Query 039924
Match_columns 106
No_of_seqs 104 out of 1027
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 04:49:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rkn_A DIR1 protein, AT5G48485 99.8 1.1E-20 3.9E-25 116.5 1.3 74 30-103 2-77 (77)
2 2ljo_A Non-specific lipid-tran 99.7 1.5E-19 5E-24 115.4 -0.8 70 30-101 1-80 (93)
3 1siy_A LTP 1, NS-LTP1, nonspec 99.7 3.5E-18 1.2E-22 108.4 -0.6 68 31-101 1-79 (91)
4 1afh_A Maize nonspecific lipid 99.7 4.5E-18 1.6E-22 108.3 -0.4 69 31-101 2-81 (93)
5 1bwo_A NS-LTP1, nonspecific li 99.7 4.9E-18 1.7E-22 107.6 -0.4 68 31-101 1-79 (90)
6 2alg_A Non-specific lipid tran 99.6 9E-18 3.1E-22 106.8 -1.5 68 31-101 2-80 (92)
7 1t12_A LTP 1, nonspecific lipi 99.6 1.1E-17 3.7E-22 106.3 -1.7 67 31-101 2-79 (91)
8 1l6h_A LTP2, non-specific lipi 99.6 4.8E-17 1.6E-21 98.5 -0.5 67 32-104 2-69 (69)
9 1n89_A Lipid transfer protein; 99.6 8.4E-17 2.9E-21 96.9 0.1 61 39-103 6-67 (67)
10 3ob4_A Conglutin, maltose ABC 96.3 0.00011 3.9E-09 57.2 -4.4 48 57-104 429-489 (500)
11 1sm7_A Recombinant IB pronapin 96.2 0.0006 2E-08 43.8 -0.7 65 40-104 15-105 (109)
12 1pnb_B Napin BNIB; napin IA an 95.8 0.0011 3.6E-08 40.0 -0.6 51 54-104 9-71 (75)
13 2lvf_A 2S albumin; allergen, c 95.4 0.00094 3.2E-08 43.4 -2.1 64 39-103 17-105 (114)
14 1hyp_A Hydrophobic protein fro 95.4 0.0076 2.6E-07 36.8 2.0 62 39-105 10-79 (80)
15 1s6d_A Albumin 8; all helix, f 95.1 0.013 4.6E-07 37.2 2.7 74 30-104 8-102 (103)
16 2ds2_B Sweet protein mabinlin- 95.1 0.0019 6.5E-08 38.7 -1.2 49 56-104 7-68 (72)
17 1hss_A 0.19 alpha-amylase inhi 94.3 0.0033 1.1E-07 41.5 -1.7 62 39-100 16-104 (124)
18 1b1u_A Protein (alpha-amylase/ 93.7 0.0041 1.4E-07 40.9 -2.2 62 39-100 16-108 (122)
19 1w2q_A Conglutin, ARA H 6; all 93.0 0.02 7E-07 37.7 0.3 74 30-103 13-117 (127)
20 1psy_A 2S albumin, RICC3; albu 92.3 0.015 5.1E-07 38.2 -1.1 67 31-97 16-116 (125)
21 1bea_A Bifunctional amylase/se 91.5 0.062 2.1E-06 35.4 1.2 62 39-100 16-109 (127)
No 1
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.79 E-value=1.1e-20 Score=116.54 Aligned_cols=74 Identities=46% Similarity=1.073 Sum_probs=63.3
Q ss_pred cCCChhhhccccCCHHhhcCCCCCCCchhHHHHhhccCCcccccccC--CcccCCCCHHHHhhcccccCCCCCCCC
Q 039924 30 ISICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAKLSCLCSYKN--LLPAFGINPKYALALPKKCGLETPPQC 103 (106)
Q Consensus 30 ~~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~~~ClC~l~~--~~~~~~in~~~a~~Lp~~Cg~~~p~~C 103 (106)
+.+|+++...|.||++|++++...+||++||+++|+.|+.|+|.+.. ...+++||+++|.+||++||+++|++|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 77 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence 46799999999999999998433589999999999888999997433 245558999999999999999999988
No 2
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.73 E-value=1.5e-19 Score=115.42 Aligned_cols=70 Identities=30% Similarity=0.591 Sum_probs=60.3
Q ss_pred cCCChhhhccccCCHHhhcCCCCCCCchhHHHHhhcc--------CCccccc-ccCCcccC-CCCHHHHhhcccccCCCC
Q 039924 30 ISICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGA--------KLSCLCS-YKNLLPAF-GINPKYALALPKKCGLET 99 (106)
Q Consensus 30 ~~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~~~ClC~-l~~~~~~~-~in~~~a~~Lp~~Cg~~~ 99 (106)
+.+|+++...|.||++|++|++ .|++.||++++++ ||+|+|+ |++....+ +||.++|..||++||+++
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~--~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~ 78 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGP--GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNI 78 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSS--CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHhHHHHHcCCC--CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCC
Confidence 4689999999999999999874 6899999999997 4677777 88855555 799999999999999998
Q ss_pred CC
Q 039924 100 PP 101 (106)
Q Consensus 100 p~ 101 (106)
||
T Consensus 79 p~ 80 (93)
T 2ljo_A 79 PY 80 (93)
T ss_dssp SS
T ss_pred CC
Confidence 85
No 3
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.67 E-value=3.5e-18 Score=108.44 Aligned_cols=68 Identities=31% Similarity=0.590 Sum_probs=58.9
Q ss_pred CCChhhhccccCCHHhhcCCCCCCCchhHHHHhhcc--------CC--cccccccCCcccC-CCCHHHHhhcccccCCCC
Q 039924 31 SICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGA--------KL--SCLCSYKNLLPAF-GINPKYALALPKKCGLET 99 (106)
Q Consensus 31 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~~--~ClC~l~~~~~~~-~in~~~a~~Lp~~Cg~~~ 99 (106)
.+|+++...|.||++|+++++ +|+++||++++++ |+ .|+| +++...++ +||+++|++||++||+++
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~--~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC-~k~~~~~~~~in~~~A~~LP~~Cgv~~ 77 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGG--VVPPSCCTGVKNILNSSRTTADRRAVCSC-LKAAAGAVRGINPNNAEALPGKCGVNI 77 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCS--CCCHHHHHHHHHHHTTTCSSHHHHHHHHH-HHHHTTCCSSCCHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHhccCcHHHHhCCC--CCcHHHHHHHHHHHhhhccCCCCCcCCcc-cCCcccccCCcCHHHHHHHHHHcCCCC
Confidence 369999999999999999876 3999999999996 33 5999 77766667 799999999999999998
Q ss_pred CC
Q 039924 100 PP 101 (106)
Q Consensus 100 p~ 101 (106)
||
T Consensus 78 p~ 79 (91)
T 1siy_A 78 PY 79 (91)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 4
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.66 E-value=4.5e-18 Score=108.33 Aligned_cols=69 Identities=29% Similarity=0.658 Sum_probs=59.1
Q ss_pred CCChhhhccccCCHHhhcCCCCCCCchhHHHHhhccC--------C--cccccccCCcccC-CCCHHHHhhcccccCCCC
Q 039924 31 SICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAK--------L--SCLCSYKNLLPAF-GINPKYALALPKKCGLET 99 (106)
Q Consensus 31 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~--------~--~ClC~l~~~~~~~-~in~~~a~~Lp~~Cg~~~ 99 (106)
.+|+++...|.||++|+++++ ..|+++||++++++. + .|+| ++.....+ +||+++|..||++||+++
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~-~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC-~~~~~~~~~~in~~~A~~LP~~C~v~~ 79 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQG-SGPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAAAGVSGLNAGNAASIPSKCGVSI 79 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSC-CSCCHHHHHHHHHHHHHCCSSHHHHHHHHH-HHHHHTTSTTCCHHHHHHHHHHHHCCC
T ss_pred CChHHHHHhccCcHHHHcCCC-CCChHHHHHHHHHHHHhhcCCCCCcccCEe-eccccccccCcCHHHHHHHHHHcCCCC
Confidence 679999999999999999875 478889999999982 2 5999 76644556 899999999999999998
Q ss_pred CC
Q 039924 100 PP 101 (106)
Q Consensus 100 p~ 101 (106)
||
T Consensus 80 p~ 81 (93)
T 1afh_A 80 PY 81 (93)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 5
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.66 E-value=4.9e-18 Score=107.61 Aligned_cols=68 Identities=31% Similarity=0.623 Sum_probs=58.7
Q ss_pred CCChhhhccccCCHHhhcCCCCCCCchhHHHHhhccC----------CcccccccCCcccC-CCCHHHHhhcccccCCCC
Q 039924 31 SICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAK----------LSCLCSYKNLLPAF-GINPKYALALPKKCGLET 99 (106)
Q Consensus 31 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~----------~~ClC~l~~~~~~~-~in~~~a~~Lp~~Cg~~~ 99 (106)
.+|+++...|.||++|+++++ +|+++||+++|++. ..|+| +++...++ +||+++|.+||++||+++
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~--~Ps~~CC~~lk~l~~~a~t~~dr~~~ClC-lk~~~~~~~~in~~~A~~LP~~C~v~~ 77 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGP--GPSGQCCDGVKNLHNQARSQSDRQSACNC-LKGIARGIHNLNEDNARSIPPKCGVNL 77 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCS--CCCHHHHHHHHHHHHHCCSHHHHHHHHHH-HHHHHTTCTTCCHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHhhcccHHHHcCCC--CCCHHHhHHHHHHHhhccCCCCCCccCcC-ccCchhccCCcCHHHHHHHHHHcCCCC
Confidence 369999999999999999886 39999999999963 25999 87766666 799999999999999998
Q ss_pred CC
Q 039924 100 PP 101 (106)
Q Consensus 100 p~ 101 (106)
||
T Consensus 78 p~ 79 (90)
T 1bwo_A 78 PY 79 (90)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.63 E-value=9e-18 Score=106.76 Aligned_cols=68 Identities=35% Similarity=0.730 Sum_probs=57.9
Q ss_pred CCChhhhccccCCHHhhcCCCCCCCchhHHHHhhcc--------C--CcccccccCCcccC-CCCHHHHhhcccccCCCC
Q 039924 31 SICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGA--------K--LSCLCSYKNLLPAF-GINPKYALALPKKCGLET 99 (106)
Q Consensus 31 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~--~~ClC~l~~~~~~~-~in~~~a~~Lp~~Cg~~~ 99 (106)
.+|+++...|.||++|+++++ +|+++||+++|++ | ..|+| +++....+ +||+++|.+||++||+++
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~p~~~CC~~lk~l~~~a~t~~d~~~~ClC-~~~~~~~~~~in~~~A~~LP~~Cgv~~ 78 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGG--AVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLSASVPGVNPNNAAALPGKCGVSI 78 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCS--CCCHHHHHHHHHHHHHCCSHHHHHHHHHH-HHHHHHHSTTCCHHHHHHHHHHTTCCC
T ss_pred CChHHHHHhccCcHHHHcCCC--CCCHHHHHHHHHHHhhhcccCCCCcCCcc-ccCcccccCccChHHHHHHHHHcCCCC
Confidence 579999999999999999875 5888999999996 3 35999 55544555 899999999999999998
Q ss_pred CC
Q 039924 100 PP 101 (106)
Q Consensus 100 p~ 101 (106)
||
T Consensus 79 p~ 80 (92)
T 2alg_A 79 PY 80 (92)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 7
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.63 E-value=1.1e-17 Score=106.26 Aligned_cols=67 Identities=30% Similarity=0.608 Sum_probs=57.8
Q ss_pred CCChhhhccccCCHHhhcCCCCCCCchhHHHHhhccC----------CcccccccCCcccC-CCCHHHHhhcccccCCCC
Q 039924 31 SICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAK----------LSCLCSYKNLLPAF-GINPKYALALPKKCGLET 99 (106)
Q Consensus 31 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~----------~~ClC~l~~~~~~~-~in~~~a~~Lp~~Cg~~~ 99 (106)
.+|+++...|.||++|+++++ . |+ +||++++++. ..|+| +++...++ +||+++|+.||++||+++
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~-~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC-lk~~~~~~~~in~~~A~~LP~~C~v~~ 77 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTG-P-LG-RCCGGVKALVNSARTTEDRQIACTC-LKSAAGAISGINLGKAAGLPSTCGVNI 77 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSS-C-CT-THHHHHHHHHHTTCSTHHHHHHHHH-HHHHHHHCTTCCHHHHHHHHHHTTCCC
T ss_pred CChHHHHHhccCcHHHHcCCC-C-hH-HHHHHHHHHHhhccCCCCCCccCCC-ccccccccCCcChhHHHHHHHHcCCCC
Confidence 579999999999999999886 3 87 9999999962 25999 77755566 899999999999999998
Q ss_pred CC
Q 039924 100 PP 101 (106)
Q Consensus 100 p~ 101 (106)
||
T Consensus 78 p~ 79 (91)
T 1t12_A 78 PY 79 (91)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 8
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.60 E-value=4.8e-17 Score=98.45 Aligned_cols=67 Identities=27% Similarity=0.640 Sum_probs=54.9
Q ss_pred CChhhhccccCCHHhhcCCCCCCCchhHHHHhhccCCccccc-ccCCcccCCCCHHHHhhcccccCCCCCCCCC
Q 039924 32 ICNIESSKMNLCLPAVSGKSPTQPTEQCCAVVSGAKLSCLCS-YKNLLPAFGINPKYALALPKKCGLETPPQCR 104 (106)
Q Consensus 32 ~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~~~ClC~-l~~~~~~~~in~~~a~~Lp~~Cg~~~p~~C~ 104 (106)
+|+.. .|.||++|+++++ +||++||++||+. ..|+|+ +++.....+||.++|.+||++||+++| +|+
T Consensus 2 ~C~~~--~L~pC~~~v~~~~--~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P-~C~ 69 (69)
T 1l6h_A 2 GCNAG--QLTVCTGAIAGGA--RPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-TCH 69 (69)
T ss_dssp CSTTT--THHHHHHHHTTCC--STTHHHHHHHHHH-HHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSC-CCC
T ss_pred CCChh--hcccCHHHHcCCC--CCCHHHHHhhCCC-CCCCCccccCcccccccCHHHHHHHHHHcCCCCC-CCC
Confidence 46544 7899999999874 6999999999985 779999 555432236999999999999999987 885
No 9
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.59 E-value=8.4e-17 Score=96.88 Aligned_cols=61 Identities=25% Similarity=0.603 Sum_probs=51.6
Q ss_pred cccCCHHhhcCCCCCCCchhHHHHhhccCCccccc-ccCCcccCCCCHHHHhhcccccCCCCCCCC
Q 039924 39 KMNLCLPAVSGKSPTQPTEQCCAVVSGAKLSCLCS-YKNLLPAFGINPKYALALPKKCGLETPPQC 103 (106)
Q Consensus 39 ~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~~~ClC~-l~~~~~~~~in~~~a~~Lp~~Cg~~~p~~C 103 (106)
+|.||++|+++++ +||++||++||+. ..|+|+ +++.....+||.++|++||++||+++| +|
T Consensus 6 ~L~pC~~~v~~~~--~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P-~C 67 (67)
T 1n89_A 6 QLAVCASAILSGA--KPSGECCGNLRAQ-QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP-HC 67 (67)
T ss_dssp TTHHHHHHHTTCC--CCCHHHHHHHHHH-SSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCS-CC
T ss_pred hcccCHHHHcCCC--CCCHHHHHhhCCC-CCCCCccccCcccccccCHHHHHHHHHHcCCCCC-CC
Confidence 7899999999874 6999999999985 789998 556433236999999999999999987 66
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=96.28 E-value=0.00011 Score=57.16 Aligned_cols=48 Identities=25% Similarity=0.714 Sum_probs=35.4
Q ss_pred hhHHHHhhccC--Cccccc-ccCCccc---------C-CCCHHHHhhcccccCCCCCCCCC
Q 039924 57 EQCCAVVSGAK--LSCLCS-YKNLLPA---------F-GINPKYALALPKKCGLETPPQCR 104 (106)
Q Consensus 57 ~~CC~~l~~~~--~~ClC~-l~~~~~~---------~-~in~~~a~~Lp~~Cg~~~p~~C~ 104 (106)
..||+.++..+ .+|+|+ |+....+ . ..=..+|..||..||+..|..|.
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c~ 489 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCD 489 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCCC
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccCC
Confidence 67999999997 689999 6653221 0 11145699999999999776784
No 11
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=96.17 E-value=0.0006 Score=43.82 Aligned_cols=65 Identities=22% Similarity=0.462 Sum_probs=43.7
Q ss_pred ccCCHHhhcC----CCC-CCC---------chhHHHHhhccCCccccc-ccCCccc------CC-----CCHHHHhhccc
Q 039924 40 MNLCLPAVSG----KSP-TQP---------TEQCCAVVSGAKLSCLCS-YKNLLPA------FG-----INPKYALALPK 93 (106)
Q Consensus 40 l~~C~~yl~~----~~~-~~P---------s~~CC~~l~~~~~~ClC~-l~~~~~~------~~-----in~~~a~~Lp~ 93 (106)
|.+|..|+.- ... ..| -..||+.++.++..|.|. |+..... ++ -...+|..||.
T Consensus 15 L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP~ 94 (109)
T 1sm7_A 15 LRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPN 94 (109)
T ss_dssp CSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHHH
T ss_pred HHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCHH
Confidence 8899999972 111 111 357999999999899998 6542211 11 13456788999
Q ss_pred ccCCCCCCCCC
Q 039924 94 KCGLETPPQCR 104 (106)
Q Consensus 94 ~Cg~~~p~~C~ 104 (106)
.||+..+-.|.
T Consensus 95 ~Cnl~~~~~C~ 105 (109)
T 1sm7_A 95 VCNMKQIGTCP 105 (109)
T ss_dssp HSCCCSSCSSC
T ss_pred hcCCCCCCCCC
Confidence 99998554563
No 12
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=95.84 E-value=0.0011 Score=40.05 Aligned_cols=51 Identities=25% Similarity=0.501 Sum_probs=37.1
Q ss_pred CCchhHHHHhhccCCccccc-ccCCcc------cCC-----CCHHHHhhcccccCCCCCCCCC
Q 039924 54 QPTEQCCAVVSGAKLSCLCS-YKNLLP------AFG-----INPKYALALPKKCGLETPPQCR 104 (106)
Q Consensus 54 ~Ps~~CC~~l~~~~~~ClC~-l~~~~~------~~~-----in~~~a~~Lp~~Cg~~~p~~C~ 104 (106)
..-..||+.++.++..|.|. |+..+. .++ -...+|..||..||+..+-.|.
T Consensus 9 ~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C~ 71 (75)
T 1pnb_B 9 WLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCP 71 (75)
T ss_dssp SCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCCC
T ss_pred HHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCCC
Confidence 44578999999999999999 655321 111 1356788999999998665664
No 13
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=95.43 E-value=0.00094 Score=43.38 Aligned_cols=64 Identities=23% Similarity=0.558 Sum_probs=43.4
Q ss_pred cccCCHHhhcC----CCC-CCCc-------hhHHHHhhccCCccccc-ccCCccc----C-CC-------CHHHHhhccc
Q 039924 39 KMNLCLPAVSG----KSP-TQPT-------EQCCAVVSGAKLSCLCS-YKNLLPA----F-GI-------NPKYALALPK 93 (106)
Q Consensus 39 ~l~~C~~yl~~----~~~-~~Ps-------~~CC~~l~~~~~~ClC~-l~~~~~~----~-~i-------n~~~a~~Lp~ 93 (106)
.|..|..||.. ... ..+. ..||+.++.++..|.|. |+..+.. + .+ -+.+|..||+
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~ 96 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS 96 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence 57899999862 211 1111 34999999999999999 6553221 1 11 2568999999
Q ss_pred ccCCCCCCCC
Q 039924 94 KCGLETPPQC 103 (106)
Q Consensus 94 ~Cg~~~p~~C 103 (106)
.||+. |-.|
T Consensus 97 ~C~i~-p~~C 105 (114)
T 2lvf_A 97 RCNLS-PMRC 105 (114)
T ss_dssp HHCCC-CSCC
T ss_pred hcCCC-cccC
Confidence 99998 4456
No 14
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=95.36 E-value=0.0076 Score=36.81 Aligned_cols=62 Identities=26% Similarity=0.715 Sum_probs=43.4
Q ss_pred cccCCHHhhcCCCCCCCchhHHHHhhccC----Cccccc-ccCCcccCCCCHHHHhh-cccccCCCCC--CCCCC
Q 039924 39 KMNLCLPAVSGKSPTQPTEQCCAVVSGAK----LSCLCS-YKNLLPAFGINPKYALA-LPKKCGLETP--PQCRG 105 (106)
Q Consensus 39 ~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~----~~ClC~-l~~~~~~~~in~~~a~~-Lp~~Cg~~~p--~~C~~ 105 (106)
+|.-|.+-+.|.. .|...||.-++.+. ..|+|. +| . -.+ +|.+-..+ |...||...| |+|..
T Consensus 10 kLgvCanvL~g~~--~~~~~CC~Ll~GL~dleAAvCLCtaik-~-Lgi-lnlpv~L~llln~Cgk~~P~gF~C~~ 79 (80)
T 1hyp_A 10 DLSICLNILGGSL--GTVDDCCALIGGLGDIEAIVCLCIQLR-A-LGI-LNLNRNLQLILNSCGRSYPSNATCPR 79 (80)
T ss_dssp CCGGGGGGGGTCC--TTHHHHHHHHHTSCHHHHHHHHHHHHH-H-HTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred chhHHHHHhCcCC--CCCCccchhhhCcchhhhhhhhhhhcc-c-cce-eecChhHHHHHHHhCCcCcCCCCCCC
Confidence 5778888775432 37788999999973 259997 55 1 123 46665555 5578999987 78964
No 15
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=95.13 E-value=0.013 Score=37.20 Aligned_cols=74 Identities=20% Similarity=0.399 Sum_probs=50.0
Q ss_pred cCCChhhh--cc-ccCCHHhhcCCC----CC-------CCchhHHHHhhccCCccccc-ccCCc-ccC-C----CCHHHH
Q 039924 30 ISICNIES--SK-MNLCLPAVSGKS----PT-------QPTEQCCAVVSGAKLSCLCS-YKNLL-PAF-G----INPKYA 88 (106)
Q Consensus 30 ~~~C~~~~--~~-l~~C~~yl~~~~----~~-------~Ps~~CC~~l~~~~~~ClC~-l~~~~-~~~-~----in~~~a 88 (106)
...|...+ .. |.+|..|+.... +. ..-..||+.++.++..|.|. |+..+ ..+ + -...+|
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A 87 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMA 87 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHH
Confidence 34577655 24 899999997421 11 23477999999999999999 65533 112 1 135578
Q ss_pred hhcccccCCCCCCCCC
Q 039924 89 LALPKKCGLETPPQCR 104 (106)
Q Consensus 89 ~~Lp~~Cg~~~p~~C~ 104 (106)
..||..||++. -.|.
T Consensus 88 ~~LP~~C~i~p-~~C~ 102 (103)
T 1s6d_A 88 HNLPIECNLMS-QPCQ 102 (103)
T ss_dssp HHHHHHTTSSS-SCSC
T ss_pred HhcHHhcCCCc-ccCC
Confidence 99999999973 3463
No 16
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=95.12 E-value=0.0019 Score=38.69 Aligned_cols=49 Identities=20% Similarity=0.438 Sum_probs=36.1
Q ss_pred chhHHHHhhccCCccccc-ccCCcc------c-C-----CCCHHHHhhcccccCCCCCCCCC
Q 039924 56 TEQCCAVVSGAKLSCLCS-YKNLLP------A-F-----GINPKYALALPKKCGLETPPQCR 104 (106)
Q Consensus 56 s~~CC~~l~~~~~~ClC~-l~~~~~------~-~-----~in~~~a~~Lp~~Cg~~~p~~C~ 104 (106)
-..||+.++.++..|.|. |+..+. . + .=...+|..||..||+..|-.|.
T Consensus 7 ~qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C~ 68 (72)
T 2ds2_B 7 LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACP 68 (72)
T ss_dssp HHHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCCC
T ss_pred HHHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcCC
Confidence 467999999999999999 655331 1 1 12467889999999998555564
No 17
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=94.34 E-value=0.0033 Score=41.45 Aligned_cols=62 Identities=19% Similarity=0.438 Sum_probs=41.1
Q ss_pred cccCCHHhhcCC--CCCCC---chhHHHHhhccCCccccc-ccCCcc----cCC-----------------CCHHHHhhc
Q 039924 39 KMNLCLPAVSGK--SPTQP---TEQCCAVVSGAKLSCLCS-YKNLLP----AFG-----------------INPKYALAL 91 (106)
Q Consensus 39 ~l~~C~~yl~~~--~~~~P---s~~CC~~l~~~~~~ClC~-l~~~~~----~~~-----------------in~~~a~~L 91 (106)
.|..|..||... +...| ...||+.++.++..|.|. |...+. .++ .-...|..|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~L 95 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAASI 95 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTTH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHhc
Confidence 467899999622 11123 467999999999999998 644221 001 112268899
Q ss_pred ccccCCCCC
Q 039924 92 PKKCGLETP 100 (106)
Q Consensus 92 p~~Cg~~~p 100 (106)
|..||++.+
T Consensus 96 P~~Cnl~~~ 104 (124)
T 1hss_A 96 TAVCRLPIV 104 (124)
T ss_dssp HHHTTCCEE
T ss_pred hhhcCCCCC
Confidence 999999865
No 18
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=93.73 E-value=0.0041 Score=40.87 Aligned_cols=62 Identities=23% Similarity=0.454 Sum_probs=41.3
Q ss_pred cccCCHHhhcCC----CCCCC----chhHHHHhhccCCccccc-ccCCc----c--------cCCC--------CHHHHh
Q 039924 39 KMNLCLPAVSGK----SPTQP----TEQCCAVVSGAKLSCLCS-YKNLL----P--------AFGI--------NPKYAL 89 (106)
Q Consensus 39 ~l~~C~~yl~~~----~~~~P----s~~CC~~l~~~~~~ClC~-l~~~~----~--------~~~i--------n~~~a~ 89 (106)
.|..|.+||... ++..| -..||+.++.++..|.|. |...+ . .++. -...|.
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A~ 95 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAP 95 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHGG
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHHH
Confidence 467899999532 22234 356999999999899998 54321 1 0111 113688
Q ss_pred hc--ccccCCCCC
Q 039924 90 AL--PKKCGLETP 100 (106)
Q Consensus 90 ~L--p~~Cg~~~p 100 (106)
.| |..||++.+
T Consensus 96 ~Lv~P~~Cnl~~~ 108 (122)
T 1b1u_A 96 KLVTEVECNLATI 108 (122)
T ss_dssp GTTSTTTTCCCCT
T ss_pred hcCCcccCCCCCC
Confidence 89 999999865
No 19
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=92.98 E-value=0.02 Score=37.71 Aligned_cols=74 Identities=16% Similarity=0.574 Sum_probs=49.2
Q ss_pred cCCChhhh--ccccCCHHhhcCCC--CC-------CC-------chhHHHHhhcc--CCccccc-ccCCc----ccC-C-
Q 039924 30 ISICNIES--SKMNLCLPAVSGKS--PT-------QP-------TEQCCAVVSGA--KLSCLCS-YKNLL----PAF-G- 82 (106)
Q Consensus 30 ~~~C~~~~--~~l~~C~~yl~~~~--~~-------~P-------s~~CC~~l~~~--~~~ClC~-l~~~~----~~~-~- 82 (106)
...|...+ ..|.+|..|+.... .. .. -..||+.|+.+ +..|.|. |+..+ ..+ +
T Consensus 13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gq 92 (127)
T 1w2q_A 13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDR 92 (127)
T ss_dssp TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTS
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhH
Confidence 34577654 35899999997421 00 01 25699999999 8999999 65533 112 1
Q ss_pred -CC---HHHHhhcccccCCCCCCCC
Q 039924 83 -IN---PKYALALPKKCGLETPPQC 103 (106)
Q Consensus 83 -in---~~~a~~Lp~~Cg~~~p~~C 103 (106)
.. ..+|..||..||++-|-.|
T Consensus 93 q~~~~~~q~A~~LP~~C~i~~~~~C 117 (127)
T 1w2q_A 93 QMVQQFKRELMSLPQQCNFRAPQRC 117 (127)
T ss_dssp TTHHHHHHHHHHHHHHHTCCCSSCC
T ss_pred HHHHHHHHHHHHhHHhcCCCCCCcC
Confidence 22 4678999999999544445
No 20
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=92.30 E-value=0.015 Score=38.24 Aligned_cols=67 Identities=24% Similarity=0.496 Sum_probs=46.7
Q ss_pred CCChhhh--ccccCCHHhhcCCC-CC--------CC-----------chhHHHHhhccCCccccc-ccCCcc------cC
Q 039924 31 SICNIES--SKMNLCLPAVSGKS-PT--------QP-----------TEQCCAVVSGAKLSCLCS-YKNLLP------AF 81 (106)
Q Consensus 31 ~~C~~~~--~~l~~C~~yl~~~~-~~--------~P-----------s~~CC~~l~~~~~~ClC~-l~~~~~------~~ 81 (106)
..|...+ ..|.+|..||.... .. .| -..||+.++.++..|.|. |+..+. .+
T Consensus 16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~ 95 (125)
T 1psy_A 16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQL 95 (125)
T ss_dssp SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhh
Confidence 3587765 46899999997521 00 12 256999999999999999 755331 11
Q ss_pred -C----CCHHHHhhcccccCC
Q 039924 82 -G----INPKYALALPKKCGL 97 (106)
Q Consensus 82 -~----in~~~a~~Lp~~Cg~ 97 (106)
+ =-..+|..||..||+
T Consensus 96 ~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 96 HGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp CTTCSHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhhHHHcCC
Confidence 1 135678999999998
No 21
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=91.46 E-value=0.062 Score=35.42 Aligned_cols=62 Identities=23% Similarity=0.482 Sum_probs=41.4
Q ss_pred cccCCHHhhcCC----CCCCC----chhHHHHhhccCCccccc-ccCCcc----c---------CCCC--------HHHH
Q 039924 39 KMNLCLPAVSGK----SPTQP----TEQCCAVVSGAKLSCLCS-YKNLLP----A---------FGIN--------PKYA 88 (106)
Q Consensus 39 ~l~~C~~yl~~~----~~~~P----s~~CC~~l~~~~~~ClC~-l~~~~~----~---------~~in--------~~~a 88 (106)
.|..|..||... ++..| ...||+.++.++..|.|. |...+. . ++.- ...|
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~A 95 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFA 95 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHHH
Confidence 467899999522 22233 345999999999999998 543210 0 1111 3468
Q ss_pred hhc--ccccCCCCC
Q 039924 89 LAL--PKKCGLETP 100 (106)
Q Consensus 89 ~~L--p~~Cg~~~p 100 (106)
..| |..||++.+
T Consensus 96 ~~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 96 ATLVTEAECNLATI 109 (127)
T ss_dssp TTTTSTTTTCCCCT
T ss_pred HhcCCcccCCCCCC
Confidence 999 999999865
Done!