BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039924
         (106 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8W453|DIR1_ARATH Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana
           GN=DIR1 PE=1 SV=1
          Length = 102

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 2/79 (2%)

Query: 27  AMAISICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAKLSCLCSYKN--LLPAFGIN 84
           ++AI +C +   ++N C PAVS ++PT P++ CC  +  A  +CLC YKN   L +FG++
Sbjct: 24  SVAIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVD 83

Query: 85  PKYALALPKKCGLETPPQC 103
           P+ A ALPK+CGL   P C
Sbjct: 84  PELASALPKQCGLANAPTC 102


>sp|P82007|NLTP1_HELAN Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1
           SV=2
          Length = 116

 Score = 34.3 bits (77), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 19/102 (18%)

Query: 8   VLVQRVVAFLFIASSVNGGAMAISICNIESSKMNLCLPAVSGKSPTQPTEQCCA------ 61
           +L   V+A L +  SV     AI+ CN  +  +  CLP +  +S  +PT  CCA      
Sbjct: 10  ILAMIVMAQLMVHPSV-----AIT-CNDVTGNLTPCLPYL--RSGGKPTPACCAGAKKLL 61

Query: 62  ----VVSGAKLSCLCSYKNLLPAFGINPKYALALPKKCGLET 99
                 +  + +C C+ K   P   + P  A +LP KCG+ T
Sbjct: 62  GATRTQADRRTACKCA-KTAAPQLKVRPDMASSLPGKCGIST 102


>sp|O24356|MEN8_SILLA Protein MEN-8 OS=Silene latifolia GN=MEN-8 PE=3 SV=1
          Length = 100

 Score = 32.7 bits (73), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 33 CNIESSKMNLCLP-AVSGKSPTQPTEQCCAVVSGAKLSCLCS 73
          C  +   +N+C P  V G   T P+++CCA +SG    C+C+
Sbjct: 38 CASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNHDCMCN 79


>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis
           thaliana GN=At1g27950 PE=1 SV=1
          Length = 193

 Score = 32.0 bits (71), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 11/76 (14%)

Query: 33  CNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAKL---SCLC-------SYKNLLPAFG 82
           CN +  K+ LCL   +GK+ T P+++CC  V   K     CLC       +    L   G
Sbjct: 35  CNQDFQKVTLCLDFATGKA-TIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLG 93

Query: 83  INPKYALALPKKCGLE 98
           +     + LP  C L 
Sbjct: 94  VQEDKLIQLPTSCQLH 109


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.133    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,018,876
Number of Sequences: 539616
Number of extensions: 1309665
Number of successful extensions: 2399
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2380
Number of HSP's gapped (non-prelim): 61
length of query: 106
length of database: 191,569,459
effective HSP length: 75
effective length of query: 31
effective length of database: 151,098,259
effective search space: 4684046029
effective search space used: 4684046029
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)