEeeCCCCC
Q 039923 124 ----HE--YEFMCRWLIVATGENEV 142 (395)
Q Consensus 124 ----~~--~~~~~d~lVlAtG~~~~ 142 (395)
++ +++.+|.||.|+|..+.
T Consensus 303 ~~~~~g~~~~i~~d~vi~a~G~~p~ 327 (456)
T 1lqt_A 303 AAKDTGEREELPAQLVVRSVGYRGV 327 (456)
T ss_dssp EEEEEEEEEEEECSEEEECSCEECC
T ss_pred cccCCCceEEEEcCEEEEccccccC
Confidence 22 57999999999996433
No 288
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.58 E-value=9.5e-05 Score=70.43 Aligned_cols=35 Identities=37% Similarity=0.562 Sum_probs=32.8
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
....|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 46789999999999999999999999999999987
No 289
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.57 E-value=8.9e-05 Score=74.05 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=66.5
Q ss_pred CCCeEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHH
Q 039923 10 TPGPVIVG--AGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFI 87 (395)
Q Consensus 10 ~~~vvIIG--~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (395)
.++|+||| ||..|+.+|..|.+.|.+|+++++.+ +..... + . .. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~-----------------~---------~--~~----~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH-----------------F---------T--LE----Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH-----------------H---------T--TC----H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc-----------------c---------c--cc----H
Confidence 46899999 99999999999999999999999876 321000 0 0 01 2
Q ss_pred HHHHHHHHHcCCccccCceEEEEEEcCCCCcEEEEE--cc--E------------------EEEeCEEEEeeCC
Q 039923 88 TYMEAYANHFEIEPLLGQEVQWAKYDAAMGHWRVKT--HE--Y------------------EFMCRWLIVATGE 139 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~--~~--~------------------~~~~d~lVlAtG~ 139 (395)
..+.+.+++.|++++.+++|++++.. ...++. .+ + .+.+|.||+|+|.
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 34455566779999999999998732 223332 11 2 2999999999993
No 290
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.56 E-value=0.00019 Score=67.42 Aligned_cols=34 Identities=12% Similarity=-0.015 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVP-SLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~-v~lie~~~ 43 (395)
.++|+|||+|.+|+-+|..|++.+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 47899999999999999999999998 99999875
No 291
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.55 E-value=0.00031 Score=62.42 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=32.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
.++|+|||||+.|+.+|..|.+.|.+|+|+++.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 36899999999999999999999999999998763
No 292
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.54 E-value=0.00015 Score=67.02 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+.+|..+++.|.+|+++++.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 369999999999999999999999999999986
No 293
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.54 E-value=8.9e-05 Score=71.04 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
....|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 34689999999999999999999999999999886
No 294
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.53 E-value=0.00013 Score=68.45 Aligned_cols=149 Identities=19% Similarity=0.296 Sum_probs=75.5
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeecc-cc--CCCh----hHHHHHHHhhCC---hhHHHHHHHHhh
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKK-IL--GRSS----FAISVWLLKWFP---VDVVDRFLLFCS 242 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~-~~--~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~ 242 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+ ...... .. +... ..+.. +...++ ......+..+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~-~~g~~~~~sg~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN-KLGRKLAISGGGRCNVTNRLPLDE-IVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-SSCHHHHHTGGGTCCCEECSCHHH-HHHTCTBTGGGGHHHHHHSCH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC-CCCceeEEeCCCceeccCcccHHH-HHHHhccChHHHHHHHHhcCH
Confidence 469999999999999999999999999999876 221000 00 0000 00001 111111 111111111111
Q ss_pred hhhccchhhcCCCCCCCCCCcccCCCCCCcccChhhHhhhhcCCeEEecC--ccEEe--cC---eEEEeCCcEecCcEEE
Q 039923 243 RLVLGDTKQIGIQRPKMGPLQWKNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFT--AK---GAEFVNRTVKEFDSII 315 (395)
Q Consensus 243 ~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~--~~---~v~~~~g~~i~~D~vi 315 (395)
......+...|+...................+...+.+.+++.++++..+ |.++. +. ++.+.+|+++.+|.||
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VV 184 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVV 184 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEE
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEE
Confidence 11111223334321000000000001111223344566666677888765 66554 22 3777788779999999
Q ss_pred EcCCCCCC
Q 039923 316 LATGYRSN 323 (395)
Q Consensus 316 ~atG~~~~ 323 (395)
+|+|..+.
T Consensus 185 lAtGg~s~ 192 (447)
T 2i0z_A 185 IAVGGKSV 192 (447)
T ss_dssp ECCCCSSS
T ss_pred ECCCCCcC
Confidence 99999873
No 295
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.52 E-value=0.00018 Score=63.84 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=29.6
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.|+|||+|+.|+..|..+++.|.+|+++++..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 59999999999999999999999999999764
No 296
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.50 E-value=0.00047 Score=64.89 Aligned_cols=127 Identities=15% Similarity=0.143 Sum_probs=71.4
Q ss_pred CCCeEEECCChHHHHHHHHHH--------------------HcCC-CEEEEecCCCcccccccCC------cCceeeec-
Q 039923 10 TPGPVIVGAGPSGLAAAACLK--------------------ERGV-PSLIIEKESCLASLWKLKI------YDHLQLHL- 61 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~--------------------~~g~-~v~lie~~~~~~g~~~~~~------~~~~~~~~- 61 (395)
.++|+|||+|..|+.+|..|+ +.|. +|+|+++...+...+.... .+......
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~ 224 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLD 224 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEec
Confidence 478999999999999999999 5687 6999999864321111000 01110000
Q ss_pred CCccccCCCCCCCCCCCCCC-CHHHHHHHHHHHHHH--------------cCCccccCceEEEEEEcCCC-C--cEEEEE
Q 039923 62 PKQFCQLPYVPFPREYPAYP-SGQQFITYMEAYANH--------------FEIEPLLGQEVQWAKYDAAM-G--HWRVKT 123 (395)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~V~~v~~~~~~-~--~~~v~~ 123 (395)
+..+ ... ...++... ....+.+.+.+.+.+ .++++++++.+.++...++. . .+++..
T Consensus 225 ~~~~---~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~ 299 (460)
T 1cjc_A 225 PADF---LGL--QDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAV 299 (460)
T ss_dssp GGGG---TTH--HHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEE
T ss_pred hhhh---cch--hhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEE
Confidence 0000 000 00000011 112245555555554 68889999999888765321 1 122221
Q ss_pred --------------cc--EEEEeCEEEEeeCCCC
Q 039923 124 --------------HE--YEFMCRWLIVATGENE 141 (395)
Q Consensus 124 --------------~~--~~~~~d~lVlAtG~~~ 141 (395)
++ .++.+|.||+|+|..+
T Consensus 300 ~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 300 TRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred EEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 22 6899999999999543
No 297
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.47 E-value=5.6e-05 Score=72.69 Aligned_cols=36 Identities=36% Similarity=0.326 Sum_probs=31.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKE-RGVPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~-~g~~v~lie~~~~ 44 (395)
..||+||||||++|+.+|.+|++ .+++|+|+|+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 35899999999999999999998 4789999999853
No 298
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.44 E-value=8.8e-05 Score=71.62 Aligned_cols=35 Identities=40% Similarity=0.585 Sum_probs=33.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|++|||+|++|+.+|.+|++.|.+|+|+|+..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999985
No 299
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.44 E-value=0.0001 Score=71.50 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcccccccCC
Q 039923 1 MSSKAKRFWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLASLWKLKI 53 (395)
Q Consensus 1 m~~~~~~~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~g~~~~~~ 53 (395)
|+..++ +.+|++|||+|..|..+|..|++.|.+|++||++++.||.|....
T Consensus 1 m~~~~~--~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~ 51 (650)
T 1vg0_A 1 MADNLP--SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFS 51 (650)
T ss_dssp --CCCC--SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC
T ss_pred CCccCC--CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccccc
Confidence 555543 469999999999999999999999999999999999999776543
No 300
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.41 E-value=4.9e-05 Score=74.63 Aligned_cols=36 Identities=28% Similarity=0.340 Sum_probs=34.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--------CCEEEEecCC-Cc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG--------VPSLIIEKES-CL 45 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g--------~~v~lie~~~-~~ 45 (395)
.++|+|||||++|+++|+.|.+.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999998 8999999998 88
No 301
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.40 E-value=0.00075 Score=69.99 Aligned_cols=91 Identities=14% Similarity=0.179 Sum_probs=63.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCcccccccCCcCceeeecCCccccCCCCCCCCCCCCCCCHHHHHH
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKESCLASLWKLKIYDHLQLHLPKQFCQLPYVPFPREYPAYPSGQQFIT 88 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (395)
..+|+|||||..|+.+|..+.+.|. +|+++++.+..- . + ....++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~---------------------~---------~--~~~~e~-- 377 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN---------------------I---------R--AVPEEV-- 377 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGG---------------------C---------C--SCHHHH--
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhh---------------------C---------C--CCHHHH--
Confidence 3589999999999999999999997 899999875100 0 0 011222
Q ss_pred HHHHHHHHcCCccccCceEEEEEEcCCCCcEE-EE--------------Ecc--EEEEeCEEEEeeCC
Q 039923 89 YMEAYANHFEIEPLLGQEVQWAKYDAAMGHWR-VK--------------THE--YEFMCRWLIVATGE 139 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~V~~v~~~~~~~~~~-v~--------------~~~--~~~~~d~lVlAtG~ 139 (395)
..+++.|++++.++.+.++...+ +.+. |+ .++ .++.+|.||+|+|.
T Consensus 378 ---~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 378 ---ELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp ---HHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred ---HHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 34556799998888888776532 2211 21 122 57999999999994
No 302
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.38 E-value=0.00051 Score=62.93 Aligned_cols=137 Identities=18% Similarity=0.136 Sum_probs=73.6
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecCceeeeccccCCChhHHHHHHHhhCChhHHHHHHHHhhhhhccchhh
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDKVHILPKKILGRSSFAISVWLLKWFPVDVVDRFLLFCSRLVLGDTKQ 251 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (395)
..+|+|||+|.+|+.+|..|++.|.+|+++++++ ...+. ..+.........++..+. +.+.+ ..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~-~~~~~-~~~~~l~~~~~~~l~~~g--~~~~~------------~~ 74 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS-ELRAF-GAGIYLWHNGLRVLEGLG--ALDDV------------LQ 74 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SCCCC-SSEEEEEHHHHHHHHHTT--CHHHH------------HT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCCC-CceEEeCccHHHHHHHcC--CHHHH------------Hh
Confidence 4689999999999999999999999999999887 22110 000000111111111111 00111 00
Q ss_pred cCCCCCC-----CCCCcc-------cCCCCCCcccChhhHhhhhcCCeEEecC--ccEEecC-eEEEeCCcEecCcEEEE
Q 039923 252 IGIQRPK-----MGPLQW-------KNSVGKTPVLDDGAFAKIKSGEIKVVPG--IQKFTAK-GAEFVNRTVKEFDSIIL 316 (395)
Q Consensus 252 ~gi~~~~-----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-~v~~~~g~~i~~D~vi~ 316 (395)
.+..... .+.... +...-.+..+...+.+.+.+.++++..+ |..+..+ .+.+.+|+++++|.||.
T Consensus 75 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~ 154 (379)
T 3alj_A 75 GSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVG 154 (379)
T ss_dssp TCBCCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEE
T ss_pred hCCCccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEE
Confidence 0100000 000000 0000001222334455566666777755 5555422 67778888999999999
Q ss_pred cCCCCCCC
Q 039923 317 ATGYRSNV 324 (395)
Q Consensus 317 atG~~~~~ 324 (395)
|+|..+..
T Consensus 155 AdG~~s~v 162 (379)
T 3alj_A 155 ADGVGSKV 162 (379)
T ss_dssp CCCTTCHH
T ss_pred CCCccHHH
Confidence 99998743
No 303
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.38 E-value=0.00037 Score=67.03 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=31.5
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+|+|||+|.+|+.+|..|.+.|.+|+++++++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 304
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.29 E-value=0.00014 Score=70.34 Aligned_cols=36 Identities=36% Similarity=0.350 Sum_probs=33.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERG-VPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g-~~v~lie~~~~ 44 (395)
..+|+||||||.||+.+|.+|++.+ .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3589999999999999999999998 79999999875
No 305
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.26 E-value=0.00059 Score=62.94 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=32.1
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4689999999999999999999999999999987
No 306
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.24 E-value=0.00072 Score=65.11 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.4
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+|+|||+|.+|+.+|..|.+.|.+|+++++++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 307
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.23 E-value=0.00024 Score=63.45 Aligned_cols=33 Identities=18% Similarity=0.491 Sum_probs=30.6
Q ss_pred CeEEEECCCcCHHHHHHHHhhC--CCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKN--GAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4699999999999999999987 99999999886
No 308
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.23 E-value=0.00061 Score=60.50 Aligned_cols=32 Identities=28% Similarity=0.614 Sum_probs=30.2
Q ss_pred eEEEECCCcCHHHHHHHHhhC--CCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKN--GAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 205 (395)
.|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999988 99999999876
No 309
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.21 E-value=0.00014 Score=69.98 Aligned_cols=35 Identities=40% Similarity=0.462 Sum_probs=32.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL 45 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~ 45 (395)
.+|+||||||.+|+.+|.+|++ |.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998654
No 310
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.14 E-value=0.0011 Score=61.11 Aligned_cols=35 Identities=31% Similarity=0.495 Sum_probs=32.5
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34689999999999999999999999999999987
No 311
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.14 E-value=0.00086 Score=61.84 Aligned_cols=33 Identities=30% Similarity=0.612 Sum_probs=31.2
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999986
No 312
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.11 E-value=0.00037 Score=66.54 Aligned_cols=36 Identities=28% Similarity=0.453 Sum_probs=33.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
..+|++|||+|++|+.+|.+|.+.|.+|+++|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999999999999999863
No 313
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.08 E-value=0.00028 Score=68.22 Aligned_cols=35 Identities=40% Similarity=0.550 Sum_probs=32.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKER-GVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~ 43 (395)
..+|+||||||.||+.+|.+|.+. +++|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999986 78999999986
No 314
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.06 E-value=0.00043 Score=66.05 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=33.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLA 46 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~ 46 (395)
.+|++|||+|++|+.+|.+|.+.|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987543
No 315
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.06 E-value=0.0008 Score=62.51 Aligned_cols=33 Identities=33% Similarity=0.500 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 316
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.04 E-value=0.00046 Score=66.76 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 469999999999999999999999999999987
No 317
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.97 E-value=0.0019 Score=59.57 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=31.2
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-+|+|||+|.+|+-+|..|++.|.+|++++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 379999999999999999999999999999976
No 318
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.94 E-value=0.00028 Score=68.03 Aligned_cols=36 Identities=36% Similarity=0.394 Sum_probs=32.5
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCCc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-RGVPSLIIEKESCL 45 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-~g~~v~lie~~~~~ 45 (395)
.+|+||||||.+|+.+|.+|++ .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999 58999999997543
No 319
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.93 E-value=0.0046 Score=59.87 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=31.6
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|.+|+..|..+++.|.+|+++++.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3479999999999999999999999999999887
No 320
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.91 E-value=0.0016 Score=50.23 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=32.9
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+..+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 345689999999999999999999999999999975
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.91 E-value=0.0032 Score=61.10 Aligned_cols=34 Identities=32% Similarity=0.477 Sum_probs=31.9
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 5689999999999999999999999999999875
No 322
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.86 E-value=0.0032 Score=61.07 Aligned_cols=33 Identities=24% Similarity=0.487 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|..|+++|..+++.|.+|.++++++
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 479999999999999999999999999999874
No 323
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.83 E-value=0.00061 Score=65.61 Aligned_cols=37 Identities=30% Similarity=0.342 Sum_probs=33.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKER-GVPSLIIEKESCL 45 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~~~ 45 (395)
+.+|++|||+|++|+.+|.+|.+. |.+|+++|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 458999999999999999999998 8999999998543
No 324
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.80 E-value=0.00071 Score=62.61 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=32.3
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
+.-+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45689999999999999999999999999999987
No 325
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.78 E-value=0.0018 Score=50.00 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=31.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999875
No 326
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.76 E-value=0.0014 Score=58.82 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=31.1
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999999999999999999999999886
No 327
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.75 E-value=0.00088 Score=65.06 Aligned_cols=35 Identities=40% Similarity=0.485 Sum_probs=32.5
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKE-RGVPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~-~g~~v~lie~~~~ 44 (395)
.+|++|||+|++|+.+|.+|.+ .|.+|+++|+...
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 4899999999999999999999 7999999999854
No 328
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.74 E-value=0.007 Score=57.57 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=30.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~ 43 (395)
..++|+|||+|.+|+-++..|++. +.+|+++-|..
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 357899999999999999999986 57899999875
No 329
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.72 E-value=0.0019 Score=62.50 Aligned_cols=33 Identities=27% Similarity=0.555 Sum_probs=30.7
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|..|++.|..+++.|.+|.++++++
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 469999999999999999999999999999874
No 330
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.66 E-value=0.0036 Score=59.80 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=31.1
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999886
No 331
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.63 E-value=0.0057 Score=58.80 Aligned_cols=34 Identities=32% Similarity=0.451 Sum_probs=31.4
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3479999999999999999999999999999876
No 332
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.62 E-value=0.004 Score=60.36 Aligned_cols=34 Identities=29% Similarity=0.565 Sum_probs=31.3
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.-.|+|||+|..|+++|..+++.|.+|.++++++
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3479999999999999999999999999999874
No 333
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.58 E-value=0.0098 Score=54.53 Aligned_cols=32 Identities=28% Similarity=0.476 Sum_probs=30.6
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 69999999999999999999999999999887
No 334
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.56 E-value=0.0071 Score=58.06 Aligned_cols=34 Identities=35% Similarity=0.555 Sum_probs=31.8
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999987
No 335
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.53 E-value=0.0066 Score=58.70 Aligned_cols=33 Identities=42% Similarity=0.623 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-.|..+++.|.+|+++++.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 369999999999999999999999999999886
No 336
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.45 E-value=0.0058 Score=50.95 Aligned_cols=36 Identities=25% Similarity=0.422 Sum_probs=32.5
Q ss_pred CCCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEec
Q 039923 169 EFRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRD 204 (395)
Q Consensus 169 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 204 (395)
...+++|+|||+|.+|...+..|.+.|++|+++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 347899999999999999999999999999998653
No 337
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.42 E-value=0.0041 Score=57.05 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=31.1
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999987
No 338
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.42 E-value=0.0015 Score=62.10 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
....|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44579999999999999999999999999999987
No 339
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.40 E-value=0.0026 Score=47.17 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=31.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERG-VPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g-~~v~lie~~~ 43 (395)
++.+|+|+|+|..|..++..|.+.| ++|+++++..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3468999999999999999999999 8999999864
No 340
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.39 E-value=0.004 Score=55.97 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.5
Q ss_pred CeEEEECCCcCHHHHHHHHhh---CCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCK---NGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~---~g~~V~~~~r~~ 205 (395)
.+|+|||+|.+|+-+|..|++ .|.+|+++++++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 369999999999999999999 899999999875
No 341
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.38 E-value=0.0015 Score=62.19 Aligned_cols=35 Identities=31% Similarity=0.461 Sum_probs=32.3
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
....|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34579999999999999999999999999999987
No 342
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.38 E-value=0.0041 Score=47.86 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=31.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|+|+|+|..|..+|..|.+.|++|+++|+..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 343
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.37 E-value=0.013 Score=55.78 Aligned_cols=33 Identities=30% Similarity=0.546 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 369999999999999999999999999999887
No 344
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.37 E-value=0.0038 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999875
No 345
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.31 E-value=0.0099 Score=57.53 Aligned_cols=34 Identities=24% Similarity=0.557 Sum_probs=31.5
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|..|+..|..+++.|.+|+++++.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 4479999999999999999999999999999886
No 346
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.23 E-value=0.0074 Score=56.59 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 369999999999999999999999999999987
No 347
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.16 E-value=0.0074 Score=47.23 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=30.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 579999999999999999999999999999863
No 348
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.13 E-value=0.014 Score=55.92 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=31.3
Q ss_pred CCeEEEECCCcCHHHHHHHHhh------------CCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCK------------NGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~------------~g~~V~~~~r~~ 205 (395)
..+|+|||||.+|.-+|..|++ .|.+|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999865
No 349
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.99 E-value=0.055 Score=52.46 Aligned_cols=32 Identities=22% Similarity=0.550 Sum_probs=30.4
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.|+|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 69999999999999999999999999999976
No 350
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.98 E-value=0.0062 Score=46.61 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999864
No 351
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.85 E-value=0.0079 Score=53.11 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|.|||+|.-|...|..++..|++|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 352
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.84 E-value=0.046 Score=52.38 Aligned_cols=32 Identities=25% Similarity=0.582 Sum_probs=29.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|..|+-.|..+++ |.+|+++++.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 369999999999999999999 99999999876
No 353
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.72 E-value=0.0054 Score=52.86 Aligned_cols=43 Identities=14% Similarity=0.084 Sum_probs=34.5
Q ss_pred CCCCCCCCCeEEEEecccccc--cchhhHHHHHHHHHhhhccccc
Q 039923 347 PKNWKGKNGVYSVGFARQGLL--GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 347 ~~~~~~~~~iya~Gd~~~~~~--~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
...+++.++||++||+..+.. .|+..|..+|+.|...|+.+..
T Consensus 288 ~~~~~~~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~e~~ 332 (336)
T 3kkj_A 288 GALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQLEHH 332 (336)
T ss_dssp SSEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC---
T ss_pred cceeeCCCCEEEEecccCCcCHHHHHHHHHHHHHHHHHHhhccCC
Confidence 344567899999999987665 8999999999999999987754
No 354
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.72 E-value=0.022 Score=53.61 Aligned_cols=31 Identities=23% Similarity=0.579 Sum_probs=29.0
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEec
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRD 204 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 204 (395)
.|+|||+|..|+-.|..+++.|.+|+++++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3899999999999999999999999999886
No 355
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.58 E-value=0.1 Score=50.87 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|..|+-.|..+++.|.+|.++++.+
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 369999999999999999999999999999875
No 356
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.57 E-value=0.014 Score=47.05 Aligned_cols=33 Identities=36% Similarity=0.396 Sum_probs=31.0
Q ss_pred CCeEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKER-GVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~-g~~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 5799999999999999999999 99999999875
No 357
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.57 E-value=0.012 Score=51.94 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999874
No 358
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.46 E-value=0.017 Score=48.11 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++|+|||||..|...|..|.+.|.+|++++++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4789999999999999999999999999999753
No 359
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.42 E-value=0.013 Score=54.89 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=32.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 5789999999999999999999999999999865
No 360
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.40 E-value=0.0062 Score=57.86 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
|+|+|||+|.+|+-.|..|++.|++|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999999876
No 361
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.40 E-value=0.015 Score=51.84 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=30.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
.+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999864
No 362
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.35 E-value=0.015 Score=51.50 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||+|.-|...|..|++.|++|+++|+.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 363
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.24 E-value=0.099 Score=50.78 Aligned_cols=32 Identities=19% Similarity=0.484 Sum_probs=30.1
Q ss_pred eEEEECCCcCHHHHHHHHhhCC--CeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNG--AQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~ 205 (395)
.|+|||+|..|+-+|..|++.| .+|+++++.+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 5999999999999999999999 9999999875
No 364
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.22 E-value=0.03 Score=53.09 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=33.9
Q ss_pred HHHcCCccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 94 ANHFEIEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 94 ~~~~~~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
+++.|++++.+++|++++..+ +...+.+.+ .++.+|.||+|+|.
T Consensus 267 l~~~GV~v~~~~~v~~i~~~~--~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 267 LERWGIDYVHIPNVKRVEGNE--KVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp HHHHTCEEEECSSEEEEECSS--SCCEEEETTCCEEECSEEEECCCE
T ss_pred HHhCCcEEEeCCeeEEEecCC--ceEEEEeCCCeEEEeCEEEECCCc
Confidence 445689999999999998654 333455655 78999999999994
No 365
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.21 E-value=0.017 Score=48.13 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=30.4
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999875
No 366
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.16 E-value=0.015 Score=54.16 Aligned_cols=37 Identities=24% Similarity=0.430 Sum_probs=33.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLA 46 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~ 46 (395)
.++|+|||.|.+|+++|..|.++|++|+++|.+....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 3689999999999999999999999999999976543
No 367
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.13 E-value=0.021 Score=51.72 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCcc
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCLA 46 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~~ 46 (395)
|++|+|||||..|..+++.+.+.|++++++|.++...
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 5889999999999999999999999999999876543
No 368
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.05 E-value=0.02 Score=50.73 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 369
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.01 E-value=0.019 Score=50.99 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=30.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|||+|..|...|..|.+.|++|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999864
No 370
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.95 E-value=0.028 Score=53.12 Aligned_cols=43 Identities=9% Similarity=0.124 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 1 MSSKAKRFWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 1 m~~~~~~~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
|.+.+...+..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 1 ~~~~~~~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 1 MGHHHHHHMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp --------CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCcccccCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4555556677899999999999999999999999999999875
No 371
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.90 E-value=0.027 Score=49.16 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=32.4
Q ss_pred CCCCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 8 FWTPGPVIVGA-GPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 8 ~~~~~vvIIG~-G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++.+|.|||+ |..|...|..|.+.|++|+++++..
T Consensus 9 ~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 9 VGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34568999999 9999999999999999999999864
No 372
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.79 E-value=0.025 Score=50.37 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=31.2
Q ss_pred CCCCeEEECCChHHHH-HHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLA-AAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~-~A~~l~~~g~~v~lie~~~ 43 (395)
.+++|.|||.|.+||+ +|..|.++|++|++.|+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3578999999999996 7888999999999999864
No 373
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.72 E-value=0.028 Score=49.27 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=31.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|||+|..|...|..|.+.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999974
No 374
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.71 E-value=0.014 Score=50.17 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+.|+|||||-.|...|..|.+.|.+|++++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999999864
No 375
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.56 E-value=0.039 Score=49.76 Aligned_cols=33 Identities=33% Similarity=0.344 Sum_probs=31.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 589999999999999999999999999999974
No 376
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.55 E-value=0.054 Score=47.72 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
++.+|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999875
No 377
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.55 E-value=0.03 Score=48.79 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 378
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.55 E-value=0.039 Score=51.26 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=32.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+.+|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 45789999999999999999999999999999875
No 379
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.41 E-value=0.024 Score=52.74 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=31.5
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.++|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 380
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.37 E-value=0.03 Score=50.42 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=32.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
...+|||+|||.+|+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34689999999999999999999999 999999873
No 381
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.37 E-value=0.032 Score=50.79 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=31.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|||+|..|+.+|..+...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 382
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.30 E-value=0.054 Score=44.96 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=30.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+.+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 383
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.29 E-value=0.023 Score=51.79 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=30.4
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.|+|||+|.+|+-+|..|++.|.+|++++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48999999999999999999999999999976
No 384
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.15 E-value=0.031 Score=50.44 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=31.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|||+|..|+.+|..+...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 385
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.10 E-value=0.041 Score=49.22 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=31.9
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+..+|.|||+|..|...|..|++.|++|+++++..
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456799999999999999999999999999999864
No 386
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.10 E-value=0.052 Score=42.35 Aligned_cols=36 Identities=22% Similarity=0.439 Sum_probs=33.0
Q ss_pred CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 170 FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 170 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+++++|+|+|..|..++..|...|.+|+++.|++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 357899999999999999999999999999998876
No 387
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.08 E-value=0.04 Score=48.63 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=30.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999864
No 388
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.08 E-value=0.043 Score=47.23 Aligned_cols=36 Identities=25% Similarity=0.590 Sum_probs=32.9
Q ss_pred CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 170 FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 170 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+++|+|||+|.+|...+..|.+.|++|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999999999999999999999997653
No 389
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.07 E-value=0.047 Score=50.40 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=32.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.|.+|.|||.|+.|+.+|..|++.|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 46789999999999999999999999999999874
No 390
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.07 E-value=0.032 Score=51.57 Aligned_cols=33 Identities=24% Similarity=0.454 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
++|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999875
No 391
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.05 E-value=0.041 Score=51.27 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=31.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 379999999999999999999999999999975
No 392
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.01 E-value=0.043 Score=48.12 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=32.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
..+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999999864
No 393
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.98 E-value=0.043 Score=46.76 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=30.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999874
No 394
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.92 E-value=0.053 Score=48.77 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=31.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKE 42 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~ 42 (395)
...+|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 79999987
No 395
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.90 E-value=0.053 Score=44.79 Aligned_cols=36 Identities=17% Similarity=0.080 Sum_probs=31.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
...+|.|||+|..|.+.|..|.+.|++|+++++...
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 346799999999999999999999999999998753
No 396
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.88 E-value=0.034 Score=51.42 Aligned_cols=32 Identities=31% Similarity=0.460 Sum_probs=30.5
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 69999999999999999999999999999975
No 397
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.85 E-value=0.056 Score=47.71 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=32.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+.+|.|||.|..|...|..|++.|++|+++|+..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35689999999999999999999999999999875
No 398
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.84 E-value=0.049 Score=48.27 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV--PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999998 999999864
No 399
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.79 E-value=0.068 Score=47.74 Aligned_cols=32 Identities=28% Similarity=0.278 Sum_probs=30.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKE 42 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~ 42 (395)
.+|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999985
No 400
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.79 E-value=0.049 Score=48.37 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||.|..|...|..|++.|++|+++|+..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999875
No 401
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.78 E-value=0.042 Score=50.27 Aligned_cols=33 Identities=27% Similarity=0.542 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999976
No 402
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.78 E-value=0.038 Score=50.09 Aligned_cols=43 Identities=9% Similarity=-0.094 Sum_probs=35.6
Q ss_pred CCCCC-CCCCeEEEEecccccc--cchhhHHHHHHHHHhhhccccc
Q 039923 347 PKNWK-GKNGVYSVGFARQGLL--GISMDAHKVADDIASQWNSETR 389 (395)
Q Consensus 347 ~~~~~-~~~~iya~Gd~~~~~~--~a~~~g~~~a~~i~~~~~~~~~ 389 (395)
+++++ ..+|+|++|..++... .|..||..++.|++..+.+++.
T Consensus 321 ~tle~k~~~~Lf~AGqi~G~~Gy~eAaa~Gl~AG~naa~~~~g~~p 366 (443)
T 3g5s_A 321 ETLEFREAEGLYAAGVLAGVEGYLESAATGFLAGLNAARKALGLPP 366 (443)
T ss_dssp TTSEETTEEEEEECGGGGTBCSHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhceecCCCCEEECccccccHHHHHHHHhHHHHHHHHHHHhcCCCC
Confidence 44554 6899999999988866 9999999999999999877653
No 403
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.76 E-value=0.052 Score=47.08 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=31.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
|+.+|+|.|+|..|..++.+|.++|++|+++.+..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 45789999999999999999999999999999875
No 404
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.75 E-value=0.057 Score=47.05 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=31.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||.|..|...|..|++.|++|+++|+..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999875
No 405
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.75 E-value=0.059 Score=47.98 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=31.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
..+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999999998 999999864
No 406
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.73 E-value=0.021 Score=44.03 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=30.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|||+|..|..+|..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 407
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.70 E-value=0.074 Score=47.66 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGA-GPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~-G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|+|+|| |..|..++..|.+.|++|+++.|..
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 368999999 9999999999999999999999975
No 408
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.69 E-value=0.058 Score=50.09 Aligned_cols=37 Identities=22% Similarity=0.430 Sum_probs=33.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCc
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESCL 45 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~~ 45 (395)
..-+|.|||.|..|+.+|..|++.|++|+++|++...
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3468999999999999999999999999999998643
No 409
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.66 E-value=0.14 Score=45.38 Aligned_cols=35 Identities=29% Similarity=0.441 Sum_probs=29.7
Q ss_pred CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 170 FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 170 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
....+|.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 46789999999999999999999999999998 654
No 410
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.63 E-value=0.065 Score=41.69 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=31.7
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 35789999999999999999999999999999864
No 411
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.63 E-value=0.039 Score=49.71 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 412
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.63 E-value=0.039 Score=50.15 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3579999999999999999999999999999875
No 413
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.62 E-value=0.055 Score=47.12 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=30.7
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
+|.|||+|..|...|..|.+.|++|+++++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998763
No 414
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.58 E-value=0.067 Score=45.42 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=32.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
...+|.|||+|..|..+|..|.+.|++|+++++..
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999875
No 415
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.55 E-value=0.061 Score=48.54 Aligned_cols=34 Identities=29% Similarity=0.561 Sum_probs=31.2
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4579999999999999999999999999999864
No 416
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.55 E-value=0.069 Score=40.84 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=32.5
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..++++|+|.|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 46789999999999999999999999999999876
No 417
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.52 E-value=0.063 Score=47.22 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 418
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.52 E-value=0.035 Score=50.30 Aligned_cols=32 Identities=16% Similarity=0.404 Sum_probs=30.4
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 69999999999999999999999999999875
No 419
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.51 E-value=0.065 Score=47.28 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=30.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 579999999999999999999997 899999764
No 420
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.49 E-value=0.06 Score=47.25 Aligned_cols=35 Identities=17% Similarity=0.405 Sum_probs=30.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGV--PSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~ 43 (395)
.+.+|.|||+|..|..+|..|+..|+ +++|+|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 34789999999999999999999998 899999864
No 421
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.47 E-value=0.071 Score=47.06 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=30.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKE 42 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~ 42 (395)
..+|.|||+|..|..+|..|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3689999999999999999999999 99999986
No 422
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.44 E-value=0.071 Score=47.21 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
.+|.|||+|..|..+|..|++.|+ +|+++|+..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999864
No 423
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.43 E-value=0.065 Score=50.39 Aligned_cols=34 Identities=26% Similarity=0.570 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.-+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4589999999999999999999999999999874
No 424
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.39 E-value=0.045 Score=49.87 Aligned_cols=33 Identities=36% Similarity=0.554 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999999875
No 425
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.38 E-value=0.11 Score=48.58 Aligned_cols=36 Identities=36% Similarity=0.382 Sum_probs=33.1
Q ss_pred CCCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 170 FRASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 170 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+++|.|||.|.+|.-+|..|.+.|.+|+...+++
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 468999999999999999999999999999998765
No 426
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.36 E-value=0.094 Score=48.23 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=31.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|||.|..|..+|..|.+.|++|++||+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999984
No 427
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.36 E-value=0.064 Score=50.51 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER--GVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~--g~~v~lie~~~ 43 (395)
+.+|.|||.|..|+.+|..|++. |++|+++|++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 35899999999999999999999 78999999864
No 428
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.35 E-value=0.12 Score=45.81 Aligned_cols=33 Identities=36% Similarity=0.453 Sum_probs=30.4
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.+|.|||+|..|.-+|..|.+.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999998865
No 429
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.34 E-value=0.065 Score=47.22 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=29.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|||+|..|...|..|. .|.+|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999874
No 430
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.32 E-value=0.068 Score=46.60 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=31.1
Q ss_pred CCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 8 FWTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 8 ~~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
...++|.|||+|.-|...|..|+ .|++|+++|+.+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 34578999999999999999999 999999999875
No 431
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.30 E-value=0.087 Score=46.44 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=32.3
Q ss_pred CCCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 9 WTPGPVIVGA-GPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~-G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
++++|+|.|| |..|..++.+|.++|++|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3578999999 99999999999999999999998754
No 432
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.29 E-value=0.045 Score=51.84 Aligned_cols=35 Identities=26% Similarity=0.544 Sum_probs=32.4
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...+|+|||+|.+|+..|..|.+.|.+|+++++++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46789999999999999999999999999999875
No 433
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.28 E-value=0.056 Score=49.03 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=32.2
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEec
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRD 204 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 204 (395)
...+|+|||+|.+|+-+|..|.+.|.+|++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 5678999999999999999999999999999988
No 434
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.26 E-value=0.049 Score=51.21 Aligned_cols=33 Identities=33% Similarity=0.541 Sum_probs=31.0
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCC--eEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGA--QVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~--~V~~~~r~~ 205 (395)
++|+|||+|.+|+-.|..|++.|. +|+++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 579999999999999999999999 999999875
No 435
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.16 E-value=0.071 Score=49.90 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=32.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHc-CC-CEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKER-GV-PSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~-g~-~v~lie~~~~ 44 (395)
+.+|.|||+|..|+.+|..|++. |+ +|+++|++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35799999999999999999999 99 9999999875
No 436
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.16 E-value=0.081 Score=45.40 Aligned_cols=34 Identities=32% Similarity=0.479 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++++|||+|-+|.++|..|.+.|.+|+|++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 437
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.15 E-value=0.047 Score=49.61 Aligned_cols=33 Identities=30% Similarity=0.620 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 438
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.15 E-value=0.049 Score=49.64 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.8
Q ss_pred CeEEEECCCcCHHHHHHHHhhC--CCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKN--GAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 205 (395)
.+|+|||+|.+|+-+|..|++. |.+|+++++++
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3699999999999999999998 99999999976
No 439
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.14 E-value=0.049 Score=48.15 Aligned_cols=31 Identities=26% Similarity=0.232 Sum_probs=29.2
Q ss_pred CCeEEECCChHHHHHHHHHHHc-----C-CCEEEEec
Q 039923 11 PGPVIVGAGPSGLAAAACLKER-----G-VPSLIIEK 41 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~-----g-~~v~lie~ 41 (395)
-+|.|||+|..|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3799999999999999999999 9 99999998
No 440
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.11 E-value=0.049 Score=50.48 Aligned_cols=32 Identities=34% Similarity=0.523 Sum_probs=30.2
Q ss_pred eEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.|+|||+|.+|+-.|..|++.|.+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 69999999999999999999999999999865
No 441
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.10 E-value=0.052 Score=49.16 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=30.4
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999874
No 442
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.08 E-value=0.063 Score=49.41 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=31.4
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCe-EEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQ-VSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~-V~~~~r~~ 205 (395)
..|+|||+|.+|+-+|..|++.|.+ |+++++++
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5799999999999999999999999 99999987
No 443
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.07 E-value=0.079 Score=47.89 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=31.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|+|+|.+|..++..+...|.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 444
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.04 E-value=0.058 Score=49.83 Aligned_cols=35 Identities=20% Similarity=0.518 Sum_probs=32.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCC-CeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNG-AQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g-~~V~~~~r~~ 205 (395)
...+|+|||+|.+|+-.|..|++.| .+|+++++++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3568999999999999999999999 8999999876
No 445
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.02 E-value=0.074 Score=46.77 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=29.7
Q ss_pred CeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGV--PSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~ 43 (395)
+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999864
No 446
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.02 E-value=0.079 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=29.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
...+|.|||+|..|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4578999999999999999999999999999 653
No 447
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.97 E-value=0.084 Score=49.43 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||+|..|..+|..|++.|++|+++|+..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
No 448
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.94 E-value=0.039 Score=51.66 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=30.4
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+|+|+|+|-.|..+|..|.+.|++|++||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999999999999999984
No 449
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.93 E-value=0.13 Score=45.98 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|.|||.|..|-+.|..|.+.|++|+++|++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 450
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.92 E-value=0.081 Score=48.50 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|||+|..|+.+|..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 451
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.91 E-value=0.14 Score=44.37 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=31.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|+|.|+|..|..++..|.++|++|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 579999999999999999999999999999875
No 452
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.90 E-value=0.12 Score=45.30 Aligned_cols=35 Identities=34% Similarity=0.387 Sum_probs=32.0
Q ss_pred CCCCeEEEC-CChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVG-AGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG-~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
++.+|.||| +|..|.+.|..|.+.|++|+++++..
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 446899999 99999999999999999999999875
No 453
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.90 E-value=0.069 Score=50.40 Aligned_cols=35 Identities=29% Similarity=0.509 Sum_probs=32.1
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...+|+|||+|.+|+-.|..|.+.|.+|+++++++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 45689999999999999999999999999998875
No 454
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.89 E-value=0.073 Score=47.14 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=32.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERG-VPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g-~~v~lie~~~ 43 (395)
|+.+|.|||.|..|...|..|++.| ++|+++|+..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4568999999999999999999999 9999999875
No 455
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.89 E-value=0.083 Score=47.57 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 379999999999999999999999999999864
No 456
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.88 E-value=0.054 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.0
Q ss_pred CCCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+.|+|||+|.+|+-+|..|+ .|.+|+++++++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 4678999999999999999999 699999999875
No 457
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.88 E-value=0.059 Score=51.13 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=30.0
Q ss_pred CeEEEECCCcCHHHHHHHHhh-CCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCK-NGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~-~g~~V~~~~r~~ 205 (395)
-.|+|||+|.+|+-+|..|++ .|.+|+++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 369999999999999999987 499999999887
No 458
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.88 E-value=0.088 Score=46.70 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3689999999999999999999998 899999864
No 459
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.87 E-value=0.093 Score=46.46 Aligned_cols=42 Identities=21% Similarity=0.269 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 039923 1 MSSKAKRFWTPGPVIVGAGPSGLAAAACLKERGV--PSLIIEKES 43 (395)
Q Consensus 1 m~~~~~~~~~~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~ 43 (395)
|++..+.. ..+|+|||+|..|.++|..|+..++ ++.++|...
T Consensus 1 ~~~~~~~~-~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 1 MASITDKD-HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp ------CC-CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CcccccCC-CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 44444433 3689999999999999999999987 899999753
No 460
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.82 E-value=0.089 Score=45.40 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=31.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+.++|+|+|..|.++|..|++.|.+|++++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4679999999999999999999999999998864
No 461
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.82 E-value=0.066 Score=44.62 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=30.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEE-EecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLI-IEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~l-ie~~~ 43 (395)
+.+|.|||+|..|...|..|.+.|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 46899999999999999999999999999 77764
No 462
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.79 E-value=0.078 Score=46.56 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4679999999999999999999999999999874
No 463
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.79 E-value=0.08 Score=46.77 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=30.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKE 42 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~ 42 (395)
+.+|.|||.|..|...|..|.+.|+ +|+++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999995
No 464
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.73 E-value=0.085 Score=48.62 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=30.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+.+|.|||.|..|+.+|..|++ |++|+++|+..
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3479999999999999999998 99999999875
No 465
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.73 E-value=0.088 Score=47.86 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=31.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-------CCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERG-------VPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g-------~~v~lie~~~~ 44 (395)
+.+|.|||+|..|...|..|++.| ++|+++++...
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 457999999999999999999999 99999998764
No 466
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.71 E-value=0.1 Score=46.32 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=30.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999764
No 467
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.70 E-value=0.093 Score=47.86 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=31.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|||+|..|+.++..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 468
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.69 E-value=0.088 Score=48.04 Aligned_cols=33 Identities=36% Similarity=0.594 Sum_probs=30.9
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.+|+|||+|.+|+-+|..|.+.|.+|+++++++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 479999999999999999999999999999875
No 469
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=92.67 E-value=0.13 Score=42.59 Aligned_cols=35 Identities=17% Similarity=0.104 Sum_probs=31.0
Q ss_pred CCCCeEEECC-ChHHHHHHHHHH-HcCCCEEEEecCC
Q 039923 9 WTPGPVIVGA-GPSGLAAAACLK-ERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~-G~aG~~~A~~l~-~~g~~v~lie~~~ 43 (395)
|++.|+|.|| |..|..+|..|+ +.|++|+++.+..
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3456999996 999999999999 8999999999874
No 470
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.66 E-value=0.13 Score=43.57 Aligned_cols=33 Identities=12% Similarity=0.259 Sum_probs=30.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC----CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV----PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~----~v~lie~~~ 43 (395)
.+|.|||+|..|...|..|.+.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999874
No 471
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.66 E-value=0.081 Score=40.39 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=31.5
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5689999999999999999999999999998876
No 472
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.61 E-value=0.16 Score=44.76 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=30.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 473
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.61 E-value=0.076 Score=49.29 Aligned_cols=34 Identities=26% Similarity=0.487 Sum_probs=31.5
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCC-eEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGA-QVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~ 205 (395)
...|+|||+|..|+-+|..|++.|. +|+++++.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3479999999999999999999999 999999986
No 474
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.60 E-value=0.11 Score=43.54 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.4
Q ss_pred CCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGA-GPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~-G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++|+|.|| |..|..++.+|+++|++|+++.|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 467999999 9999999999999999999999874
No 475
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.59 E-value=0.13 Score=48.31 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999875
No 476
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.59 E-value=0.14 Score=45.15 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=32.0
Q ss_pred CCCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGA-GPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~-G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
|+++|+|+|| |..|..++..|.+.|++|+++.|..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 4578999997 9999999999999999999999875
No 477
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.58 E-value=0.1 Score=45.39 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=30.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.+|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999975
No 478
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.54 E-value=0.14 Score=45.83 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=30.6
Q ss_pred CCCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGA-GPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~-G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..++|+|.|| |..|..++..|+++|++|+++++..
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3478999999 9999999999999999999999875
No 479
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.52 E-value=0.12 Score=44.71 Aligned_cols=34 Identities=18% Similarity=0.100 Sum_probs=31.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
.++++|||+|-+|.++|..|.+.|. +|++++|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 999999875
No 480
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.50 E-value=0.099 Score=45.43 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
..+|+|||+|-.|..+|..|++.|. +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3689999999999999999999998 899999864
No 481
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.50 E-value=0.062 Score=49.21 Aligned_cols=34 Identities=24% Similarity=0.523 Sum_probs=31.3
Q ss_pred CCeEEEECCCcCHHHHHHHHhh-CC-CeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCK-NG-AQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~-~g-~~V~~~~r~~ 205 (395)
...|+|||+|.+|+-+|..|++ .| .+|+++++.+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3579999999999999999999 89 9999999876
No 482
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.50 E-value=0.067 Score=48.03 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=29.8
Q ss_pred eEEEECCCcCHHHHHHHHhhCC------CeEEEEEecC
Q 039923 174 KVLVVGCGNSGMEISFDLCKNG------AQVSLVVRDK 205 (395)
Q Consensus 174 ~v~VvG~G~~a~e~a~~l~~~g------~~V~~~~r~~ 205 (395)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999987 8999999875
No 483
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.50 E-value=0.18 Score=47.61 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHcC-CccccCceEEEEEEcCCCCcEEEEEcc-EEEEeCEEEEeeCC
Q 039923 84 QQFITYMEAYANHFE-IEPLLGQEVQWAKYDAAMGHWRVKTHE-YEFMCRWLIVATGE 139 (395)
Q Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~~V~~v~~~~~~~~~~v~~~~-~~~~~d~lVlAtG~ 139 (395)
..+.+.+.+.+.+.+ ++++++++|++++..+ +.+.|++.+ +++.+|+||+|+|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECS--SSEEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEEEEEECCCCEEEcCEEEECCCH
Confidence 345566666666666 7799999999999876 567888776 68999999999995
No 484
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.50 E-value=0.097 Score=46.16 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=29.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERG--VPSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g--~~v~lie~~~ 43 (395)
.+|+|||+|..|..+|..|++.| .+|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 6899999864
No 485
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.49 E-value=0.14 Score=46.75 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=32.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
.++|+|||+|..|..++..+.+.|++|+++|....
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 46899999999999999999999999999998754
No 486
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.46 E-value=0.11 Score=51.33 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=31.6
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
...|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4689999999999999999999999999999864
No 487
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.45 E-value=0.074 Score=46.59 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=29.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
|.++|-+||-|.-|...|.+|.+.|++|+++|+...
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 446899999999999999999999999999998763
No 488
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.44 E-value=0.1 Score=39.56 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=30.4
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
+.+++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999998765
No 489
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.37 E-value=0.32 Score=43.16 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=31.1
Q ss_pred CCCeEEEECCCcCHHH-HHHHHhhCCCeEEEEEecC
Q 039923 171 RASKVLVVGCGNSGME-ISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 171 ~~~~v~VvG~G~~a~e-~a~~l~~~g~~V~~~~r~~ 205 (395)
..++|.|||.|.+|+. +|..|.+.|.+|+...+++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3578999999999997 8889999999999998765
No 490
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.34 E-value=0.17 Score=46.02 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=32.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKESC 44 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~~ 44 (395)
..++|+|||+|.-|..++..+.+.|++|+++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 347899999999999999999999999999998754
No 491
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.33 E-value=0.091 Score=48.47 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=31.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 9 WTPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 9 ~~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
...++.|||.|..|+.+|..|++.|++|+++|++.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999999985
No 492
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.29 E-value=0.071 Score=49.84 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=31.3
Q ss_pred CeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 173 SKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 173 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..|+|||+|..|+-+|..|++.|++|+++++++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999986
No 493
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.28 E-value=0.13 Score=45.41 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=30.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV--PSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~ 43 (395)
+.+|+|||+|..|.++|..|+..+. ++.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998885 799999763
No 494
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.24 E-value=0.11 Score=44.30 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=30.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
..+|+|||+|..|..+|..|++.|. +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3689999999999999999999998 899999864
No 495
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.22 E-value=0.1 Score=48.72 Aligned_cols=34 Identities=24% Similarity=0.168 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
.++|+|||||..|...+..|.+.|.+|++++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4689999999999999999999999999999864
No 496
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.19 E-value=0.073 Score=50.73 Aligned_cols=34 Identities=32% Similarity=0.399 Sum_probs=31.4
Q ss_pred CCeEEEECCCcCHHHHHHHHhhCCCeEEEEEecC
Q 039923 172 ASKVLVVGCGNSGMEISFDLCKNGAQVSLVVRDK 205 (395)
Q Consensus 172 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 205 (395)
..+|+|||+|.+|+-.|..|++.|.+|+++++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 497
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.18 E-value=0.09 Score=48.87 Aligned_cols=32 Identities=31% Similarity=0.465 Sum_probs=30.1
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 498
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.15 E-value=0.13 Score=45.49 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=30.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 039923 11 PGPVIVGAGPSGLAAAACLKERGV--PSLIIEKES 43 (395)
Q Consensus 11 ~~vvIIG~G~aG~~~A~~l~~~g~--~v~lie~~~ 43 (395)
.+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 579999999999999999999997 899999753
No 499
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.13 E-value=0.18 Score=42.90 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=30.2
Q ss_pred CeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 039923 12 GPVIVGAGPSGLAAAACLKERGV-PSLIIEKES 43 (395)
Q Consensus 12 ~vvIIG~G~aG~~~A~~l~~~g~-~v~lie~~~ 43 (395)
+++|||+|-+|-+++..|.+.|. +|++++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 999999874
No 500
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.12 E-value=0.12 Score=46.74 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 039923 10 TPGPVIVGAGPSGLAAAACLKERGVPSLIIEKES 43 (395)
Q Consensus 10 ~~~vvIIG~G~aG~~~A~~l~~~g~~v~lie~~~ 43 (395)
..+|+|+|+|..|..+|..+...|.+|+++|+..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
Done!