Query 039925
Match_columns 549
No_of_seqs 666 out of 3967
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 03:24:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039925.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039925hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 6.3E-58 1.4E-62 522.5 37.5 200 270-484 516-797 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.4E-30 9.6E-35 293.7 18.7 306 2-318 29-349 (968)
3 KOG4194 Membrane glycoprotein 99.9 2.2E-29 4.8E-34 248.3 2.5 270 60-338 81-415 (873)
4 KOG4194 Membrane glycoprotein 99.9 1E-27 2.2E-32 236.6 6.4 267 59-334 54-360 (873)
5 KOG0444 Cytoskeletal regulator 99.9 3E-28 6.4E-33 241.8 -1.4 290 48-352 46-377 (1255)
6 KOG0444 Cytoskeletal regulator 99.9 5E-27 1.1E-31 233.2 -1.2 292 49-354 95-407 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 1.3E-26 2.8E-31 219.6 -3.8 260 48-320 82-476 (565)
8 KOG1187 Serine/threonine prote 99.9 2.4E-22 5.3E-27 200.9 11.7 142 392-542 72-354 (361)
9 KOG0472 Leucine-rich repeat pr 99.9 2.6E-24 5.7E-29 204.0 -8.4 249 48-314 59-310 (565)
10 PRK15370 E3 ubiquitin-protein 99.8 1.3E-20 2.7E-25 203.2 15.7 294 2-351 63-429 (754)
11 KOG4237 Extracellular matrix p 99.8 3.4E-22 7.4E-27 189.5 -2.7 291 36-353 51-362 (498)
12 PLN03210 Resistant to P. syrin 99.8 2.7E-19 5.9E-24 205.7 19.2 80 250-334 779-865 (1153)
13 KOG0618 Serine/threonine phosp 99.8 3E-22 6.4E-27 208.2 -5.6 288 48-350 82-489 (1081)
14 PRK15387 E3 ubiquitin-protein 99.8 2.8E-19 6.1E-24 191.6 15.0 247 58-351 202-459 (788)
15 KOG0197 Tyrosine kinases [Sign 99.8 1E-19 2.2E-24 180.5 7.9 141 394-543 205-464 (468)
16 PLN03210 Resistant to P. syrin 99.8 3.1E-18 6.8E-23 196.9 18.5 106 56-165 610-715 (1153)
17 PRK15370 E3 ubiquitin-protein 99.8 7.6E-19 1.7E-23 189.5 11.2 231 48-314 192-428 (754)
18 KOG0618 Serine/threonine phosp 99.8 2.3E-20 5E-25 194.3 -2.8 238 56-313 44-322 (1081)
19 PRK15387 E3 ubiquitin-protein 99.8 2.6E-18 5.7E-23 184.2 12.6 228 48-319 215-463 (788)
20 KOG1026 Nerve growth factor re 99.8 7.1E-19 1.5E-23 183.1 6.4 147 394-545 485-767 (774)
21 KOG0192 Tyrosine kinase specif 99.7 3.4E-18 7.4E-23 169.9 8.8 144 394-546 40-309 (362)
22 KOG0617 Ras suppressor protein 99.7 3.7E-19 8E-24 150.4 -1.9 162 79-299 31-194 (264)
23 KOG0617 Ras suppressor protein 99.7 2.9E-19 6.2E-24 151.1 -3.6 140 53-198 29-170 (264)
24 KOG4237 Extracellular matrix p 99.7 2.9E-19 6.3E-24 169.7 -6.4 260 47-314 80-359 (498)
25 cd00116 LRR_RI Leucine-rich re 99.7 2E-18 4.4E-23 172.4 -0.8 245 50-315 16-292 (319)
26 cd00116 LRR_RI Leucine-rich re 99.7 2.8E-18 6.1E-23 171.4 -0.3 247 48-313 42-319 (319)
27 KOG1095 Protein tyrosine kinas 99.7 2.7E-17 5.8E-22 177.6 6.9 147 394-545 691-966 (1025)
28 KOG0196 Tyrosine kinase, EPH ( 99.7 1.9E-17 4.1E-22 169.6 3.6 135 398-542 632-893 (996)
29 KOG0193 Serine/threonine prote 99.7 6.7E-17 1.5E-21 161.7 6.7 141 393-544 390-657 (678)
30 KOG4278 Protein tyrosine kinas 99.7 5.6E-17 1.2E-21 161.9 5.9 140 394-542 266-525 (1157)
31 KOG0194 Protein tyrosine kinas 99.6 4.4E-16 9.6E-21 157.1 7.6 144 392-545 154-425 (474)
32 PLN03150 hypothetical protein; 99.6 1.1E-15 2.3E-20 164.5 10.9 151 2-167 372-528 (623)
33 KOG4257 Focal adhesion tyrosin 99.6 2.7E-15 5.9E-20 150.3 8.8 139 393-542 387-651 (974)
34 PF07714 Pkinase_Tyr: Protein 99.6 1.4E-15 3.1E-20 147.1 3.2 76 400-484 4-120 (259)
35 cd05064 PTKc_EphR_A10 Catalyti 99.5 8.2E-15 1.8E-19 142.3 7.6 81 394-484 4-124 (266)
36 KOG4721 Serine/threonine prote 99.5 2.3E-14 5E-19 142.3 8.5 142 392-544 121-372 (904)
37 KOG1025 Epidermal growth facto 99.5 5.9E-15 1.3E-19 152.2 3.4 135 397-542 698-959 (1177)
38 cd05148 PTKc_Srm_Brk Catalytic 99.5 5.2E-14 1.1E-18 136.2 7.1 84 392-484 3-121 (261)
39 cd05033 PTKc_EphR Catalytic do 99.5 7E-14 1.5E-18 135.7 7.9 81 394-484 3-123 (266)
40 KOG0581 Mitogen-activated prot 99.5 4.8E-14 1E-18 134.2 6.1 80 394-484 78-195 (364)
41 cd05114 PTKc_Tec_Rlk Catalytic 99.5 8.2E-14 1.8E-18 134.4 7.4 80 395-484 4-117 (256)
42 cd05102 PTKc_VEGFR3 Catalytic 99.4 1.4E-13 3E-18 138.7 8.1 35 508-542 302-336 (338)
43 cd05063 PTKc_EphR_A2 Catalytic 99.4 2.2E-13 4.7E-18 132.4 7.7 82 393-484 3-124 (268)
44 PHA02988 hypothetical protein; 99.4 3.5E-13 7.7E-18 132.1 9.0 77 401-484 26-139 (283)
45 KOG1094 Discoidin domain recep 99.4 9.9E-14 2.1E-18 138.4 4.6 139 393-540 536-804 (807)
46 cd05072 PTKc_Lyn Catalytic dom 99.4 2.4E-13 5.3E-18 131.5 7.1 83 393-484 4-120 (261)
47 KOG0199 ACK and related non-re 99.4 9.5E-14 2.1E-18 141.1 3.9 133 395-537 110-369 (1039)
48 cd05096 PTKc_DDR1 Catalytic do 99.4 3.2E-13 6.9E-18 133.9 7.4 86 394-484 4-155 (304)
49 cd05052 PTKc_Abl Catalytic dom 99.4 3.5E-13 7.5E-18 130.6 7.4 82 394-484 5-121 (263)
50 cd05104 PTKc_Kit Catalytic dom 99.4 2.2E-13 4.7E-18 139.1 6.3 32 509-540 343-374 (375)
51 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.4 2.8E-13 6.1E-18 132.2 6.6 53 422-484 82-134 (274)
52 cd05111 PTK_HER3 Pseudokinase 99.4 4.9E-13 1.1E-17 130.8 8.3 80 394-484 6-126 (279)
53 KOG2052 Activin A type IB rece 99.4 5.6E-13 1.2E-17 129.3 7.8 83 395-484 211-325 (513)
54 KOG0195 Integrin-linked kinase 99.4 1.1E-13 2.5E-18 125.6 2.9 77 399-484 194-306 (448)
55 cd05105 PTKc_PDGFR_alpha Catal 99.4 4.6E-13 1E-17 137.3 7.4 35 508-542 365-399 (400)
56 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.4 1E-12 2.2E-17 128.9 9.5 83 394-484 3-125 (284)
57 cd05108 PTKc_EGFR Catalytic do 99.4 4.4E-13 9.5E-18 133.7 6.7 80 394-484 6-126 (316)
58 cd05048 PTKc_Ror Catalytic Dom 99.4 7.4E-13 1.6E-17 129.8 7.9 86 394-484 4-141 (283)
59 cd05089 PTKc_Tie1 Catalytic do 99.4 1.2E-12 2.5E-17 129.4 8.8 85 395-484 2-136 (297)
60 cd05036 PTKc_ALK_LTK Catalytic 99.4 8.4E-13 1.8E-17 129.0 7.7 88 392-484 3-133 (277)
61 cd05107 PTKc_PDGFR_beta Cataly 99.4 8.1E-13 1.8E-17 135.5 7.7 33 509-541 368-400 (401)
62 KOG1024 Receptor-like protein 99.4 6.7E-13 1.5E-17 126.5 6.5 147 394-544 283-559 (563)
63 KOG0532 Leucine-rich repeat (L 99.4 1.6E-14 3.4E-19 143.8 -4.7 212 61-312 54-271 (722)
64 cd05062 PTKc_IGF-1R Catalytic 99.4 6.5E-13 1.4E-17 129.8 6.7 88 392-484 3-136 (277)
65 cd05113 PTKc_Btk_Bmx Catalytic 99.4 6.4E-13 1.4E-17 128.2 6.3 80 395-484 4-117 (256)
66 cd05094 PTKc_TrkC Catalytic do 99.4 1.1E-12 2.4E-17 129.2 8.1 86 394-484 4-140 (291)
67 cd05066 PTKc_EphR_A Catalytic 99.4 1.1E-12 2.3E-17 127.5 7.7 81 394-484 3-123 (267)
68 KOG0532 Leucine-rich repeat (L 99.4 3.9E-14 8.5E-19 141.0 -2.5 199 54-288 72-271 (722)
69 cd05082 PTKc_Csk Catalytic dom 99.4 1.2E-12 2.6E-17 126.3 7.7 83 394-484 5-119 (256)
70 cd05088 PTKc_Tie2 Catalytic do 99.4 1.5E-12 3.2E-17 129.0 8.5 89 391-484 3-141 (303)
71 cd05059 PTKc_Tec_like Catalyti 99.4 1E-12 2.2E-17 126.7 7.2 80 395-484 4-117 (256)
72 cd05035 PTKc_Axl_like Catalyti 99.4 1.5E-12 3.3E-17 126.7 8.3 88 397-484 1-130 (273)
73 cd05075 PTKc_Axl Catalytic dom 99.4 1.7E-12 3.7E-17 126.4 8.5 88 397-484 1-129 (272)
74 cd05045 PTKc_RET Catalytic dom 99.4 2.1E-12 4.5E-17 127.1 9.1 84 396-484 1-144 (290)
75 cd08228 STKc_Nek6 Catalytic do 99.3 2.4E-12 5.3E-17 124.9 9.3 83 395-484 2-123 (267)
76 cd05098 PTKc_FGFR1 Catalytic d 99.3 1.7E-12 3.7E-17 128.8 8.1 87 393-484 16-157 (307)
77 cd05050 PTKc_Musk Catalytic do 99.3 1.5E-12 3.3E-17 128.0 7.6 88 392-484 2-147 (288)
78 cd05093 PTKc_TrkB Catalytic do 99.3 1.7E-12 3.8E-17 127.5 8.0 86 394-484 4-137 (288)
79 cd08224 STKc_Nek6_Nek7 Catalyt 99.3 3.6E-12 7.8E-17 123.6 9.9 84 394-484 1-123 (267)
80 cd05039 PTKc_Csk_like Catalyti 99.3 1.8E-12 3.9E-17 125.0 7.7 83 393-484 4-119 (256)
81 cd05068 PTKc_Frk_like Catalyti 99.3 1.6E-12 3.5E-17 125.8 7.1 83 393-484 4-120 (261)
82 cd05084 PTKc_Fes Catalytic dom 99.3 2.3E-12 4.9E-17 124.0 7.9 74 401-484 1-111 (252)
83 cd05106 PTKc_CSF-1R Catalytic 99.3 1.4E-12 2.9E-17 133.1 6.6 33 509-541 341-373 (374)
84 cd05109 PTKc_HER2 Catalytic do 99.3 2.1E-12 4.5E-17 126.4 7.6 80 394-484 6-126 (279)
85 cd05065 PTKc_EphR_B Catalytic 99.3 1.9E-12 4.1E-17 125.9 7.3 80 395-484 4-123 (269)
86 cd05101 PTKc_FGFR2 Catalytic d 99.3 2.3E-12 4.9E-17 127.8 7.9 87 393-484 13-154 (304)
87 cd05053 PTKc_FGFR Catalytic do 99.3 2.1E-12 4.5E-17 127.3 7.4 87 393-484 10-149 (293)
88 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.3 1.4E-12 3.1E-17 126.0 6.1 74 401-484 1-117 (258)
89 cd05047 PTKc_Tie Catalytic dom 99.3 3.6E-12 7.8E-17 124.0 8.9 79 401-484 1-129 (270)
90 cd05034 PTKc_Src_like Catalyti 99.3 3.1E-12 6.7E-17 123.7 8.1 83 393-484 4-120 (261)
91 cd05061 PTKc_InsR Catalytic do 99.3 2.4E-12 5.2E-17 126.6 7.3 88 392-484 3-136 (288)
92 cd05115 PTKc_Zap-70 Catalytic 99.3 3E-12 6.5E-17 123.6 7.7 72 402-484 2-112 (257)
93 cd05070 PTKc_Fyn_Yrk Catalytic 99.3 3.6E-12 7.9E-17 123.2 8.2 82 393-484 4-119 (260)
94 cd05056 PTKc_FAK Catalytic dom 99.3 2.9E-12 6.3E-17 124.7 7.5 80 394-484 5-124 (270)
95 cd08229 STKc_Nek7 Catalytic do 99.3 5.5E-12 1.2E-16 122.4 9.3 83 395-484 2-123 (267)
96 cd05058 PTKc_Met_Ron Catalytic 99.3 4.1E-12 8.9E-17 122.9 8.4 75 401-484 1-115 (262)
97 cd08529 STKc_FA2-like Catalyti 99.3 3.5E-12 7.6E-17 122.9 7.8 80 396-484 1-118 (256)
98 cd05116 PTKc_Syk Catalytic dom 99.3 3E-12 6.4E-17 123.6 7.2 46 433-484 67-112 (257)
99 cd05043 PTK_Ryk Pseudokinase d 99.3 3.4E-12 7.3E-17 124.9 7.6 88 393-484 4-134 (280)
100 cd05071 PTKc_Src Catalytic dom 99.3 5.2E-12 1.1E-16 122.3 8.8 82 393-484 4-119 (262)
101 cd05103 PTKc_VEGFR2 Catalytic 99.3 3.6E-12 7.9E-17 128.6 7.9 33 510-542 309-341 (343)
102 cd05085 PTKc_Fer Catalytic dom 99.3 4.4E-12 9.5E-17 121.8 7.8 74 401-484 1-110 (250)
103 cd05100 PTKc_FGFR3 Catalytic d 99.3 4.3E-12 9.2E-17 127.6 7.9 85 395-484 12-151 (334)
104 cd05077 PTK_Jak1_rpt1 Pseudoki 99.3 4.9E-12 1.1E-16 122.5 7.7 53 422-484 70-122 (262)
105 cd05099 PTKc_FGFR4 Catalytic d 99.3 5.5E-12 1.2E-16 125.6 8.3 87 393-484 10-151 (314)
106 COG4886 Leucine-rich repeat (L 99.3 4.4E-12 9.6E-17 130.5 7.8 199 84-320 96-296 (394)
107 cd05060 PTKc_Syk_like Catalyti 99.3 4.7E-12 1E-16 122.2 7.5 72 401-484 1-112 (257)
108 cd05055 PTKc_PDGFR Catalytic d 99.3 5.3E-12 1.1E-16 125.0 8.0 84 392-484 32-158 (302)
109 KOG3653 Transforming growth fa 99.3 3.2E-12 6.9E-17 125.0 6.0 83 394-484 209-324 (534)
110 cd05069 PTKc_Yes Catalytic dom 99.3 7.2E-12 1.6E-16 121.2 8.5 80 395-484 6-119 (260)
111 cd05067 PTKc_Lck_Blk Catalytic 99.3 5E-12 1.1E-16 122.2 7.4 82 393-484 4-119 (260)
112 cd05097 PTKc_DDR_like Catalyti 99.3 4.2E-12 9E-17 125.3 6.9 86 394-484 4-146 (295)
113 cd05032 PTKc_InsR_like Catalyt 99.3 3.4E-12 7.4E-17 124.6 6.1 87 393-484 4-136 (277)
114 cd05083 PTKc_Chk Catalytic dom 99.3 3.8E-12 8.3E-17 122.6 6.2 80 395-484 6-117 (254)
115 cd05038 PTKc_Jak_rpt2 Catalyti 99.3 6.6E-12 1.4E-16 123.0 7.9 82 395-484 4-126 (284)
116 cd05079 PTKc_Jak1_rpt2 Catalyt 99.3 7.3E-12 1.6E-16 122.8 8.0 81 396-484 5-126 (284)
117 cd06624 STKc_ASK Catalytic dom 99.3 8.8E-12 1.9E-16 121.1 8.5 83 392-484 5-125 (268)
118 cd05092 PTKc_TrkA Catalytic do 99.3 6.3E-12 1.4E-16 123.0 7.5 86 394-484 4-139 (280)
119 KOG0580 Serine/threonine prote 99.3 4.9E-12 1.1E-16 113.4 5.9 83 393-484 20-141 (281)
120 cd05049 PTKc_Trk Catalytic dom 99.3 5.5E-12 1.2E-16 123.3 6.9 86 394-484 4-139 (280)
121 cd05090 PTKc_Ror1 Catalytic do 99.3 6E-12 1.3E-16 123.4 7.1 85 395-484 5-141 (283)
122 KOG0200 Fibroblast/platelet-de 99.3 5.9E-12 1.3E-16 135.5 7.7 143 393-540 294-579 (609)
123 cd05095 PTKc_DDR2 Catalytic do 99.3 7.7E-12 1.7E-16 123.5 7.8 86 394-484 4-147 (296)
124 cd06646 STKc_MAP4K5 Catalytic 99.3 1E-11 2.2E-16 120.6 8.4 81 393-484 7-123 (267)
125 cd05057 PTKc_EGFR_like Catalyt 99.3 7.8E-12 1.7E-16 122.3 7.6 80 394-484 6-126 (279)
126 cd05112 PTKc_Itk Catalytic dom 99.3 7.4E-12 1.6E-16 120.7 7.2 81 394-484 3-117 (256)
127 cd08528 STKc_Nek10 Catalytic d 99.3 7.9E-12 1.7E-16 121.5 7.3 82 396-484 1-130 (269)
128 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.3 1.3E-11 2.7E-16 120.1 8.7 78 401-484 1-117 (269)
129 PLN03150 hypothetical protein; 99.3 2.3E-11 4.9E-16 131.2 11.4 121 224-364 419-539 (623)
130 cd05054 PTKc_VEGFR Catalytic d 99.3 8.8E-12 1.9E-16 125.4 7.7 34 509-542 302-335 (337)
131 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.3 1.3E-11 2.9E-16 120.9 8.7 77 398-484 7-124 (283)
132 cd05110 PTKc_HER4 Catalytic do 99.3 7.9E-12 1.7E-16 123.9 7.0 81 393-484 5-126 (303)
133 cd05044 PTKc_c-ros Catalytic d 99.3 1.3E-11 2.8E-16 119.9 8.2 79 401-484 1-123 (269)
134 cd05051 PTKc_DDR Catalytic dom 99.2 1.5E-11 3.3E-16 121.3 8.7 87 393-484 3-147 (296)
135 cd05073 PTKc_Hck Catalytic dom 99.2 1.4E-11 3.1E-16 119.1 8.1 81 394-484 5-119 (260)
136 cd05086 PTKc_Aatyk2 Catalytic 99.2 2E-11 4.3E-16 118.6 9.2 76 402-484 2-116 (268)
137 cd05091 PTKc_Ror2 Catalytic do 99.2 7.1E-12 1.5E-16 122.8 6.0 85 395-484 5-141 (283)
138 cd08219 STKc_Nek3 Catalytic do 99.2 1.4E-11 3.1E-16 118.7 7.8 80 396-484 1-117 (255)
139 cd06637 STKc_TNIK Catalytic do 99.2 1.5E-11 3.2E-16 119.7 7.4 89 392-484 3-128 (272)
140 cd05046 PTK_CCK4 Pseudokinase 99.2 1.5E-11 3.3E-16 119.9 7.4 85 395-484 5-134 (275)
141 cd08225 STKc_Nek5 Catalytic do 99.2 1.3E-11 2.8E-16 119.0 6.1 80 396-484 1-118 (257)
142 cd06640 STKc_MST4 Catalytic do 99.2 5.2E-11 1.1E-15 116.3 10.5 78 395-484 4-118 (277)
143 cd06615 PKc_MEK Catalytic doma 99.2 3.5E-11 7.6E-16 119.5 8.8 79 395-484 1-116 (308)
144 cd00192 PTKc Catalytic domain 99.2 2.7E-11 5.9E-16 116.9 7.8 79 401-484 1-122 (262)
145 KOG0595 Serine/threonine-prote 99.2 3.1E-11 6.7E-16 116.4 7.8 82 392-484 7-126 (429)
146 cd08218 STKc_Nek1 Catalytic do 99.2 2.3E-11 5E-16 117.2 7.1 80 396-484 1-118 (256)
147 cd06642 STKc_STK25-YSK1 Cataly 99.2 2.3E-11 5E-16 118.8 7.1 77 396-484 5-118 (277)
148 KOG0575 Polo-like serine/threo 99.2 2.7E-11 5.9E-16 122.4 7.3 79 395-484 18-135 (592)
149 cd08220 STKc_Nek8 Catalytic do 99.2 2.7E-11 5.9E-16 116.6 7.1 80 396-484 1-118 (256)
150 cd06649 PKc_MEK2 Catalytic dom 99.2 3.9E-11 8.4E-16 120.5 8.4 80 394-484 4-120 (331)
151 cd06650 PKc_MEK1 Catalytic dom 99.2 3.3E-11 7.1E-16 121.1 7.6 81 393-484 3-120 (333)
152 cd05042 PTKc_Aatyk Catalytic d 99.2 4.3E-11 9.4E-16 116.3 8.1 77 402-484 2-117 (269)
153 cd06638 STKc_myosinIIIA Cataly 99.2 6.2E-11 1.3E-15 116.3 9.3 91 392-484 15-141 (286)
154 cd06620 PKc_MAPKK_Byr1_like Ca 99.2 2.4E-11 5.2E-16 119.2 6.2 80 394-484 4-120 (284)
155 cd05041 PTKc_Fes_like Catalyti 99.2 5.2E-11 1.1E-15 114.4 8.2 74 401-484 1-110 (251)
156 cd06631 STKc_YSK4 Catalytic do 99.2 5.2E-11 1.1E-15 115.5 7.7 78 396-484 1-119 (265)
157 COG4886 Leucine-rich repeat (L 99.2 4.3E-11 9.4E-16 123.1 7.5 192 61-290 97-290 (394)
158 cd06612 STKc_MST1_2 Catalytic 99.2 8.7E-11 1.9E-15 113.1 9.1 81 394-484 2-116 (256)
159 cd06641 STKc_MST3 Catalytic do 99.2 6.5E-11 1.4E-15 115.6 8.3 77 396-484 5-118 (277)
160 KOG1989 ARK protein kinase fam 99.1 9.8E-11 2.1E-15 123.4 9.2 146 393-542 35-313 (738)
161 cd05631 STKc_GRK4 Catalytic do 99.1 3.9E-11 8.4E-16 117.8 5.9 79 397-484 2-119 (285)
162 cd05074 PTKc_Tyro3 Catalytic d 99.1 7.4E-11 1.6E-15 114.9 7.8 88 397-484 1-130 (273)
163 cd06654 STKc_PAK1 Catalytic do 99.1 9.9E-11 2.1E-15 115.6 8.6 81 392-484 17-133 (296)
164 cd08221 STKc_Nek9 Catalytic do 99.1 9.9E-11 2.1E-15 112.8 8.2 80 396-484 1-118 (256)
165 KOG0201 Serine/threonine prote 99.1 1.8E-11 3.8E-16 119.0 2.7 80 394-484 12-128 (467)
166 cd06639 STKc_myosinIIIB Cataly 99.1 1E-10 2.2E-15 115.1 8.1 91 392-484 19-145 (291)
167 cd05037 PTK_Jak_rpt1 Pseudokin 99.1 1.1E-10 2.5E-15 112.5 8.3 73 401-484 1-118 (259)
168 cd08222 STKc_Nek11 Catalytic d 99.1 4.7E-11 1E-15 115.4 5.3 81 397-484 2-123 (260)
169 cd05605 STKc_GRK4_like Catalyt 99.1 5.4E-11 1.2E-15 116.7 5.7 79 397-484 2-119 (285)
170 cd06656 STKc_PAK3 Catalytic do 99.1 2.2E-10 4.8E-15 113.1 9.8 81 392-484 16-132 (297)
171 cd05607 STKc_GRK7 Catalytic do 99.1 7.5E-11 1.6E-15 115.2 6.3 73 403-484 1-112 (277)
172 cd06632 STKc_MEKK1_plant Catal 99.1 1.3E-10 2.8E-15 112.0 7.8 77 397-484 2-119 (258)
173 cd06917 STKc_NAK1_like Catalyt 99.1 1.9E-10 4.1E-15 112.3 9.0 77 396-484 2-118 (277)
174 cd05600 STKc_Sid2p_Dbf2p Catal 99.1 1.2E-10 2.6E-15 117.1 7.7 79 395-484 1-118 (333)
175 cd06611 STKc_SLK_like Catalyti 99.1 7.9E-11 1.7E-15 115.2 6.2 82 393-484 3-120 (280)
176 PLN00034 mitogen-activated pro 99.1 1.1E-10 2.4E-15 118.2 7.5 78 392-484 71-185 (353)
177 cd06622 PKc_MAPKK_PBS2_like Ca 99.1 9.8E-11 2.1E-15 114.9 6.7 82 395-484 1-119 (286)
178 PTZ00283 serine/threonine prot 99.1 7.1E-11 1.5E-15 124.7 5.9 91 392-484 29-160 (496)
179 cd05592 STKc_nPKC_theta_delta 99.1 1E-10 2.2E-15 116.6 6.6 73 401-484 1-113 (316)
180 PTZ00267 NIMA-related protein 99.1 7.5E-11 1.6E-15 124.3 6.0 81 397-484 69-186 (478)
181 KOG1259 Nischarin, modulator o 99.1 1.8E-11 3.9E-16 113.1 1.1 83 224-315 330-413 (490)
182 cd06625 STKc_MEKK3_like Cataly 99.1 1.6E-10 3.4E-15 111.8 7.8 79 395-484 2-121 (263)
183 cd05619 STKc_nPKC_theta Cataly 99.1 1.1E-10 2.3E-15 116.4 6.6 73 401-484 1-113 (316)
184 cd05570 STKc_PKC Catalytic dom 99.1 1E-10 2.2E-15 116.8 6.4 73 401-484 1-113 (318)
185 smart00219 TyrKc Tyrosine kina 99.1 1.4E-10 3E-15 111.7 7.1 78 398-484 2-120 (258)
186 cd06636 STKc_MAP4K4_6 Catalyti 99.1 1.7E-10 3.7E-15 112.9 7.7 89 392-484 13-138 (282)
187 cd05571 STKc_PKB Catalytic dom 99.1 1.3E-10 2.8E-15 116.3 6.9 73 401-484 1-112 (323)
188 cd06621 PKc_MAPKK_Pek1_like Ca 99.1 3.7E-10 7.9E-15 111.0 10.0 85 395-484 1-122 (287)
189 cd08223 STKc_Nek4 Catalytic do 99.1 1.5E-10 3.2E-15 111.6 7.0 81 396-484 1-119 (257)
190 cd06643 STKc_SLK Catalytic dom 99.1 1.6E-10 3.4E-15 113.2 7.3 78 397-484 7-120 (282)
191 cd06609 STKc_MST3_like Catalyt 99.1 2.4E-10 5.3E-15 111.3 8.6 77 396-484 2-115 (274)
192 cd06628 STKc_MAPKKK_Byr2_like 99.1 2.1E-10 4.5E-15 111.3 7.9 77 397-484 2-123 (267)
193 cd05612 STKc_PRKX_like Catalyt 99.1 8.4E-11 1.8E-15 115.8 5.0 79 395-484 1-118 (291)
194 cd05587 STKc_cPKC Catalytic do 99.1 9.3E-11 2E-15 117.3 5.4 78 396-484 1-118 (324)
195 cd07846 STKc_CDKL2_3 Catalytic 99.1 8E-11 1.7E-15 115.5 4.7 79 395-484 1-117 (286)
196 cd07861 STKc_CDK1_euk Catalyti 99.1 2.1E-10 4.6E-15 112.4 7.6 80 396-484 1-118 (285)
197 cd05630 STKc_GRK6 Catalytic do 99.1 1.2E-10 2.5E-15 114.4 5.8 79 397-484 2-119 (285)
198 cd06629 STKc_MAPKKK_Bck1_like 99.1 2.5E-10 5.4E-15 111.1 8.0 77 397-484 3-125 (272)
199 cd05616 STKc_cPKC_beta Catalyt 99.1 1.2E-10 2.5E-15 116.6 5.8 78 396-484 1-118 (323)
200 cd05632 STKc_GRK5 Catalytic do 99.1 1.2E-10 2.7E-15 114.2 5.9 79 397-484 2-119 (285)
201 cd08217 STKc_Nek2 Catalytic do 99.1 2.1E-10 4.7E-15 110.8 7.5 84 396-484 1-122 (265)
202 cd06645 STKc_MAP4K3 Catalytic 99.1 1.6E-10 3.4E-15 112.2 6.5 81 393-484 7-123 (267)
203 cd06651 STKc_MEKK3 Catalytic d 99.1 3.4E-10 7.4E-15 109.8 8.7 81 395-484 2-123 (266)
204 cd06610 STKc_OSR1_SPAK Catalyt 99.1 4E-10 8.6E-15 109.2 9.0 82 395-484 1-119 (267)
205 KOG0198 MEKK and related serin 99.1 1.8E-10 3.9E-15 111.5 6.5 84 395-484 17-134 (313)
206 cd05040 PTKc_Ack_like Catalyti 99.1 2.7E-10 5.7E-15 109.9 7.7 47 434-484 68-114 (257)
207 cd05585 STKc_YPK1_like Catalyt 99.1 1.4E-10 3.1E-15 115.3 5.9 71 403-484 1-110 (312)
208 cd05591 STKc_nPKC_epsilon Cata 99.1 1.8E-10 4E-15 115.1 6.7 73 401-484 1-113 (321)
209 cd06608 STKc_myosinIII_like Ca 99.1 3.5E-10 7.6E-15 110.0 8.6 91 392-484 3-130 (275)
210 cd05590 STKc_nPKC_eta Catalyti 99.1 1.5E-10 3.2E-15 115.7 6.0 73 401-484 1-113 (320)
211 KOG2345 Serine/threonine prote 99.1 1.6E-10 3.5E-15 104.2 5.5 91 392-484 18-144 (302)
212 KOG1909 Ran GTPase-activating 99.1 7.4E-12 1.6E-16 118.2 -3.3 242 51-313 24-310 (382)
213 PTZ00263 protein kinase A cata 99.1 1.3E-10 2.9E-15 116.4 5.5 80 394-484 17-135 (329)
214 cd05582 STKc_RSK_N N-terminal 99.1 1.4E-10 3E-15 115.8 5.3 73 401-484 2-115 (318)
215 cd08227 PK_STRAD_alpha Pseudok 99.1 5.6E-10 1.2E-14 111.9 9.7 76 400-484 3-118 (327)
216 cd05595 STKc_PKB_beta Catalyti 99.1 1.7E-10 3.7E-15 115.3 6.0 73 401-484 1-112 (323)
217 cd06617 PKc_MKK3_6 Catalytic d 99.1 2.3E-10 4.9E-15 112.1 6.6 82 395-484 1-120 (283)
218 cd05588 STKc_aPKC Catalytic do 99.1 2.1E-10 4.6E-15 115.0 6.5 73 401-484 1-113 (329)
219 KOG0615 Serine/threonine prote 99.1 5.2E-10 1.1E-14 108.0 8.7 80 394-484 171-293 (475)
220 cd05608 STKc_GRK1 Catalytic do 99.0 3.6E-10 7.7E-15 110.6 7.7 50 433-484 65-114 (280)
221 cd05618 STKc_aPKC_iota Catalyt 99.0 2.2E-10 4.7E-15 114.9 6.4 73 401-484 1-113 (329)
222 cd05620 STKc_nPKC_delta Cataly 99.0 2.3E-10 4.9E-15 114.1 6.3 73 401-484 1-113 (316)
223 PTZ00426 cAMP-dependent protei 99.0 1.9E-10 4E-15 115.8 5.7 82 392-484 27-148 (340)
224 cd07841 STKc_CDK7 Catalytic do 99.0 5.6E-10 1.2E-14 110.2 9.1 77 397-484 2-119 (298)
225 PF14580 LRR_9: Leucine-rich r 99.0 9.4E-11 2E-15 104.0 3.1 103 104-210 41-148 (175)
226 cd08215 STKc_Nek Catalytic dom 99.0 3.2E-10 7E-15 109.0 7.2 82 396-484 1-120 (258)
227 cd06614 STKc_PAK Catalytic dom 99.0 3.5E-10 7.6E-15 111.0 7.5 84 391-484 15-133 (286)
228 cd07862 STKc_CDK6 Catalytic do 99.0 6.5E-10 1.4E-14 109.3 9.3 84 396-484 2-127 (290)
229 cd06630 STKc_MEKK1 Catalytic d 99.0 4.7E-10 1E-14 108.8 8.1 78 396-484 1-120 (268)
230 cd05633 STKc_GRK3 Catalytic do 99.0 4.5E-10 9.7E-15 109.9 7.9 46 433-484 69-114 (279)
231 cd06644 STKc_STK10_LOK Catalyt 99.0 4.2E-10 9.1E-15 110.8 7.7 81 394-484 11-127 (292)
232 KOG0661 MAPK related serine/th 99.0 9E-11 2E-15 115.1 2.8 80 394-484 9-127 (538)
233 cd06605 PKc_MAPKK Catalytic do 99.0 4.1E-10 8.9E-15 109.0 7.5 80 395-484 1-117 (265)
234 cd05593 STKc_PKB_gamma Catalyt 99.0 3.4E-10 7.4E-15 113.4 7.1 73 401-484 1-112 (328)
235 cd06647 STKc_PAK_I Catalytic d 99.0 6.3E-10 1.4E-14 109.7 8.8 81 392-484 16-132 (293)
236 cd06613 STKc_MAP4K3_like Catal 99.0 6.4E-10 1.4E-14 107.5 8.7 81 394-484 2-118 (262)
237 KOG4279 Serine/threonine prote 99.0 6.6E-10 1.4E-14 113.5 8.8 74 401-484 581-692 (1226)
238 cd06623 PKc_MAPKK_plant_like C 99.0 5.2E-10 1.1E-14 108.2 7.8 79 395-484 1-116 (264)
239 cd05589 STKc_PKN Catalytic dom 99.0 3.1E-10 6.8E-15 113.5 6.4 76 397-484 1-118 (324)
240 KOG1259 Nischarin, modulator o 99.0 2.3E-11 5E-16 112.4 -1.6 133 52-191 279-413 (490)
241 cd07848 STKc_CDKL5 Catalytic d 99.0 5.4E-10 1.2E-14 109.7 7.9 79 395-484 1-117 (287)
242 KOG3207 Beta-tubulin folding c 99.0 2.8E-11 6.2E-16 117.4 -1.4 207 54-290 118-339 (505)
243 cd05609 STKc_MAST Catalytic do 99.0 3.5E-10 7.6E-15 112.1 6.3 79 395-484 1-118 (305)
244 cd05615 STKc_cPKC_alpha Cataly 99.0 2.7E-10 5.8E-15 114.0 5.5 78 396-484 1-118 (323)
245 PF14580 LRR_9: Leucine-rich r 99.0 2.4E-10 5.2E-15 101.4 4.5 127 53-184 15-147 (175)
246 cd08530 STKc_CNK2-like Catalyt 99.0 3.5E-10 7.5E-15 108.9 6.0 82 396-484 1-120 (256)
247 cd05594 STKc_PKB_alpha Catalyt 99.0 3.6E-10 7.9E-15 113.1 6.4 73 401-484 1-112 (325)
248 cd05583 STKc_MSK_N N-terminal 99.0 3.4E-10 7.3E-15 111.3 5.8 78 396-484 1-122 (288)
249 PF00069 Pkinase: Protein kina 99.0 2.4E-10 5.1E-15 110.3 4.6 76 398-484 2-115 (260)
250 cd07847 STKc_CDKL1_4 Catalytic 99.0 9.9E-10 2.1E-14 107.7 9.1 79 395-484 1-117 (286)
251 cd06655 STKc_PAK2 Catalytic do 99.0 4.1E-10 8.8E-15 111.2 6.2 80 393-484 17-132 (296)
252 cd05614 STKc_MSK2_N N-terminal 99.0 3.7E-10 8E-15 113.4 5.9 78 396-484 1-122 (332)
253 cd05601 STKc_CRIK Catalytic do 99.0 3.8E-10 8.2E-15 113.3 5.7 80 395-484 1-119 (330)
254 cd06606 STKc_MAPKKK Catalytic 99.0 1.3E-09 2.8E-14 104.8 9.2 78 396-484 1-118 (260)
255 KOG0574 STE20-like serine/thre 99.0 9.6E-11 2.1E-15 108.2 1.1 82 393-484 31-146 (502)
256 KOG0591 NIMA (never in mitosis 99.0 4.2E-11 9.1E-16 109.8 -1.2 90 393-484 17-141 (375)
257 cd07830 STKc_MAK_like Catalyti 99.0 5.8E-10 1.2E-14 109.2 6.7 78 397-484 1-116 (283)
258 cd07836 STKc_Pho85 Catalytic d 99.0 1.2E-09 2.7E-14 106.9 8.9 80 396-484 1-117 (284)
259 cd07831 STKc_MOK Catalytic dom 99.0 1.4E-09 3E-14 106.4 9.1 79 397-484 1-117 (282)
260 PHA03209 serine/threonine kina 99.0 6.2E-10 1.4E-14 112.9 6.9 82 392-484 63-174 (357)
261 cd06619 PKc_MKK5 Catalytic dom 99.0 1E-09 2.3E-14 107.2 8.2 74 396-484 2-112 (279)
262 cd06626 STKc_MEKK4 Catalytic d 99.0 1E-09 2.3E-14 106.1 8.0 77 397-484 2-116 (264)
263 cd05617 STKc_aPKC_zeta Catalyt 99.0 6E-10 1.3E-14 111.6 6.4 73 401-484 1-113 (327)
264 cd06607 STKc_TAO Catalytic dom 99.0 8.5E-10 1.8E-14 109.5 7.4 82 392-484 12-132 (307)
265 KOG3207 Beta-tubulin folding c 99.0 7.1E-11 1.5E-15 114.7 -0.3 206 78-314 118-339 (505)
266 cd06635 STKc_TAO1 Catalytic do 99.0 1E-09 2.2E-14 109.5 7.8 79 395-484 25-142 (317)
267 cd05575 STKc_SGK Catalytic dom 99.0 4.9E-10 1.1E-14 112.1 5.4 73 401-484 1-113 (323)
268 cd07860 STKc_CDK2_3 Catalytic 99.0 7.5E-10 1.6E-14 108.5 6.6 79 396-484 1-117 (284)
269 cd07873 STKc_PCTAIRE1 Catalyti 99.0 1.2E-09 2.6E-14 108.1 7.9 79 395-484 6-121 (301)
270 KOG0589 Serine/threonine prote 99.0 3.6E-10 7.8E-15 112.5 3.9 85 394-484 3-123 (426)
271 cd05611 STKc_Rim15_like Cataly 99.0 7.7E-10 1.7E-14 106.9 6.0 73 401-484 2-114 (260)
272 KOG0578 p21-activated serine/t 99.0 1E-09 2.2E-14 110.3 6.6 87 391-484 269-386 (550)
273 cd07871 STKc_PCTAIRE3 Catalyti 98.9 2.1E-09 4.5E-14 105.6 8.7 80 394-484 4-120 (288)
274 PHA03390 pk1 serine/threonine- 98.9 1.6E-09 3.4E-14 105.3 7.7 79 395-484 14-126 (267)
275 cd05584 STKc_p70S6K Catalytic 98.9 1E-09 2.2E-14 109.8 6.2 73 401-484 2-117 (323)
276 cd05122 PKc_STE Catalytic doma 98.9 1.9E-09 4.2E-14 103.1 7.9 79 396-484 1-115 (253)
277 cd05586 STKc_Sck1_like Catalyt 98.9 1.3E-09 2.8E-14 109.4 6.9 46 433-484 68-113 (330)
278 cd07843 STKc_CDC2L1 Catalytic 98.9 2E-09 4.4E-14 105.9 8.1 82 394-484 4-123 (293)
279 cd05579 STKc_MAST_like Catalyt 98.9 8.8E-10 1.9E-14 106.5 5.4 46 433-484 65-110 (265)
280 cd05573 STKc_ROCK_NDR_like Cat 98.9 6.3E-10 1.4E-14 112.6 4.5 79 395-484 1-118 (350)
281 cd06627 STKc_Cdc7_like Catalyt 98.9 1.5E-09 3.3E-14 104.2 6.8 78 396-484 1-116 (254)
282 cd06658 STKc_PAK5 Catalytic do 98.9 1E-09 2.2E-14 108.1 5.6 81 392-484 19-135 (292)
283 cd05604 STKc_SGK3 Catalytic do 98.9 9.5E-10 2.1E-14 110.1 5.4 73 401-484 1-113 (325)
284 cd07859 STKc_TDY_MAPK_plant Ca 98.9 1.3E-09 2.7E-14 109.8 6.1 81 397-484 2-120 (338)
285 cd06652 STKc_MEKK2 Catalytic d 98.9 2.5E-09 5.4E-14 103.7 7.9 81 395-484 2-123 (265)
286 cd05578 STKc_Yank1 Catalytic d 98.9 8.3E-10 1.8E-14 106.5 4.6 78 396-484 1-117 (258)
287 cd05602 STKc_SGK1 Catalytic do 98.9 9.9E-10 2.1E-14 110.0 5.3 73 401-484 1-113 (325)
288 PTZ00266 NIMA-related protein 98.9 1.2E-09 2.6E-14 120.4 6.2 87 393-484 11-135 (1021)
289 PRK13184 pknD serine/threonine 98.9 2.4E-09 5.1E-14 117.4 8.5 85 395-484 2-130 (932)
290 cd07833 STKc_CDKL Catalytic do 98.9 3.7E-09 8E-14 103.7 9.2 78 396-484 2-117 (288)
291 cd07872 STKc_PCTAIRE2 Catalyti 98.9 2.3E-09 5E-14 106.5 7.8 80 394-484 5-121 (309)
292 KOG4658 Apoptotic ATPase [Sign 98.9 1.2E-09 2.6E-14 120.6 6.1 86 53-140 567-652 (889)
293 cd05603 STKc_SGK2 Catalytic do 98.9 1.1E-09 2.5E-14 109.3 5.5 73 401-484 1-113 (321)
294 cd07832 STKc_CCRK Catalytic do 98.9 2.9E-09 6.3E-14 104.3 8.2 77 397-484 2-116 (286)
295 cd06648 STKc_PAK_II Catalytic 98.9 2E-09 4.4E-14 105.5 7.0 77 396-484 20-132 (285)
296 cd07838 STKc_CDK4_6_like Catal 98.9 5.4E-09 1.2E-13 102.5 9.9 83 397-484 1-124 (287)
297 KOG0582 Ste20-like serine/thre 98.9 3.7E-09 8.1E-14 103.2 8.2 85 393-484 24-143 (516)
298 cd07863 STKc_CDK4 Catalytic do 98.9 3.6E-09 7.9E-14 103.8 8.5 83 397-484 2-125 (288)
299 cd07864 STKc_CDK12 Catalytic d 98.9 2.9E-09 6.4E-14 105.3 7.8 87 392-484 4-133 (302)
300 cd07835 STKc_CDK1_like Catalyt 98.9 2.3E-09 5E-14 104.9 7.0 78 397-484 1-116 (283)
301 cd05606 STKc_beta_ARK Catalyti 98.9 2.7E-09 5.9E-14 104.2 7.5 46 433-484 69-114 (278)
302 cd05572 STKc_cGK_PKG Catalytic 98.9 3.9E-09 8.5E-14 102.0 8.5 71 403-484 1-110 (262)
303 cd05574 STKc_phototropin_like 98.9 3E-09 6.4E-14 106.0 7.7 81 395-484 1-120 (316)
304 cd07837 STKc_CdkB_plant Cataly 98.9 3.3E-09 7.1E-14 104.5 7.9 88 395-484 1-127 (295)
305 KOG0531 Protein phosphatase 1, 98.9 2.2E-10 4.8E-15 118.2 -0.6 129 55-190 70-199 (414)
306 cd05580 STKc_PKA Catalytic dom 98.9 2.3E-09 5.1E-14 105.4 6.5 79 395-484 1-118 (290)
307 KOG0694 Serine/threonine prote 98.9 2.3E-09 5E-14 110.0 6.5 81 392-484 365-485 (694)
308 cd05577 STKc_GRK Catalytic dom 98.9 4.4E-09 9.6E-14 102.7 8.1 48 433-484 65-112 (277)
309 PHA03211 serine/threonine kina 98.9 5.2E-09 1.1E-13 109.0 9.0 81 393-484 167-277 (461)
310 cd07840 STKc_CDK9_like Catalyt 98.9 5.2E-09 1.1E-13 102.5 8.5 79 397-484 1-117 (287)
311 PF08263 LRRNT_2: Leucine rich 98.9 2.2E-09 4.9E-14 71.6 4.0 38 2-39 3-43 (43)
312 cd05596 STKc_ROCK Catalytic do 98.9 1.9E-09 4.2E-14 109.8 5.6 81 392-484 40-159 (370)
313 cd06618 PKc_MKK7 Catalytic dom 98.9 2.4E-09 5.2E-14 105.7 5.9 82 392-484 12-131 (296)
314 cd06659 STKc_PAK6 Catalytic do 98.9 2.9E-09 6.4E-14 105.1 6.4 79 394-484 20-134 (297)
315 cd07853 STKc_NLK Catalytic dom 98.9 2.1E-09 4.6E-14 109.7 5.5 82 396-484 1-120 (372)
316 cd06634 STKc_TAO2 Catalytic do 98.9 4.3E-09 9.3E-14 104.5 7.5 82 392-484 12-132 (308)
317 KOG0587 Traf2- and Nck-interac 98.9 7.5E-09 1.6E-13 108.9 9.3 89 392-484 16-140 (953)
318 KOG0592 3-phosphoinositide-dep 98.9 2.9E-09 6.3E-14 106.4 5.9 82 392-484 70-191 (604)
319 cd07869 STKc_PFTAIRE1 Catalyti 98.9 1.5E-08 3.2E-13 100.4 11.0 81 393-484 3-120 (303)
320 PTZ00036 glycogen synthase kin 98.9 4.4E-09 9.5E-14 109.6 7.4 90 392-484 63-187 (440)
321 cd07870 STKc_PFTAIRE2 Catalyti 98.8 1.1E-08 2.5E-13 100.5 9.9 82 392-484 2-120 (291)
322 KOG0598 Ribosomal protein S6 k 98.8 2.2E-09 4.8E-14 102.7 4.4 82 392-484 22-142 (357)
323 cd07844 STKc_PCTAIRE_like Cata 98.8 6.5E-09 1.4E-13 102.2 7.9 80 394-484 4-120 (291)
324 cd07858 STKc_TEY_MAPK_plant Ca 98.8 3.5E-09 7.6E-14 106.6 6.0 86 392-484 2-125 (337)
325 KOG0600 Cdc2-related protein k 98.8 4.9E-09 1.1E-13 103.9 6.7 84 392-484 114-235 (560)
326 cd06633 STKc_TAO3 Catalytic do 98.8 6.8E-09 1.5E-13 103.3 7.8 77 397-484 23-138 (313)
327 cd06657 STKc_PAK4 Catalytic do 98.8 7E-09 1.5E-13 102.1 7.8 73 400-484 25-133 (292)
328 cd05581 STKc_PDK1 Catalytic do 98.8 2.2E-09 4.7E-14 104.8 4.0 84 395-484 1-119 (280)
329 cd07839 STKc_CDK5 Catalytic do 98.8 2.2E-09 4.8E-14 105.1 3.9 77 397-484 2-116 (284)
330 cd05118 STKc_CMGC Catalytic do 98.8 8.7E-09 1.9E-13 100.7 8.1 77 397-484 1-115 (283)
331 KOG0616 cAMP-dependent protein 98.8 7E-09 1.5E-13 96.2 6.7 81 393-484 42-161 (355)
332 cd08226 PK_STRAD_beta Pseudoki 98.8 2.1E-08 4.6E-13 100.5 10.9 48 433-484 71-118 (328)
333 KOG0659 Cdk activating kinase 98.8 8.3E-09 1.8E-13 94.3 6.9 78 396-484 3-118 (318)
334 KOG0579 Ste20-like serine/thre 98.8 3.2E-09 7E-14 107.4 4.7 88 392-484 29-147 (1187)
335 KOG0584 Serine/threonine prote 98.8 6.2E-09 1.3E-13 105.9 6.6 81 398-484 43-160 (632)
336 PF13855 LRR_8: Leucine rich r 98.8 4.4E-09 9.6E-14 76.6 4.1 57 109-165 4-60 (61)
337 KOG1909 Ran GTPase-activating 98.8 5.1E-10 1.1E-14 106.0 -1.2 193 78-290 89-311 (382)
338 cd07852 STKc_MAPK15 Catalytic 98.8 7.6E-09 1.7E-13 104.1 7.1 81 393-484 5-124 (337)
339 PLN00009 cyclin-dependent kina 98.8 1.1E-08 2.3E-13 100.8 7.8 80 395-484 2-119 (294)
340 KOG0577 Serine/threonine prote 98.8 2.1E-09 4.6E-14 108.0 2.7 81 393-484 24-143 (948)
341 PF13855 LRR_8: Leucine rich r 98.8 4.7E-09 1E-13 76.5 3.8 59 82-141 2-60 (61)
342 PHA03212 serine/threonine kina 98.8 1.6E-08 3.5E-13 103.7 9.1 80 393-484 90-199 (391)
343 KOG0531 Protein phosphatase 1, 98.8 1E-09 2.2E-14 113.3 -0.5 198 78-315 69-269 (414)
344 cd05613 STKc_MSK1_N N-terminal 98.8 1E-08 2.2E-13 100.8 6.4 78 396-484 1-122 (290)
345 cd07829 STKc_CDK_like Catalyti 98.8 1.3E-08 2.8E-13 99.5 6.9 77 397-484 1-115 (282)
346 cd07865 STKc_CDK9 Catalytic do 98.8 1.7E-08 3.7E-13 100.1 7.8 86 393-484 10-136 (310)
347 cd07849 STKc_ERK1_2_like Catal 98.8 1E-08 2.2E-13 103.2 6.1 84 393-484 3-123 (336)
348 cd05123 STKc_AGC Catalytic dom 98.7 1E-08 2.2E-13 98.3 5.6 46 433-484 65-110 (250)
349 KOG0610 Putative serine/threon 98.7 9.8E-09 2.1E-13 99.5 5.1 83 393-484 75-196 (459)
350 KOG0611 Predicted serine/threo 98.7 3.6E-09 7.8E-14 101.8 2.1 81 396-484 54-170 (668)
351 cd06616 PKc_MKK4 Catalytic dom 98.7 1.3E-08 2.7E-13 100.0 5.9 80 395-484 4-124 (288)
352 PTZ00284 protein kinase; Provi 98.7 3E-08 6.5E-13 104.5 9.1 82 392-484 126-248 (467)
353 KOG4658 Apoptotic ATPase [Sign 98.7 8.4E-09 1.8E-13 114.0 4.7 125 57-186 523-651 (889)
354 cd07845 STKc_CDK10 Catalytic d 98.7 4E-08 8.6E-13 97.6 9.1 83 393-484 5-125 (309)
355 PHA03207 serine/threonine kina 98.7 2.6E-08 5.6E-13 102.4 7.9 80 393-484 90-202 (392)
356 PHA02882 putative serine/threo 98.7 1.7E-08 3.7E-13 99.5 6.1 31 507-537 263-293 (294)
357 cd07851 STKc_p38 Catalytic dom 98.7 1.2E-08 2.5E-13 103.1 4.7 86 391-484 11-135 (343)
358 KOG0605 NDR and related serine 98.7 3E-08 6.4E-13 99.3 7.2 82 392-484 138-258 (550)
359 cd08216 PK_STRAD Pseudokinase 98.7 6.2E-08 1.3E-12 96.4 9.7 48 433-484 71-118 (314)
360 cd05628 STKc_NDR1 Catalytic do 98.7 2.6E-08 5.7E-13 101.3 7.1 79 395-484 1-118 (363)
361 cd07876 STKc_JNK2 Catalytic do 98.7 4.1E-08 8.8E-13 99.8 8.4 83 393-484 19-140 (359)
362 cd05622 STKc_ROCK1 Catalytic d 98.7 1.9E-08 4.1E-13 102.6 5.9 81 392-484 40-159 (371)
363 cd07880 STKc_p38gamma_MAPK12 C 98.7 1.9E-08 4.1E-13 101.5 5.8 86 391-484 11-135 (343)
364 cd07855 STKc_ERK5 Catalytic do 98.7 2.2E-08 4.7E-13 100.7 6.1 84 393-484 3-124 (334)
365 cd07867 STKc_CDC2L6 Catalytic 98.7 5.8E-08 1.3E-12 96.7 9.1 81 400-484 6-125 (317)
366 KOG0588 Serine/threonine prote 98.7 2E-08 4.4E-13 102.7 5.3 79 395-484 12-129 (786)
367 cd05623 STKc_MRCK_alpha Cataly 98.7 3.3E-08 7E-13 99.3 6.7 80 395-484 1-119 (332)
368 cd05624 STKc_MRCK_beta Catalyt 98.7 3.2E-08 6.9E-13 99.3 6.7 80 395-484 1-119 (331)
369 cd07874 STKc_JNK3 Catalytic do 98.7 4.7E-08 1E-12 99.2 7.7 83 393-484 15-136 (355)
370 cd06653 STKc_MEKK3_like_1 Cata 98.7 5.7E-08 1.2E-12 94.0 7.9 81 395-484 2-123 (264)
371 cd05626 STKc_LATS2 Catalytic d 98.7 4.1E-08 8.8E-13 100.6 7.1 78 396-484 2-118 (381)
372 cd05599 STKc_NDR_like Catalyti 98.6 3.4E-08 7.3E-13 100.6 6.3 79 395-484 1-118 (364)
373 KOG0583 Serine/threonine prote 98.6 5.9E-08 1.3E-12 97.8 7.8 82 392-484 14-137 (370)
374 PTZ00024 cyclin-dependent prot 98.6 7.2E-08 1.6E-12 96.9 8.5 45 433-484 92-136 (335)
375 cd07878 STKc_p38beta_MAPK11 Ca 98.6 3.5E-08 7.6E-13 99.6 6.0 86 391-484 11-135 (343)
376 cd07856 STKc_Sty1_Hog1 Catalyt 98.6 1.1E-07 2.4E-12 95.2 9.6 82 391-484 6-125 (328)
377 cd05576 STKc_RPK118_like Catal 98.6 4.8E-08 1E-12 93.0 6.2 46 433-484 57-102 (237)
378 PLN03225 Serine/threonine-prot 98.6 4.4E-08 9.6E-13 104.7 6.6 93 392-484 129-272 (566)
379 cd05629 STKc_NDR_like_fungal C 98.6 6.2E-08 1.3E-12 99.1 7.3 79 395-484 1-118 (377)
380 cd07834 STKc_MAPK Catalytic do 98.6 4E-08 8.6E-13 98.6 5.8 81 397-484 2-120 (330)
381 cd07875 STKc_JNK1 Catalytic do 98.6 8.9E-08 1.9E-12 97.5 8.2 84 392-484 21-143 (364)
382 cd05627 STKc_NDR2 Catalytic do 98.6 6.5E-08 1.4E-12 98.3 7.1 79 395-484 1-118 (360)
383 cd05597 STKc_DMPK_like Catalyt 98.6 6.2E-08 1.3E-12 97.2 6.8 80 395-484 1-119 (331)
384 KOG0593 Predicted protein kina 98.6 4.1E-08 8.9E-13 91.4 4.8 84 395-484 2-118 (396)
385 cd07868 STKc_CDK8 Catalytic do 98.6 4.7E-07 1E-11 90.2 12.7 81 400-484 6-125 (317)
386 cd05598 STKc_LATS Catalytic do 98.6 8.7E-08 1.9E-12 98.0 7.3 79 395-484 1-118 (376)
387 cd05625 STKc_LATS1 Catalytic d 98.6 8.6E-08 1.9E-12 98.3 7.2 78 396-484 2-118 (382)
388 cd07854 STKc_MAPK4_6 Catalytic 98.6 1.3E-07 2.9E-12 95.3 8.0 83 394-484 4-131 (342)
389 cd05621 STKc_ROCK2 Catalytic d 98.6 8.5E-08 1.9E-12 97.7 6.5 81 392-484 40-159 (370)
390 KOG0032 Ca2+/calmodulin-depend 98.6 1.5E-07 3.3E-12 94.9 8.1 80 393-484 33-152 (382)
391 KOG0604 MAP kinase-activated p 98.6 1.4E-07 2.9E-12 87.9 7.0 90 391-484 57-178 (400)
392 KOG0585 Ca2+/calmodulin-depend 98.6 1.7E-07 3.8E-12 92.4 7.9 87 392-484 94-227 (576)
393 cd07866 STKc_BUR1 Catalytic do 98.6 1.2E-07 2.5E-12 94.2 6.9 86 393-484 6-132 (311)
394 KOG0658 Glycogen synthase kina 98.5 2.4E-08 5.2E-13 95.6 1.3 88 393-484 22-142 (364)
395 KOG0597 Serine-threonine prote 98.5 3.5E-08 7.6E-13 99.1 2.5 83 395-484 2-117 (808)
396 cd07842 STKc_CDK8_like Catalyt 98.5 2.1E-07 4.6E-12 92.6 8.2 83 397-484 2-125 (316)
397 smart00220 S_TKc Serine/Threon 98.5 1.6E-07 3.6E-12 89.0 6.8 46 433-484 59-104 (244)
398 cd00180 PKc Catalytic domain o 98.5 6.3E-07 1.4E-11 82.7 10.4 72 403-484 1-109 (215)
399 KOG0663 Protein kinase PITSLRE 98.5 1.3E-07 2.7E-12 89.4 5.1 87 392-484 73-194 (419)
400 KOG0599 Phosphorylase kinase g 98.5 3.1E-08 6.8E-13 90.8 0.8 46 433-484 95-140 (411)
401 cd07850 STKc_JNK Catalytic dom 98.5 4.3E-07 9.3E-12 92.0 8.9 84 392-484 13-135 (353)
402 cd07879 STKc_p38delta_MAPK13 C 98.5 1.8E-07 3.9E-12 94.4 5.9 85 391-484 11-134 (342)
403 cd07857 STKc_MPK1 Catalytic do 98.5 2.9E-07 6.2E-12 92.5 7.2 80 397-484 2-122 (332)
404 KOG0612 Rho-associated, coiled 98.4 6.4E-08 1.4E-12 104.7 1.2 82 392-484 72-192 (1317)
405 KOG0986 G protein-coupled rece 98.4 3.8E-07 8.2E-12 89.6 6.2 89 392-484 182-304 (591)
406 KOG0667 Dual-specificity tyros 98.4 4.5E-07 9.7E-12 93.3 6.7 79 396-484 187-306 (586)
407 KOG4645 MAPKKK (MAP kinase kin 98.4 2E-07 4.4E-12 102.3 4.4 82 392-484 1232-1351(1509)
408 cd07877 STKc_p38alpha_MAPK14 C 98.4 3.6E-07 7.9E-12 92.2 5.9 86 391-484 13-137 (345)
409 KOG0596 Dual specificity; seri 98.4 3E-07 6.6E-12 92.4 5.0 81 393-484 359-477 (677)
410 cd05610 STKc_MASTL Catalytic d 98.4 4.7E-07 1E-11 99.3 7.0 79 395-484 4-121 (669)
411 PLN03224 probable serine/threo 98.3 5.3E-07 1.2E-11 94.2 5.8 51 434-484 258-326 (507)
412 KOG1035 eIF-2alpha kinase GCN2 98.3 2.1E-07 4.6E-12 101.5 2.8 44 435-484 670-714 (1351)
413 PHA03210 serine/threonine kina 98.3 7.6E-07 1.6E-11 94.4 6.9 84 394-484 147-284 (501)
414 KOG1859 Leucine-rich repeat pr 98.3 1.4E-08 3E-13 104.7 -6.3 126 57-190 164-292 (1096)
415 KOG0576 Mitogen-activated prot 98.3 4.1E-07 8.8E-12 93.4 3.3 87 392-484 12-129 (829)
416 KOG2120 SCF ubiquitin ligase, 98.3 2.1E-08 4.5E-13 93.1 -5.5 56 83-139 187-243 (419)
417 KOG4250 TANK binding protein k 98.3 1E-06 2.3E-11 91.2 6.1 87 395-484 13-137 (732)
418 KOG2982 Uncharacterized conser 98.3 1.8E-07 3.8E-12 87.1 -0.1 79 109-187 74-156 (418)
419 KOG4579 Leucine-rich repeat (L 98.3 4.5E-08 9.7E-13 80.6 -3.6 105 58-167 28-136 (177)
420 KOG1859 Leucine-rich repeat pr 98.2 3.5E-08 7.5E-13 101.9 -6.2 121 109-236 167-292 (1096)
421 KOG4717 Serine/threonine prote 98.2 2E-06 4.3E-11 85.8 6.0 83 392-484 15-135 (864)
422 KOG1023 Natriuretic peptide re 98.2 2.7E-06 5.9E-11 87.0 6.9 53 422-484 13-65 (484)
423 KOG4579 Leucine-rich repeat (L 98.2 5.7E-08 1.2E-12 80.0 -4.5 108 83-195 29-140 (177)
424 KOG0586 Serine/threonine prote 98.2 3.8E-06 8.3E-11 85.8 7.3 82 392-484 53-172 (596)
425 KOG2982 Uncharacterized conser 98.2 2E-07 4.3E-12 86.8 -1.7 205 109-317 48-265 (418)
426 KOG2120 SCF ubiquitin ligase, 98.2 6.3E-08 1.4E-12 90.0 -5.2 176 109-311 188-373 (419)
427 KOG0033 Ca2+/calmodulin-depend 98.1 1.1E-07 2.3E-12 86.0 -4.0 86 393-484 9-127 (355)
428 smart00750 KIND kinase non-cat 98.1 3.4E-06 7.3E-11 76.1 5.5 33 511-543 140-172 (176)
429 KOG0671 LAMMER dual specificit 98.1 9.5E-06 2E-10 78.4 8.5 86 394-484 88-209 (415)
430 COG5238 RNA1 Ran GTPase-activa 98.1 6.2E-07 1.3E-11 82.4 0.3 224 54-315 27-286 (388)
431 KOG0690 Serine/threonine prote 98.0 7.4E-06 1.6E-10 77.3 5.6 87 392-484 165-285 (516)
432 PF12799 LRR_4: Leucine Rich r 98.0 3.9E-06 8.5E-11 56.0 2.7 37 57-94 1-37 (44)
433 KOG0696 Serine/threonine prote 98.0 2.5E-06 5.5E-11 82.8 2.4 80 394-484 348-467 (683)
434 KOG0594 Protein kinase PCTAIRE 98.0 1.3E-05 2.7E-10 77.1 6.5 87 395-484 11-137 (323)
435 PRK15386 type III secretion pr 97.9 1.8E-05 4E-10 79.0 7.2 57 53-116 48-104 (426)
436 KOG0603 Ribosomal protein S6 k 97.9 2.1E-05 4.4E-10 81.0 6.2 81 392-484 319-432 (612)
437 PF12799 LRR_4: Leucine Rich r 97.9 1.3E-05 2.8E-10 53.5 2.9 36 82-119 2-37 (44)
438 KOG1151 Tousled-like protein k 97.8 8.1E-06 1.8E-10 80.0 2.5 46 433-484 540-585 (775)
439 PRK09605 bifunctional UGMP fam 97.8 0.00016 3.5E-09 77.4 12.3 70 396-484 334-445 (535)
440 KOG1345 Serine/threonine kinas 97.8 2.1E-05 4.5E-10 72.6 4.6 86 392-484 21-138 (378)
441 KOG0660 Mitogen-activated prot 97.8 2.3E-05 5E-10 75.3 4.6 86 392-484 19-142 (359)
442 PRK14879 serine/threonine prot 97.8 4.9E-05 1.1E-09 70.8 6.7 69 401-484 2-112 (211)
443 KOG1027 Serine/threonine prote 97.8 5E-05 1.1E-09 80.4 7.3 83 396-484 510-623 (903)
444 KOG0607 MAP kinase-interacting 97.8 1.7E-05 3.7E-10 74.8 3.0 74 400-484 83-193 (463)
445 COG5238 RNA1 Ran GTPase-activa 97.8 4.6E-06 9.9E-11 76.9 -0.8 156 148-314 86-255 (388)
446 PRK15386 type III secretion pr 97.7 8.9E-05 1.9E-09 74.2 7.5 138 77-260 48-188 (426)
447 cd05147 RIO1_euk RIO kinase fa 97.7 0.00011 2.5E-09 67.0 7.0 42 437-484 93-135 (190)
448 PRK09188 serine/threonine prot 97.7 8.2E-05 1.8E-09 74.6 6.4 79 393-484 16-128 (365)
449 TIGR03724 arch_bud32 Kae1-asso 97.6 7.8E-05 1.7E-09 68.7 5.8 38 434-484 70-107 (199)
450 smart00221 STYKc Protein kinas 97.6 0.00011 2.3E-09 68.7 6.8 78 397-484 1-115 (225)
451 KOG0695 Serine/threonine prote 97.6 2.8E-05 6.2E-10 73.6 2.6 85 392-484 247-368 (593)
452 KOG1644 U2-associated snRNP A' 97.6 0.0001 2.3E-09 65.3 5.2 17 78-94 61-77 (233)
453 KOG0669 Cyclin T-dependent kin 97.6 3E-05 6.6E-10 70.8 1.5 83 396-484 18-141 (376)
454 KOG1644 U2-associated snRNP A' 97.5 0.00014 3.1E-09 64.4 5.3 123 60-188 22-151 (233)
455 KOG0666 Cyclin C-dependent kin 97.5 2.7E-05 5.8E-10 73.3 0.7 90 394-485 23-150 (438)
456 cd05145 RIO1_like RIO kinase f 97.5 0.0004 8.7E-09 63.5 7.6 41 437-484 93-134 (190)
457 KOG0664 Nemo-like MAPK-related 97.4 1.2E-05 2.6E-10 74.1 -3.2 128 392-535 50-220 (449)
458 KOG3665 ZYG-1-like serine/thre 97.3 0.00017 3.6E-09 78.4 3.8 130 179-315 124-264 (699)
459 KOG4236 Serine/threonine prote 97.3 0.0003 6.5E-09 70.9 5.0 81 399-484 568-681 (888)
460 PF13306 LRR_5: Leucine rich r 97.3 0.0013 2.8E-08 55.7 8.1 106 52-163 7-112 (129)
461 KOG0662 Cyclin-dependent kinas 97.2 0.00011 2.4E-09 63.6 1.3 78 396-484 3-118 (292)
462 KOG0608 Warts/lats-like serine 97.2 0.0004 8.6E-09 71.6 5.3 80 394-484 628-746 (1034)
463 KOG1166 Mitotic checkpoint ser 97.2 0.00024 5.2E-09 78.5 4.0 85 394-484 697-811 (974)
464 KOG2739 Leucine-rich acidic nu 97.2 0.00015 3.2E-09 67.1 1.2 65 52-119 38-104 (260)
465 smart00090 RIO RIO-like kinase 97.1 0.001 2.2E-08 63.0 6.5 43 436-484 123-165 (237)
466 KOG3665 ZYG-1-like serine/thre 97.0 0.00023 4.9E-09 77.4 1.4 152 130-307 122-281 (699)
467 PF13306 LRR_5: Leucine rich r 97.0 0.0023 5E-08 54.2 7.3 123 75-204 6-128 (129)
468 PLN00181 protein SPA1-RELATED; 97.0 0.0004 8.7E-09 78.2 3.0 45 434-484 53-97 (793)
469 KOG1152 Signal transduction se 97.0 0.0012 2.7E-08 67.4 5.7 80 394-484 560-687 (772)
470 KOG0983 Mitogen-activated prot 96.8 0.00022 4.7E-09 66.2 -0.8 78 396-484 93-208 (391)
471 KOG2739 Leucine-rich acidic nu 96.8 0.00066 1.4E-08 62.9 2.0 91 73-168 35-130 (260)
472 PRK10345 hypothetical protein; 96.7 0.0036 7.7E-08 57.9 6.5 39 437-484 81-122 (210)
473 KOG1290 Serine/threonine prote 96.7 0.002 4.3E-08 64.7 4.8 87 393-484 76-204 (590)
474 cd05144 RIO2_C RIO kinase fami 96.6 0.0051 1.1E-07 56.5 6.3 38 435-484 105-142 (198)
475 KOG2123 Uncharacterized conser 96.5 0.00019 4.1E-09 66.7 -3.5 95 109-207 22-122 (388)
476 KOG1006 Mitogen-activated prot 96.5 0.00038 8.3E-09 64.3 -1.8 81 394-484 63-184 (361)
477 KOG2123 Uncharacterized conser 96.2 0.00021 4.5E-09 66.5 -5.1 100 56-160 18-123 (388)
478 KOG1167 Serine/threonine prote 96.0 0.0038 8.2E-08 61.6 2.0 84 392-484 33-149 (418)
479 KOG0614 cGMP-dependent protein 95.9 0.0028 6E-08 63.9 1.1 87 392-484 417-537 (732)
480 KOG1164 Casein kinase (serine/ 95.9 0.016 3.4E-07 57.8 6.6 84 396-484 19-139 (322)
481 KOG1165 Casein kinase (serine/ 95.9 0.0078 1.7E-07 57.7 3.9 83 396-484 29-141 (449)
482 KOG0668 Casein kinase II, alph 95.9 0.0019 4.2E-08 58.5 -0.3 85 391-484 34-149 (338)
483 KOG1266 Protein kinase [Signal 95.8 0.0056 1.2E-07 58.6 2.5 50 433-484 144-193 (458)
484 cd05119 RIO RIO kinase family, 95.8 0.018 3.9E-07 52.2 5.9 42 435-484 89-131 (187)
485 KOG0984 Mitogen-activated prot 95.8 0.0038 8.3E-08 55.8 1.1 85 392-484 43-165 (282)
486 KOG1163 Casein kinase (serine/ 95.8 0.0085 1.8E-07 54.9 3.3 86 393-484 13-128 (341)
487 cd05120 APH_ChoK_like Aminogly 95.6 0.041 9E-07 47.3 7.1 67 400-484 3-103 (155)
488 PF00560 LRR_1: Leucine Rich R 95.5 0.0055 1.2E-07 34.0 0.7 12 83-94 2-13 (22)
489 KOG0473 Leucine-rich repeat pr 95.4 0.00059 1.3E-08 61.9 -5.3 86 52-141 37-122 (326)
490 PF00560 LRR_1: Leucine Rich R 95.3 0.0072 1.6E-07 33.5 0.8 22 58-80 1-22 (22)
491 KOG4158 BRPK/PTEN-induced prot 95.3 0.023 4.9E-07 56.0 4.6 44 433-484 315-358 (598)
492 PRK12274 serine/threonine prot 95.3 0.033 7.2E-07 51.1 5.4 75 397-484 4-108 (218)
493 cd05154 ACAD10_11_like Acyl-Co 95.0 0.065 1.4E-06 49.9 7.0 43 435-484 74-116 (223)
494 PRK10359 lipopolysaccharide co 94.9 0.039 8.4E-07 51.6 4.8 78 393-484 29-152 (232)
495 KOG4308 LRR-containing protein 94.7 0.00016 3.4E-09 75.2 -12.7 64 251-314 235-303 (478)
496 KOG4308 LRR-containing protein 94.4 0.00032 7E-09 72.9 -11.2 66 225-291 235-304 (478)
497 PRK01723 3-deoxy-D-manno-octul 94.4 0.023 5E-07 53.9 2.2 37 437-484 122-159 (239)
498 KOG0473 Leucine-rich repeat pr 94.2 0.0014 3E-08 59.6 -6.1 88 76-167 37-124 (326)
499 TIGR01982 UbiB 2-polyprenylphe 94.1 0.12 2.7E-06 53.7 6.9 25 396-421 119-143 (437)
500 PF13504 LRR_7: Leucine rich r 93.0 0.056 1.2E-06 27.7 1.1 12 83-94 3-14 (17)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.3e-58 Score=522.53 Aligned_cols=200 Identities=25% Similarity=0.386 Sum_probs=128.5
Q ss_pred ccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCC-CcccCCcc-ccc
Q 039925 270 ASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNH-SFSCPGFE-FSV 337 (549)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~-~~~ip~~~-~~~ 337 (549)
|..+..+++|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|.. ++++|+ .+.+|... +..
T Consensus 516 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~ 595 (968)
T PLN00113 516 PDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLA 595 (968)
T ss_pred ChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcc
Confidence 455566666666666666666666666666667777777777776666654 666666 34566543 222
Q ss_pred ccceeeecCCCCCCCCccccCcccCCCCCCCccc-eeehhHHHHHHHHHh-----hc-C---------------cc----
Q 039925 338 IKLEFQIPGNKKLCGGLDELHLLSCHSKESKRQT-IKLLTMAISMILSLF-----IL-S---------------PS---- 391 (549)
Q Consensus 338 l~l~~~~~gn~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~-~---------------~~---- 391 (549)
+.- ..+.||+.+|+..+....++|....+.... +.+++++++++++++ ++ . .|
T Consensus 596 ~~~-~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (968)
T PLN00113 596 INA-SAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQF 674 (968)
T ss_pred cCh-hhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence 221 467899999987544445567543222221 222211111111111 11 0 01
Q ss_pred ------------cccccCcCCCccccCceecEEEEEeC-CCce-------------------------------eEEEec
Q 039925 392 ------------TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------AGYSEG 427 (549)
Q Consensus 392 ------------~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------~g~~~~ 427 (549)
.....|...++||+|+||.||+|+.. ++.. +|+|..
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~ 754 (968)
T PLN00113 675 FDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRS 754 (968)
T ss_pred cccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEc
Confidence 01234566788999999999999974 3322 677776
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++|||||++|+|.++++ .++|.++.+|+.|+|+||+|||
T Consensus 755 -----~~~~~lv~Ey~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~L~yLH 797 (968)
T PLN00113 755 -----EKGAYLIHEYIEGKNLSEVLR---------NLSWERRRKIAIGIAKALRFLH 797 (968)
T ss_pred -----CCCCEEEEeCCCCCcHHHHHh---------cCCHHHHHHHHHHHHHHHHHhc
Confidence 678899999999999999996 2789999999999999999999
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=4.4e-30 Score=293.65 Aligned_cols=306 Identities=31% Similarity=0.494 Sum_probs=224.5
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCcceeCCCCCceE----------eecCccccCCCCCCEEEccCCccee
Q 039925 2 TDHLALLAIKSLLHDRRGVTSSWSNSIDLCQWRGVTCTHQHQRIN----------KCLTPHVGNFGYLRFINLVDNNFRG 71 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~----------g~lp~~~~~l~~L~~L~L~~n~l~~ 71 (549)
.|++||++||+++.+|.+.+.+|+...+||.|.||.|+.. .+|+ |.+|..|..+++|++|+|++|++++
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~-~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~ 107 (968)
T PLN00113 29 EELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNS-SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSG 107 (968)
T ss_pred HHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCC-CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCC
Confidence 5889999999999888778899988889999999999743 2333 6788889999999999999999998
Q ss_pred cCCcccc-CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccc
Q 039925 72 EIPEKVG-RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTL 150 (549)
Q Consensus 72 ~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 150 (549)
.+|..+. .+++|++|+|++|++++.+|. ..+++| ++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..+
T Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L-~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 108 PIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL-ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred cCChHHhccCCCCCEEECcCCccccccCc--cccCCC-CEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 8887655 889999999999988877775 456777 888888888877788888888888888888888877788888
Q ss_pred cCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc-ccc--cccccCccccc
Q 039925 151 SNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL-AQK--LYWSDVSTTAT 226 (549)
Q Consensus 151 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~-~~~--l~~l~~~~~L~ 226 (549)
.++++|++|+|++|.+.+.+|..+..++ |++|++++|.+++.+|..+. .+++|++|+++++ +.. ...+...++|+
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 263 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQ 263 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCC
Confidence 8888888888888888777788888777 88888888888777777776 7788888887762 111 11223334666
Q ss_pred EEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEE
Q 039925 227 IIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMEL 306 (549)
Q Consensus 227 ~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 306 (549)
.|++++|.+.+.+|..+..+ ++|+.|++++|.+.+.+ |..+..+++|+.|++++|.+.+.+|..+..+++|+.|
T Consensus 264 ~L~L~~n~l~~~~p~~l~~l--~~L~~L~Ls~n~l~~~~----p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 337 (968)
T PLN00113 264 YLFLYQNKLSGPIPPSIFSL--QKLISLDLSDNSLSGEI----PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337 (968)
T ss_pred EEECcCCeeeccCchhHhhc--cCcCEEECcCCeeccCC----ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEE
Confidence 66666666666666666666 66666666666665544 3444555555555555555555555555555555555
Q ss_pred EccCCcccccCC
Q 039925 307 SVSRNKLSASLP 318 (549)
Q Consensus 307 ~Ls~N~l~~~~p 318 (549)
++++|.+++.+|
T Consensus 338 ~L~~n~l~~~~p 349 (968)
T PLN00113 338 QLWSNKFSGEIP 349 (968)
T ss_pred ECcCCCCcCcCC
Confidence 555555554444
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-29 Score=248.26 Aligned_cols=270 Identities=19% Similarity=0.142 Sum_probs=151.6
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+.||+++|.++..-+..|-++++|+.+++.+|.++ .+|.......++ +.|+|.+|.|+..-.+.+..++.|+.|||+.
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl-~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHL-EKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccce-eEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 44666666655555555555666666666666555 555544444444 5555555555544444444445555555555
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc-------
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL------- 211 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~------- 211 (549)
|.|+..--.+|..-.++++|+|++|+|+..-...|.++. |..|.|++|+++ .+|...+++++.|+.|++..
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhccccceeeeh
Confidence 555422223333334444444444444444444444444 444444444444 44444333344444444433
Q ss_pred -----------------------------cccccc---------------cccCcccccEEEccccccccccChhhhhcc
Q 039925 212 -----------------------------LAQKLY---------------WSDVSTTATIIAMGGNQISGTITLGIKKLI 247 (549)
Q Consensus 212 -----------------------------~~~~l~---------------~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 247 (549)
.+.++. |+-....|+.|++++|.|....++.++..
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft- 316 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT- 316 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhc-
Confidence 011111 11223467777777777777777777777
Q ss_pred ccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC-------
Q 039925 248 FVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL------- 320 (549)
Q Consensus 248 ~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~------- 320 (549)
++|+.|+|++|+++ .++ +..|..+..|++|+|++|.+...-...|..+++|+.|||++|.++..|.+.
T Consensus 317 -qkL~~LdLs~N~i~-~l~---~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl 391 (873)
T KOG4194|consen 317 -QKLKELDLSSNRIT-RLD---EGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGL 391 (873)
T ss_pred -ccceeEeccccccc-cCC---hhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccc
Confidence 78888888888877 343 456667777777777777777544556677777777777777777655444
Q ss_pred ------CCCCCCCcccCCcccccc
Q 039925 321 ------NSQHNHSFSCPGFEFSVI 338 (549)
Q Consensus 321 ------~ls~N~~~~ip~~~~~~l 338 (549)
++.+|++..||...|..+
T Consensus 392 ~~LrkL~l~gNqlk~I~krAfsgl 415 (873)
T KOG4194|consen 392 PSLRKLRLTGNQLKSIPKRAFSGL 415 (873)
T ss_pred hhhhheeecCceeeecchhhhccC
Confidence 666777777766654444
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.94 E-value=1e-27 Score=236.59 Aligned_cols=267 Identities=19% Similarity=0.107 Sum_probs=199.5
Q ss_pred CCEEEccCCcceecCCccccCC--CCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEE
Q 039925 59 LRFINLVDNNFRGEIPEKVGRL--FRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMI 136 (549)
Q Consensus 59 L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 136 (549)
-+.||.+++.+...--..+... +.-+.|++++|++...-+..|.++++| +.+++.+|.++ .+|...+...+|+.|+
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nL-q~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNL-QEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcc-eeeeeccchhh-hcccccccccceeEEe
Confidence 3457888887763211122221 234679999999998888889999999 99999999998 7788777778899999
Q ss_pred eecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc-c--
Q 039925 137 FKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL-L-- 212 (549)
Q Consensus 137 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~-~-- 212 (549)
|.+|.|+..-.+++.-++.|+.|||+.|.|+...-.+|..-. +++|+|++|.|+..-...|. .+.+|..|.++. .
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~-~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFD-SLNSLLTLKLSRNRIT 210 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccccc-ccchheeeecccCccc
Confidence 999999988888899999999999999999955545666544 99999999999944444444 888999999987 1
Q ss_pred ---------ccccccc---------------cCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCc
Q 039925 213 ---------AQKLYWS---------------DVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHH 268 (549)
Q Consensus 213 ---------~~~l~~l---------------~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~ 268 (549)
+..++.+ +..++|+.|.|..|.+....-..|-.+ .++++|+|+.|+++..-
T Consensus 211 tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l--~kme~l~L~~N~l~~vn--- 285 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGL--EKMEHLNLETNRLQAVN--- 285 (873)
T ss_pred ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeee--cccceeecccchhhhhh---
Confidence 2222222 122355555555565554444556666 78888888888887333
Q ss_pred CccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCCCcccCCcc
Q 039925 269 IASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNHSFSCPGFE 334 (549)
Q Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~~~ 334 (549)
..++-++++|+.|+||+|.|...-++++...++|+.|+|++|+|+..-+.. ++++|.+..+-+..
T Consensus 286 -~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~a 360 (873)
T KOG4194|consen 286 -EGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGA 360 (873)
T ss_pred -cccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhH
Confidence 467788999999999999999888889999999999999999998533322 66677655554444
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.93 E-value=3e-28 Score=241.85 Aligned_cols=290 Identities=19% Similarity=0.260 Sum_probs=185.7
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeeccccccc-ccCCcccccccCccceeeeccccccccccccc
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFS-GKIPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
.+|+.++.+.+|++|.+++|++. .+-..++.|+.|+.+++.+|++. .-+|..++.+..| ..||||+|++. ..|..+
T Consensus 46 ~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dL-t~lDLShNqL~-EvP~~L 122 (1255)
T KOG0444|consen 46 QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDL-TILDLSHNQLR-EVPTNL 122 (1255)
T ss_pred hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccc-eeeecchhhhh-hcchhh
Confidence 45666666666666666666666 44455666666666666666654 2356666666666 66666666665 556666
Q ss_pred CCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCc
Q 039925 127 GNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGR 205 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~ 205 (549)
..-+++-+|+||+|+|..+...-|-+++.|-.|+|++|++. .+|..+..+. |++|.|++|.+...--..+. .+++|+
T Consensus 123 E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-smtsL~ 200 (1255)
T KOG0444|consen 123 EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLP-SMTSLS 200 (1255)
T ss_pred hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCc-cchhhh
Confidence 66666666666666666332233456666666666666665 4555566666 66666666665421111111 455566
Q ss_pred Eeeecccccccc----cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCe
Q 039925 206 NYYILLLAQKLY----WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTY 281 (549)
Q Consensus 206 ~L~l~~~~~~l~----~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~ 281 (549)
.|++++.-..+. .+.-..+|..+|++.|.+. .+|+.+-++ ++|+.|+||+|.|+ . +....+...+|++
T Consensus 201 vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l--~~LrrLNLS~N~it-e----L~~~~~~W~~lEt 272 (1255)
T KOG0444|consen 201 VLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKL--RNLRRLNLSGNKIT-E----LNMTEGEWENLET 272 (1255)
T ss_pred hhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhh--hhhheeccCcCcee-e----eeccHHHHhhhhh
Confidence 666665222111 2223347788888888887 678888888 88888888888887 2 2344556677777
Q ss_pred eeccCccccccCCccccCCCCCCEEEccCCccc-ccCCCC---------------------------------CCCCCCC
Q 039925 282 LALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS-ASLPPL---------------------------------NSQHNHS 327 (549)
Q Consensus 282 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~---------------------------------~ls~N~~ 327 (549)
|+||.|+++ .+|++++++++|+.|.+.+|+++ .-||++ .+++|++
T Consensus 273 LNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 273 LNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred hccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhhhhhHHHHHhcccccce
Confidence 788888777 67777777777777777777765 124544 7777777
Q ss_pred cccCCcc--cccccceeeecCCCCCCC
Q 039925 328 FSCPGFE--FSVIKLEFQIPGNKKLCG 352 (549)
Q Consensus 328 ~~ip~~~--~~~l~l~~~~~gn~~~c~ 352 (549)
-++|..+ +..++. +++..||.+--
T Consensus 352 iTLPeaIHlL~~l~v-LDlreNpnLVM 377 (1255)
T KOG0444|consen 352 ITLPEAIHLLPDLKV-LDLRENPNLVM 377 (1255)
T ss_pred eechhhhhhcCCcce-eeccCCcCccC
Confidence 7777777 555554 67788887763
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=5e-27 Score=233.19 Aligned_cols=292 Identities=22% Similarity=0.275 Sum_probs=191.2
Q ss_pred cCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcc-cccccCccceeeecccccccccccccC
Q 039925 49 LTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPAN-LSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 49 lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~-l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
||+.+..+..|++||||+|+++ ..|..+...+++-+|+||+|+|. .+|.. |-++..| -+||||+|++. .+|..+.
T Consensus 95 iP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDL-LfLDLS~NrLe-~LPPQ~R 170 (1255)
T KOG0444|consen 95 IPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDL-LFLDLSNNRLE-MLPPQIR 170 (1255)
T ss_pred CCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhH-hhhccccchhh-hcCHHHH
Confidence 4444444444444444444444 44444444444444444444444 34433 2344444 44444444444 3333344
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcce-ecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCc
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFS-GLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGR 205 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~ 205 (549)
.+..|++|+|++|.+.-.--..+..|++|+.|.+++.+-+ ..+|.++..+. |..+|++.|.+. .+|+.+. ++++|+
T Consensus 171 RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly-~l~~Lr 248 (1255)
T KOG0444|consen 171 RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLY-KLRNLR 248 (1255)
T ss_pred HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHh-hhhhhh
Confidence 4444444444444443111122233444444444443322 35788888888 999999999998 8999998 999999
Q ss_pred Eeeecc-ccccccc-ccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeee
Q 039925 206 NYYILL-LAQKLYW-SDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLA 283 (549)
Q Consensus 206 ~L~l~~-~~~~l~~-l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~ 283 (549)
.|+++. .++.+.. ...-.+|++|+++.|+++ .+|+.+.++ ++|+.|.+.+|+++-. -||..++.+..|+.+.
T Consensus 249 rLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL--~kL~kLy~n~NkL~Fe---GiPSGIGKL~~Levf~ 322 (1255)
T KOG0444|consen 249 RLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL--TKLTKLYANNNKLTFE---GIPSGIGKLIQLEVFH 322 (1255)
T ss_pred eeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhh--HHHHHHHhccCccccc---CCccchhhhhhhHHHH
Confidence 999987 3444431 122348999999999998 789999999 9999999999998743 3588999999999999
Q ss_pred ccCccccccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCCCcccCCcc------cccccceeeecCC
Q 039925 284 LDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNHSFSCPGFE------FSVIKLEFQIPGN 347 (549)
Q Consensus 284 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~~~------~~~l~l~~~~~gn 347 (549)
.++|.+. .+|..++.+..|+.|.|+.|++-. +|+. |+..|.--.+|+.- +...++.+++..-
T Consensus 323 aanN~LE-lVPEglcRC~kL~kL~L~~NrLiT-LPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNIDFSLq~Q 400 (1255)
T KOG0444|consen 323 AANNKLE-LVPEGLCRCVKLQKLKLDHNRLIT-LPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNIDFSLQHQ 400 (1255)
T ss_pred hhccccc-cCchhhhhhHHHHHhcccccceee-chhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeecceehhhH
Confidence 9999998 899999999999999999999874 5554 88899866666654 2222444455544
Q ss_pred CCCCCCc
Q 039925 348 KKLCGGL 354 (549)
Q Consensus 348 ~~~c~~~ 354 (549)
-.+.|..
T Consensus 401 lrlAG~~ 407 (1255)
T KOG0444|consen 401 LRLAGQM 407 (1255)
T ss_pred HhhccCC
Confidence 4555543
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=1.3e-26 Score=219.55 Aligned_cols=260 Identities=26% Similarity=0.335 Sum_probs=165.0
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccc----------------------cCCccccccc
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSG----------------------KIPANLSHCS 105 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~----------------------~~p~~l~~l~ 105 (549)
++|++++.+..++.|+.+.|+++ .+|+.+..+.+|+.|+.++|++.. .+|.+++.+.
T Consensus 82 ~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~ 160 (565)
T KOG0472|consen 82 QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLS 160 (565)
T ss_pred hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhccccccccCchHHHHHH
Confidence 45555555555555555555555 455555555555555555555440 4444444444
Q ss_pred CccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeC
Q 039925 106 NLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFL 184 (549)
Q Consensus 106 ~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l 184 (549)
++ ..|++.+|+++...|..+. ++.|++||...|-++ .+|+.++.+.+|+-|+|..|++. .+| .|.+++ |++|++
T Consensus 161 ~l-~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~ 235 (565)
T KOG0472|consen 161 KL-SKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHV 235 (565)
T ss_pred HH-HHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHh
Confidence 44 5555555555533333333 666666666666666 67777777777777777777776 555 677777 777777
Q ss_pred CCCcCcccCchhhhhcCCCCcEeeecc-cccccc-cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCccc
Q 039925 185 PENSFTGNLPLEIGVTLPKGRNYYILL-LAQKLY-WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLS 262 (549)
Q Consensus 185 ~~n~l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~-~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~ 262 (549)
+.|++. .+|.+....++++..|++.. .++.+. .+-..++|++||+++|.++ .+|..++++ +|+.|-+.+|.+.
T Consensus 236 g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl---hL~~L~leGNPlr 310 (565)
T KOG0472|consen 236 GENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL---HLKFLALEGNPLR 310 (565)
T ss_pred cccHHH-hhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccc-cCCcccccc---eeeehhhcCCchH
Confidence 777777 77777776777777777765 233222 1223346777777777776 344455554 4555556666442
Q ss_pred cc------------------------------------------------------------------------------
Q 039925 263 GP------------------------------------------------------------------------------ 264 (549)
Q Consensus 263 ~~------------------------------------------------------------------------------ 264 (549)
..
T Consensus 311 TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~V 390 (565)
T KOG0472|consen 311 TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIV 390 (565)
T ss_pred HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcce
Confidence 10
Q ss_pred ------------CCC--------------------cCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCc
Q 039925 265 ------------IPH--------------------HIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNK 312 (549)
Q Consensus 265 ------------~p~--------------------~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 312 (549)
+|. ++|..+..+++|..|+|++|-+. .+|..++.+..|+.||+++|+
T Consensus 391 t~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~Nr 469 (565)
T KOG0472|consen 391 TSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNR 469 (565)
T ss_pred EEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccc
Confidence 000 66777788999999999999998 799999999999999999998
Q ss_pred ccccCCCC
Q 039925 313 LSASLPPL 320 (549)
Q Consensus 313 l~~~~p~~ 320 (549)
|.. +|..
T Consensus 470 Fr~-lP~~ 476 (565)
T KOG0472|consen 470 FRM-LPEC 476 (565)
T ss_pred ccc-chHH
Confidence 873 4443
No 8
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.4e-22 Score=200.89 Aligned_cols=142 Identities=31% Similarity=0.467 Sum_probs=117.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCc-e
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGID-F 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~-~ 435 (549)
.||++|+..++||+|+||.||+|.+.++.. +|||.+ .+ .
T Consensus 72 ~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e-----~~~~ 146 (361)
T KOG1187|consen 72 KATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLE-----GGEH 146 (361)
T ss_pred HHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEec-----CCce
Confidence 799999999999999999999999987532 799998 66 5
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-------------------------------
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR------------------------------- 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH------------------------------- 484 (549)
.+||||||++|+|.++|+... .. +++|.+|++||.|+|+||+|||
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~---~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFG 222 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKK---GE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFG 222 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCC---CC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCcc
Confidence 999999999999999999765 12 8999999999999999999999
Q ss_pred -------------------------------------------------------cc---------------cc-CCcce
Q 039925 485 -------------------------------------------------------VK---------------MA-LPEKV 493 (549)
Q Consensus 485 -------------------------------------------------------~~---------------~~-~~~~~ 493 (549)
.. .. ....+
T Consensus 223 La~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~ 302 (361)
T KOG1187|consen 223 LAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKL 302 (361)
T ss_pred CcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcch
Confidence 00 00 00135
Q ss_pred eeeccCccc-chHH--HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 494 MEIVESSLL-LEIE--DCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 494 ~~~~~~~~~-~~~~--~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
.+++|+.+. .... +++.++.++|.+|++.+|.+||+|.||++.|+.+..
T Consensus 303 ~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 303 REIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred hheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 677777765 3322 688899999999999999999999999999976653
No 9
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.85 E-value=2.6e-24 Score=203.96 Aligned_cols=249 Identities=27% Similarity=0.346 Sum_probs=176.1
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+-+.+.++..|.+|++.+|++. .+|.+++.+..++.|+.++|++. .+|+.+..+.++ ..|+.++|.+. .+|+.++
T Consensus 59 ~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l-~~l~~s~n~~~-el~~~i~ 134 (565)
T KOG0472|consen 59 VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISL-VKLDCSSNELK-ELPDSIG 134 (565)
T ss_pred hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhh-hhhhcccccee-ecCchHH
Confidence 34556778888888888888888 78888888888888888888888 788888888888 88888888887 5677788
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcE
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRN 206 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 206 (549)
.+..|+.++..+|+++ .+|+.+.++.+|..|++.+|++....|..+. ++ |++||...|-+. .+|+.++ .+.+|..
T Consensus 135 ~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg-~l~~L~~ 210 (565)
T KOG0472|consen 135 RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELG-GLESLEL 210 (565)
T ss_pred HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhc-chhhhHH
Confidence 8888888888888888 7788888888888888888888855555555 77 888888888887 7888887 6666666
Q ss_pred eeecc-cccccccccCcccccEEEccccccccccChhh-hhccccCccEEEcCCCcccccCCCcCccccCCccccCeeec
Q 039925 207 YYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGI-KKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLAL 284 (549)
Q Consensus 207 L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~-~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~L 284 (549)
|++.. .+..+..+..+..|..|.++.|++. .+|... ..+ +++..|||.+|+++ ++|..+.-+.+|++||+
T Consensus 211 LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L--~~l~vLDLRdNklk-----e~Pde~clLrsL~rLDl 282 (565)
T KOG0472|consen 211 LYLRRNKIRFLPEFPGCSLLKELHVGENQIE-MLPAEHLKHL--NSLLVLDLRDNKLK-----EVPDEICLLRSLERLDL 282 (565)
T ss_pred HHhhhcccccCCCCCccHHHHHHHhcccHHH-hhHHHHhccc--ccceeeeccccccc-----cCchHHHHhhhhhhhcc
Confidence 55554 3444444444445555666666555 233332 345 55566666666655 22455555555666666
Q ss_pred cCccccccCCccccCCCCCCEEEccCCccc
Q 039925 285 DNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 285 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
|+|.|+ .+|.+++++ .|+.|-+.+|.+.
T Consensus 283 SNN~is-~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 283 SNNDIS-SLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred cCCccc-cCCcccccc-eeeehhhcCCchH
Confidence 666665 455555555 5666666665554
No 10
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=1.3e-20 Score=203.17 Aligned_cols=294 Identities=20% Similarity=0.262 Sum_probs=188.9
Q ss_pred hhHHHHHHHHhhcCCCC---CCCCCCCCCCCCCCCCc----------------ceeCCCC---CceEeecC---------
Q 039925 2 TDHLALLAIKSLLHDRR---GVTSSWSNSIDLCQWRG----------------VTCTHQH---QRINKCLT--------- 50 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~---~~~~~w~~~~~~c~w~g----------------v~c~~~~---~~v~g~lp--------- 50 (549)
+|...++++++.|+.|. ....+|+..++||.-.. |.|.+.. .+++|...
T Consensus 63 ~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~~~~~~~ 142 (754)
T PRK15370 63 EEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSASGSKD 142 (754)
T ss_pred HHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccccccCCCCCC
Confidence 35677889999998774 23345999999996544 6675431 12221110
Q ss_pred ------------------------ccc-----cCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCccc
Q 039925 51 ------------------------PHV-----GNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANL 101 (549)
Q Consensus 51 ------------------------~~~-----~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l 101 (549)
.++ +-..+...|+++++.++ .+|..+. ++|+.|+|++|+|+ .+|..+
T Consensus 143 ~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l 218 (754)
T PRK15370 143 AVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENL 218 (754)
T ss_pred hhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhh
Confidence 000 11245678888888888 6776553 57888888888888 677665
Q ss_pred ccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccccce
Q 039925 102 SHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNISLKW 181 (549)
Q Consensus 102 ~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~L~~ 181 (549)
. .+| +.|++++|+++ .+|..+. .+|+.|+|++|.+. .+|..+. .+|+.|++++|++. .+|..+.. .|+.
T Consensus 219 ~--~nL-~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~~-sL~~ 287 (754)
T PRK15370 219 Q--GNI-KTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLPE-ELRY 287 (754)
T ss_pred c--cCC-CEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccCC-CCcE
Confidence 4 477 88888888887 4455442 47888888888887 6776664 47888888888887 45654431 2888
Q ss_pred eeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcc
Q 039925 182 NFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKL 261 (549)
Q Consensus 182 L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l 261 (549)
|++++|+++ .+|..+. ++|+.|++++|.++. +|..+. ++|+.|++++|.+
T Consensus 288 L~Ls~N~Lt-~LP~~lp------------------------~sL~~L~Ls~N~Lt~-LP~~l~----~sL~~L~Ls~N~L 337 (754)
T PRK15370 288 LSVYDNSIR-TLPAHLP------------------------SGITHLNVQSNSLTA-LPETLP----PGLKTLEAGENAL 337 (754)
T ss_pred EECCCCccc-cCcccch------------------------hhHHHHHhcCCcccc-CCcccc----ccceeccccCCcc
Confidence 888888887 4554332 256667777777763 343321 5677777777777
Q ss_pred cccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC--------CCCCCCCcccCCc
Q 039925 262 SGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL--------NSQHNHSFSCPGF 333 (549)
Q Consensus 262 ~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--------~ls~N~~~~ip~~ 333 (549)
++ +| ..+ .++|+.|++++|+++ .+|..+. ++|+.|+|++|+++. +|.. ++++|++..+|..
T Consensus 338 t~-LP----~~l--~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~~sL~~LdLs~N~L~~LP~s 406 (754)
T PRK15370 338 TS-LP----ASL--PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLPAALQIMQASRNNLVRLPES 406 (754)
T ss_pred cc-CC----hhh--cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHHHHHHHHhhccCCcccCchh
Confidence 63 43 222 256777777777776 4665543 577777777777774 4433 6777777777765
Q ss_pred cccc--c--c-ceeeecCCCCCC
Q 039925 334 EFSV--I--K-LEFQIPGNKKLC 351 (549)
Q Consensus 334 ~~~~--l--~-l~~~~~gn~~~c 351 (549)
+... . . ..+.+.+||...
T Consensus 407 l~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 407 LPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHhhcCCCccEEEeeCCCccH
Confidence 5111 0 1 126677787644
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.82 E-value=3.4e-22 Score=189.46 Aligned_cols=291 Identities=20% Similarity=0.220 Sum_probs=205.7
Q ss_pred ceeCCCC-CceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeec
Q 039925 36 VTCTHQH-QRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFIC 114 (549)
Q Consensus 36 v~c~~~~-~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls 114 (549)
|.|+.++ ..|...+|+ .-..++|..|.|+...|.+|+.+++|+.||||+|.|+.+-|++|.++.++.+.++.+
T Consensus 51 VdCr~~GL~eVP~~LP~------~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg 124 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPP------ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYG 124 (498)
T ss_pred EEccCCCcccCcccCCC------cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhc
Confidence 6675432 223344444 456799999999955566999999999999999999988899999999995556666
Q ss_pred ccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCccc-
Q 039925 115 ETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGN- 192 (549)
Q Consensus 115 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~- 192 (549)
+|+|+...-+.|+++.+|+.|.+.-|++.-...+.|..+++|..|.+.+|.+....-..|..+. ++.+.+..|.+...
T Consensus 125 ~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdC 204 (498)
T KOG4237|consen 125 NNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDC 204 (498)
T ss_pred CCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccc
Confidence 6999988788999999999999999999977788999999999999999999855555888998 99999998884311
Q ss_pred -----------CchhhhhcCCCCcEeeecc-cccccccccCcccccEE--Ec-cccccccccC-hhhhhccccCccEEEc
Q 039925 193 -----------LPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATII--AM-GGNQISGTIT-LGIKKLIFVNLYALTM 256 (549)
Q Consensus 193 -----------~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L--~l-~~n~l~~~~~-~~~~~l~~~~L~~L~L 256 (549)
.|.+++ ...-.....+.+ .+.....-.+...++.+ .+ +.....+.-| ..|..+ ++|+.|+|
T Consensus 205 nL~wla~~~a~~~iets-garc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L--~~L~~lnl 281 (498)
T KOG4237|consen 205 NLPWLADDLAMNPIETS-GARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKL--PNLRKLNL 281 (498)
T ss_pred ccchhhhHHhhchhhcc-cceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhc--ccceEecc
Confidence 111111 011000000000 00000000000011111 11 1121222333 468888 99999999
Q ss_pred CCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCCCCCCCCCcccCCcccc
Q 039925 257 VKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPGFEFS 336 (549)
Q Consensus 257 ~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~ 336 (549)
++|++++.- +.+|..+.++++|.|..|+|...-...|.++..|+.|+|++|+|+...|-. |.
T Consensus 282 snN~i~~i~----~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~a--------------F~ 343 (498)
T KOG4237|consen 282 SNNKITRIE----DGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGA--------------FQ 343 (498)
T ss_pred CCCccchhh----hhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccc--------------cc
Confidence 999999554 578999999999999999998666678999999999999999999755532 22
Q ss_pred cc-cc-eeeecCCCCCCCC
Q 039925 337 VI-KL-EFQIPGNKKLCGG 353 (549)
Q Consensus 337 ~l-~l-~~~~~gn~~~c~~ 353 (549)
.+ .+ ++++.+||+.|..
T Consensus 344 ~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 344 TLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred ccceeeeeehccCcccCcc
Confidence 11 11 1678899999953
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.82 E-value=2.7e-19 Score=205.65 Aligned_cols=80 Identities=21% Similarity=0.212 Sum_probs=39.7
Q ss_pred CccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC-------CC
Q 039925 250 NLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL-------NS 322 (549)
Q Consensus 250 ~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-------~l 322 (549)
+|+.|+|++|...+.+ |.+++++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. ++
T Consensus 779 sL~~L~Ls~n~~l~~l----P~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~L 853 (1153)
T PLN03210 779 SLTRLFLSDIPSLVEL----PSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNL 853 (1153)
T ss_pred cchheeCCCCCCcccc----ChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccccCEeEC
Confidence 4555555555443333 4455555566666665553333455443 4555555555555433333321 55
Q ss_pred CCCCCcccCCcc
Q 039925 323 QHNHSFSCPGFE 334 (549)
Q Consensus 323 s~N~~~~ip~~~ 334 (549)
++|.+..+|..+
T Consensus 854 s~n~i~~iP~si 865 (1153)
T PLN03210 854 SRTGIEEVPWWI 865 (1153)
T ss_pred CCCCCccChHHH
Confidence 555555555544
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=3e-22 Score=208.23 Aligned_cols=288 Identities=23% Similarity=0.282 Sum_probs=179.1
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCcc-------------------
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLL------------------- 108 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~------------------- 108 (549)
.+|.+..++.+|++|.|.+|.+. .+|.++..+++|++|++++|++. .+|..+..+..+.
T Consensus 82 ~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik 159 (1081)
T KOG0618|consen 82 SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIK 159 (1081)
T ss_pred hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccch
Confidence 45666677777777777777666 67777777777777777777776 4553332222110
Q ss_pred --------------------ce-eeecccccccccccc---------------------------------------cCC
Q 039925 109 --------------------TK-LFICETHLSGQLLDF---------------------------------------IGN 128 (549)
Q Consensus 109 --------------------~~-L~Ls~n~l~~~~~~~---------------------------------------~~~ 128 (549)
++ |+|.+|.+....-.. -.-
T Consensus 160 ~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~ 239 (1081)
T KOG0618|consen 160 KLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPV 239 (1081)
T ss_pred hhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccc
Confidence 22 444444433100000 001
Q ss_pred CCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEe
Q 039925 129 PSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNY 207 (549)
Q Consensus 129 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L 207 (549)
-.+|+++++++|+++ .+|+++..+.+|+.|+..+|++. .+|..+...+ |+.|.+..|.+. .+|.... .+++|++|
T Consensus 240 p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le-~~~sL~tL 315 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLE-GLKSLRTL 315 (1081)
T ss_pred cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccc-ccceeeee
Confidence 235666677777776 67788888888999988888885 5555555555 666666666666 5555544 56666666
Q ss_pred eecc-cc-------------------------cccccc--cCcccccEEEccccccccccChhhhhccccCccEEEcCCC
Q 039925 208 YILL-LA-------------------------QKLYWS--DVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKN 259 (549)
Q Consensus 208 ~l~~-~~-------------------------~~l~~l--~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n 259 (549)
++.. ++ ..+... ...+.|+.|.+.+|.+++..-..+.++ ++|+.|+|++|
T Consensus 316 dL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~--~hLKVLhLsyN 393 (1081)
T KOG0618|consen 316 DLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNF--KHLKVLHLSYN 393 (1081)
T ss_pred eehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccc--cceeeeeeccc
Confidence 6654 11 111100 122467778888888887666667777 88888888888
Q ss_pred cccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC---------CCCCCCCcc-
Q 039925 260 KLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL---------NSQHNHSFS- 329 (549)
Q Consensus 260 ~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~---------~ls~N~~~~- 329 (549)
++. .+| ...+.++..|++|+||+|+++ .+|..+..++.|++|...+|++.. .|.. |+|.|++..
T Consensus 394 rL~-~fp---as~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~-fPe~~~l~qL~~lDlS~N~L~~~ 467 (1081)
T KOG0618|consen 394 RLN-SFP---ASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS-FPELAQLPQLKVLDLSCNNLSEV 467 (1081)
T ss_pred ccc-cCC---HHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee-chhhhhcCcceEEecccchhhhh
Confidence 886 554 355677888888888888888 677777777777777777777763 4433 777777432
Q ss_pred -cCCccc-ccccceeeecCCCCC
Q 039925 330 -CPGFEF-SVIKLEFQIPGNKKL 350 (549)
Q Consensus 330 -ip~~~~-~~l~l~~~~~gn~~~ 350 (549)
+|...- ..|+. +++.||+++
T Consensus 468 ~l~~~~p~p~Lky-LdlSGN~~l 489 (1081)
T KOG0618|consen 468 TLPEALPSPNLKY-LDLSGNTRL 489 (1081)
T ss_pred hhhhhCCCcccce-eeccCCccc
Confidence 333331 33333 667777753
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=2.8e-19 Score=191.63 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=154.8
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEe
Q 039925 58 YLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIF 137 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 137 (549)
.-..|++++|.++ .+|..+. ++|+.|++++|+++ .+|.. .++| ++|++++|+|+. +|.. .++|+.|++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~L-k~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPEL-RTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCC-cEEEecCCccCc-ccCc---ccccceeec
Confidence 3456667777666 5666554 35667777777666 45542 3556 667777776663 3322 356666677
Q ss_pred ecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc-cccc
Q 039925 138 KENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL-LAQK 215 (549)
Q Consensus 138 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~-~~~~ 215 (549)
++|.++ .+|.. .++|+.|++++|+++ .+|.. .+ |+.|++++|+++ .+|.. ..+|+.|++++ .+..
T Consensus 270 s~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~-~Lp~l----p~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 270 FSNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLA-SLPAL----PSELCKLWAYNNQLTS 336 (788)
T ss_pred cCCchh-hhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCccc-cCCCC----cccccccccccCcccc
Confidence 766666 44432 245666666666665 33331 23 666677666666 34431 12345555554 2222
Q ss_pred cccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCc
Q 039925 216 LYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPS 295 (549)
Q Consensus 216 l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~ 295 (549)
+. ..+.+|+.|+|++|+++. +|.. . .+|+.|++++|.++ .+| .. ..+|+.|++++|+++ .+|.
T Consensus 337 LP--~lp~~Lq~LdLS~N~Ls~-LP~l---p--~~L~~L~Ls~N~L~-~LP----~l---~~~L~~LdLs~N~Lt-~LP~ 399 (788)
T PRK15387 337 LP--TLPSGLQELSVSDNQLAS-LPTL---P--SELYKLWAYNNRLT-SLP----AL---PSGLKELIVSGNRLT-SLPV 399 (788)
T ss_pred cc--ccccccceEecCCCccCC-CCCC---C--cccceehhhccccc-cCc----cc---ccccceEEecCCccc-CCCC
Confidence 22 123478899999999885 4432 2 67888899999887 353 22 256889999999988 4665
Q ss_pred cccCCCCCCEEEccCCcccccCCCC-------CCCCCCCcccCCcc--cccccceeeecCCCCCC
Q 039925 296 SLGYYQNLMELSVSRNKLSASLPPL-------NSQHNHSFSCPGFE--FSVIKLEFQIPGNKKLC 351 (549)
Q Consensus 296 ~l~~l~~L~~L~Ls~N~l~~~~p~~-------~ls~N~~~~ip~~~--~~~l~l~~~~~gn~~~c 351 (549)
. .++|+.|++++|++++ +|.. ++++|++.++|..+ +..+.. +++.+|+.-.
T Consensus 400 l---~s~L~~LdLS~N~Lss-IP~l~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~-LdLs~N~Ls~ 459 (788)
T PRK15387 400 L---PSELKELMVSGNRLTS-LPMLPSGLLSLSVYRNQLTRLPESLIHLSSETT-VNLEGNPLSE 459 (788)
T ss_pred c---ccCCCEEEccCCcCCC-CCcchhhhhhhhhccCcccccChHHhhccCCCe-EECCCCCCCc
Confidence 3 3678899999999885 5643 88899999999876 344433 7788887543
No 15
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.79 E-value=1e-19 Score=180.51 Aligned_cols=141 Identities=23% Similarity=0.331 Sum_probs=110.7
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-ce---------------------------------eEEEeccccCCCceEEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-WT---------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~---------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.+.+...+.||+|-||.||.|.|.+. .+ +|+|.. +++++||
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-----~~piyIV 279 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-----QEPIYIV 279 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEec-----CCceEEE
Confidence 34455667899999999999999765 22 789988 7789999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-----------------------------------
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR----------------------------------- 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH----------------------------------- 484 (549)
||||++|+|.++|+... +..+.-.+.+.+|.|||+||+||+
T Consensus 280 tE~m~~GsLl~yLr~~~----~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTRE----GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EEecccCcHHHHhhhcC----CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCC
Confidence 99999999999999733 467889999999999999999998
Q ss_pred -------------------------------------------c--cccCCc----ceeeeccCcc-cchHHHHHHHHHH
Q 039925 485 -------------------------------------------V--KMALPE----KVMEIVESSL-LLEIEDCLVSVLT 514 (549)
Q Consensus 485 -------------------------------------------~--~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~ 514 (549)
. ...+++ .+.+.++.+. .+.|+.||.++++
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~ 435 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYE 435 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHH
Confidence 0 001111 1222223322 3456889999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHhhhh
Q 039925 515 IGILCSVESPSERMEKPYIVSKLSHAREN 543 (549)
Q Consensus 515 l~~~C~~~~P~~RP~~~~v~~~L~~~~~~ 543 (549)
+|..||+.+|++||||..+...++.+...
T Consensus 436 lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 436 LMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 99999999999999999999988887653
No 16
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.78 E-value=3.1e-18 Score=196.94 Aligned_cols=106 Identities=19% Similarity=0.181 Sum_probs=56.8
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEE
Q 039925 56 FGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVM 135 (549)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L 135 (549)
..+|+.|++++|.+. .+|..+..+++|+.|+|++|...+.+|. +..+++| +.|+|++|.....+|..++++++|+.|
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~L-e~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNL-ETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcc-cEEEecCCCCccccchhhhccCCCCEE
Confidence 345555555555555 4555555556666666655543334443 4555555 666666555444555555566666666
Q ss_pred EeecceeeeeCCccccCCCCCCEEecccCc
Q 039925 136 IFKENSLEGKFPNTLSNLRSLFYDNINRNE 165 (549)
Q Consensus 136 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 165 (549)
++++|...+.+|..+ ++++|++|++++|.
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~ 715 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCS 715 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCC
Confidence 665543333444433 45555555555543
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=7.6e-19 Score=189.47 Aligned_cols=231 Identities=21% Similarity=0.316 Sum_probs=177.5
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|+++ .+|..+. .+| +.|+|++|++. .+|..+.
T Consensus 192 sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L-~~L~Ls~N~L~-~LP~~l~ 261 (754)
T PRK15370 192 TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTI-QEMELSINRIT-ELPERLP 261 (754)
T ss_pred cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccc-cEEECcCCccC-cCChhHh
Confidence 5666553 47999999999999 7887664 58999999999999 6887664 367 99999999998 5666553
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcE
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRN 206 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 206 (549)
.+|+.|++++|+++ .+|..+. ++|+.|++++|+++. +|..+. + |+.|++++|.++ .+|..+. ++|+.
T Consensus 262 --s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~ 329 (754)
T PRK15370 262 --SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETLP---PGLKT 329 (754)
T ss_pred --CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCcccc---cccee
Confidence 58999999999999 6787664 589999999999984 554432 3 999999999998 5776543 57888
Q ss_pred eeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeecc
Q 039925 207 YYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALD 285 (549)
Q Consensus 207 L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls 285 (549)
|++++ .+..+.. .++++|+.|++++|+++ .+|..+. ++|+.|+|++|.++ .+| ..+. .+|+.|+++
T Consensus 330 L~Ls~N~Lt~LP~-~l~~sL~~L~Ls~N~L~-~LP~~lp----~~L~~LdLs~N~Lt-~LP----~~l~--~sL~~LdLs 396 (754)
T PRK15370 330 LEAGENALTSLPA-SLPPELQVLDVSKNQIT-VLPETLP----PTITTLDVSRNALT-NLP----ENLP--AALQIMQAS 396 (754)
T ss_pred ccccCCccccCCh-hhcCcccEEECCCCCCC-cCChhhc----CCcCEEECCCCcCC-CCC----HhHH--HHHHHHhhc
Confidence 88877 3333321 23468999999999987 4565442 68999999999988 454 3332 368899999
Q ss_pred CccccccCCccc----cCCCCCCEEEccCCccc
Q 039925 286 NNKLQGNLPSSL----GYYQNLMELSVSRNKLS 314 (549)
Q Consensus 286 ~N~l~~~~p~~l----~~l~~L~~L~Ls~N~l~ 314 (549)
+|++. .+|..+ ..++.+..|++.+|.++
T Consensus 397 ~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 397 RNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred cCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 99998 566544 34588899999999986
No 18
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.76 E-value=2.3e-20 Score=194.34 Aligned_cols=238 Identities=23% Similarity=0.221 Sum_probs=149.8
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEE
Q 039925 56 FGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVM 135 (549)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L 135 (549)
.-+|+.||+++|.+. ..|..+..+.+|+.|+++.|.|. .+|.+..++.+| ++|.|.+|.+. .+|..+..+.+|++|
T Consensus 44 ~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l-~~lnL~~n~l~-~lP~~~~~lknl~~L 119 (1081)
T KOG0618|consen 44 RVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNL-QYLNLKNNRLQ-SLPASISELKNLQYL 119 (1081)
T ss_pred eeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcc-hhheeccchhh-cCchhHHhhhccccc
Confidence 344888888888888 78888888888888888888888 788888888888 88888888877 678888888888888
Q ss_pred EeecceeeeeCCccccCCCCCCEEecccC-------------------cceecccccccccccce-eeCCCCcCcccCch
Q 039925 136 IFKENSLEGKFPNTLSNLRSLFYDNINRN-------------------EFSGLIPSFIFNISLKW-NFLPENSFTGNLPL 195 (549)
Q Consensus 136 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-------------------~l~~~~p~~~~~l~L~~-L~l~~n~l~~~~p~ 195 (549)
++++|.+. .+|..+..++.+..+..++| .+.+.++..+.. +++ |+|++|.+. .+..
T Consensus 120 dlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~--l~~~ldLr~N~~~-~~dl 195 (1081)
T KOG0618|consen 120 DLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYN--LTHQLDLRYNEME-VLDL 195 (1081)
T ss_pred ccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhh--hheeeecccchhh-hhhh
Confidence 88888887 77777777766666666666 222222221111 333 666666654 2211
Q ss_pred hhhhcCCCCcEeeecc-----------c----------ccccccccCcccccEEEccccccccccChhhhhccccCccEE
Q 039925 196 EIGVTLPKGRNYYILL-----------L----------AQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYAL 254 (549)
Q Consensus 196 ~~~~~l~~L~~L~l~~-----------~----------~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L 254 (549)
. .+++|+.++... . +..+..-..+.+|+++++++|++++ +|.++..+ .+|+.|
T Consensus 196 s---~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~--~nle~l 269 (1081)
T KOG0618|consen 196 S---NLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSN-LPEWIGAC--ANLEAL 269 (1081)
T ss_pred h---hccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhc-chHHHHhc--ccceEe
Confidence 1 333333333322 1 1111111334578889999999884 56888888 899999
Q ss_pred EcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcc
Q 039925 255 TMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKL 313 (549)
Q Consensus 255 ~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 313 (549)
+..+|+++ .+| ..+..+++|+.|++.+|.+. -+|+....++.|+.|+|..|+|
T Consensus 270 ~~n~N~l~-~lp----~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L 322 (1081)
T KOG0618|consen 270 NANHNRLV-ALP----LRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNL 322 (1081)
T ss_pred cccchhHH-hhH----HHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccc
Confidence 99999886 443 33333333333333333333 2333333334444444444433
No 19
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.76 E-value=2.6e-18 Score=184.20 Aligned_cols=228 Identities=20% Similarity=0.244 Sum_probs=139.9
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+|+.+. ++|+.|++++|+++ .+|.. .++|++|+|++|+|+ .+|.. .++| +.|++++|.++. +|..
T Consensus 215 sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL-~~L~Ls~N~L~~-Lp~l-- 280 (788)
T PRK15387 215 TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGL-LELSIFSNPLTH-LPAL-- 280 (788)
T ss_pred cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---cccc-ceeeccCCchhh-hhhc--
Confidence 5677665 37888888888888 56642 477888888888887 56643 2455 666666666552 2221
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCccee-------------------cccccccccc-cceeeCCCC
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSG-------------------LIPSFIFNIS-LKWNFLPEN 187 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-------------------~~p~~~~~l~-L~~L~l~~n 187 (549)
..+|+.|++++|+++ .+|.. +++|+.|++++|++.+ .+|.. .. |+.|++++|
T Consensus 281 -p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~l---p~~Lq~LdLS~N 352 (788)
T PRK15387 281 -PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTL---PSGLQELSVSDN 352 (788)
T ss_pred -hhhcCEEECcCCccc-ccccc---ccccceeECCCCccccCCCCcccccccccccCcccccccc---ccccceEecCCC
Confidence 133444555555544 23321 2344455555544442 12221 12 667777777
Q ss_pred cCcccCchhhhhcCCCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCC
Q 039925 188 SFTGNLPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 188 ~l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
+++ .+|.. .++|+.|++++ .+..+.. ...+|+.|++++|.++. +|.. . ++|+.|++++|.++ .+|
T Consensus 353 ~Ls-~LP~l----p~~L~~L~Ls~N~L~~LP~--l~~~L~~LdLs~N~Lt~-LP~l---~--s~L~~LdLS~N~Ls-sIP 418 (788)
T PRK15387 353 QLA-SLPTL----PSELYKLWAYNNRLTSLPA--LPSGLKELIVSGNRLTS-LPVL---P--SELKELMVSGNRLT-SLP 418 (788)
T ss_pred ccC-CCCCC----CcccceehhhccccccCcc--cccccceEEecCCcccC-CCCc---c--cCCCEEEccCCcCC-CCC
Confidence 776 45532 23555566555 2232221 23468888888888874 4432 2 67888888888887 343
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCC
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPP 319 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 319 (549)
.. ..+|+.|++++|+++ .+|..+..+++|+.|+|++|+|++..|.
T Consensus 419 ----~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 419 ----ML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred ----cc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 22 246788889999888 7888888889999999999998876544
No 20
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.75 E-value=7.1e-19 Score=183.14 Aligned_cols=147 Identities=23% Similarity=0.326 Sum_probs=113.4
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce------------------------------------------eEEEeccccC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------------~g~~~~~~~~ 431 (549)
+.+....+.||+|+||+||+|+..+... +|+|..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~---- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE---- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----
Confidence 3445566779999999999998754331 799999
Q ss_pred CCceEEEEEeecCCCCcccccccCCC-------CCC-CCCCchhhhHHHHHHHHHHHHHhh-------------------
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNN-------KLK-PSSLSMIRKLSTTIDVASAIEYLR------------------- 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~-------~~~-~~~l~~~~~~~ia~~va~gl~yLH------------------- 484 (549)
.++.++|+|||..|+|.++|+.... +.. +.+++-.+.+.||.|||.||+||.
T Consensus 561 -~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 561 -GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred -CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 8999999999999999999985541 111 345888999999999999999995
Q ss_pred -----------------------------ccccC--------------------------------------Ccceeeec
Q 039925 485 -----------------------------VKMAL--------------------------------------PEKVMEIV 497 (549)
Q Consensus 485 -----------------------------~~~~~--------------------------------------~~~~~~~~ 497 (549)
.+++. .+.+..+-
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~ 719 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR 719 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence 01111 11222333
Q ss_pred cCcccchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhh
Q 039925 498 ESSLLLEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVA 545 (549)
Q Consensus 498 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~ 545 (549)
+..+.+.+++||.++++||..||++.|++||+|+||..+|+......+
T Consensus 720 ~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 720 AGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred cCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 344455568999999999999999999999999999999998865433
No 21
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.74 E-value=3.4e-18 Score=169.91 Aligned_cols=144 Identities=24% Similarity=0.332 Sum_probs=108.8
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-e------------------------------------eEEEeccccCCCc-e
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-T------------------------------------AGYSEGTDFKGID-F 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~------------------------------------~g~~~~~~~~~~~-~ 435 (549)
..++...+.+|+|+||+||+|.|++.. + +|+|.. +. .
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~-----~~~~ 114 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTS-----PPGS 114 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCc
Confidence 445556667999999999999998877 3 688877 44 6
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhhcc-----------------------------
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLRVK----------------------------- 486 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH~~----------------------------- 486 (549)
.++|||||++|+|+++++... ...++|..++++|.|||+||.|||..
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 899999999999999998731 35799999999999999999999900
Q ss_pred -------------------ccCCcceeee---cc-----------------Cccc-------------------c-hHHH
Q 039925 487 -------------------MALPEKVMEI---VE-----------------SSLL-------------------L-EIED 507 (549)
Q Consensus 487 -------------------~~~~~~~~~~---~~-----------------~~~~-------------------~-~~~~ 507 (549)
.+.|+.+.+. ++ ..++ + .+..
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~ 270 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKE 270 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCcc
Confidence 1111111100 00 0000 0 0145
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhhc
Q 039925 508 CLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVAC 546 (549)
Q Consensus 508 ~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~~ 546 (549)
|+..+..++.+||+.+|+.||+|.+|+..|+.+...+..
T Consensus 271 ~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 271 CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 888899999999999999999999999999998876543
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.71 E-value=3.7e-19 Score=150.40 Aligned_cols=162 Identities=25% Similarity=0.427 Sum_probs=92.6
Q ss_pred CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCE
Q 039925 79 RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFY 158 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 158 (549)
++.+++.|.||+|+++ .+|+.+..+.+| +.|++++|+|+ .+|..+..+++|+.|+++-|++. .+|..|+.++.|+.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nl-evln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNL-EVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhh-hhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 3445555555555555 555555555555 55555555555 44455555555555665555555 55666666666666
Q ss_pred EecccCccee-cccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccc
Q 039925 159 DNINRNEFSG-LIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQIS 236 (549)
Q Consensus 159 L~L~~n~l~~-~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~ 236 (549)
|||..|++.. .+|..|..++ |+.|++++|.|. .+|
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp------------------------------------------ 143 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILP------------------------------------------ 143 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCC------------------------------------------
Confidence 6666665542 3444455554 555555555544 333
Q ss_pred cccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccC
Q 039925 237 GTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGY 299 (549)
Q Consensus 237 ~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 299 (549)
..++++ ++|+.|.+.+|.+. .+|..++.++.|++|.+.+|+++ .+|+.+++
T Consensus 144 ----~dvg~l--t~lqil~lrdndll-----~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 144 ----PDVGKL--TNLQILSLRDNDLL-----SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred ----hhhhhh--cceeEEeeccCchh-----hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 344444 56666666666655 33566667777777777777776 55655543
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.71 E-value=2.9e-19 Score=151.05 Aligned_cols=140 Identities=25% Similarity=0.382 Sum_probs=119.1
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAI 132 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L 132 (549)
+.++.+++.|.||+|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++| +.|++.-|++. .+|..|+.++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~kl-r~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKL-RILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhh-hheecchhhhh-cCccccCCCchh
Confidence 456777888888999888 77778888889999999999888 788888888888 89999888887 788888999999
Q ss_pred CEEEeecceeee-eCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhh
Q 039925 133 QVMIFKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIG 198 (549)
Q Consensus 133 ~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~ 198 (549)
+.|||.+|++.. .+|..|..++.|+.|+|++|.+. .+|..++.++ |+.|.+..|.+- .+|.+++
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig 170 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIG 170 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHH
Confidence 999998888863 57888888888888899998887 7788888888 888888888887 7888877
No 24
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.69 E-value=2.9e-19 Score=169.73 Aligned_cols=260 Identities=16% Similarity=0.164 Sum_probs=195.4
Q ss_pred eecCc-cccCCCCCCEEEccCCcceecCCccccCCCCCCEeeccc-ccccccCC-cccccccCccceeeecccccccccc
Q 039925 47 KCLTP-HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLAN-NHFSGKIP-ANLSHCSNLLTKLFICETHLSGQLL 123 (549)
Q Consensus 47 g~lp~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p-~~l~~l~~L~~~L~Ls~n~l~~~~~ 123 (549)
..||+ +|+.+++|+.|||++|+|+.+-|+.|.++.+|..|-+-+ |+|+ .+| +.|.++..+ +.|.+.-|++.-...
T Consensus 80 ~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~sl-qrLllNan~i~Cir~ 157 (498)
T KOG4237|consen 80 SSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSL-QRLLLNANHINCIRQ 157 (498)
T ss_pred ccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHH-HHHhcChhhhcchhH
Confidence 46765 899999999999999999988899999999998887766 9999 555 568999999 999999999998888
Q ss_pred cccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcce------------ecccccccccc-cceeeCCCCcCc
Q 039925 124 DFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFS------------GLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 124 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~------------~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
+.|..+++|..|.+..|.+...--.+|..+..++++.+..|.+. ...|..+++.+ ..-..+.++++.
T Consensus 158 ~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~ 237 (498)
T KOG4237|consen 158 DALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRIN 237 (498)
T ss_pred HHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhc
Confidence 99999999999999999998443348999999999999988742 12223333333 333333333333
Q ss_pred ccCchhhhhcCCCCcEeeecc----cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCC
Q 039925 191 GNLPLEIGVTLPKGRNYYILL----LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 191 ~~~p~~~~~~l~~L~~L~l~~----~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
..-+..+...+.++..-..+. ...-...+...++|+.|+|++|+++..-+.+|.+. ..++.|.|..|++...-
T Consensus 238 q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~--a~l~eL~L~~N~l~~v~- 314 (498)
T KOG4237|consen 238 QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGA--AELQELYLTRNKLEFVS- 314 (498)
T ss_pred ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcch--hhhhhhhcCcchHHHHH-
Confidence 111222211111110000000 00001123445689999999999999999999999 99999999999997322
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccc
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
...|.++..|+.|+|.+|+|+-.-|..|..+..|..|+|-.|.+.
T Consensus 315 ---~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 315 ---SGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred ---HHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 456889999999999999999888999999999999999999875
No 25
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=2e-18 Score=172.45 Aligned_cols=245 Identities=19% Similarity=0.199 Sum_probs=157.7
Q ss_pred CccccCCCCCCEEEccCCccee----cCCccccCCCCCCEeecccccccc------cCCcccccccCccceeeecccccc
Q 039925 50 TPHVGNFGYLRFINLVDNNFRG----EIPEKVGRLFRLEYLLLANNHFSG------KIPANLSHCSNLLTKLFICETHLS 119 (549)
Q Consensus 50 p~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~------~~p~~l~~l~~L~~~L~Ls~n~l~ 119 (549)
+..|..+++|+.|+++++.++. .++..+...++|++|+++++.+.+ .++..+..+++| +.|++++|.+.
T Consensus 16 ~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L-~~L~l~~~~~~ 94 (319)
T cd00116 16 TELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGL-QELDLSDNALG 94 (319)
T ss_pred HHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCce-eEEEccCCCCC
Confidence 3445566778899999888753 255666777888899988887762 234456677788 88999888887
Q ss_pred cccccccCCCCC---CCEEEeecceeee----eCCccccCC-CCCCEEecccCcceec----ccccccccc-cceeeCCC
Q 039925 120 GQLLDFIGNPSA---IQVMIFKENSLEG----KFPNTLSNL-RSLFYDNINRNEFSGL----IPSFIFNIS-LKWNFLPE 186 (549)
Q Consensus 120 ~~~~~~~~~l~~---L~~L~L~~n~l~~----~~p~~~~~l-~~L~~L~L~~n~l~~~----~p~~~~~l~-L~~L~l~~ 186 (549)
...+..+..+.+ |++|++++|.++. .+...+..+ ++|++|++++|.+++. ++..+..+. |++|++++
T Consensus 95 ~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~ 174 (319)
T cd00116 95 PDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLAN 174 (319)
T ss_pred hhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcC
Confidence 655555555544 8999998888863 233445566 8888999988888742 334555666 88888888
Q ss_pred CcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccccc----ChhhhhccccCccEEEcCCCccc
Q 039925 187 NSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTI----TLGIKKLIFVNLYALTMVKNKLS 262 (549)
Q Consensus 187 n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~----~~~~~~l~~~~L~~L~L~~n~l~ 262 (549)
|.+++.....+...++. .++|+.|++++|.+++.. +..+..+ ++|++|++++|.++
T Consensus 175 n~l~~~~~~~l~~~l~~------------------~~~L~~L~L~~n~i~~~~~~~l~~~~~~~--~~L~~L~ls~n~l~ 234 (319)
T cd00116 175 NGIGDAGIRALAEGLKA------------------NCNLEVLDLNNNGLTDEGASALAETLASL--KSLEVLNLGDNNLT 234 (319)
T ss_pred CCCchHHHHHHHHHHHh------------------CCCCCEEeccCCccChHHHHHHHHHhccc--CCCCEEecCCCcCc
Confidence 88875322222211111 136777777777766432 2334445 67888888887776
Q ss_pred ccCCCcCcccc-CCccccCeeeccCccccc----cCCccccCCCCCCEEEccCCcccc
Q 039925 263 GPIPHHIASSL-GNLTLLTYLALDNNKLQG----NLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 263 ~~~p~~l~~~l-~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
+.....+...+ ...+.|++|++++|.++. .+...+..+++|+.+++++|.++.
T Consensus 235 ~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 235 DAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred hHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 42211111111 123678888888887752 234455566778888888887763
No 26
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=2.8e-18 Score=171.41 Aligned_cols=247 Identities=19% Similarity=0.184 Sum_probs=181.4
Q ss_pred ecCccccCCCCCCEEEccCCccee------cCCccccCCCCCCEeecccccccccCCcccccccC---ccceeeeccccc
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRG------EIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSN---LLTKLFICETHL 118 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~---L~~~L~Ls~n~l 118 (549)
.+++.+...+++++|+++++.+.+ .++..+..+++|+.|++++|.+.+..+..+..+.+ | ++|++++|++
T Consensus 42 ~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L-~~L~ls~~~~ 120 (319)
T cd00116 42 ALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSL-QELKLNNNGL 120 (319)
T ss_pred HHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcc-cEEEeeCCcc
Confidence 456677788899999999998762 34566788999999999999998666666666665 8 9999999998
Q ss_pred cc----ccccccCCC-CCCCEEEeecceeee----eCCccccCCCCCCEEecccCcceec----ccccccccc-cceeeC
Q 039925 119 SG----QLLDFIGNP-SAIQVMIFKENSLEG----KFPNTLSNLRSLFYDNINRNEFSGL----IPSFIFNIS-LKWNFL 184 (549)
Q Consensus 119 ~~----~~~~~~~~l-~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~-L~~L~l 184 (549)
.+ .+...+..+ ++|+.|++++|.+++ .++..+..+++|++|++++|.+.+. ++..+...+ |++|++
T Consensus 121 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L 200 (319)
T cd00116 121 GDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDL 200 (319)
T ss_pred chHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEec
Confidence 74 234456667 899999999999983 2445677788999999999998842 334455566 999999
Q ss_pred CCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhcc---ccCccEEEcCCCcc
Q 039925 185 PENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLI---FVNLYALTMVKNKL 261 (549)
Q Consensus 185 ~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~---~~~L~~L~L~~n~l 261 (549)
++|.+++.....+...++ ..++|++|++++|.+++.....+.... .+.|++|++++|.+
T Consensus 201 ~~n~i~~~~~~~l~~~~~------------------~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i 262 (319)
T cd00116 201 NNNGLTDEGASALAETLA------------------SLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDI 262 (319)
T ss_pred cCCccChHHHHHHHHHhc------------------ccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCC
Confidence 999987544443332221 224789999999988863333332210 16899999999998
Q ss_pred cccCCCcCccccCCccccCeeeccCcccccc----CCccccCC-CCCCEEEccCCcc
Q 039925 262 SGPIPHHIASSLGNLTLLTYLALDNNKLQGN----LPSSLGYY-QNLMELSVSRNKL 313 (549)
Q Consensus 262 ~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~Ls~N~l 313 (549)
++.....+...+..+++|+++++++|.++.. +...+... +.|+.+++.+|.+
T Consensus 263 ~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 263 TDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 7322112345566678999999999999954 44455555 7899999988864
No 27
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.68 E-value=2.7e-17 Score=177.61 Aligned_cols=147 Identities=23% Similarity=0.396 Sum_probs=112.6
Q ss_pred cccCcCCCccccCceecEEEEEeCC--Cc-----e-----------------------------------eEEEeccccC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE--KW-----T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~-----~-----------------------------------~g~~~~~~~~ 431 (549)
..+....+.||+|+||.||+|++.+ +. + .|+|..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~---- 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD---- 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC----
Confidence 4455677889999999999999743 32 1 688988
Q ss_pred CCceEEEEEeecCCCCcccccccCC-CCCCCCCCchhhhHHHHHHHHHHHHHhh--------------------------
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSN-NKLKPSSLSMIRKLSTTIDVASAIEYLR-------------------------- 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~-~~~~~~~l~~~~~~~ia~~va~gl~yLH-------------------------- 484 (549)
....++++|||++|+|..+|++.. .+.....++....+.+|.|||+||.||+
T Consensus 767 -~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 767 -SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred -CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcc
Confidence 788999999999999999999764 2223467888999999999999999998
Q ss_pred ----------------------cc---------------------------------ccCCc-----ceeeeccCcccch
Q 039925 485 ----------------------VK---------------------------------MALPE-----KVMEIVESSLLLE 504 (549)
Q Consensus 485 ----------------------~~---------------------------------~~~~~-----~~~~~~~~~~~~~ 504 (549)
++ ..+++ .+..++..+..+.
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~ 925 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDP 925 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCC
Confidence 11 11111 0111222333344
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhh
Q 039925 505 IEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVA 545 (549)
Q Consensus 505 ~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~ 545 (549)
+..|+.+++++|..||+.+|++||+|..|++.+..+.....
T Consensus 926 P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 926 PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 57899999999999999999999999999999988875543
No 28
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.67 E-value=1.9e-17 Score=169.65 Aligned_cols=135 Identities=23% Similarity=0.329 Sum_probs=107.0
Q ss_pred cCCCccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCCCceEE
Q 039925 398 SSSNMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 398 ~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..+++||.|.||.||+|+++--. . .|+-.. ..+.+
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-----s~PvM 706 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-----SKPVM 706 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-----CceeE
Confidence 47889999999999999985321 1 344444 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh---------------------------------
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR--------------------------------- 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH--------------------------------- 484 (549)
+|+|||+||+|+.+|+... +.|+|-+...+.+|||.||.||.
T Consensus 707 IiTEyMENGsLDsFLR~~D-----GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQND-----GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred EEhhhhhCCcHHHHHhhcC-----CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeec
Confidence 9999999999999999765 45999999999999999999996
Q ss_pred ------------------------------------------------------ccccCCcceeeeccCcccchHHHHHH
Q 039925 485 ------------------------------------------------------VKMALPEKVMEIVESSLLLEIEDCLV 510 (549)
Q Consensus 485 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (549)
+++...+.+..+.+....+.+.+||.
T Consensus 782 edd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~ 861 (996)
T KOG0196|consen 782 EDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPA 861 (996)
T ss_pred ccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcH
Confidence 11111222333333333456689999
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 511 SVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 511 ~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
.+++||+.||++|..+||+|.||+..|.++..
T Consensus 862 aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 862 ALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999853
No 29
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.67 E-value=6.7e-17 Score=161.74 Aligned_cols=141 Identities=20% Similarity=0.259 Sum_probs=109.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..+++.....||+|+||+||+|.|.+... .|+|.. + ..+
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~-----p-~~A 463 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN-----P-PLA 463 (678)
T ss_pred CHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC-----C-cee
Confidence 34456678889999999999999987653 688886 4 459
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh---------------------------------
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR--------------------------------- 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH--------------------------------- 484 (549)
+|+.||++-+||.+||..+ ..|+..+.+.||.|||+||.|||
T Consensus 464 IiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999999754 67999999999999999999999
Q ss_pred --------------------------------------------------cc----ccCCcceeeeccCc-----ccchH
Q 039925 485 --------------------------------------------------VK----MALPEKVMEIVESS-----LLLEI 505 (549)
Q Consensus 485 --------------------------------------------------~~----~~~~~~~~~~~~~~-----~~~~~ 505 (549)
.. ...++.+.=++.++ +....
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhh
Confidence 00 00011111111111 11123
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhh
Q 039925 506 EDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENV 544 (549)
Q Consensus 506 ~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~ 544 (549)
..|+.++.+|...||..++++||.|.+|+..|+.+....
T Consensus 619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 789999999999999999999999999999998887643
No 30
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.66 E-value=5.6e-17 Score=161.93 Aligned_cols=140 Identities=21% Similarity=0.296 Sum_probs=110.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..+....+.||-|-||.||.|+|+.... +|+|.. +...||
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~-----EpPFYI 340 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-----EPPFYI 340 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhcc-----CCCeEE
Confidence 4466778899999999999999976443 799998 889999
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh----------------------------------
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR---------------------------------- 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH---------------------------------- 484 (549)
|+|||.+|+|.+||+... +..++--..+.+|.||+.||+||.
T Consensus 341 iTEfM~yGNLLdYLRecn----r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 341 ITEFMCYGNLLDYLRECN----RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEecccCccHHHHHHHhc----hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 999999999999999765 345666677899999999999997
Q ss_pred ----------------------------------------------ccccCCc----ceeeeccCcc-cchHHHHHHHHH
Q 039925 485 ----------------------------------------------VKMALPE----KVMEIVESSL-LLEIEDCLVSVL 513 (549)
Q Consensus 485 ----------------------------------------------~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~ 513 (549)
....+++ ++.+++..+. ...++.|+.+++
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVY 496 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVY 496 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHH
Confidence 0111121 1223333333 234578999999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 514 TIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 514 ~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
++|..||+-+|.+||+|+||.+.++.|-.
T Consensus 497 eLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 497 ELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 99999999999999999999999998753
No 31
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.63 E-value=4.4e-16 Score=157.11 Aligned_cols=144 Identities=23% Similarity=0.327 Sum_probs=108.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC--C---c-e-------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE--K---W-T-------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~--~---~-~-------------------------------------~g~~~~~ 428 (549)
...++....+.||+|+||.||+|++.. + . | +|++..
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~- 232 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL- 232 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC-
Confidence 345566677999999999999999743 2 1 2 788888
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh------------------------
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR------------------------ 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH------------------------ 484 (549)
+.+.++|||+|+||+|.++|+..+ ..++..++++++.++|+||+|||
T Consensus 233 ----~~Pl~ivmEl~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 233 ----EEPLMLVMELCNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred ----CCccEEEEEecCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEe
Confidence 889999999999999999999765 36999999999999999999999
Q ss_pred ----------------------ccccCCc------------------ceeeeccC--------------------cc-cc
Q 039925 485 ----------------------VKMALPE------------------KVMEIVES--------------------SL-LL 503 (549)
Q Consensus 485 ----------------------~~~~~~~------------------~~~~~~~~--------------------~~-~~ 503 (549)
.++..|+ ..-+++.- .. .+
T Consensus 304 SDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 304 SDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP 383 (474)
T ss_pred CccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC
Confidence 0000011 01111110 00 11
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhh
Q 039925 504 EIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVA 545 (549)
Q Consensus 504 ~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~ 545 (549)
.+...+.++..++..||+.+|++||+|.+|++.++.+.+...
T Consensus 384 ~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 384 IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 124667778888889999999999999999999999876543
No 32
>PLN03150 hypothetical protein; Provisional
Probab=99.62 E-value=1.1e-15 Score=164.55 Aligned_cols=151 Identities=24% Similarity=0.417 Sum_probs=123.8
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCCCCCCC-----CCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCcc
Q 039925 2 TDHLALLAIKSLLHDRRGVTSSWSNSIDLC-----QWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEK 76 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c-----~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~ 76 (549)
+|.+||+++|+++.++. ..+|.. ++| .|.||.|..... . ....++.|+|++|.+++.+|..
T Consensus 372 ~~~~aL~~~k~~~~~~~--~~~W~g--~~C~p~~~~w~Gv~C~~~~~--~--------~~~~v~~L~L~~n~L~g~ip~~ 437 (623)
T PLN03150 372 EEVSALQTLKSSLGLPL--RFGWNG--DPCVPQQHPWSGADCQFDST--K--------GKWFIDGLGLDNQGLRGFIPND 437 (623)
T ss_pred hHHHHHHHHHHhcCCcc--cCCCCC--CCCCCcccccccceeeccCC--C--------CceEEEEEECCCCCccccCCHH
Confidence 57899999999996553 248963 345 799999953211 0 1123678999999999999999
Q ss_pred ccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCC-CC
Q 039925 77 VGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNL-RS 155 (549)
Q Consensus 77 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~ 155 (549)
+..+++|+.|+|++|.+.+.+|..+..+++| +.|+|++|++++.+|..++++++|++|+|++|++++.+|..+..+ .+
T Consensus 438 i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L-~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~ 516 (623)
T PLN03150 438 ISKLRHLQSINLSGNSIRGNIPPSLGSITSL-EVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLH 516 (623)
T ss_pred HhCCCCCCEEECCCCcccCcCChHHhCCCCC-CEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhcccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999888763 46
Q ss_pred CCEEecccCcce
Q 039925 156 LFYDNINRNEFS 167 (549)
Q Consensus 156 L~~L~L~~n~l~ 167 (549)
+..+++.+|...
T Consensus 517 ~~~l~~~~N~~l 528 (623)
T PLN03150 517 RASFNFTDNAGL 528 (623)
T ss_pred CceEEecCCccc
Confidence 677888877644
No 33
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.59 E-value=2.7e-15 Score=150.26 Aligned_cols=139 Identities=20% Similarity=0.270 Sum_probs=111.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC---ce--------------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK---WT--------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~---~~--------------------------------------~g~~~~~~~~ 431 (549)
+.+.....++||.|-||.||+|++.+- .. .|+|.+
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e---- 462 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE---- 462 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec----
Confidence 344556778899999999999998543 21 688885
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh---------------------------
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR--------------------------- 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH--------------------------- 484 (549)
.+.++|||.++-|.|+.||+..+ ..++......++.|++.||+|||
T Consensus 463 --~P~WivmEL~~~GELr~yLq~nk-----~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 463 --QPMWIVMELAPLGELREYLQQNK-----DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred --cceeEEEecccchhHHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeeccc
Confidence 68899999999999999999765 56888889999999999999999
Q ss_pred ----------------------------------------------------------ccccCCcceeeeccCcccchHH
Q 039925 485 ----------------------------------------------------------VKMALPEKVMEIVESSLLLEIE 506 (549)
Q Consensus 485 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 506 (549)
......+.+..+-.....+.++
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~ 615 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP 615 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC
Confidence 0111112333444444456678
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 507 DCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 507 ~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
.||..++.++.+||+.+|.+||.|.|+...|+.+..
T Consensus 616 nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 616 NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998875
No 34
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.55 E-value=1.4e-15 Score=147.06 Aligned_cols=76 Identities=32% Similarity=0.492 Sum_probs=63.1
Q ss_pred CCccccCceecEEEEEeCC--Cc----e-----------------------------------eEEEeccccCCCceEEE
Q 039925 400 SNMIGQGSFGSVYKGILGE--KW----T-----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~--~~----~-----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
.+.||.|+||.||+|.+.. .. + .|+|.. .+..++
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-----~~~~~l 78 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-----NEPLFL 78 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-----SSSEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-----cccccc
Confidence 4579999999999999981 11 1 688886 677999
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++|+... ...++|..+.+|+.|||+||+|||
T Consensus 79 v~e~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp EEE--TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccc----cccccccccccccccccccccccc
Confidence 999999999999999762 256899999999999999999999
No 35
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.54 E-value=8.2e-15 Score=142.33 Aligned_cols=81 Identities=22% Similarity=0.378 Sum_probs=66.6
Q ss_pred cccCcCCCccccCceecEEEEEeCC--Cc---e-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE--KW---T-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~---~-----------------------------------~g~~~~~~~~~~ 433 (549)
.++|...+.||+|+||.||+|.+.. .. + .|++.. .
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-----G 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-----C
Confidence 4568888999999999999998641 11 1 455555 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ..++|..++.++.|++.|++|||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH 124 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLS 124 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999997643 46899999999999999999999
No 36
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.52 E-value=2.3e-14 Score=142.27 Aligned_cols=142 Identities=18% Similarity=0.242 Sum_probs=110.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------eEEEeccccCCCceEEEEEeecC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------AGYSEGTDFKGIDFKAVVFDYMQ 444 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------~g~~~~~~~~~~~~~~lv~ey~~ 444 (549)
+..+..+..+.||.|+-|.||.|++++..| .|+|.. ...++||||||+
T Consensus 121 iPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtq-----sPcyCIiMEfCa 195 (904)
T KOG4721|consen 121 IPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQ-----SPCYCIIMEFCA 195 (904)
T ss_pred CCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecC-----CceeEEeeeccc
Confidence 455667788899999999999999988776 799998 788999999999
Q ss_pred CCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh----------------------------------------
Q 039925 445 NRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR---------------------------------------- 484 (549)
Q Consensus 445 ~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH---------------------------------------- 484 (549)
.|-|+++|+... +++....+.+..+||.||.|||
T Consensus 196 ~GqL~~VLka~~------~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkM 269 (904)
T KOG4721|consen 196 QGQLYEVLKAGR------PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKM 269 (904)
T ss_pred cccHHHHHhccC------ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhh
Confidence 999999999754 6788888999999999999999
Q ss_pred -----ccccCCcc------------------eeeeccCcc--------------------cchHHHHHHHHHHHHHHhcc
Q 039925 485 -----VKMALPEK------------------VMEIVESSL--------------------LLEIEDCLVSVLTIGILCSV 521 (549)
Q Consensus 485 -----~~~~~~~~------------------~~~~~~~~~--------------------~~~~~~~~~~l~~l~~~C~~ 521 (549)
+.++.|+. ..+++...+ .+.+..||..+.-|+..||+
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~ 349 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN 349 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence 11111110 011111111 12347899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhh
Q 039925 522 ESPSERMEKPYIVSKLSHARENV 544 (549)
Q Consensus 522 ~~P~~RP~~~~v~~~L~~~~~~~ 544 (549)
..|..||+|.+|+..|+-...++
T Consensus 350 sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 350 SKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred cCCCCCccHHHHHHHHhhcCHHH
Confidence 99999999999999887665543
No 37
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.51 E-value=5.9e-15 Score=152.23 Aligned_cols=135 Identities=20% Similarity=0.304 Sum_probs=103.6
Q ss_pred CcCCCccccCceecEEEEEe-CCCce----------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGIL-GEKWT----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~-~~~~~----------------------------------------~g~~~~~~~~~~~~ 435 (549)
+....+||.|+||.||||.| +++.. +|+|.. +.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~------s~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML------ST 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc------ch
Confidence 45677899999999999998 44432 577775 45
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-------------------------------
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR------------------------------- 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH------------------------------- 484 (549)
..||++|||.|+|.++.+.++ ..+.-+..+.++.|||+||.|||
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr-----~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHR-----DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhh
Confidence 889999999999999999765 56778889999999999999999
Q ss_pred ---------------------------------------------------c---cccCCcceeeecc-CcccchHHHHH
Q 039925 485 ---------------------------------------------------V---KMALPEKVMEIVE-SSLLLEIEDCL 509 (549)
Q Consensus 485 ---------------------------------------------------~---~~~~~~~~~~~~~-~~~~~~~~~~~ 509 (549)
. .....+.+.+.+. +.....++-|.
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCt 926 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICT 926 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCcc
Confidence 0 0000011222221 11223457888
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 510 VSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 510 ~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
..++-++.+||..|+..||+|++....+.++.+
T Consensus 927 iDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 927 IDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 899999999999999999999999999988764
No 38
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.48 E-value=5.2e-14 Score=136.19 Aligned_cols=84 Identities=19% Similarity=0.315 Sum_probs=70.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
++..+|...+.||+|+||.||+|...++.. ++++.. .+..
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 77 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-----GEPV 77 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-----CCCe
Confidence 356688889999999999999999866432 355555 6778
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ...+++.++.+++.+++.|+.|||
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH 121 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPE----GQVLPVASLIDMACQVAEGMAYLE 121 (261)
T ss_pred EEEEeecccCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 346899999999999999999999
No 39
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.47 E-value=7e-14 Score=135.74 Aligned_cols=81 Identities=22% Similarity=0.371 Sum_probs=66.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCC---c--e-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK---W--T-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~---~--~-----------------------------------~g~~~~~~~~~~ 433 (549)
.++|...+.||+|+||.||+|.+... . + .+.+.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-----S 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-----C
Confidence 46788999999999999999998532 1 1 333443 5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ..++|..+++++.|++.|++|||
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh 123 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLS 123 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999997643 36899999999999999999999
No 40
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.47 E-value=4.8e-14 Score=134.20 Aligned_cols=80 Identities=19% Similarity=0.204 Sum_probs=67.3
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCc-e
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGID-F 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~-~ 435 (549)
.+++.....||+|..|+|||+..+.... +|++.. +. .
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~ 152 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEE 152 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCce
Confidence 3466777889999999999999864433 566665 45 5
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||.+|||+++++..+ ++++...-+||.+|.+||.|||
T Consensus 153 isI~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh 195 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLH 195 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998653 6889999999999999999999
No 41
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.46 E-value=8.2e-14 Score=134.42 Aligned_cols=80 Identities=28% Similarity=0.344 Sum_probs=67.2
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++|...+.||+|+||.||+|.+.++.. ++++.. .+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-----QKPLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEcc-----CCCEEEEE
Confidence 567778899999999999998865422 455555 67789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... ..++|..+..++.|++.||+|||
T Consensus 79 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 117 (256)
T cd05114 79 EFMENGCLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLE 117 (256)
T ss_pred EcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 35889999999999999999999
No 42
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.45 E-value=1.4e-13 Score=138.72 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 508 CLVSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 508 ~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
++.++.+++.+||+.+|++||++.||++.|+.+..
T Consensus 302 ~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 302 ATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 34568899999999999999999999999998764
No 43
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.43 E-value=2.2e-13 Score=132.38 Aligned_cols=82 Identities=22% Similarity=0.458 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cc----e-----------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KW----T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~----~-----------------------------------~g~~~~~~~~~ 432 (549)
.+++|+..+.||+|+||.||+|+... +. + .+++..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 77 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK----- 77 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-----
Confidence 45688899999999999999998742 21 1 344444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... ..++|.++..++.|++.|++|||
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH 124 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLS 124 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999997543 46899999999999999999999
No 44
>PHA02988 hypothetical protein; Provisional
Probab=99.43 E-value=3.5e-13 Score=132.08 Aligned_cols=77 Identities=22% Similarity=0.332 Sum_probs=61.8
Q ss_pred CccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 401 NMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
..||+|++|.||+|.+.+..+ +|++... .......++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEEEeC
Confidence 679999999999999866544 3444320 01134678999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+|.++++... .++|..+++++.++|.||.|||
T Consensus 105 ~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH 139 (283)
T PHA02988 105 TRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLY 139 (283)
T ss_pred CCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHH
Confidence 9999999998643 6889999999999999999999
No 45
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.42 E-value=9.9e-14 Score=138.38 Aligned_cols=139 Identities=17% Similarity=0.220 Sum_probs=104.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
+.......+.||+|-||.|..+...++.. +|+|.. .+++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----DePi 610 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----DDPL 610 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----CCch
Confidence 44445677889999999999998776322 799998 8899
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh--------------------------------
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR-------------------------------- 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH-------------------------------- 484 (549)
++|+|||++|+|..++..+. ...+.-...++||.|||.||+||.
T Consensus 611 cmI~EYmEnGDLnqFl~ahe----apt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHE----LPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHHHHHhcCcHHHHHHhcc----CcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccc
Confidence 99999999999999999875 222455567889999999999997
Q ss_pred --------------------------------------------------ccccCC--------cceeeeccC----ccc
Q 039925 485 --------------------------------------------------VKMALP--------EKVMEIVES----SLL 502 (549)
Q Consensus 485 --------------------------------------------------~~~~~~--------~~~~~~~~~----~~~ 502 (549)
....+. ++..++.+. .++
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec
Confidence 011111 011122211 112
Q ss_pred chHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q 039925 503 LEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHA 540 (549)
Q Consensus 503 ~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~ 540 (549)
..+..|+.++++++++||..+-++||+|.+++.-|++.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 33478999999999999999999999999999888754
No 46
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.42 E-value=2.4e-13 Score=131.51 Aligned_cols=83 Identities=16% Similarity=0.292 Sum_probs=68.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|...++.. .+++.. .+..++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 78 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK-----EEPIYI 78 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCcEE
Confidence 45678888999999999999998765432 334444 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... ...+++.+++.++.|+++|++|||
T Consensus 79 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~LH 120 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDE----GGKVLLPKLIDFSAQIAEGMAYIE 120 (261)
T ss_pred EEecCCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 346889999999999999999999
No 47
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.41 E-value=9.5e-14 Score=141.08 Aligned_cols=133 Identities=20% Similarity=0.271 Sum_probs=99.1
Q ss_pred ccCcCCCccccCceecEEEEEeC--CCce--------------------------------------eEEEeccccCCCc
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG--EKWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
+.....+.||+|.||+|++|.|. +|+. +|+-. ..
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl------~q 183 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL------DQ 183 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec------cc
Confidence 33445577999999999999995 3433 33333 24
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh------------------------------
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR------------------------------ 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH------------------------------ 484 (549)
...+|+|.++.|+|.+.|++.. ...|-......+|.|||.||.||.
T Consensus 184 p~mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLm 259 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLM 259 (1039)
T ss_pred hhhHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccce
Confidence 5679999999999999999732 456888889999999999999997
Q ss_pred ----------------------------------------------------ccccCCc----ceeeecc-CcccchHHH
Q 039925 485 ----------------------------------------------------VKMALPE----KVMEIVE-SSLLLEIED 507 (549)
Q Consensus 485 ----------------------------------------------------~~~~~~~----~~~~~~~-~~~~~~~~~ 507 (549)
.++.+.+ .+.+.+| ....+.+..
T Consensus 260 RaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~ 339 (1039)
T KOG0199|consen 260 RALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKY 339 (1039)
T ss_pred eccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCC
Confidence 0111111 2333333 233455689
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 039925 508 CLVSVLTIGILCSVESPSERMEKPYIVSKL 537 (549)
Q Consensus 508 ~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L 537 (549)
|++.++++|..||+.+|++||+|..|++.+
T Consensus 340 csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 999999999999999999999999998544
No 48
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.41 E-value=3.2e-13 Score=133.92 Aligned_cols=86 Identities=20% Similarity=0.276 Sum_probs=65.8
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc------------------e----------------------------------
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW------------------T---------------------------------- 421 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~------------------~---------------------------------- 421 (549)
.++|...+.||+|+||.||+|.+.++. +
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 457788889999999999999763211 1
Q ss_pred -eEEEeccccCCCceEEEEEeecCCCCcccccccCCC-------------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 -AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNN-------------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 -~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~-------------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|++.. .+..++||||+++|+|.+++..... ......++|....+++.|+|+||+|||
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 155 (304)
T cd05096 84 LLGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS 155 (304)
T ss_pred EEEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 455554 5678999999999999999864320 001235788899999999999999999
No 49
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.41 E-value=3.5e-13 Score=130.64 Aligned_cols=82 Identities=21% Similarity=0.383 Sum_probs=67.0
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc--e---------------------------------eEEEeccccCCCceEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW--T---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..+|...+.||+|+||.||+|.+.+.. + .++|.. .+..++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPFYI 79 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcC-----CCCcEE
Confidence 346788889999999999999975322 1 455555 667899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ...++|..++.++.|+++|++|||
T Consensus 80 v~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH 121 (263)
T cd05052 80 ITEFMTYGNLLDYLRECN----RQEVNAVVLLYMATQISSAMEYLE 121 (263)
T ss_pred EEEeCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 346899999999999999999999
No 50
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.41 E-value=2.2e-13 Score=139.09 Aligned_cols=32 Identities=19% Similarity=0.141 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q 039925 509 LVSVLTIGILCSVESPSERMEKPYIVSKLSHA 540 (549)
Q Consensus 509 ~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~ 540 (549)
+.++.+++.+||+.+|++||+|.||++.|++.
T Consensus 343 ~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 343 PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 45688999999999999999999999999853
No 51
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.40 E-value=2.8e-13 Score=132.15 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=45.4
Q ss_pred eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 ~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+|.. ....++||||+++|+|..+++... ..+++..++.++.|+|+||+|||
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 134 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLE 134 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 466666 678899999999999999987543 35788889999999999999999
No 52
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.40 E-value=4.9e-13 Score=130.84 Aligned_cols=80 Identities=28% Similarity=0.287 Sum_probs=64.7
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cc-----e-----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KW-----T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-----~-----------------------------------~g~~~~~~~~~ 432 (549)
.++|...+.||+|+||.||+|.+.. +. + +|++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------ 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------ 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------
Confidence 4578888999999999999999732 21 1 34332
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++|+||+++|+|.++++... ..++|.....++.|+++||+|||
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 126 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLE 126 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999998643 46899999999999999999999
No 53
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=5.6e-13 Score=129.29 Aligned_cols=83 Identities=23% Similarity=0.373 Sum_probs=65.4
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce------------------------------eEEEecc-ccCC-CceEEEEEee
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------AGYSEGT-DFKG-IDFKAVVFDY 442 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------~g~~~~~-~~~~-~~~~~lv~ey 442 (549)
......+.||+|.||.||+|.|++..| +|+..+. ...+ -...+||++|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdY 290 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDY 290 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeec
Confidence 345667889999999999999999887 2221110 0000 1357999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
-++|||+|||... +++-...+++|+.+|.||+|||
T Consensus 291 He~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH 325 (513)
T KOG2052|consen 291 HEHGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLH 325 (513)
T ss_pred ccCCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHH
Confidence 9999999999864 5888999999999999999999
No 54
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.39 E-value=1.1e-13 Score=125.64 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=65.9
Q ss_pred CCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEEEEEee
Q 039925 399 SSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 399 ~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
....|.+...|..|+|+|++..+ +|+|.. +....+|..|
T Consensus 194 l~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-----ppnlv~isq~ 268 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-----PPNLVIISQY 268 (448)
T ss_pred hhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-----CCCceEeeee
Confidence 33457778899999999988765 577887 7888999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||.|+|+.+||... ....+-.+.+++|+++|+||+|||
T Consensus 269 mp~gslynvlhe~t----~vvvd~sqav~faldiargmaflh 306 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQT----SVVVDHSQAVRFALDIARGMAFLH 306 (448)
T ss_pred ccchHHHHHHhcCc----cEEEecchHHHHHHHHHhhHHHHh
Confidence 99999999999764 456778889999999999999999
No 55
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.39 E-value=4.6e-13 Score=137.34 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 508 CLVSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 508 ~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
++.++.+++.+||+.+|++||+|.+|++.|+++.+
T Consensus 365 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 365 ATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred CCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 45678899999999999999999999999988754
No 56
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.39 E-value=1e-12 Score=128.93 Aligned_cols=83 Identities=22% Similarity=0.298 Sum_probs=64.6
Q ss_pred cccCcCCCccccCceecEEEEEeCC-----Cce-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-----KWT-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~-----------------------------------~g~~~~~~~~~~ 433 (549)
..+|...+.||+|+||.||+|.+.. +.. .+++.. .+.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCC
Confidence 3467788899999999999998531 111 333332 114
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.+++.... ..++|..+..++.|+++|++|||
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH 125 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLG 125 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999997543 35899999999999999999999
No 57
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.38 E-value=4.4e-13 Score=133.69 Aligned_cols=80 Identities=23% Similarity=0.379 Sum_probs=65.3
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cc-----e-----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KW-----T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-----~-----------------------------------~g~~~~~~~~~ 432 (549)
..+|...+.||+|+||.||+|++.. +. + +|+|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~----- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-----
Confidence 3578999999999999999998632 21 1 455553
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....+|+||+++|+|.++++... ..+++...++++.|||+||+|||
T Consensus 81 -~~~~~v~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH 126 (316)
T cd05108 81 -STVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLE 126 (316)
T ss_pred -CCceeeeecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999998643 45889999999999999999999
No 58
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.38 E-value=7.4e-13 Score=129.75 Aligned_cols=86 Identities=26% Similarity=0.417 Sum_probs=66.6
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-------e-----------------------------------eEEEeccccC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-------T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~-----------------------------------~g~~~~~~~~ 431 (549)
.++|...+.||+|+||.||+|...+.. + .+++..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK---- 79 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC----
Confidence 457888899999999999999864322 1 344444
Q ss_pred CCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....+++|||+++|+|.+++...... .....+++...+.++.|++.|++|||
T Consensus 80 -~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH 141 (283)
T cd05048 80 -EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999754310 01145788889999999999999999
No 59
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.37 E-value=1.2e-12 Score=129.44 Aligned_cols=85 Identities=24% Similarity=0.410 Sum_probs=65.8
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc----e------------------------------------eEEEeccccCCCc
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW----T------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~----~------------------------------------~g~~~~~~~~~~~ 434 (549)
++|...++||+|+||.||+|...+.. + .+++.. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-----RG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-----CC
Confidence 67888899999999999999875321 1 233333 55
Q ss_pred eEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++|+||+++|+|.++++.... ......+++.....++.|++.|++|||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH 136 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS 136 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999975321 011235889999999999999999999
No 60
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.37 E-value=8.4e-13 Score=129.01 Aligned_cols=88 Identities=25% Similarity=0.362 Sum_probs=70.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-----Cce-------------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-----KWT-------------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~-------------------------------------~g~~~~~~ 429 (549)
.++++|...+.||+|+||.||+|.+.+ ... .+++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-- 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE-- 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--
Confidence 567889999999999999999999864 111 344444
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCC-CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNN-KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~-~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++.... ......++|..+++++.||+.|++|||
T Consensus 81 ---~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH 133 (277)
T cd05036 81 ---RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133 (277)
T ss_pred ---CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5677999999999999999976541 112246899999999999999999999
No 61
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.37 E-value=8.1e-13 Score=135.50 Aligned_cols=33 Identities=15% Similarity=0.022 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q 039925 509 LVSVLTIGILCSVESPSERMEKPYIVSKLSHAR 541 (549)
Q Consensus 509 ~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~ 541 (549)
+.++.+++.+||+.+|++||+|.||++.|+++.
T Consensus 368 ~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 368 SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 457889999999999999999999999998763
No 62
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.37 E-value=6.7e-13 Score=126.55 Aligned_cols=147 Identities=20% Similarity=0.232 Sum_probs=108.0
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce------------------------------------------eEEEeccccC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------------~g~~~~~~~~ 431 (549)
...+....++-+|.||.||+|.|++.+. .|+|.+.
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~--- 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED--- 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec---
Confidence 3447777788999999999999976543 4555542
Q ss_pred CCceEEEEEeecCCCCcccccccCC--CCCCCCCCchhhhHHHHHHHHHHHHHhh-------------------------
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSN--NKLKPSSLSMIRKLSTTIDVASAIEYLR------------------------- 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~--~~~~~~~l~~~~~~~ia~~va~gl~yLH------------------------- 484 (549)
....+++|.|+.-|+|..+|+.-+ .+...+.++-.+.+.+|.|+|.||+|||
T Consensus 360 -~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 360 -YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred -cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 567789999999999999998222 2335677888889999999999999999
Q ss_pred --------------------------------------------------ccc-cCC---------cceeee-ccCcccc
Q 039925 485 --------------------------------------------------VKM-ALP---------EKVMEI-VESSLLL 503 (549)
Q Consensus 485 --------------------------------------------------~~~-~~~---------~~~~~~-~~~~~~~ 503 (549)
++. ... ..+... .|.....
T Consensus 439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRla 518 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLA 518 (563)
T ss_pred cchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceec
Confidence 000 000 001111 1111223
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhh
Q 039925 504 EIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENV 544 (549)
Q Consensus 504 ~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~ 544 (549)
.+..||.+++.+|.-||+..|++||+|.|++.-|.++...+
T Consensus 519 QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 519 QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999998876543
No 63
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.37 E-value=1.6e-14 Score=143.81 Aligned_cols=212 Identities=22% Similarity=0.306 Sum_probs=155.2
Q ss_pred EEEccCCcceecCCc--cccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 61 FINLVDNNFRGEIPE--KVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 61 ~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
.|.|++-++. ..|- .=-.+.--...||+.|++. ++|..+..+..| +.+.|..|.+. .+|..+.++..|.+|||+
T Consensus 54 ~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~L-e~liLy~n~~r-~ip~~i~~L~~lt~l~ls 129 (722)
T KOG0532|consen 54 RLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSL-ESLILYHNCIR-TIPEAICNLEALTFLDLS 129 (722)
T ss_pred ccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHH-HHHHHHhccce-ecchhhhhhhHHHHhhhc
Confidence 3555555555 3332 1133455567888889988 888888888888 88888888886 677888888888888888
Q ss_pred cceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccc
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLY 217 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~ 217 (549)
.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+. |..|+.+.|.+. .+|..++ .+
T Consensus 130 ~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~-~l---------------- 188 (722)
T KOG0532|consen 130 SNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG-YL---------------- 188 (722)
T ss_pred cchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh-hH----------------
Confidence 88888 7787777764 788888888887 6777777666 888888888887 6666655 22
Q ss_pred cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccc
Q 039925 218 WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSL 297 (549)
Q Consensus 218 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l 297 (549)
.+|+.|.+..|++. .+|..+..+ .|..||++.|+++ .||-.|.+|..|++|-|.+|.+. ..|..+
T Consensus 189 -----~slr~l~vrRn~l~-~lp~El~~L---pLi~lDfScNkis-----~iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 189 -----TSLRDLNVRRNHLE-DLPEELCSL---PLIRLDFSCNKIS-----YLPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred -----HHHHHHHHhhhhhh-hCCHHHhCC---ceeeeecccCcee-----ecchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 25677777888877 456566644 6888899999888 44788888999999999999888 555544
Q ss_pred c---CCCCCCEEEccCCc
Q 039925 298 G---YYQNLMELSVSRNK 312 (549)
Q Consensus 298 ~---~l~~L~~L~Ls~N~ 312 (549)
+ ...-.++|+..-++
T Consensus 254 C~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 254 CEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred Hhccceeeeeeecchhcc
Confidence 3 33445667776664
No 64
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.37 E-value=6.5e-13 Score=129.77 Aligned_cols=88 Identities=22% Similarity=0.351 Sum_probs=67.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-------e-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-------T-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~-----------------------------------~g~~~~~~ 429 (549)
.++++|...+.||+|+||.||+|.+.+.. + .+++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-- 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-- 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--
Confidence 46788999999999999999998764210 1 344444
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCC----CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKL----KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~----~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++...... ....++|..++.++.|+++|++|||
T Consensus 81 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 136 (277)
T cd05062 81 ---GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN 136 (277)
T ss_pred ---CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999987533100 1234688889999999999999999
No 65
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.37 E-value=6.4e-13 Score=128.23 Aligned_cols=80 Identities=21% Similarity=0.327 Sum_probs=66.7
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-e---------------------------------eEEEeccccCCCceEEEEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-T---------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++|...+.||+|+||.||+|.+.++. + +++|.. .+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-----QRPIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-----CCCcEEEE
Confidence 46777788999999999999876543 2 455555 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... ..++|..+++++.|++.|++|||
T Consensus 79 e~~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 117 (256)
T cd05113 79 EYMSNGCLLNYLREHG-----KRFQPSQLLEMCKDVCEGMAYLE 117 (256)
T ss_pred EcCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 36899999999999999999999
No 66
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.36 E-value=1.1e-12 Score=129.16 Aligned_cols=86 Identities=21% Similarity=0.327 Sum_probs=66.7
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-------e----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-------T----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~----------------------------------~g~~~~~~~~~ 432 (549)
..+|...+.||+|+||.||+|...+.. + .+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 78 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD----- 78 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-----
Confidence 346777889999999999999753211 1 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++..... ......++|..++.++.|++.|++|||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 140 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 140 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999975431 011245899999999999999999999
No 67
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.36 E-value=1.1e-12 Score=127.52 Aligned_cols=81 Identities=26% Similarity=0.429 Sum_probs=65.9
Q ss_pred cccCcCCCccccCceecEEEEEeC--CCc---e-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG--EKW---T-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~---~-----------------------------------~g~~~~~~~~~~ 433 (549)
..+|...+.||+|+||.||+|... ++. + .+++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----S 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 356788899999999999999863 111 1 344444 5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ..+++.+.+.++.|++.|++|||
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH 123 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLS 123 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999997543 45899999999999999999999
No 68
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.36 E-value=3.9e-14 Score=141.01 Aligned_cols=199 Identities=26% Similarity=0.399 Sum_probs=164.9
Q ss_pred cCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCC
Q 039925 54 GNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQ 133 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~ 133 (549)
..+..-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..+.++..| .+|||+.|++. .+|..+..|+ |+
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~l-t~l~ls~NqlS-~lp~~lC~lp-Lk 146 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEAL-TFLDLSSNQLS-HLPDGLCDLP-LK 146 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHH-HHhhhccchhh-cCChhhhcCc-ce
Confidence 45666778999999999 89999999999999999999999 899999999999 99999999998 6677666665 89
Q ss_pred EEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc
Q 039925 134 VMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL 212 (549)
Q Consensus 134 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~ 212 (549)
.|-+++|+++ .+|+.++.+..|..|+.+.|++. .+|..+.++. |+.|.+..|++. .+|.++. .|
T Consensus 147 vli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~L----------- 211 (722)
T KOG0532|consen 147 VLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SL----------- 211 (722)
T ss_pred eEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CC-----------
Confidence 9999999998 89999999999999999999998 6778888888 999999999988 7888776 33
Q ss_pred ccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCcc
Q 039925 213 AQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNK 288 (549)
Q Consensus 213 ~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~ 288 (549)
.|..||++.|++. .+|..|.+| ..|++|-|.+|.+.. -|..|- .-+...-.++|+..-++
T Consensus 212 -----------pLi~lDfScNkis-~iPv~fr~m--~~Lq~l~LenNPLqS-PPAqIC-~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 212 -----------PLIRLDFSCNKIS-YLPVDFRKM--RHLQVLQLENNPLQS-PPAQIC-EKGKVHIFKYLSTQACQ 271 (722)
T ss_pred -----------ceeeeecccCcee-ecchhhhhh--hhheeeeeccCCCCC-ChHHHH-hccceeeeeeecchhcc
Confidence 4889999999998 789999999 999999999999873 221110 11334445677776663
No 69
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.36 E-value=1.2e-12 Score=126.31 Aligned_cols=83 Identities=29% Similarity=0.317 Sum_probs=67.0
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce--------------------------------eEEEeccccCCCceEEEEEe
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
..+|...+.||+|+||.||+|...+..+ .|++.. .....++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~lv~e 80 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYIVTE 80 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceEEEEE
Confidence 4578888999999999999998765544 333322 1456899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.++++... ...++|..++.++.+++.|++|||
T Consensus 81 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH 119 (256)
T cd05082 81 YMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLE 119 (256)
T ss_pred CCCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999998643 245889999999999999999999
No 70
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.36 E-value=1.5e-12 Score=129.02 Aligned_cols=89 Identities=26% Similarity=0.371 Sum_probs=69.1
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cc-e--------------------------------------eEEEecccc
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KW-T--------------------------------------AGYSEGTDF 430 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-~--------------------------------------~g~~~~~~~ 430 (549)
+...++|...+.||+|+||.||+|.+.+ +. + .+++..
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~--- 79 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--- 79 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC---
Confidence 3456788999999999999999998743 21 1 344444
Q ss_pred CCCceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++.... ......+++.+++.++.|+++|++|||
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 141 (303)
T cd05088 80 --RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 141 (303)
T ss_pred --CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999975431 011246889999999999999999999
No 71
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.36 E-value=1e-12 Score=126.75 Aligned_cols=80 Identities=28% Similarity=0.342 Sum_probs=66.7
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
.+|...+.||+|+||.||+|.+.++.. ++++.. .+..++||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-----QRPIFIVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-----CCceEEEE
Confidence 468888999999999999998765422 344444 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... ..++|.....++.|++.|++|||
T Consensus 79 e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 117 (256)
T cd05059 79 EYMANGCLLNYLRERK-----GKLGTEWLLDMCSDVCEAMEYLE 117 (256)
T ss_pred ecCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997643 36899999999999999999999
No 72
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.36 E-value=1.5e-12 Score=126.74 Aligned_cols=88 Identities=25% Similarity=0.391 Sum_probs=63.5
Q ss_pred CcCCCccccCceecEEEEEeCCCc-----e------------------------------------eEEEecccc-CCCc
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKW-----T------------------------------------AGYSEGTDF-KGID 434 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~-----~------------------------------------~g~~~~~~~-~~~~ 434 (549)
|...+.||+|+||.||+|.+.... + +|++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456788999999999999874311 1 234433110 1123
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++|+||+++|+|.+++...........+++.....++.|++.|++|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH 130 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS 130 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999865432122346899999999999999999999
No 73
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.35 E-value=1.7e-12 Score=126.37 Aligned_cols=88 Identities=26% Similarity=0.362 Sum_probs=62.8
Q ss_pred CcCCCccccCceecEEEEEeCCCc----e------------------------------------eEEEeccc-cCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKW----T------------------------------------AGYSEGTD-FKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~----~------------------------------------~g~~~~~~-~~~~~~ 435 (549)
|+.++.||+|+||.||+|.+.+.. + +|+|.... ......
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 356788999999999999875432 1 34443211 011235
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|||||++|+|.+++...........++|.....++.|++.|++|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 129 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS 129 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999998753321112346899999999999999999999
No 74
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.35 E-value=2.1e-12 Score=127.15 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=63.9
Q ss_pred cCcCCCccccCceecEEEEEeCCC-------ce-----------------------------------eEEEeccccCCC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEK-------WT-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~-------~~-----------------------------------~g~~~~~~~~~~ 433 (549)
+|...+.||+|+||.||+|+.... .+ .+.|.. .
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ-----D 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----C
Confidence 466778999999999999985321 01 344544 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCC------------------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNK------------------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~------------------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++|+||+++|+|.+++...... .....++|...+.++.|++.|++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 144 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA 144 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999998643200 11245889999999999999999999
No 75
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.35 E-value=2.4e-12 Score=124.91 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=64.9
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+... +.. .+++.. .+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----DNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----CCe
Confidence 578889999999999999998642 221 334444 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|+||+++|+|.+++..... ....+++.....++.|+++||+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMH 123 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999998864320 1235788888999999999999999
No 76
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.34 E-value=1.7e-12 Score=128.83 Aligned_cols=87 Identities=20% Similarity=0.238 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC---------ce------------------------------------eEEEec
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK---------WT------------------------------------AGYSEG 427 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~---------~~------------------------------------~g~~~~ 427 (549)
..++|...+.||+|+||.||++...+. .+ .++|..
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 356788899999999999999875320 01 344544
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++..... .....++|..+++++.|++.|++|||
T Consensus 96 -----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH 157 (307)
T cd05098 96 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA 157 (307)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999764310 01235899999999999999999999
No 77
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.34 E-value=1.5e-12 Score=127.96 Aligned_cols=88 Identities=25% Similarity=0.363 Sum_probs=67.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------C-ce-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------K-WT-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~-~~-----------------------------------~g~~~~~~ 429 (549)
...++|...+.||+|+||.||+|...+ + .+ .++|..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~-- 79 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV-- 79 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC--
Confidence 356789999999999999999998642 1 11 345554
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCC----------------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNN----------------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~----------------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++..... ......+++..++.++.|++.|++|||
T Consensus 80 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH 147 (288)
T cd05050 80 ---GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS 147 (288)
T ss_pred ---CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999974320 011235788889999999999999999
No 78
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.34 E-value=1.7e-12 Score=127.54 Aligned_cols=86 Identities=22% Similarity=0.354 Sum_probs=67.2
Q ss_pred cccCcCCCccccCceecEEEEEeCC------Cc-e----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE------KW-T----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~----------------------------------~g~~~~~~~~~ 432 (549)
..+|...+.||+|+||.||++.... +. + .+++..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE----- 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 4578889999999999999997421 11 0 455655
Q ss_pred CceEEEEEeecCCCCcccccccCCC-------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNN-------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~-------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++.... ......++|..++.++.|++.||+|||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH 137 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA 137 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999875430 011235899999999999999999999
No 79
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.34 E-value=3.6e-12 Score=123.63 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=66.4
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCCc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
+++|...+.||+|+||.||+|... ++.. .+++.. .+
T Consensus 1 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-----~~ 75 (267)
T cd08224 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-----NN 75 (267)
T ss_pred CCceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-----CC
Confidence 357888999999999999999986 3322 233333 56
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .....+++.++..++.++++|+.|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFK--KQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhc--ccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999986432 12345889999999999999999999
No 80
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.34 E-value=1.8e-12 Score=124.99 Aligned_cols=83 Identities=25% Similarity=0.384 Sum_probs=69.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
..++|...+.||+|+||.||+|...+..+ .+++.. ....++|
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~v 78 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLYIV 78 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeEEE
Confidence 35678889999999999999998875544 344444 6778999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.++++... ...++|..+..++.|++.|+.|||
T Consensus 79 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lh 119 (256)
T cd05039 79 TEYMAKGSLVDYLRSRG----RAVITLAQQLGFALDVCEGMEYLE 119 (256)
T ss_pred EEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543 236899999999999999999999
No 81
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.34 E-value=1.6e-12 Score=125.79 Aligned_cols=83 Identities=19% Similarity=0.278 Sum_probs=68.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|.+.++.. .+++.. .+..++
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 78 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-----EEPIYI 78 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEec-----CCCeee
Confidence 45678888999999999999998755432 344554 667899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ...++|..+..++.+++.|+.|||
T Consensus 79 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH 120 (261)
T cd05068 79 VTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLE 120 (261)
T ss_pred eeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 346899999999999999999999
No 82
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.33 E-value=2.3e-12 Score=123.99 Aligned_cols=74 Identities=22% Similarity=0.366 Sum_probs=60.8
Q ss_pred CccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
+.||+|+||.||+|.... +.. .++|.. ....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCCeEEEEeec
Confidence 369999999999998742 321 455555 66789999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+|.++++... ..++|...+.++.|+++||+|||
T Consensus 76 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH 111 (252)
T cd05084 76 QGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLE 111 (252)
T ss_pred cCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999997543 35889999999999999999999
No 83
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.33 E-value=1.4e-12 Score=133.15 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q 039925 509 LVSVLTIGILCSVESPSERMEKPYIVSKLSHAR 541 (549)
Q Consensus 509 ~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~ 541 (549)
+.++.+++.+||+.+|++||++.+|++.|+++.
T Consensus 341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 456889999999999999999999999998763
No 84
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.33 E-value=2.1e-12 Score=126.36 Aligned_cols=80 Identities=24% Similarity=0.391 Sum_probs=64.6
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCc-----e-----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKW-----T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~-----~-----------------------------------~g~~~~~~~~~ 432 (549)
.++|...+.||+|+||.||+|.+. ++. + .|+|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 457888899999999999999863 222 1 344432
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++++||+++|+|.++++... ..+++...+.++.|+++||+|||
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH 126 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLE 126 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 34679999999999999998643 46889999999999999999999
No 85
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.33 E-value=1.9e-12 Score=125.87 Aligned_cols=80 Identities=21% Similarity=0.393 Sum_probs=64.6
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cc----e-----------------------------------eEEEeccccCCCc
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KW----T-----------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~----~-----------------------------------~g~~~~~~~~~~~ 434 (549)
.+|...+.||+|+||.||+|.+.. +. + .+++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----SR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----CC
Confidence 356778899999999999998743 21 1 333433 56
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++++... ..+++..++.++.|++.|++|||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH 123 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLS 123 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999997543 35889999999999999999999
No 86
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.33 E-value=2.3e-12 Score=127.78 Aligned_cols=87 Identities=20% Similarity=0.277 Sum_probs=66.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCC----C----c-e------------------------------------eEEEec
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE----K----W-T------------------------------------AGYSEG 427 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~----~-~------------------------------------~g~~~~ 427 (549)
..++|...+.||+|+||.||+|++.. . . + .+++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 34578888999999999999997421 0 0 1 344444
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++...... .....++|..++.++.|+++|++|||
T Consensus 93 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 154 (304)
T cd05101 93 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA 154 (304)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999764310 01245788899999999999999999
No 87
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.33 E-value=2.1e-12 Score=127.33 Aligned_cols=87 Identities=22% Similarity=0.265 Sum_probs=67.7
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc------e-------------------------------------eEEEeccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW------T-------------------------------------AGYSEGTD 429 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~------~-------------------------------------~g~~~~~~ 429 (549)
..++|...+.||+|+||.||+|.+.+.. . .+++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 4567888889999999999999864321 0 344444
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++.... ......++|..+++++.|++.|+.|||
T Consensus 88 ---~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 149 (293)
T cd05053 88 ---EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA 149 (293)
T ss_pred ---CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999864320 012356899999999999999999999
No 88
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.33 E-value=1.4e-12 Score=125.97 Aligned_cols=74 Identities=26% Similarity=0.387 Sum_probs=60.8
Q ss_pred CccccCceecEEEEEeCCCc---------e----------------------------------eEEEeccccCCCceEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW---------T----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~---------~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+.||+|+||.||+|...... + ++++.. .+..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 36999999999999864210 1 455655 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.++++..+ ..++|..++.++.|++.|++|||
T Consensus 76 lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 117 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK-----NLINISWKLEVAKQLAWALHFLE 117 (258)
T ss_pred EEEecCCCCcHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998654 36889999999999999999999
No 89
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.32 E-value=3.6e-12 Score=124.01 Aligned_cols=79 Identities=28% Similarity=0.419 Sum_probs=60.4
Q ss_pred CccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++||+|+||.||+|.+.+... ++++.. ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-----CCCceEEE
Confidence 369999999999998754221 344444 56689999
Q ss_pred eecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++.... ......+++.++..++.|++.|++|||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH 129 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 129 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875320 011235789999999999999999999
No 90
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.32 E-value=3.1e-12 Score=123.72 Aligned_cols=83 Identities=19% Similarity=0.313 Sum_probs=68.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|...++.. .+++.. ....++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~ 78 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EEPIYI 78 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CCceEE
Confidence 45688889999999999999998765422 333433 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... ...+++..+..++.+++.|+.|||
T Consensus 79 v~e~~~~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh 120 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLE 120 (261)
T ss_pred EEeccCCCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997643 346899999999999999999999
No 91
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.32 E-value=2.4e-12 Score=126.56 Aligned_cols=88 Identities=19% Similarity=0.313 Sum_probs=66.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC----C---ce-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE----K---WT-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~---~~-----------------------------------~g~~~~~~ 429 (549)
..+++|...+.||+|+||.||+|...+ . .+ ++++..
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-- 80 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK-- 80 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--
Confidence 456789999999999999999987542 1 11 344444
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCC----CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNN----KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~----~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++.... .......++.....++.|++.|+.|||
T Consensus 81 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 136 (288)
T cd05061 81 ---GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN 136 (288)
T ss_pred ---CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999975321 011234577788899999999999999
No 92
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.32 E-value=3e-12 Score=123.61 Aligned_cols=72 Identities=21% Similarity=0.389 Sum_probs=58.0
Q ss_pred ccccCceecEEEEEeC--CCc--e-----------------------------------eEEEeccccCCCceEEEEEee
Q 039925 402 MIGQGSFGSVYKGILG--EKW--T-----------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 402 ~lG~G~~g~Vy~~~~~--~~~--~-----------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
.||+|+||.||+|.+. ++. + .|+|. .+..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 3899999999999874 211 1 34443 3567899999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++|+|.+++.... ..+++..+++++.|+++||+|||
T Consensus 76 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 112 (257)
T cd05115 76 ASGGPLNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLE 112 (257)
T ss_pred CCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999997543 46899999999999999999999
No 93
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.31 E-value=3.6e-12 Score=123.22 Aligned_cols=82 Identities=20% Similarity=0.318 Sum_probs=66.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|...++.. .+++. ....++
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIYI 77 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcEE
Confidence 44678888999999999999998765432 22221 456789
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... ...+++.++..++.+++.|++|||
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIE 119 (260)
T ss_pred EEEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 345899999999999999999999
No 94
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.31 E-value=2.9e-12 Score=124.65 Aligned_cols=80 Identities=20% Similarity=0.347 Sum_probs=64.5
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-----ce-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-----WT-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~-----------------------------------~g~~~~~~~~~~ 433 (549)
-++|...+.||+|+||.||+|.+.+. .+ .+++. .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~------~ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT------E 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc------C
Confidence 34677888999999999999987543 11 34443 3
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ..+++..++.++.+++.|++|||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH 124 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLE 124 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999999997543 35899999999999999999999
No 95
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.31 E-value=5.5e-12 Score=122.40 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=65.5
Q ss_pred ccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|... ++.. ++++.. .+.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----CCe
Confidence 46788889999999999999963 3322 233443 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+++|||+++|+|.++++... .....++|.....++.++++|++|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFK--KQKRLIPEKTVWKYFVQLCSALEHMH 123 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987432 12346889999999999999999999
No 96
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.31 E-value=4.1e-12 Score=122.94 Aligned_cols=75 Identities=27% Similarity=0.437 Sum_probs=58.0
Q ss_pred CccccCceecEEEEEeCCC--c---e-----------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEK--W---T-----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~--~---~-----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|.+.+. . + .++|.. .+...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 4689999999999986321 1 1 344432 144578999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... ...++...+.++.|+++|++|||
T Consensus 77 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 115 (262)
T cd05058 77 PYMKHGDLRNFIRSET-----HNPTVKDLIGFGLQVAKGMEYLA 115 (262)
T ss_pred ecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 34677888999999999999999
No 97
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.31 E-value=3.5e-12 Score=122.87 Aligned_cols=80 Identities=21% Similarity=0.223 Sum_probs=65.4
Q ss_pred cCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||+|....... .+++.. .+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD-----KGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc-----CCEEE
Confidence 46777889999999999998753221 344444 57789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++++|.++++... ...+++....+++.++++|+.|||
T Consensus 76 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~~l~~al~~lH 118 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQR----GRPLPEDQVWRFFIQILLGLAHLH 118 (256)
T ss_pred EEEEeCCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998642 246889999999999999999999
No 98
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.31 E-value=3e-12 Score=123.63 Aligned_cols=46 Identities=11% Similarity=0.169 Sum_probs=40.4
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .+++.....++.|++.|++|||
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH 112 (257)
T cd05116 67 AESWMLVMELAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLE 112 (257)
T ss_pred CCCcEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 345689999999999999997543 5889999999999999999999
No 99
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.31 E-value=3.4e-12 Score=124.89 Aligned_cols=88 Identities=22% Similarity=0.342 Sum_probs=68.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-----Cce------------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-----KWT------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~------------------------------------~g~~~~~~~~ 431 (549)
..++|...++||+|+||.||+|.+.+ +.. +|++..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---- 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE---- 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 45678888999999999999999765 211 344433
Q ss_pred CCceEEEEEeecCCCCcccccccCCC--CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNN--KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~--~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++++||+++|+|.+++..... ......+++..+..++.|++.||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 134 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH 134 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 14677899999999999999875431 011256899999999999999999999
No 100
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.31 E-value=5.2e-12 Score=122.33 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=65.7
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..+.|...+.||+|+||.||+|.+.+... .+.+. ....++
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYI 77 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcEE
Confidence 34678888999999999999998755422 22221 355789
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... ...++|..+..++.|+++||+|||
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH 119 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVE 119 (262)
T ss_pred EEEcCCCCcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998543 245789999999999999999999
No 101
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.31 E-value=3.6e-12 Score=128.58 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=29.8
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 510 VSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 510 ~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
.++.+++..||+.+|++||++.||++.|+.+..
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 468899999999999999999999999988754
No 102
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.30 E-value=4.4e-12 Score=121.79 Aligned_cols=74 Identities=22% Similarity=0.429 Sum_probs=61.5
Q ss_pred CccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEEEEEeecC
Q 039925 401 NMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKAVVFDYMQ 444 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey~~ 444 (549)
++||+|+||.||+|...++.. .+.|.. ....++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEECCC
Confidence 369999999999998765432 455555 667899999999
Q ss_pred CCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 445 NRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 445 ~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+|.+++.... ..++|..++.++.|++.|+.|+|
T Consensus 76 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 110 (250)
T cd05085 76 GGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLE 110 (250)
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999987543 35789999999999999999999
No 103
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.30 E-value=4.3e-12 Score=127.62 Aligned_cols=85 Identities=21% Similarity=0.271 Sum_probs=65.1
Q ss_pred ccCcCCCccccCceecEEEEEeCCC---------ce------------------------------------eEEEeccc
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK---------WT------------------------------------AGYSEGTD 429 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~---------~~------------------------------------~g~~~~~~ 429 (549)
..|...+.||+|+||.||+|...+. .+ .++|..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc--
Confidence 3577788999999999999975210 01 344544
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++..... ......++|..++.++.|+++||.|||
T Consensus 90 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 151 (334)
T cd05100 90 ---DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA 151 (334)
T ss_pred ---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999975421 012346889999999999999999999
No 104
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.29 E-value=4.9e-12 Score=122.50 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=45.1
Q ss_pred eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 ~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|++.. ....++||||+++|+|..+++... ..+++..+.+++.|+|+||+|||
T Consensus 70 ~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 122 (262)
T cd05077 70 YGVCVR-----DVENIMVEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLE 122 (262)
T ss_pred EEEEec-----CCCCEEEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhh
Confidence 466665 667899999999999999887543 45889999999999999999999
No 105
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.29 E-value=5.5e-12 Score=125.64 Aligned_cols=87 Identities=21% Similarity=0.293 Sum_probs=66.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-------C--ce------------------------------------eEEEec
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-------K--WT------------------------------------AGYSEG 427 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-------~--~~------------------------------------~g~~~~ 427 (549)
..++|...+.||+|+||.||+|...+ . .+ .++|..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 34578888999999999999986421 0 01 344544
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++..... ......++|...++++.|++.|+.|||
T Consensus 90 -----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH 151 (314)
T cd05099 90 -----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE 151 (314)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999975431 011246899999999999999999999
No 106
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=4.4e-12 Score=130.49 Aligned_cols=199 Identities=30% Similarity=0.417 Sum_probs=149.0
Q ss_pred CEeecccccccccCCcccccccCccceeeecccccccccccccCCCC-CCCEEEeecceeeeeCCccccCCCCCCEEecc
Q 039925 84 EYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPS-AIQVMIFKENSLEGKFPNTLSNLRSLFYDNIN 162 (549)
Q Consensus 84 ~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (549)
..++++.|.+. ..+..+..++.+ +.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|+++
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l-~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~ 171 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNL-TSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLS 171 (394)
T ss_pred ceeeccccccc-cCchhhhcccce-eEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccC
Confidence 35777777775 234445556677 88888888887 4555566664 8888888888888 666778888899999999
Q ss_pred cCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccCh
Q 039925 163 RNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITL 241 (549)
Q Consensus 163 ~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
+|++. .+|......+ |+.|++++|+++ .+|..+. ....|++|.+++|.+. ..+.
T Consensus 172 ~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~----------------------~~~~L~~l~~~~N~~~-~~~~ 226 (394)
T COG4886 172 FNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIE----------------------LLSALEELDLSNNSII-ELLS 226 (394)
T ss_pred Cchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhh----------------------hhhhhhhhhhcCCcce-ecch
Confidence 98887 5555554666 888999999888 6776542 1125788888888543 3455
Q ss_pred hhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC
Q 039925 242 GIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL 320 (549)
Q Consensus 242 ~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 320 (549)
.+..+ .++..|.+.+|++... +..++.++++++|++++|.++ .++. +..+.+|+.|++++|.++..+|..
T Consensus 227 ~~~~~--~~l~~l~l~~n~~~~~-----~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 227 SLSNL--KNLSGLELSNNKLEDL-----PESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhhhc--ccccccccCCceeeec-----cchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhh
Confidence 67777 8888888999988731 466788889999999999998 4554 888999999999999998765543
No 107
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.29 E-value=4.7e-12 Score=122.17 Aligned_cols=72 Identities=22% Similarity=0.296 Sum_probs=58.4
Q ss_pred CccccCceecEEEEEeCCCc-----e-----------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW-----T-----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~-----~-----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|++.... + ++++. .+..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 46999999999999864322 1 23332 34678999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+++..++.++.|+++|++|||
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh 112 (257)
T cd05060 75 ELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLE 112 (257)
T ss_pred EeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998543 6889999999999999999999
No 108
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.29 E-value=5.3e-12 Score=125.02 Aligned_cols=84 Identities=21% Similarity=0.207 Sum_probs=67.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-------ce------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-------WT------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-------~~------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|...+. .+ .+++..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 110 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI- 110 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec-
Confidence 4556889999999999999999874210 00 344544
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... ...+++.+...++.+++.|++|||
T Consensus 111 ----~~~~~lv~e~~~~~~L~~~i~~~~----~~~l~~~~~~~i~~~i~~~l~~lH 158 (302)
T cd05055 111 ----GGPILVITEYCCYGDLLNFLRRKR----ESFLTLEDLLSFSYQVAKGMAFLA 158 (302)
T ss_pred ----CCceEEEEEcCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999997543 234899999999999999999999
No 109
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.29 E-value=3.2e-12 Score=125.04 Aligned_cols=83 Identities=19% Similarity=0.249 Sum_probs=65.7
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
.......+++|+|+||.||||.+.+..| +++-..-+ ..+....||+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~eywLVt 287 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEYWLVT 287 (534)
T ss_pred CCchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccceeEEe
Confidence 3345567789999999999999988776 11111100 0034689999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||.++|+|.+||+.. ..+|....+||..+|+||+|||
T Consensus 288 ~fh~kGsL~dyL~~n-------tisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKAN-------TISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred eeccCCcHHHHHHhc-------cccHHHHHHHHHHHHHHHHHhc
Confidence 999999999999975 4999999999999999999999
No 110
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.29 E-value=7.2e-12 Score=121.15 Aligned_cols=80 Identities=19% Similarity=0.318 Sum_probs=64.6
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.|.....||+|+||.||+|.+.++.. .+++ . ....++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~-----~~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV-S-----EEPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEE-c-----CCCcEEEE
Confidence 567788899999999999998765422 2222 2 45678999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... ...++|..+..++.+++.|++|||
T Consensus 80 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05069 80 EFMGKGSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIE 119 (260)
T ss_pred EcCCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 345889999999999999999999
No 111
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.29 E-value=5e-12 Score=122.24 Aligned_cols=82 Identities=17% Similarity=0.324 Sum_probs=66.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|...++.. .++. . .+..++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~-----~~~~~~ 77 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-T-----QEPIYI 77 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-c-----cCCcEE
Confidence 34678888999999999999999766543 1222 1 456799
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ...+++.++..++.|++.|++|||
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH 119 (260)
T cd05067 78 ITEYMENGSLVDFLKTPE----GIKLTINKLIDMAAQIAEGMAFIE 119 (260)
T ss_pred EEEcCCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999987543 346889999999999999999999
No 112
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.29 E-value=4.2e-12 Score=125.31 Aligned_cols=86 Identities=22% Similarity=0.303 Sum_probs=65.1
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc----------------e-----------------------------------e
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW----------------T-----------------------------------A 422 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~----------------~-----------------------------------~ 422 (549)
.+.|...+.||+|+||.||+++..+.. + +
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 356788889999999999987653210 0 4
Q ss_pred EEEeccccCCCceEEEEEeecCCCCcccccccCCCC------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 423 GYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 423 g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++.. ....++||||+++|+|.+++...... .....++|..+++++.|+++|++|||
T Consensus 84 ~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 146 (295)
T cd05097 84 GVCVS-----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA 146 (295)
T ss_pred EEEcC-----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 55544 67789999999999999998643200 01134788999999999999999999
No 113
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.28 E-value=3.4e-12 Score=124.60 Aligned_cols=87 Identities=20% Similarity=0.312 Sum_probs=67.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-------e-----------------------------------eEEEecccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-------T-----------------------------------AGYSEGTDF 430 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~-----------------------------------~g~~~~~~~ 430 (549)
..++|...+.||+|+||.||+|...+.. + ++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 3467888899999999999999875322 1 345554
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCC----CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKL----KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~----~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++....... ....++|...+.++.|++.|+.|||
T Consensus 81 --~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 136 (277)
T cd05032 81 --GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA 136 (277)
T ss_pred --CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 577899999999999999997543100 1235789999999999999999999
No 114
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.28 E-value=3.8e-12 Score=122.60 Aligned_cols=80 Identities=25% Similarity=0.413 Sum_probs=65.2
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce--------------------------------eEEEeccccCCCceEEEEEee
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
++|...+.||+|+||.||+|...+..+ .+++. .+..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~------~~~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVIL------HNGLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEc------CCCcEEEEEC
Confidence 568888999999999999998765443 33333 2446899999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++|+|.++++... ...+++..++.++.|++.|+.|||
T Consensus 80 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~al~~lH 117 (254)
T cd05083 80 MSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAEGMEYLE 117 (254)
T ss_pred CCCCCHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999997543 345789999999999999999999
No 115
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.28 E-value=6.6e-12 Score=122.97 Aligned_cols=82 Identities=20% Similarity=0.329 Sum_probs=64.2
Q ss_pred ccCcCCCccccCceecEEEEEeCCC-----ce------------------------------------eEEEeccccCCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK-----WT------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~------------------------------------~g~~~~~~~~~~ 433 (549)
++|...+.||+|+||.||+|++... .. .+++.. .+.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 3566778899999999999987422 11 233322 124
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.+++.... ..++|..++.++.|++.||+|||
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH 126 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLG 126 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999998643 35899999999999999999999
No 116
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.28 E-value=7.3e-12 Score=122.82 Aligned_cols=81 Identities=15% Similarity=0.325 Sum_probs=62.7
Q ss_pred cCcCCCccccCceecEEEEEeCC-----Cc-e-----------------------------------eEEEeccccCCCc
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-----KW-T-----------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-----~~-~-----------------------------------~g~~~~~~~~~~~ 434 (549)
.|...+.||+|+||.||++.+.. +. + .+++... +..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCC
Confidence 45677889999999999998531 11 1 2344331 135
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... ..++|..++.++.|++.||+|||
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH 126 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLG 126 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999997543 35899999999999999999999
No 117
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.28 E-value=8.8e-12 Score=121.11 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=68.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
.+++++.....||+|+||.||+|...+... +|++.. .+.
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 79 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-----NGF 79 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----CCE
Confidence 467888888899999999999998654322 455555 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCC--chhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSL--SMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l--~~~~~~~ia~~va~gl~yLH 484 (549)
.++|+||+++++|.++++... ..+ ++..+..++.|+++|++|||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH 125 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKW-----GPLKDNEQTIIFYTKQILEGLKYLH 125 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhc-----ccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998643 234 77788889999999999999
No 118
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.27 E-value=6.3e-12 Score=123.05 Aligned_cols=86 Identities=21% Similarity=0.343 Sum_probs=66.3
Q ss_pred cccCcCCCccccCceecEEEEEeCCC------c-e----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK------W-T----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~------~-~----------------------------------~g~~~~~~~~~ 432 (549)
..++.....||+|+||.||++...+. . + .+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 78 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE----- 78 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-----
Confidence 45677889999999999999964321 1 1 355555
Q ss_pred CceEEEEEeecCCCCcccccccCCC---------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNN---------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~---------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++.... ......++|..++.++.|++.|++|||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 139 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA 139 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999975430 011235889999999999999999999
No 119
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=4.9e-12 Score=113.40 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=71.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~ 433 (549)
+-++|..++.||+|.||.||.|+.+.... +|++.+ .
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-----~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD-----S 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-----c
Confidence 45789999999999999999999765432 577777 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...||++||.++|++++.|+... ...++......+..|+|.|+.|+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~----~~~f~e~~~a~Yi~q~A~Al~y~h 141 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR----MKRFDEQRAATYIKQLANALLYCH 141 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc----cccccccchhHHHHHHHHHHHHhc
Confidence 88999999999999999999654 456888888899999999999999
No 120
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.27 E-value=5.5e-12 Score=123.33 Aligned_cols=86 Identities=22% Similarity=0.353 Sum_probs=67.3
Q ss_pred cccCcCCCccccCceecEEEEEeCCC------c-e-----------------------------------eEEEeccccC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK------W-T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~------~-~-----------------------------------~g~~~~~~~~ 431 (549)
.++|...+.||+|+||.||+|...+. . + .+++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE---- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec----
Confidence 45678888999999999999987433 1 1 344444
Q ss_pred CCceEEEEEeecCCCCcccccccCCC--------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNN--------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~--------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++.... ......+++.+...++.|++.|+.|||
T Consensus 80 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 139 (280)
T cd05049 80 -GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA 139 (280)
T ss_pred -CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 5678999999999999999975431 112346889999999999999999999
No 121
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.27 E-value=6e-12 Score=123.38 Aligned_cols=85 Identities=24% Similarity=0.344 Sum_probs=64.2
Q ss_pred ccCcCCCccccCceecEEEEEeC--C---Cce------------------------------------eEEEeccccCCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG--E---KWT------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~--~---~~~------------------------------------~g~~~~~~~~~~ 433 (549)
++|...+.||+|+||.||+|.+. + +.. .+++.. .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ-----E 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec-----C
Confidence 56777889999999999999852 1 111 344444 5
Q ss_pred ceEEEEEeecCCCCcccccccCCC-----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNN-----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~-----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.+++..... +.....+++.+.+.++.|++.||+|||
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 141 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999863320 001235788999999999999999999
No 122
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.27 E-value=5.9e-12 Score=135.50 Aligned_cols=143 Identities=18% Similarity=0.280 Sum_probs=104.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCC---C----ce--------------------------------------eEEEec
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE---K----WT--------------------------------------AGYSEG 427 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---~----~~--------------------------------------~g~~~~ 427 (549)
..+++...+.+|+|.||.|++|...+ + .. .|+|..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 44455566689999999999998531 1 11 688887
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCC---CCCC-----C--CCCchhhhHHHHHHHHHHHHHhh-------------
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSN---NKLK-----P--SSLSMIRKLSTTIDVASAIEYLR------------- 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~---~~~~-----~--~~l~~~~~~~ia~~va~gl~yLH------------- 484 (549)
+...++|+||++.|+|.++|+..+ .-.. . ..++....+.+|.|||.||+||+
T Consensus 374 -----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 374 -----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred -----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 788999999999999999998654 0000 1 24888899999999999999998
Q ss_pred ---------------------------------------------------------------------ccccCCc----
Q 039925 485 ---------------------------------------------------------------------VKMALPE---- 491 (549)
Q Consensus 485 ---------------------------------------------------------------------~~~~~~~---- 491 (549)
....+++
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 0001111
Q ss_pred -ceeeecc-CcccchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q 039925 492 -KVMEIVE-SSLLLEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHA 540 (549)
Q Consensus 492 -~~~~~~~-~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~ 540 (549)
.+.+.+. ......+..|..+++++|..||+.+|++||+|.++++.++..
T Consensus 529 ~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 529 EELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 0001111 111233467889999999999999999999999999999884
No 123
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.27 E-value=7.7e-12 Score=123.46 Aligned_cols=86 Identities=17% Similarity=0.255 Sum_probs=65.3
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-----------------c-e----------------------------------
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-----------------W-T---------------------------------- 421 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-----------------~-~---------------------------------- 421 (549)
.++|...+.||+|+||.||++...+. . +
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 45688889999999999998753210 0 0
Q ss_pred -eEEEeccccCCCceEEEEEeecCCCCcccccccCCCC-----CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 -AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK-----LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 -~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~-----~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.. .+..++||||+++|+|.+++...... .....+++.....++.|++.|++|||
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH 147 (296)
T cd05095 84 LLAVCIT-----SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS 147 (296)
T ss_pred EEEEEec-----CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 344444 56789999999999999998764311 11235788899999999999999999
No 124
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.27 E-value=1e-11 Score=120.58 Aligned_cols=81 Identities=19% Similarity=0.239 Sum_probs=66.7
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+|+... +.. .+++.. .+..
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-----~~~~ 81 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-----REKL 81 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-----CCEE
Confidence 45678899999999999999998743 222 344444 6778
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... .+++..+..++.|++.|+.|||
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH 123 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLH 123 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987543 5788999999999999999999
No 125
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.27 E-value=7.8e-12 Score=122.27 Aligned_cols=80 Identities=21% Similarity=0.358 Sum_probs=65.1
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cc-----e-----------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KW-----T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-----~-----------------------------------~g~~~~~~~~~ 432 (549)
.++|...+.||+|+||.||+|.+.+ +. + .|+|..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 4567888899999999999998642 21 1 344442
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.++++... ..+++...+.++.|+++|++|||
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH 126 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHK-----DNIGSQYLLNWCVQIAKGMSYLE 126 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999998643 35899999999999999999999
No 126
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.26 E-value=7.4e-12 Score=120.69 Aligned_cols=81 Identities=27% Similarity=0.428 Sum_probs=66.1
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
..+|...+.||+|+||.||+|.+..+.. ++++.. ....++|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-----RSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-----CCceEEE
Confidence 3567778899999999999998753322 344444 5678999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.++++... ..++|.....++.+++.|++|||
T Consensus 78 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH 117 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLE 117 (256)
T ss_pred EEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987543 35789999999999999999999
No 127
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.26 E-value=7.9e-12 Score=121.50 Aligned_cols=82 Identities=21% Similarity=0.243 Sum_probs=64.1
Q ss_pred cCcCCCccccCceecEEEEEeCC--Cce----------------------------------------------eEEEec
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE--KWT----------------------------------------------AGYSEG 427 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~----------------------------------------------~g~~~~ 427 (549)
+|...+.||+|+||.||+|.+.+ +.. ++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778899999999999999865 111 233333
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++++|.+++.... .....+++..+++++.|++.||.|||
T Consensus 81 -----~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh 130 (269)
T cd08528 81 -----NDRLYIVMDLIEGAPLGEHFNSLK--EKKQRFTEERIWNIFVQMVLALRYLH 130 (269)
T ss_pred -----CCeEEEEEecCCCCcHHHHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 567899999999999999885422 01346888899999999999999999
No 128
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.26 E-value=1.3e-11 Score=120.12 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=60.2
Q ss_pred CccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCceEEEEEe
Q 039925 401 NMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
+.||+|+||.||+|.+.++.. +|++.. ....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-----VTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----CCCcEEEEE
Confidence 358999999999998754321 455555 567899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.++++.... ......++.....++.|+++|++|||
T Consensus 76 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH 117 (269)
T cd05087 76 FCPLGDLKGYLRSCRK-AELMTPDPTTLQRMACEIALGLLHLH 117 (269)
T ss_pred CCCCCcHHHHHHHhhh-cccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999975431 11234677778899999999999999
No 129
>PLN03150 hypothetical protein; Provisional
Probab=99.26 E-value=2.3e-11 Score=131.24 Aligned_cols=121 Identities=29% Similarity=0.450 Sum_probs=100.9
Q ss_pred cccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCC
Q 039925 224 TATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNL 303 (549)
Q Consensus 224 ~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 303 (549)
.++.|+|++|.+.+.+|..+..+ ++|+.|+|++|.++|.+ |..++.+++|+.|+|++|++++.+|..++++++|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L--~~L~~L~Ls~N~l~g~i----P~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L 492 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKL--RHLQSINLSGNSIRGNI----PPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSL 492 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCC--CCCCEEECCCCcccCcC----ChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCC
Confidence 37889999999999999999999 99999999999999877 5678999999999999999999999999999999
Q ss_pred CEEEccCCcccccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCCCccccCcccCCC
Q 039925 304 MELSVSRNKLSASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGGLDELHLLSCHS 364 (549)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~~~~~~~~~~~~ 364 (549)
+.|+|++|+++|.+|.. +.. . +.. ...+.+.+|+.+|+.+. ...|..
T Consensus 493 ~~L~Ls~N~l~g~iP~~-l~~-----~----~~~-~~~l~~~~N~~lc~~p~---l~~C~~ 539 (623)
T PLN03150 493 RILNLNGNSLSGRVPAA-LGG-----R----LLH-RASFNFTDNAGLCGIPG---LRACGP 539 (623)
T ss_pred CEEECcCCcccccCChH-Hhh-----c----ccc-CceEEecCCccccCCCC---CCCCcc
Confidence 99999999999988864 110 0 000 11267899999998542 356754
No 130
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.26 E-value=8.8e-12 Score=125.37 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 509 LVSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 509 ~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
..++.+++.+||+.+|++||++.||++.|+.+..
T Consensus 302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 3567899999999999999999999999988754
No 131
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.26 E-value=1.3e-11 Score=120.87 Aligned_cols=77 Identities=19% Similarity=0.308 Sum_probs=59.5
Q ss_pred cCCCccccCceecEEEEEeC-----CCce------------------------------------eEEEeccccCCCceE
Q 039925 398 SSSNMIGQGSFGSVYKGILG-----EKWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 398 ~~~~~lG~G~~g~Vy~~~~~-----~~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
...+.||+|+||.||++.+. ++.. .+++... .....
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CCceE
Confidence 66788999999999886542 1111 3444331 13457
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++... .++|.++..++.|+++|++|||
T Consensus 84 ~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH 124 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLH 124 (283)
T ss_pred EEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999753 4899999999999999999999
No 132
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.25 E-value=7.9e-12 Score=123.86 Aligned_cols=81 Identities=25% Similarity=0.377 Sum_probs=64.9
Q ss_pred ccccCcCCCccccCceecEEEEEeC-CCc-----e-----------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-EKW-----T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~-----~-----------------------------------~g~~~~~~~~ 431 (549)
..++|...+.||+|+||.||+|.+. ++. + +|.|..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---- 80 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS---- 80 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC----
Confidence 4567888899999999999999863 221 1 444543
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....+++||+++|+|.+++.... ..+++...+.++.|+++||+|||
T Consensus 81 --~~~~~v~e~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH 126 (303)
T cd05110 81 --PTIQLVTQLMPHGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLE 126 (303)
T ss_pred --CCceeeehhcCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHh
Confidence 34678999999999999987643 35888999999999999999999
No 133
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.25 E-value=1.3e-11 Score=119.94 Aligned_cols=79 Identities=24% Similarity=0.415 Sum_probs=61.5
Q ss_pred CccccCceecEEEEEeCCCc--------e-----------------------------------eEEEeccccCCCceEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW--------T-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~--------~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+.||+|+||.||+|...+.. + .++|.. .+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-----NEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-----CCCeE
Confidence 36999999999999874311 1 345554 56789
Q ss_pred EEEeecCCCCcccccccCCCCC-CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKL-KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~-~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.++++...... ....++|.+++.++.|++.|++|||
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE 123 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997543111 2345889999999999999999999
No 134
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.25 E-value=1.5e-11 Score=121.26 Aligned_cols=87 Identities=21% Similarity=0.271 Sum_probs=67.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc------------------e---------------------------------
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW------------------T--------------------------------- 421 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~------------------~--------------------------------- 421 (549)
+.++|...+.||+|+||.||+|...+.. +
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 3567888999999999999998764311 0
Q ss_pred --eEEEeccccCCCceEEEEEeecCCCCcccccccCCCC-----CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 --AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK-----LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 --~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~-----~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+++.. .+..++||||+++|+|.+++...... .....+++...+.++.|+++|++|||
T Consensus 83 ~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH 147 (296)
T cd05051 83 RLLGVCTV-----DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE 147 (296)
T ss_pred EEEEEEec-----CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344444 57789999999999999998754310 01236899999999999999999999
No 135
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.25 E-value=1.4e-11 Score=119.06 Aligned_cols=81 Identities=14% Similarity=0.288 Sum_probs=64.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.+.|...+.||+|+||.||+|.+.++.. .+.+. ....+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------~~~~~~v 78 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIYII 78 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEc------CCCeEEE
Confidence 4568888999999999999998754432 12222 2467899
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++.... ...++|..++.++.+++.|++|||
T Consensus 79 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 79 TEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred EEeCCCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997643 346889999999999999999999
No 136
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.25 E-value=2e-11 Score=118.64 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=58.7
Q ss_pred ccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCCceEEEEEee
Q 039925 402 MIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 402 ~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
.||+|+||.||+|...++. . .+.|.. ....++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEec
Confidence 5999999999999754322 1 345554 5678999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++|+|.++++.... .....++.....++.|+|+||+|||
T Consensus 77 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH 116 (268)
T cd05086 77 CELGDLKSYLSQEQW--HRRNSQLLLLQRMACEIAAGVTHMH 116 (268)
T ss_pred CCCCcHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999986431 1234566677889999999999999
No 137
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.24 E-value=7.1e-12 Score=122.82 Aligned_cols=85 Identities=21% Similarity=0.318 Sum_probs=64.0
Q ss_pred ccCcCCCccccCceecEEEEEeCCC------c-e-----------------------------------eEEEeccccCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK------W-T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~------~-~-----------------------------------~g~~~~~~~~~ 432 (549)
.+|...+.||+|+||.||+|...+. . + .+++..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~----- 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK----- 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-----
Confidence 3566677899999999999986432 1 1 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++++||+++++|.+++..+.. ......+++..+.+++.|+++||+|||
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH 141 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS 141 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999853210 011235788889999999999999999
No 138
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.24 E-value=1.4e-11 Score=118.68 Aligned_cols=80 Identities=13% Similarity=0.109 Sum_probs=63.5
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e------------------------------------eEEEeccccCCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
+|...+.||+|+||.||++...... . .+++.. .+..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-----DGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEEE
Confidence 4666788999999999999864322 1 234444 678899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ...+++...+.++.++++||.|||
T Consensus 76 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH 117 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIH 117 (255)
T ss_pred EEeeCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999987533 245788888999999999999999
No 139
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.23 E-value=1.5e-11 Score=119.71 Aligned_cols=89 Identities=18% Similarity=0.211 Sum_probs=68.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCC-Cc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKG-ID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~-~~ 434 (549)
.+++.|...+.||+|+||.||+|...+... .+++......+ ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 467788889999999999999998754321 34443211111 24
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... ...++|.....++.|++.|++|||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH 128 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLH 128 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999988643 246889999999999999999999
No 140
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.23 E-value=1.5e-11 Score=119.89 Aligned_cols=85 Identities=19% Similarity=0.332 Sum_probs=66.5
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-------e-----------------------------------eEEEeccccCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-------T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~-----------------------------------~g~~~~~~~~~ 432 (549)
++|.....||+|+||.||+|+..... + ++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE----- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-----
Confidence 57888899999999999999864211 1 344444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCC---CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKL---KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~---~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++...... ....+++..+..++.|+++|++|||
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH 134 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS 134 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh
Confidence 567899999999999999997543100 1126899999999999999999999
No 141
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.22 E-value=1.3e-11 Score=119.01 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=64.6
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||+|...... . .+.+.. ....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-----NGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-----CCeEE
Confidence 3667788999999999999985422 1 233443 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+||+++++|.+++.... ...++|..+..++.|+++|+.|||
T Consensus 76 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh 118 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQR----GVLFSEDQILSWFVQISLGLKHIH 118 (257)
T ss_pred EEEecCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997543 245799999999999999999999
No 142
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.22 E-value=5.2e-11 Score=116.32 Aligned_cols=78 Identities=22% Similarity=0.329 Sum_probs=63.8
Q ss_pred ccCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..|...+.||+|+||.||+|..... .. .+++.. ....+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----GTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCEEE
Confidence 3566778899999999999987542 21 344554 67899
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++... .+++.....++.+++.|++|||
T Consensus 79 lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh 118 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLH 118 (277)
T ss_pred EEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998743 4788888999999999999999
No 143
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.21 E-value=3.5e-11 Score=119.50 Aligned_cols=79 Identities=19% Similarity=0.192 Sum_probs=66.1
Q ss_pred ccCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||++..... .+ ++++.. .+..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-----DGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----CCEEE
Confidence 4688889999999999999986532 21 455655 67899
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.++++... .+++.....++.|+++||.|||
T Consensus 76 lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH 116 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLR 116 (308)
T ss_pred EEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997543 5788888999999999999999
No 144
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.20 E-value=2.7e-11 Score=116.85 Aligned_cols=79 Identities=34% Similarity=0.500 Sum_probs=62.2
Q ss_pred CccccCceecEEEEEeCCC---c--e-----------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEK---W--T-----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~---~--~-----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|...+. . + .+++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4699999999999998643 1 1 344444 67789999
Q ss_pred eecCCCCcccccccCCCC---CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNK---LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~---~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++...... .....+++..+..++.++++|++|||
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 122 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA 122 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999865200 01256899999999999999999999
No 145
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.20 E-value=3.1e-11 Score=116.40 Aligned_cols=82 Identities=29% Similarity=0.409 Sum_probs=70.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..-++|...+.||+|+||+||+|+.+.... +.++.. .
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-----~ 81 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-----D 81 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-----C
Confidence 345688888899999999999999864332 345555 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++.++|||||.+|+|.+||+.++ .++......+..|+|.||+|||
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRG------RLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999764 6889999999999999999999
No 146
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.20 E-value=2.3e-11 Score=117.21 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=63.4
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
.|...+.||+|+||.||++.... +.. .+++.. .+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-----NGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-----CCeEE
Confidence 36677889999999999988643 221 233333 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++.+.++++.|++.|+.|||
T Consensus 76 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh 118 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQR----GVLFPEDQILDWFVQICLALKHVH 118 (256)
T ss_pred EEEecCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987543 235788899999999999999999
No 147
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.20 E-value=2.3e-11 Score=118.79 Aligned_cols=77 Identities=25% Similarity=0.318 Sum_probs=62.2
Q ss_pred cCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
.|...+.||+|+||.||+|..... .. .+++.. ....++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-----GTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-----CCceEE
Confidence 355667899999999999987532 21 233443 667899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++... .+++.....++.|+++|+.|||
T Consensus 80 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH 118 (277)
T cd06642 80 IMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLH 118 (277)
T ss_pred EEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998643 4889999999999999999999
No 148
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19 E-value=2.7e-11 Score=122.45 Aligned_cols=79 Identities=14% Similarity=0.228 Sum_probs=69.7
Q ss_pred ccCcCCCccccCceecEEEEEe-CCCce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGIL-GEKWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
..|..+++||+|||+.||+++. ..|.+ ++++.+ .+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-----s~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-----SNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-----CCc
Confidence 4588999999999999999997 55554 466766 789
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.|+|.|+|++|+|..+++.. .++++.....+.+||+.||.|||
T Consensus 93 VYivLELC~~~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH 135 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLH 135 (592)
T ss_pred eEEEEEecCCccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999854 47999999999999999999999
No 149
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.19 E-value=2.7e-11 Score=116.62 Aligned_cols=80 Identities=15% Similarity=0.155 Sum_probs=63.3
Q ss_pred cCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||++....... .+.+.. .+..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 36667889999999999988643221 222222 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++..+..++.++++|+.|||
T Consensus 76 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh 118 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRC----NSLLDEDTILHFFVQILLALHHVH 118 (256)
T ss_pred EEEecCCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997643 345889999999999999999999
No 150
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.19 E-value=3.9e-11 Score=120.47 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=66.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-e------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-T------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.++|...+.||+|+||.||+++..... . ++++.. .+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CCEE
Confidence 467888899999999999999875322 1 455555 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... .+++.....++.++++|+.|||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH 120 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLR 120 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997543 5788888999999999999999
No 151
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.19 E-value=3.3e-11 Score=121.06 Aligned_cols=81 Identities=19% Similarity=0.202 Sum_probs=68.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCce
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
..++|...+.||+|+||.||++..... .+ ++++.. .+.
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 77 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGE 77 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCE
Confidence 346889999999999999999987532 22 466666 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .+++.....++.++++||+|||
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH 120 (333)
T cd06650 78 ISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLR 120 (333)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997543 5788888899999999999999
No 152
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.18 E-value=4.3e-11 Score=116.30 Aligned_cols=77 Identities=18% Similarity=0.187 Sum_probs=59.6
Q ss_pred ccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCceEEEEEee
Q 039925 402 MIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 402 ~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
.||+|+||.||+|...++.. +|+|.. ....++||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-----~~~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-----SIPYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-----CCceEEEEEe
Confidence 59999999999997533211 455555 6778999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++|+|.+++..... ......++.....++.|+++|++|||
T Consensus 77 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH 117 (269)
T cd05042 77 CPLGDLKNYLRSNRG-MVAQMAQKDVLQRMACEVASGLLWLH 117 (269)
T ss_pred CCCCcHHHHHHhccc-cccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999976541 11234567778899999999999999
No 153
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.18 E-value=6.2e-11 Score=116.31 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=69.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
.++++|...+.||+|+||.||+|...... . ++++........+.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 58889999999999999999999874322 1 34443222223457
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .....+++.....++.|+++|+.|||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH 141 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFL--KRGERMEEPIIAYILHEALMGLQHLH 141 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhh--ccCccccHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999886422 01246788888999999999999999
No 154
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.18 E-value=2.4e-11 Score=119.15 Aligned_cols=80 Identities=16% Similarity=0.146 Sum_probs=65.6
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.++|...+.||+|+||.||++.... +.. .+++.. ....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-----ENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-----CCEE
Confidence 3567778899999999999998753 322 344544 5778
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++..+ .+++.....++.++++|+.|||
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH 120 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLY 120 (284)
T ss_pred EEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987543 5889999999999999999998
No 155
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.18 E-value=5.2e-11 Score=114.36 Aligned_cols=74 Identities=28% Similarity=0.485 Sum_probs=60.6
Q ss_pred CccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEEEEEeecC
Q 039925 401 NMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKAVVFDYMQ 444 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey~~ 444 (549)
+.||+|+||.||++...++.. .+++.. ....++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-----KQPIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----CCCeEEEEEcCC
Confidence 369999999999998764332 344444 567899999999
Q ss_pred CCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 445 NRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 445 ~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++|.++++... ..+++...+.++.+++.|++|||
T Consensus 76 ~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH 110 (251)
T cd05041 76 GGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLE 110 (251)
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999997543 35788899999999999999999
No 156
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.17 E-value=5.2e-11 Score=115.45 Aligned_cols=78 Identities=17% Similarity=0.331 Sum_probs=64.6
Q ss_pred cCcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEeccccCCCc
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~~~~~ 434 (549)
+|...+.||+|+||.||+|...++.. .++|.. .+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~ 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-----DN 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-----CC
Confidence 46778899999999999998755442 344544 57
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|++.|++|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 119 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLH 119 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999997543 5788888999999999999999
No 157
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.17 E-value=4.3e-11 Score=123.14 Aligned_cols=192 Identities=28% Similarity=0.332 Sum_probs=132.3
Q ss_pred EEEccCCcceecCCccccCCCCCCEeecccccccccCCccccccc-CccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 61 FINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCS-NLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 61 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
.+++..|.+. .....+..++.++.|++.+|.++ .+|.....+. +| +.|++++|.+. .+|..++.+++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL-~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNL-KELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhc-ccccccccchh-hhhhhhhccccccccccCC
Confidence 5777777774 23344566688999999999998 7887777774 88 99999999987 4556778899999999999
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccccc
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYW 218 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~ 218 (549)
|++. .+|.....+++|+.|++++|++. .+|....... |++|.+++|... ..+..+. ++.++
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~-~~~~l-------------- 234 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLS-NLKNL-------------- 234 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhh-hcccc--------------
Confidence 9998 67776668889999999999988 6676666666 899999998644 3444443 44433
Q ss_pred ccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCcccc
Q 039925 219 SDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQ 290 (549)
Q Consensus 219 l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (549)
..+.+.+|++.. .+..+..+ ++++.|++++|.++ .+ +. ++.+.+++.|++++|.+.
T Consensus 235 -------~~l~l~~n~~~~-~~~~~~~l--~~l~~L~~s~n~i~-~i----~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 235 -------SGLELSNNKLED-LPESIGNL--SNLETLDLSNNQIS-SI----SS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred -------cccccCCceeee-ccchhccc--cccceecccccccc-cc----cc-ccccCccCEEeccCcccc
Confidence 334444554442 23444555 55666666666665 22 22 555666666666666555
No 158
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.17 E-value=8.7e-11 Score=113.12 Aligned_cols=81 Identities=26% Similarity=0.305 Sum_probs=68.1
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-ce---------------------------------eEEEeccccCCCceEEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-WT---------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~---------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.++|...+.||+|+||.||+|.+.+. .. .|.+.. ....+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~ 76 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFK-----NTDLWIV 76 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-----CCcEEEE
Confidence 46788899999999999999998652 22 345555 6788999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||+++++|.+++.... ..++|.....++.|+++|+.|||
T Consensus 77 ~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh 116 (256)
T cd06612 77 MEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLH 116 (256)
T ss_pred EecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543 46899999999999999999999
No 159
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.16 E-value=6.5e-11 Score=115.62 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=62.8
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
-|...+.||+|+||.||+|.... +.. ++++.. ....++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-----CCeEEE
Confidence 35667789999999999998643 222 344444 677899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++... .+++.....++.+++.|+.|||
T Consensus 80 v~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh 118 (277)
T cd06641 80 IMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLH 118 (277)
T ss_pred EEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHc
Confidence 99999999999998743 4789999999999999999999
No 160
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.15 E-value=9.8e-11 Score=123.43 Aligned_cols=146 Identities=13% Similarity=0.146 Sum_probs=107.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce---------------------------------eEEEe-ccc---cCC-C
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT---------------------------------AGYSE-GTD---FKG-I 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~---------------------------------~g~~~-~~~---~~~-~ 433 (549)
..-.+...++|.+|||+.||.|....+ .. ++|+. .+. ..+ .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 445667788999999999999997655 21 45554 211 112 3
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-----------------------------
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR----------------------------- 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH----------------------------- 484 (549)
-+.+|.||||++|+|-+++..+. ...|+....++|+.|+|+|+++||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rl----q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRL----QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHH----hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 46789999999999999998554 234999999999999999999999
Q ss_pred ---------------------------------------------------------------ccccCCcc-eeeeccCc
Q 039925 485 ---------------------------------------------------------------VKMALPEK-VMEIVESS 500 (549)
Q Consensus 485 ---------------------------------------------------------------~~~~~~~~-~~~~~~~~ 500 (549)
....+.+. -..|++..
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~ 270 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGN 270 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecc
Confidence 11111221 33444443
Q ss_pred cc-chHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhh
Q 039925 501 LL-LEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARE 542 (549)
Q Consensus 501 ~~-~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~ 542 (549)
.. +..+.....+.+|+..|++.+|++||+..+|...+-+++.
T Consensus 271 Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 271 YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 32 2225677889999999999999999999999998888764
No 161
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.15 E-value=3.9e-11 Score=117.79 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=63.1
Q ss_pred CcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCCceEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
|...+.||+|+||.||+|... ++.. .+++.. .+..+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-----~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-----CCeEE
Confidence 566788999999999999864 3322 233333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++..+..++.|++.|++|||
T Consensus 77 lv~e~~~~g~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH 119 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMG----NPGFDEQRAIFYAAELCCGLEDLQ 119 (285)
T ss_pred EEEEecCCCcHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998886433 235889999999999999999999
No 162
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.15 E-value=7.4e-11 Score=114.86 Aligned_cols=88 Identities=30% Similarity=0.476 Sum_probs=59.5
Q ss_pred CcCCCccccCceecEEEEEeCCC----c-e------------------------------------eEEEeccccCC-Cc
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEK----W-T------------------------------------AGYSEGTDFKG-ID 434 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~----~-~------------------------------------~g~~~~~~~~~-~~ 434 (549)
|...++||+|+||.||+|.+... . + .+++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 45677899999999999986421 1 1 23332210000 11
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++++||+++|+|.+++...........+++...+.++.|++.|++|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 130 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS 130 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34788999999999988753321111235788889999999999999999
No 163
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.14 E-value=9.9e-11 Score=115.57 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=65.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
.....|...+.||+|+||.||+|+... +.. .+.+.. ...
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~ 91 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE 91 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCE
Confidence 345578888899999999999998643 221 344444 668
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++.. .+++.+...++.|++.|++|||
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH 133 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLH 133 (296)
T ss_pred EEEeecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998643 4788999999999999999999
No 164
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.14 E-value=9.9e-11 Score=112.81 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=64.0
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|+..+.||+|+||.||.+.... +.. .+++.. .+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-----DNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-----CCeEE
Confidence 36677899999999998877533 211 344544 67789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++.+...++.|+++|++|||
T Consensus 76 ~~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh 118 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIH 118 (256)
T ss_pred EEEEecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 246889999999999999999999
No 165
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=1.8e-11 Score=118.99 Aligned_cols=80 Identities=25% Similarity=0.312 Sum_probs=62.2
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
..-|+..+.||+|+||.||||.... +++ +|.+.. ...+
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-----g~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-----GTKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-----cccH
Confidence 3457777899999999999998643 222 333333 5677
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++||||.+|++.+.|+... .++.....-|.+++..|+.|||
T Consensus 87 wiiMey~~gGsv~~lL~~~~------~~~E~~i~~ilre~l~~l~ylH 128 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGN------ILDEFEIAVILREVLKGLDYLH 128 (467)
T ss_pred HHHHHHhcCcchhhhhccCC------CCccceeeeehHHHHHHhhhhh
Confidence 89999999999999998654 3466666668899999999999
No 166
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.13 E-value=1e-10 Score=115.13 Aligned_cols=91 Identities=15% Similarity=0.067 Sum_probs=69.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
.++++|...+.||+|+||.||++...+ +.. .+++...+......
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~ 98 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ 98 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence 678899999999999999999998743 221 34443322112346
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .....++|..+..++.|++.||+|||
T Consensus 99 ~~lv~ey~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH 145 (291)
T cd06639 99 LWLVLELCNGGSVTELVKGLL--ICGQRLDEAMISYILYGALLGLQHLH 145 (291)
T ss_pred eEEEEEECCCCcHHHHHHHhh--hcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999886422 11346889999999999999999999
No 167
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.13 E-value=1.1e-10 Score=112.51 Aligned_cols=73 Identities=29% Similarity=0.473 Sum_probs=59.2
Q ss_pred CccccCceecEEEEEeCCCc------------e---------------------------------eEEEeccccCCCce
Q 039925 401 NMIGQGSFGSVYKGILGEKW------------T---------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~------------~---------------------------------~g~~~~~~~~~~~~ 435 (549)
+.||+|+||.||+|.+.+.. + .|+|.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR------DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec------CC
Confidence 36899999999999986433 1 344432 35
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ..+++..++.++.|++.||.|||
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH 118 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLE 118 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh
Confidence 689999999999999998643 26889999999999999999999
No 168
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.13 E-value=4.7e-11 Score=115.35 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=62.0
Q ss_pred CcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||++....... .+++.. .+.
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-----RDA 76 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-----CCc
Confidence 5667889999999999998653211 111211 456
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++++|.++++... .....+++.....++.|+++|+.|||
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (260)
T cd08222 77 FCIITEYCEGRDLDCKLEELK--HTGKTLSENQVCEWFIQLLLGVHYMH 123 (260)
T ss_pred eEEEEEeCCCCCHHHHHHHHh--hcccccCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999987432 12356899999999999999999999
No 169
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.13 E-value=5.4e-11 Score=116.75 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=62.9
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
|...+.||+|+||.||++.... +.. .+.+.. ++..+
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 76 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-----CCeEE
Confidence 5667889999999999998642 221 223333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++.....++.|++.|+.|||
T Consensus 77 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH 119 (285)
T cd05605 77 LVLTLMNGGDLKFHIYNMG----NPGFDEERAVFYAAEITCGLEDLH 119 (285)
T ss_pred EEEeccCCCcHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999886533 246899999999999999999999
No 170
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.12 E-value=2.2e-10 Score=113.12 Aligned_cols=81 Identities=21% Similarity=0.223 Sum_probs=66.4
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
....+|...+.||+|+||.||+|... ++.. .+++.. .+.
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 90 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE 90 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCE
Confidence 34467888899999999999999863 2222 345554 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++... .+++.++..++.+++.||.|||
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH 132 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALDFLH 132 (297)
T ss_pred EEEeecccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998643 4788899999999999999999
No 171
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.12 E-value=7.5e-11 Score=115.24 Aligned_cols=73 Identities=22% Similarity=0.261 Sum_probs=58.4
Q ss_pred cccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 403 IGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 403 lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
||+|+||.||++.... +.. .+++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 7999999999998653 222 233333 66789999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+|.+++.... ...+++.....++.|++.|++|||
T Consensus 76 ~g~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH 112 (277)
T cd05607 76 NGGDLKYHIYNVG----ERGLEMERVIHYSAQITCGILHLH 112 (277)
T ss_pred CCCCHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999998886543 345889999999999999999999
No 172
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.12 E-value=1.3e-10 Score=111.96 Aligned_cols=77 Identities=23% Similarity=0.298 Sum_probs=63.3
Q ss_pred CcCCCccccCceecEEEEEeC-CCce----------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILG-EKWT----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~-~~~~----------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||+|+.. ++.. .+++.. ...
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-----EDN 76 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-----CCe
Confidence 567788999999999999875 3222 344444 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++++|.++++... .+++..+..++.++++|++|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH 119 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLH 119 (258)
T ss_pred EEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5889999999999999999999
No 173
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.11 E-value=1.9e-10 Score=112.30 Aligned_cols=77 Identities=17% Similarity=0.254 Sum_probs=62.5
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~~~~ 435 (549)
.|...+.||+|+||.||+|.... +.. .+++.. ...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CCE
Confidence 46677889999999999999743 221 233433 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++++|.++++.. .+++.....++.++++|+.|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh 118 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIH 118 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998642 5889999999999999999999
No 174
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.11 E-value=1.2e-10 Score=117.06 Aligned_cols=79 Identities=14% Similarity=0.186 Sum_probs=65.4
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+..+ +.. ++++.. .+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-----DEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-----CCE
Confidence 367788899999999999999864 222 244444 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .+++.+...++.|++.||.|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH 118 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALH 118 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5788889999999999999999
No 175
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.11 E-value=7.9e-11 Score=115.18 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=68.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+|.... +.. .+++.. ....
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-----ENKL 77 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-----CCeE
Confidence 45678888899999999999999853 222 344544 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... ..+++.....++.|++.||.|||
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh 120 (280)
T cd06611 78 WILIEFCDGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLH 120 (280)
T ss_pred EEEeeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987543 46889999999999999999999
No 176
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.11 E-value=1.1e-10 Score=118.25 Aligned_cols=78 Identities=24% Similarity=0.240 Sum_probs=60.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|+... +.. ++++.. .+
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 145 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NG 145 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CC
Confidence 345677788899999999999998753 221 234443 66
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+.. ...+.....++.|+++||+|||
T Consensus 146 ~~~lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH 185 (353)
T PLN00034 146 EIQVLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLH 185 (353)
T ss_pred eEEEEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999987542 2445667889999999999999
No 177
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.11 E-value=9.8e-11 Score=114.90 Aligned_cols=82 Identities=21% Similarity=0.238 Sum_probs=65.0
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||++.... +.. ++++.. .+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-----EGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-----CCeEE
Confidence 357778899999999999999863 221 233333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|..+++... ....+++.....++.+++.||.|||
T Consensus 76 lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH 119 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGV---ATEGIPEDVLRRITYAVVKGLKFLK 119 (286)
T ss_pred EEEeecCCCCHHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987542 2346899999999999999999999
No 178
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.11 E-value=7.1e-11 Score=124.67 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=65.3
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCcee---------------------------------EEEec-ccc------
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWTA---------------------------------GYSEG-TDF------ 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~~---------------------------------g~~~~-~~~------ 430 (549)
...+.|...+.||+|+||.||+|+.. ++..+ -.+.. ...
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 45678999999999999999999864 33320 00000 000
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
......++||||+++|+|.++++... .....+++.....++.|++.||+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~--~~~~~l~e~~~~~i~~qll~aL~~lH 160 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRA--KTNRTFREHEAGLLFIQVLLAVHHVH 160 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00113679999999999999997543 12346888889999999999999999
No 179
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.10 E-value=1e-10 Score=116.63 Aligned_cols=73 Identities=18% Similarity=0.228 Sum_probs=59.0
Q ss_pred CccccCceecEEEEEeCCCc--e--------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW--T--------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~--~--------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++||+|+||.||+|...+.. + .+++.. .+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 36999999999999875432 1 223333 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH 113 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLH 113 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 5788888899999999999999
No 180
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.10 E-value=7.5e-11 Score=124.30 Aligned_cols=81 Identities=9% Similarity=0.058 Sum_probs=65.0
Q ss_pred CcCCCccccCceecEEEEEeCCC--c-e----------------------------------eEEEeccccCCCceEEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEK--W-T----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~--~-~----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
|...+.||+|+||.||+|..... . + ++++.. .+..++|
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-----~~~~~lv 143 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-----DDKLLLI 143 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-----CCEEEEE
Confidence 77788899999999999986433 1 1 455665 6789999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.++++... ....++++.....++.|++.||+|||
T Consensus 144 ~E~~~gg~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~~lH 186 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRL--KEHLPFQEYEVGLLFYQIVLALDEVH 186 (478)
T ss_pred EECCCCCCHHHHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999886432 11346888888999999999999999
No 181
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.10 E-value=1.8e-11 Score=113.13 Aligned_cols=83 Identities=24% Similarity=0.313 Sum_probs=52.4
Q ss_pred cccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCcccccc-CCccccCCCC
Q 039925 224 TATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGN-LPSSLGYYQN 302 (549)
Q Consensus 224 ~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~ 302 (549)
+|+.|||++|.++. +-.+-.++ .+++.|.|+.|.+.. + ..++.+-+|..||+++|+|... -...++++|.
T Consensus 330 ~L~~LDLS~N~Ls~-~~Gwh~KL--GNIKtL~La~N~iE~-L-----SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPC 400 (490)
T KOG1259|consen 330 QLQLLDLSGNLLAE-CVGWHLKL--GNIKTLKLAQNKIET-L-----SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPC 400 (490)
T ss_pred cceEeecccchhHh-hhhhHhhh--cCEeeeehhhhhHhh-h-----hhhHhhhhheeccccccchhhHHHhcccccccH
Confidence 45555555555542 22233344 667777777777652 1 3466677778888888877622 2346778888
Q ss_pred CCEEEccCCcccc
Q 039925 303 LMELSVSRNKLSA 315 (549)
Q Consensus 303 L~~L~Ls~N~l~~ 315 (549)
|+.+.|.+|.+.+
T Consensus 401 LE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 401 LETLRLTGNPLAG 413 (490)
T ss_pred HHHHhhcCCCccc
Confidence 8888888888775
No 182
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.10 E-value=1.6e-10 Score=111.80 Aligned_cols=79 Identities=22% Similarity=0.337 Sum_probs=65.1
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccCCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~~~ 433 (549)
++|...+.||+|+||.||+|...+ +.. .+++.. .
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-----D 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-----C
Confidence 578999999999999999997643 221 344444 5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... .+++.....++.+++.|+.|||
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH 121 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLH 121 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999987543 5788888999999999999999
No 183
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.10 E-value=1.1e-10 Score=116.44 Aligned_cols=73 Identities=18% Similarity=0.264 Sum_probs=59.8
Q ss_pred CccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|...+.. . .+++.. .+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-----KENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-----CCEEEEEE
Confidence 36999999999999976432 1 233444 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+++.+...++.|+++||+|||
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH 113 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLH 113 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 5888899999999999999999
No 184
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.10 E-value=1e-10 Score=116.75 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=60.2
Q ss_pred CccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|+..+.. . .+++.. .+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-----~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-----KDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 46999999999999875432 1 233444 66789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|..++.... .+++.....++.|+++||.|||
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH 113 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLH 113 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887543 5899999999999999999999
No 185
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.10 E-value=1.4e-10 Score=111.70 Aligned_cols=78 Identities=31% Similarity=0.531 Sum_probs=63.1
Q ss_pred cCCCccccCceecEEEEEeCCCc------e-----------------------------------eEEEeccccCCCceE
Q 039925 398 SSSNMIGQGSFGSVYKGILGEKW------T-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 398 ~~~~~lG~G~~g~Vy~~~~~~~~------~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...+.||+|+||.||++.+.+.. + ++.+.. .+..
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-----EEPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-----CCee
Confidence 45678999999999999986522 1 344444 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ...+++.++..++.|++.|++|||
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lh 120 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNR----PKELSLSDLLSFALQIARGMEYLE 120 (258)
T ss_pred EEEEeccCCCCHHHHHHhhh----hccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998644 122899999999999999999999
No 186
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.09 E-value=1.7e-10 Score=112.92 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=66.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce-----------------------------------eEEEecccc-CCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT-----------------------------------AGYSEGTDF-KGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-----------------------------------~g~~~~~~~-~~~~ 434 (549)
.+.+.|...+.||+|+||.||+|..... .. .+++..... ....
T Consensus 13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 92 (282)
T cd06636 13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD 92 (282)
T ss_pred ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence 4667888889999999999999997532 21 122211000 1135
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... ...+++.....++.|++.|+.|||
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTK----GNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999987543 245778888899999999999999
No 187
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.09 E-value=1.3e-10 Score=116.31 Aligned_cols=73 Identities=21% Similarity=0.165 Sum_probs=59.9
Q ss_pred CccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEEEEEe
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
++||+|+||.||++.... +.. .+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-----CCEEEEEEe
Confidence 369999999999998643 321 234444 678899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.+++.... .+++.+...++.|+++||+|||
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH 112 (323)
T cd05571 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLH 112 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999987543 6889999999999999999999
No 188
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.09 E-value=3.7e-10 Score=110.96 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=64.4
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||.|++|.||+|...+... .+++... .....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence 367778899999999999999854221 3444331 134679
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++..... ....+++.....++.|+++||+|||
T Consensus 78 lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH 122 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLH 122 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988764220 2345788889999999999999999
No 189
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.09 E-value=1.5e-10 Score=111.60 Aligned_cols=81 Identities=17% Similarity=0.204 Sum_probs=62.5
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||++....+. . .+.+.. .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 3667788999999999999865332 1 122211 134578
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.++++... ...+++.+...++.+++.|++|||
T Consensus 77 lv~e~~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~l~~~l~~lH 119 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQK----GKLLPENQVVEWFVQIAMALQYLH 119 (257)
T ss_pred EEecccCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 346899999999999999999999
No 190
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.09 E-value=1.6e-10 Score=113.19 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=64.0
Q ss_pred CcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEEEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
|...+.||+|+||.||+|....... .+++.. .+..++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEEEEE
Confidence 4566789999999999998764322 355555 67889999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|..++.... ..++|..+..++.|+++||.|||
T Consensus 82 e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH 120 (282)
T cd06643 82 EFCAGGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLH 120 (282)
T ss_pred EecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999886532 46899999999999999999999
No 191
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.09 E-value=2.4e-10 Score=111.32 Aligned_cols=77 Identities=26% Similarity=0.240 Sum_probs=63.9
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e------------------------------------eEEEeccccCCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
+|...+.||.|+||.||+|+..+.. . .+++.. ....++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~ 76 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-----GSKLWI 76 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-----CCeEEE
Confidence 5777788999999999999975432 1 334444 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+||+++|+|.++++.. .+++.....++.|++.|+.|||
T Consensus 77 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh 115 (274)
T cd06609 77 IMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLH 115 (274)
T ss_pred EEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998753 5889999999999999999999
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.09 E-value=2.1e-10 Score=111.33 Aligned_cols=77 Identities=22% Similarity=0.349 Sum_probs=62.1
Q ss_pred CcCCCccccCceecEEEEEeCCC-ce--------------------------------------------eEEEeccccC
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEK-WT--------------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~-~~--------------------------------------------~g~~~~~~~~ 431 (549)
|.....||+|+||.||+|..... .. .+++..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 55678899999999999986432 11 234443
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++++|.+++.... .+++.....++.|++.|++|||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH 123 (267)
T cd06628 78 -ADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLH 123 (267)
T ss_pred -CCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999997543 5788889999999999999999
No 193
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.08 E-value=8.4e-11 Score=115.78 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=64.0
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|.... +.. ++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-----QRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-----CCe
Confidence 367888899999999999999753 322 122222 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH 118 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLH 118 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5888889999999999999999
No 194
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.08 E-value=9.3e-11 Score=117.34 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=63.4
Q ss_pred cCcCCCccccCceecEEEEEeCCCc--e--------------------------------------eEEEeccccCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW--T--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~--~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
+|...+.||+|+||.||+|...+.. + .+++.. .+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----MDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-----CCE
Confidence 4677789999999999999876432 1 122333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH 118 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLH 118 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987543 5788999999999999999999
No 195
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.08 E-value=8e-11 Score=115.47 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=63.5
Q ss_pred ccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|.+.+. .. .+++.. .+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-----KKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-----CCeE
Confidence 3577788999999999999998642 22 122332 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++++++.++.+... .++|.....++.|+++||+|||
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH 117 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN------GLDESRVRKYLFQILRGIEFCH 117 (286)
T ss_pred EEEEecCCccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876432 4899999999999999999999
No 196
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.08 E-value=2.1e-10 Score=112.40 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=63.5
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||+|+... +.. .+++.. +...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-----ESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-----CCeEE
Confidence 46677889999999999998753 221 344544 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ |+|.+++.... ....+++.....++.|+++||+|||
T Consensus 76 ~v~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH 118 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLP---KGQYMDAELVKSYLYQILQGILFCH 118 (285)
T ss_pred EEEecCC-CCHHHHHhcCC---CCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9999998 68988886543 2356889999999999999999999
No 197
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.08 E-value=1.2e-10 Score=114.35 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=63.4
Q ss_pred CcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCCceEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
|...+.||+|+||.||++...... . .+.+.. .+..+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-----CCEEE
Confidence 566788999999999999875432 1 233444 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++..+..++.|++.|++|||
T Consensus 77 lv~e~~~g~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~lH 119 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMG----EAGFEEGRAVFYAAEICCGLEDLH 119 (285)
T ss_pred EEEEecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986533 245889999999999999999999
No 198
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.08 E-value=2.5e-10 Score=111.13 Aligned_cols=77 Identities=17% Similarity=0.315 Sum_probs=62.4
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce---------------------------------------------eEEEecccc
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------------------AGYSEGTDF 430 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------------~g~~~~~~~ 430 (549)
|...+.||+|+||.||+|...+ +.. ++++..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 79 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT--- 79 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc---
Confidence 5667889999999999997532 221 334444
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++..+..++.|++.|+.|||
T Consensus 80 --~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH 125 (272)
T cd06629 80 --EEYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLH 125 (272)
T ss_pred --CCceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999997643 5888888999999999999999
No 199
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.08 E-value=1.2e-10 Score=116.61 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=63.9
Q ss_pred cCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~~~~ 435 (549)
+|...+.||+|+||.||+|+..+... .+++.. .+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-----MDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-----CCE
Confidence 57778899999999999998754321 233333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH 118 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLH 118 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987543 5888999999999999999999
No 200
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.08 E-value=1.2e-10 Score=114.19 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=63.1
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
|...+.||+|+||.||+|.... +.. .+++.. .+..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-----CCEEE
Confidence 5566789999999999998743 322 233333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ...+++.....++.|++.|+.|||
T Consensus 77 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH 119 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMG----NPGFEEERALFYAAEILCGLEDLH 119 (285)
T ss_pred EEEEeccCccHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887543 246899999999999999999999
No 201
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.08 E-value=2.1e-10 Score=110.83 Aligned_cols=84 Identities=14% Similarity=0.099 Sum_probs=63.6
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||.|+||.||++.... +.. .+++.. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 46677889999999999998643 221 222221 1145678
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|||+++|+|.+++.... ....++++...+.++.+++.|++|||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCK--KERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred EEehhccCCCHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997542 12357899999999999999999999
No 202
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.08 E-value=1.6e-10 Score=112.18 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=66.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+|+..+ +.. .+++.. .+..
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-----~~~~ 81 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-----RDKL 81 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-----CCEE
Confidence 34678888899999999999998743 221 233333 5778
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++..+ .+++.+...++.|++.|+.|||
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH 123 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLH 123 (267)
T ss_pred EEEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987543 5889999999999999999999
No 203
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.07 E-value=3.4e-10 Score=109.80 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=63.4
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccCCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~~~ 433 (549)
.+|...+.||+|+||.||+|...+ +.. .+.+.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 478889999999999999998643 211 222221 113
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++++||+++++|.+++.... .+++.....++.|+++||+|||
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999997543 5788889999999999999999
No 204
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.07 E-value=4e-10 Score=109.18 Aligned_cols=82 Identities=22% Similarity=0.178 Sum_probs=66.2
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-e------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-T------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||.|+||.||+|...+.. . .+.+.. .+..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEEE
Confidence 46888899999999999999975432 1 233433 67789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++++|.++++... ....+++.....++.|++.|++|||
T Consensus 76 iv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lh 119 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSY---PRGGLDEAIIATVLKEVLKGLEYLH 119 (267)
T ss_pred EEEeccCCCcHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 1246889999999999999999999
No 205
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.07 E-value=1.8e-10 Score=111.49 Aligned_cols=84 Identities=21% Similarity=0.278 Sum_probs=64.4
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------eEEEeccccCCCc-eEEEEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------AGYSEGTDFKGID-FKAVVF 440 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------~g~~~~~~~~~~~-~~~lv~ 440 (549)
.+|...+.||+|+||.||++...+ |.. +.++.. ....+. ..+++|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~-~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGS-SSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCc-cccccCeeeEeee
Confidence 457788899999999999999754 222 111110 001122 689999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++...+ . +++.....++++||.+||+|||
T Consensus 96 Ey~~~GsL~~~~~~~g----~-~l~E~~v~~ytr~iL~GL~ylH 134 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYG----G-KLPEPLVRRYTRQILEGLAYLH 134 (313)
T ss_pred eccCCCcHHHHHHHcC----C-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999764 2 6899999999999999999999
No 206
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.07 E-value=2.7e-10 Score=109.87 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=41.6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.+++.... ...++|.....++.|+++||+|||
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~L~~lH 114 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDA----LGHFLISTLCDYAVQIANGMRYLE 114 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcc----cccCcHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999998643 146899999999999999999999
No 207
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.07 E-value=1.4e-10 Score=115.34 Aligned_cols=71 Identities=20% Similarity=0.212 Sum_probs=59.0
Q ss_pred cccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 403 IGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 403 lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
||+|+||.||+|...+.. . .+++.. .+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-----PEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-----CCeEEEEEcCC
Confidence 799999999999975432 1 234444 67889999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 76 ~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 110 (312)
T cd05585 76 NGGELFHHLQREG------RFDLSRARFYTAELLCALENLH 110 (312)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999997543 5889999999999999999999
No 208
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.07 E-value=1.8e-10 Score=115.08 Aligned_cols=73 Identities=22% Similarity=0.215 Sum_probs=59.7
Q ss_pred CccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++||+|+||.||+|+..+.. . .+++.. ++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-----KDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCeEEEEE
Confidence 46999999999999875432 1 233333 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+++.....++.|+++||.|||
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 113 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLH 113 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 5888899999999999999999
No 209
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.07 E-value=3.5e-10 Score=110.02 Aligned_cols=91 Identities=20% Similarity=0.154 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e-----------------------------------eEEEecccc-CCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T-----------------------------------AGYSEGTDF-KGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-----------------------------------~g~~~~~~~-~~~~ 434 (549)
.++++|...+.||+|+||.||+|...... . .+++..... ....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 46789999999999999999999985432 1 333432110 1134
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++++|.++++... .....+++..+..++.|+++||.|||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~ql~~al~~lH 130 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLR--KKGKRLKEEWIAYILRETLRGLAYLH 130 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5799999999999999987432 01346889999999999999999999
No 210
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.07 E-value=1.5e-10 Score=115.70 Aligned_cols=73 Identities=22% Similarity=0.255 Sum_probs=59.3
Q ss_pred CccccCceecEEEEEeCCC-ce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEK-WT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~-~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|+.... .. ++++.. .+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-----~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-----PDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-----CCEEEEEE
Confidence 3699999999999987542 22 233333 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH 113 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLH 113 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 5888899999999999999999
No 211
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.07 E-value=1.6e-10 Score=104.23 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=68.4
Q ss_pred cccccCcCCCccccCceecEEEEE-eCCCce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGI-LGEKWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|...+.+|+|||.-||.++ ..++.. +.++......+..+
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 566779999999999999999987 222221 01111101123567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++++.|...|+|.+.+...+ ..+..++..+.+.|+.||++||+|||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k--~kg~~~sE~~iL~if~gic~gL~~lH 144 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLK--IKGNFVSEAQILWIFLGICRGLEALH 144 (302)
T ss_pred EEEEeehhccccHHHHHHHHh--hcCCccCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999998655 23457899999999999999999999
No 212
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.06 E-value=7.4e-12 Score=118.23 Aligned_cols=242 Identities=15% Similarity=0.174 Sum_probs=137.5
Q ss_pred ccccCCCCCCEEEccCCcceec----CCccccCCCCCCEeeccccc---ccccCCcc-------cccccCccceeeeccc
Q 039925 51 PHVGNFGYLRFINLVDNNFRGE----IPEKVGRLFRLEYLLLANNH---FSGKIPAN-------LSHCSNLLTKLFICET 116 (549)
Q Consensus 51 ~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~---l~~~~p~~-------l~~l~~L~~~L~Ls~n 116 (549)
+.+-.+..++.++|++|.|... +...+.+.++|+..++|+=- +...+|+. +-.+++| ++|+||.|
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L-~~ldLSDN 102 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKL-QKLDLSDN 102 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCce-eEeecccc
Confidence 3455677888999999988632 44556677788888887532 22344543 3345566 77777777
Q ss_pred ccccccccc----cCCCCCCCEEEeecceeeee-------------CCccccCCCCCCEEecccCcceec----cccccc
Q 039925 117 HLSGQLLDF----IGNPSAIQVMIFKENSLEGK-------------FPNTLSNLRSLFYDNINRNEFSGL----IPSFIF 175 (549)
Q Consensus 117 ~l~~~~~~~----~~~l~~L~~L~L~~n~l~~~-------------~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~ 175 (549)
-+...-+.. +.++..|++|.|.+|.+... ...-..+-++|+.+....|++... +...|.
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~ 182 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQ 182 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHH
Confidence 665443332 34456677777777766511 011123345566666666665422 223344
Q ss_pred ccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccc----cChhhhhccccC
Q 039925 176 NIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGT----ITLGIKKLIFVN 250 (549)
Q Consensus 176 ~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~~~ 250 (549)
..+ |+.+.++.|.+...--..+. ..+..+++|+.|||..|.++.. +...++.+ ++
T Consensus 183 ~~~~leevr~~qN~I~~eG~~al~------------------eal~~~~~LevLdl~DNtft~egs~~LakaL~s~--~~ 242 (382)
T KOG1909|consen 183 SHPTLEEVRLSQNGIRPEGVTALA------------------EALEHCPHLEVLDLRDNTFTLEGSVALAKALSSW--PH 242 (382)
T ss_pred hccccceEEEecccccCchhHHHH------------------HHHHhCCcceeeecccchhhhHHHHHHHHHhccc--ch
Confidence 444 66666666655421111111 1123345777777777777632 23445555 77
Q ss_pred ccEEEcCCCcccccCCCcCcccc-CCccccCeeeccCcccccc----CCccccCCCCCCEEEccCCcc
Q 039925 251 LYALTMVKNKLSGPIPHHIASSL-GNLTLLTYLALDNNKLQGN----LPSSLGYYQNLMELSVSRNKL 313 (549)
Q Consensus 251 L~~L~L~~n~l~~~~p~~l~~~l-~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l 313 (549)
|+.|++++|.+.......+...+ ...++|+.|.+.+|.|+.. +...+...+.|..|+|++|.+
T Consensus 243 L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 243 LRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred heeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 77888887777644322222222 2357778888888877622 223445567777788887777
No 213
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.06 E-value=1.3e-10 Score=116.43 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=66.0
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-ce--------------------------------------eEEEeccccCCCc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-WT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
.++|...+.||+|+||.||+|+.... .. ++++.. .+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-----EN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-----CC
Confidence 35788888999999999999998543 21 344544 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 135 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLH 135 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998643 5778888889999999999999
No 214
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.06 E-value=1.4e-10 Score=115.78 Aligned_cols=73 Identities=16% Similarity=0.107 Sum_probs=59.5
Q ss_pred CccccCceecEEEEEeC----CCce-------------------------------------eEEEeccccCCCceEEEE
Q 039925 401 NMIGQGSFGSVYKGILG----EKWT-------------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~----~~~~-------------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
+.||+|+||.||++... .+.. ++++.. ....++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-----EGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCEEEEE
Confidence 46999999999998752 2221 344554 6788999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 77 ~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH 115 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLH 115 (318)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543 5889999999999999999999
No 215
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.06 E-value=5.6e-10 Score=111.86 Aligned_cols=76 Identities=17% Similarity=0.081 Sum_probs=61.5
Q ss_pred CCccccC--ceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEEE
Q 039925 400 SNMIGQG--SFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 400 ~~~lG~G--~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.++||+| +||.||++.... +.. ++++.. ++..++|
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-----~~~~~lv 77 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----DNELWVV 77 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----CCEEEEE
Confidence 4679999 789999998753 222 455655 6788999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||
T Consensus 78 ~e~~~~~~l~~~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH 118 (327)
T cd08227 78 TSFMAYGSAKDLICTHF----MDGMSELAIAYILQGVLKALDYIH 118 (327)
T ss_pred EeccCCCcHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543 235889999999999999999999
No 216
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.06 E-value=1.7e-10 Score=115.34 Aligned_cols=73 Identities=21% Similarity=0.194 Sum_probs=59.7
Q ss_pred CccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEEEEEe
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
++||+|+||.||++.... +.. .+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCEEEEEEe
Confidence 369999999999998643 221 244444 678899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 112 (323)
T cd05595 76 YANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLH 112 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999887543 5889999999999999999999
No 217
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.05 E-value=2.3e-10 Score=112.07 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=64.0
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|+... +.. .+++.. ....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-----~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-----EGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-----CCcE
Confidence 467888899999999999998753 322 344444 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++ |+|.++++... .....+++.....++.|++.||+|||
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH 120 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVY--DKGLTIPEDILGKIAVSIVKALEYLH 120 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999997 78888876432 12346899999999999999999999
No 218
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.05 E-value=2.1e-10 Score=115.03 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=59.9
Q ss_pred CccccCceecEEEEEeCCC-ce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEK-WT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~-~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++||+|+||.||+|..... .. .+++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-----CCEEEEEE
Confidence 4699999999999987532 21 344444 66789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++...+ .+++..+..++.|++.||+|||
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH 113 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLH 113 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887543 6899999999999999999999
No 219
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=5.2e-10 Score=107.98 Aligned_cols=80 Identities=20% Similarity=0.202 Sum_probs=63.4
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCce------------------------------------------eEEEecccc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKWT------------------------------------------AGYSEGTDF 430 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~------------------------------------------~g~~~~~~~ 430 (549)
.+.|-..+.||+|+||.|-+|.-+ +++. ++.+..
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~--- 247 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV--- 247 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec---
Confidence 344567889999999999999753 3332 233443
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++..|+|||||++|+|.+.+-..+ .+.......++.|+..|+.|||
T Consensus 248 --~ds~YmVlE~v~GGeLfd~vv~nk------~l~ed~~K~~f~Qll~avkYLH 293 (475)
T KOG0615|consen 248 --PDSSYMVLEYVEGGELFDKVVANK------YLREDLGKLLFKQLLTAVKYLH 293 (475)
T ss_pred --CCceEEEEEEecCccHHHHHHhcc------ccccchhHHHHHHHHHHHHHHH
Confidence 677899999999999999998654 5667777789999999999999
No 220
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.05 E-value=3.6e-10 Score=110.62 Aligned_cols=50 Identities=18% Similarity=0.144 Sum_probs=41.6
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .....+++..+..++.|++.||+|||
T Consensus 65 ~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH 114 (280)
T cd05608 65 KTDLCLVMTIMNGGDLRYHIYNVD--EENPGFPEPRACFYTAQIISGLEHLH 114 (280)
T ss_pred CCeEEEEEeCCCCCCHHHHHHhcc--ccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999998875422 12346899999999999999999999
No 221
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.05 E-value=2.2e-10 Score=114.89 Aligned_cols=73 Identities=18% Similarity=0.182 Sum_probs=59.7
Q ss_pred CccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|+..... . ++++.. .+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-----CCEEEEEE
Confidence 46999999999999875432 1 344444 67789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|..++.... .+++.....++.|++.||+|||
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH 113 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLH 113 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887543 5889999999999999999999
No 222
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.05 E-value=2.3e-10 Score=114.11 Aligned_cols=73 Identities=16% Similarity=0.253 Sum_probs=59.3
Q ss_pred CccccCceecEEEEEeCCC-ce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEK-WT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~-~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++||+|+||.||+|+..+. .. ++++.. .+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 4699999999999997543 21 233333 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH 113 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLH 113 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 5788888999999999999999
No 223
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.05 E-value=1.9e-10 Score=115.85 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=68.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc---e-------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW---T-------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~---~-------------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+|+||.||+|.+.+.. + ++++..
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~---- 102 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD---- 102 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe----
Confidence 34567888899999999999999864322 1 455555
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++..++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 103 -~~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH 148 (340)
T PTZ00426 103 -ESYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQ 148 (340)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998643 5888889999999999999999
No 224
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.05 E-value=5.6e-10 Score=110.23 Aligned_cols=77 Identities=21% Similarity=0.274 Sum_probs=61.8
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||+|.... +.. ++++.. ...
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KSN 76 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CCE
Confidence 5667789999999999998753 222 222333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+ +|+|.++++... ..+++..+..++.|+++||.|||
T Consensus 77 ~~lv~e~~-~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH 119 (298)
T cd07841 77 INLVFEFM-ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLH 119 (298)
T ss_pred EEEEEccc-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999 999999997532 36899999999999999999999
No 225
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=9.4e-11 Score=103.99 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=29.2
Q ss_pred ccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccc-cCCCCCCEEecccCcceecc-cccccccc-cc
Q 039925 104 CSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTL-SNLRSLFYDNINRNEFSGLI-PSFIFNIS-LK 180 (549)
Q Consensus 104 l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~-p~~~~~l~-L~ 180 (549)
+.+| +.|++++|.|+.. +.+..+++|++|++++|+|+ .+.+.+ ..+++|++|++++|++...- -..+..++ |+
T Consensus 41 l~~L-~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~ 116 (175)
T PF14580_consen 41 LDKL-EVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLR 116 (175)
T ss_dssp -TT---EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--
T ss_pred hcCC-CEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcc
Confidence 3444 4444444444422 12334444555555555554 222222 23455555555555544211 12333444 55
Q ss_pred eeeCCCCcCcccC--chhhhhcCCCCcEeeec
Q 039925 181 WNFLPENSFTGNL--PLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 181 ~L~l~~n~l~~~~--p~~~~~~l~~L~~L~l~ 210 (549)
.|++.+|+++..- -..+...+|+|+.||-.
T Consensus 117 ~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 117 VLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred eeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 5555555554221 11122367777777654
No 226
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.04 E-value=3.2e-10 Score=109.04 Aligned_cols=82 Identities=20% Similarity=0.225 Sum_probs=64.6
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||++.... +.. .+.+.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-----~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-----KGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-----CCEEE
Confidence 46677889999999999999763 221 222333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+||+++++|.++++... .....+++.....++.+++.|++|||
T Consensus 76 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQK--KEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred EEEEecCCCcHHHHHHHhh--ccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997642 01357899999999999999999999
No 227
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.04 E-value=3.5e-10 Score=111.01 Aligned_cols=84 Identities=24% Similarity=0.206 Sum_probs=70.0
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cc-e---------------------------------eEEEeccccCCCce
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KW-T---------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-~---------------------------------~g~~~~~~~~~~~~ 435 (549)
...++.|...+.||+|+||.||+|.... +. + .+++.. ...
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 89 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV-----GDE 89 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCE
Confidence 3677888889999999999999999862 22 1 344544 578
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|+||+++++|.+++.... ..+++..+..++.+++.||+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH 133 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLH 133 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998642 36899999999999999999999
No 228
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.04 E-value=6.5e-10 Score=109.30 Aligned_cols=84 Identities=12% Similarity=0.197 Sum_probs=62.0
Q ss_pred cCcCCCccccCceecEEEEEeC-C-Cce----------------------------------------eEEEeccccCCC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILG-E-KWT----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~-~-~~~----------------------------------------~g~~~~~~~~~~ 433 (549)
.|...+.||+|+||.||+|+.. . +.. +++|........
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 5777889999999999999863 2 221 233321111124
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||++ |+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH 127 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLH 127 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999997 69999987543 245889999999999999999999
No 229
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.04 E-value=4.7e-10 Score=108.83 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=63.4
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-----------------------------------------eEEEeccccCCC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------------~g~~~~~~~~~~ 433 (549)
+|...+.||+|+||.||+|.... +.. ++++.. .
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-----D 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-----C
Confidence 47788999999999999997532 211 334443 5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.++++... ++++.....++.|++.|+.|||
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH 120 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLH 120 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999997543 5888999999999999999999
No 230
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.04 E-value=4.5e-10 Score=109.87 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=41.3
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++..++||||+++|+|.+++...+ .++|.....++.|++.|++|||
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH 114 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMH 114 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999987543 5899999999999999999999
No 231
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.04 E-value=4.2e-10 Score=110.80 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=65.8
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
-+.|...+.||+|+||.||+|.... +.. .+.+.. ....+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-----DGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-----CCeEE
Confidence 3567788899999999999998754 222 344444 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|..++.... ..+++..+..++.|+++|++|||
T Consensus 86 lv~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH 127 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELD-----RGLTEPQIQVICRQMLEALQYLH 127 (292)
T ss_pred EEEecCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998876533 35899999999999999999999
No 232
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=9e-11 Score=115.13 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=63.4
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccccCCCc-
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTDFKGID- 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~~~~~~- 434 (549)
.+.|...+.||.|.||.||+|+-. .+.+ ..+.-+ .+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d-----~~~ 83 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD-----NDR 83 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc-----cCc
Confidence 456777788999999999999853 3333 011111 33
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++|||||.. +|+..++.+. ..|+......|+.||.+||+|+|
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiH 127 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIH 127 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999986 9999998754 68999999999999999999999
No 233
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.04 E-value=4.1e-10 Score=109.03 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=65.2
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||++.... +.. .+.+.. ....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-----NGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-----CCEEE
Confidence 367777899999999999998763 222 344444 57789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+||+++++|.+++.... ..++.....+++.|+++|++|||
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH 117 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLH 117 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999998642 46788888999999999999999
No 234
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.03 E-value=3.4e-10 Score=113.42 Aligned_cols=73 Identities=21% Similarity=0.199 Sum_probs=59.5
Q ss_pred CccccCceecEEEEEeCCC-ce--------------------------------------eEEEeccccCCCceEEEEEe
Q 039925 401 NMIGQGSFGSVYKGILGEK-WT--------------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~-~~--------------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
++||+|+||.||++..... .. .+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-----KDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCEEEEEEe
Confidence 3699999999999986432 21 234444 678899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 76 y~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH 112 (328)
T cd05593 76 YVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLH 112 (328)
T ss_pred CCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999987543 5889999999999999999999
No 235
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.03 E-value=6.3e-10 Score=109.67 Aligned_cols=81 Identities=22% Similarity=0.232 Sum_probs=65.4
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCc-e----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKW-T----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~-~----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|...+.||+|+||.||+|... ++. + .+++.. .+.
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~ 90 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GDE 90 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-----CCc
Confidence 34567888889999999999999853 222 1 234444 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|+||+++|+|.+++... .+++..+..++.+++.|+.|||
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH 132 (293)
T cd06647 91 LWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLH 132 (293)
T ss_pred EEEEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998753 3788899999999999999999
No 236
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.03 E-value=6.4e-10 Score=107.47 Aligned_cols=81 Identities=22% Similarity=0.268 Sum_probs=66.3
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-e-----------------------------------eEEEeccccCCCceEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-T-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
.++|...+.||.|+||.||+|...... . .|++.. ....+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCEEE
Confidence 467888889999999999999875322 1 344444 67789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|||+++++|.+++.... ..+++.....++.|++.|++|||
T Consensus 77 l~~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh 118 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLH 118 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987642 35888999999999999999999
No 237
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=6.6e-10 Score=113.53 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=62.1
Q ss_pred CccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEEEEEeecC
Q 039925 401 NMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKAVVFDYMQ 444 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey~~ 444 (549)
-+||+|.||+||-|+..+..+ +|.|.. .++.-+.||-+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-----nGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-----NGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-----CCeEEEEeecCC
Confidence 379999999999999877665 577777 789999999999
Q ss_pred CCCcccccccCCCCCCCCCC--chhhhHHHHHHHHHHHHHhh
Q 039925 445 NRSLEDWPYQSNNKLKPSSL--SMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 445 ~GsL~~~l~~~~~~~~~~~l--~~~~~~~ia~~va~gl~yLH 484 (549)
||+|.++|+.+- +++ .....--+..||.+||.|||
T Consensus 656 GGSLSsLLrskW-----GPlKDNEstm~fYtkQILeGLkYLH 692 (1226)
T KOG4279|consen 656 GGSLSSLLRSKW-----GPLKDNESTMNFYTKQILEGLKYLH 692 (1226)
T ss_pred CCcHHHHHHhcc-----CCCccchhHHHHHHHHHHHHhhhhh
Confidence 999999999766 344 44555668899999999999
No 238
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.03 E-value=5.2e-10 Score=108.16 Aligned_cols=79 Identities=22% Similarity=0.253 Sum_probs=65.7
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|++|.||+|+..+ +.. .+++.. ....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-----EGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-----CCeEE
Confidence 367888999999999999998764 221 344444 57889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++++|.+++... ..+++..+..++.|+++|++|||
T Consensus 76 lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh 116 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLH 116 (264)
T ss_pred EEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999754 36889999999999999999999
No 239
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.02 E-value=3.1e-10 Score=113.53 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=61.4
Q ss_pred CcCCCccccCceecEEEEEeCCC-ce-----------------------------------------eEEEeccccCCCc
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEK-WT-----------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~-~~-----------------------------------------~g~~~~~~~~~~~ 434 (549)
|...+.||+|+||.||+|..... .. ++++.. .+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-----~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-----ED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-----CC
Confidence 44567899999999999987532 21 233443 56
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|..+++.. .+++.....++.|++.||.|||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH 118 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLH 118 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999888643 4899999999999999999999
No 240
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=2.3e-11 Score=112.37 Aligned_cols=133 Identities=23% Similarity=0.279 Sum_probs=109.8
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
.+.....|+.+|||+|.|+ .+-+++.-++.++.|++|+|.|. .+. .+..+++| +.||||+|.++ .+..+-.++.+
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L-~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQL-QLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccc-eEeecccchhH-hhhhhHhhhcC
Confidence 3445678999999999999 77788888999999999999998 443 38889999 99999999987 44455567889
Q ss_pred CCEEEeecceeeeeCCccccCCCCCCEEecccCcceecc-cccccccc-cceeeCCCCcCcc
Q 039925 132 IQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLI-PSFIFNIS-LKWNFLPENSFTG 191 (549)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~-L~~L~l~~n~l~~ 191 (549)
++.|.|+.|.|.. + ..+.++-+|..||+++|+|...- -..+++++ |+++.|.+|.+.+
T Consensus 354 IKtL~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 354 IKTLKLAQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred EeeeehhhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 9999999999872 2 45778889999999999987432 35788999 9999999999984
No 241
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.02 E-value=5.4e-10 Score=109.71 Aligned_cols=79 Identities=20% Similarity=0.240 Sum_probs=61.2
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|+..+... .+++.. .+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-----RGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-----CCEE
Confidence 357778899999999999999864322 123333 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|.+..+.... ..+++.....++.|++.||+|||
T Consensus 76 ~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH 117 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP------NGVPPEKVRSYIYQLIKAIHWCH 117 (287)
T ss_pred EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999998776554322 35888889999999999999999
No 242
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=2.8e-11 Score=117.41 Aligned_cols=207 Identities=19% Similarity=0.128 Sum_probs=130.5
Q ss_pred cCCCCCCEEEccCCcceecCC--ccccCCCCCCEeecccccccccC--CcccccccCccceeeeccccccccccc-ccCC
Q 039925 54 GNFGYLRFINLVDNNFRGEIP--EKVGRLFRLEYLLLANNHFSGKI--PANLSHCSNLLTKLFICETHLSGQLLD-FIGN 128 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~n~l~~~~--p~~l~~l~~L~~~L~Ls~n~l~~~~~~-~~~~ 128 (549)
+++++|+...|.++.+. ..+ .....|++++.||||+|-+.... -.-...+++| +.|+|+.|++.--... .-..
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~L-e~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSL-ENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccc-hhcccccccccCCccccchhh
Confidence 45777888888887766 333 35667888888888888776322 2334677888 8888888887532211 1224
Q ss_pred CCCCCEEEeecceeeee-CCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCch--hhhhcCCCC
Q 039925 129 PSAIQVMIFKENSLEGK-FPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPL--EIGVTLPKG 204 (549)
Q Consensus 129 l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~--~~~~~l~~L 204 (549)
+++|+.|.|+.|.++.. +-..+..+++|+.|+|..|............+. |+.|+|++|++- ..+. ..+ .+
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~-~l--- 270 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVG-TL--- 270 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccc-cc---
Confidence 67888888888888621 222345578888888888853333334445556 888888888876 3331 111 33
Q ss_pred cEeeecccccccccccCcccccEEEccccccccc-cChh-----hhhccccCccEEEcCCCcccccCCCcCccccCCccc
Q 039925 205 RNYYILLLAQKLYWSDVSTTATIIAMGGNQISGT-ITLG-----IKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTL 278 (549)
Q Consensus 205 ~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~-~~~~-----~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~ 278 (549)
+.|..|+++.+.+... .|+. ...+ ++|+.|++..|++... +. -..+..+++
T Consensus 271 ------------------~~L~~Lnls~tgi~si~~~d~~s~~kt~~f--~kL~~L~i~~N~I~~w-~s--l~~l~~l~n 327 (505)
T KOG3207|consen 271 ------------------PGLNQLNLSSTGIASIAEPDVESLDKTHTF--PKLEYLNISENNIRDW-RS--LNHLRTLEN 327 (505)
T ss_pred ------------------cchhhhhccccCcchhcCCCccchhhhccc--ccceeeecccCccccc-cc--cchhhccch
Confidence 3555666666666532 1211 1233 8889999999888521 10 234556777
Q ss_pred cCeeeccCcccc
Q 039925 279 LTYLALDNNKLQ 290 (549)
Q Consensus 279 L~~L~Ls~N~l~ 290 (549)
|+.|.+..|.++
T Consensus 328 lk~l~~~~n~ln 339 (505)
T KOG3207|consen 328 LKHLRITLNYLN 339 (505)
T ss_pred hhhhhccccccc
Confidence 888888888877
No 243
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.02 E-value=3.5e-10 Score=112.15 Aligned_cols=79 Identities=19% Similarity=0.242 Sum_probs=64.7
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc--e-------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW--T-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~--~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||++...... + ++.+.. ++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-----KRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-----CCE
Confidence 36778889999999999999875432 1 334444 677
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.++++|++|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH 118 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLH 118 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5889888999999999999999
No 244
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.02 E-value=2.7e-10 Score=113.97 Aligned_cols=78 Identities=17% Similarity=0.216 Sum_probs=63.2
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~~~~ 435 (549)
+|...+.||+|+||.||+|.... +.. .+++.. .+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-----VDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-----CCE
Confidence 46677899999999999998753 322 122333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.+...++.|++.||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH 118 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLH 118 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987543 5889999999999999999999
No 245
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=2.4e-10 Score=101.42 Aligned_cols=127 Identities=24% Similarity=0.216 Sum_probs=50.6
Q ss_pred ccCCCCCCEEEccCCcceecCCcccc-CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVG-RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
+.+..+++.|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+ .++ .+..++.| +.|++++|.|+...+.....+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L-~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRL-KTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT---EEE--SS---S-CHHHHHH-TT
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhh-hhcccCCCCCCccccchHHhCCc
Confidence 445567899999999999 453 455 5889999999999999 454 58889999 99999999998643332346899
Q ss_pred CCEEEeecceeeee-CCccccCCCCCCEEecccCcceecc---cccccccc-cceeeC
Q 039925 132 IQVMIFKENSLEGK-FPNTLSNLRSLFYDNINRNEFSGLI---PSFIFNIS-LKWNFL 184 (549)
Q Consensus 132 L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~---p~~~~~l~-L~~L~l 184 (549)
|++|++++|+|... --..+..+++|+.|+|.+|.+.... ...+..++ |+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 99999999999742 1245678999999999999987431 12455677 888874
No 246
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.01 E-value=3.5e-10 Score=108.87 Aligned_cols=82 Identities=18% Similarity=0.163 Sum_probs=63.3
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||++.... +.. .+++.. ....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-----GNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-----CCEEE
Confidence 36677889999999999998643 222 122222 46789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++++|.+++.... .....+++.....++.++++|++|||
T Consensus 76 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRK--KKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred EEehhcCCCCHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999987632 12346899999999999999999999
No 247
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.01 E-value=3.6e-10 Score=113.12 Aligned_cols=73 Identities=21% Similarity=0.191 Sum_probs=59.3
Q ss_pred CccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEEEEEe
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
+.||+|+||.||++.... +.. .+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-----~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-----CCEEEEEEe
Confidence 369999999999998643 221 233444 678899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 ~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH 112 (325)
T cd05594 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLH 112 (325)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999887543 5889999999999999999999
No 248
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.01 E-value=3.4e-10 Score=111.25 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=60.7
Q ss_pred cCcCCCccccCceecEEEEEeCCC----c-e---------------------------------------eEEEeccccC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEK----W-T---------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~----~-~---------------------------------------~g~~~~~~~~ 431 (549)
+|...+.||+|+||.||++...+. . + .+.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 356678899999999999875321 1 1 122222
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 77 -~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH 122 (288)
T cd05583 77 -DTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLH 122 (288)
T ss_pred -CCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999987533 5888888999999999999999
No 249
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.01 E-value=2.4e-10 Score=110.29 Aligned_cols=76 Identities=24% Similarity=0.382 Sum_probs=64.0
Q ss_pred cCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCceEEEE
Q 039925 398 SSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 398 ~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
...+.||+|+||.||++...+... .++... ....++|
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~v 76 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYIV 76 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEEE
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----ccccccc
Confidence 456789999999999999876542 355555 6788999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++... ..+++..+..++.|+++||+|||
T Consensus 77 ~~~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~Lh 115 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQKN------KPLSEEEILKIAYQILEALAYLH 115 (260)
T ss_dssp EEEETTEBHHHHHHHH------SSBBHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccc------ccccccccccccccccccccccc
Confidence 9999999999999833 36899999999999999999999
No 250
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.01 E-value=9.9e-10 Score=107.67 Aligned_cols=79 Identities=16% Similarity=0.221 Sum_probs=63.6
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|.....||+|+||.||+|+... +.. .+++.. ....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-----KRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-----CCEE
Confidence 357777889999999999998753 221 334444 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++++.+..++... ..++|..+..++.|++.||+|||
T Consensus 76 ~~v~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~ql~~~l~~LH 117 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNP------RGVPEHLIKKIIWQTLQAVNFCH 117 (286)
T ss_pred EEEEeccCccHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887643 25899999999999999999999
No 251
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.00 E-value=4.1e-10 Score=111.17 Aligned_cols=80 Identities=21% Similarity=0.245 Sum_probs=65.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...+|...+.||.|+||.||+|+... +.. .+.+.. .+..
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~ 91 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-----GDEL 91 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-----CceE
Confidence 44568888899999999999998532 221 344544 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+||+++|+|.+++... .++|.++..++.+++.|++|||
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH 132 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTET-------CMDEAQIAAVCRECLQALEFLH 132 (296)
T ss_pred EEEEEecCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 4889999999999999999999
No 252
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.00 E-value=3.7e-10 Score=113.43 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=61.9
Q ss_pred cCcCCCccccCceecEEEEEeCC----Cce----------------------------------------eEEEeccccC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE----KWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~----~~~----------------------------------------~g~~~~~~~~ 431 (549)
+|...+.||+|+||.||+++... +.. .+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 46777899999999999987632 111 122333
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 77 -~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 122 (332)
T cd05614 77 -EAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLH 122 (332)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999997543 5888889999999999999999
No 253
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.00 E-value=3.8e-10 Score=113.28 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=65.4
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||++.... +.. .+++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 467888899999999999998753 221 233444 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ..+++.....++.|+++||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH 119 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVH 119 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998653 36889989999999999999999
No 254
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.00 E-value=1.3e-09 Score=104.81 Aligned_cols=78 Identities=22% Similarity=0.334 Sum_probs=63.9
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCC--ce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGI--DF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~--~~ 435 (549)
+|...+.||+|++|.||+|.... +.. .+.+.. . ..
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERD-----EEKNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEec-----CCCCe
Confidence 46777899999999999999763 221 233333 3 67
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|+||+++++|.+++.... .++|..+..++.++++|++|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh 118 (260)
T cd06606 76 LNIFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLH 118 (260)
T ss_pred EEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987542 6899999999999999999999
No 255
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.99 E-value=9.6e-11 Score=108.24 Aligned_cols=82 Identities=24% Similarity=0.256 Sum_probs=66.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..+-|+....||+|+||.|||+..+. |.+ +|.+.. ....++
T Consensus 31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDLWI 105 (502)
T KOG0574|consen 31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDLWI 105 (502)
T ss_pred hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCceEe
Confidence 44456777789999999999998653 443 333333 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||||..|+..+.++.+. ++++......+.++..+||+|||
T Consensus 106 VMEYCGAGSiSDI~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH 146 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARR-----KPLSEQEISAVLRDTLKGLQYLH 146 (502)
T ss_pred ehhhcCCCcHHHHHHHhc-----CCccHHHHHHHHHHHHhHHHHHH
Confidence 999999999999998754 68999999999999999999999
No 256
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=4.2e-11 Score=109.85 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=65.9
Q ss_pred ccccCcCCCccccCceecEEEEEe-CCCce----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGIL-GEKWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...+|...+.||+|+||.|||+.. .+|.. +.||...-.+..+..+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 344677888999999999999984 44433 1112100001134478
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+..|+|...++.-+ .....++.+..+++..|.++||.++|
T Consensus 97 ivmE~c~~GDLsqmIk~~K--~qkr~ipE~~Vwk~f~QL~~AL~~cH 141 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFK--KQKRLIPEKTVWKYFVQLCRALYHCH 141 (375)
T ss_pred HHHHhhcccCHHHHHHHHH--hccccCchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997544 13467899999999999999999999
No 257
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.99 E-value=5.8e-10 Score=109.19 Aligned_cols=78 Identities=21% Similarity=0.222 Sum_probs=61.2
Q ss_pred CcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|...+.. . .+++.. .+..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 455678999999999999986432 1 011211 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+ +|+|.++++... ...++|..+..++.|+++||.|||
T Consensus 76 v~e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh 116 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIH 116 (283)
T ss_pred EEecC-CCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999 889999987643 246899999999999999999999
No 258
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.99 E-value=1.2e-09 Score=106.91 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=63.4
Q ss_pred cCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
+|...+.||+|++|.||+|+.... .. .+++.. .+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcEEE
Confidence 467778999999999999997532 21 344444 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++ +|.+++.... ....+++..+..++.|+++||.|||
T Consensus 76 v~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH 117 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHG---VRGALDPNTVKSFTYQLLKGIAFCH 117 (284)
T ss_pred EEecCCc-cHHHHHHhcC---CCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 9999984 8988887543 2346899999999999999999999
No 259
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.99 E-value=1.4e-09 Score=106.38 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=60.2
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|.... +.. .+++... ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 3445679999999999998643 221 3444441 0267899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++ |++.+++.... ..++|..+..++.|++.||+|||
T Consensus 78 v~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH 117 (282)
T cd07831 78 VFELMD-MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMH 117 (282)
T ss_pred EEecCC-ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999997 68888887543 46899999999999999999999
No 260
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.99 E-value=6.2e-10 Score=112.92 Aligned_cols=82 Identities=12% Similarity=0.144 Sum_probs=66.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce------------------------------eEEEeccccCCCceEEEEEe
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
....+|...+.||+|+||.||+|+..+... ++++.. ....++|+|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e 137 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVS-----GAITCMVLP 137 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEe-----CCeeEEEEE
Confidence 345679999999999999999999864321 345555 567899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+. |+|.+++.... ..++|..+..++.|+++||.|||
T Consensus 138 ~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 174 (357)
T PHA03209 138 HYS-SDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLH 174 (357)
T ss_pred ccC-CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 985 68999887543 46899999999999999999999
No 261
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.98 E-value=1e-09 Score=107.22 Aligned_cols=74 Identities=18% Similarity=0.238 Sum_probs=58.8
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
+|...+.||+|+||.||+|+... +.. ++++.. .+..++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 76 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRISI 76 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEEE
Confidence 56777889999999999998632 221 455555 667889
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|..+. .+++.....++.|++.||.|||
T Consensus 77 v~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH 112 (279)
T cd06619 77 CTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLW 112 (279)
T ss_pred EEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999996552 2567778899999999999999
No 262
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.98 E-value=1e-09 Score=106.09 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=62.8
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|.... +.. .+.+.. .+..++
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l 76 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-----REKVYI 76 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-----CCEEEE
Confidence 5667889999999999998643 221 344444 577899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+||+++++|.++++... .+++..+..++.++++|++|||
T Consensus 77 v~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh 116 (264)
T cd06626 77 FMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLH 116 (264)
T ss_pred EEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999998543 4788889999999999999999
No 263
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.98 E-value=6e-10 Score=111.65 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=59.6
Q ss_pred CccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|....+.. .+++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-----TSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-----CCEEEEEE
Confidence 469999999999998754321 233333 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+++..+..++.|+++|++|||
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH 113 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLH 113 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887543 5899999999999999999999
No 264
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.98 E-value=8.5e-10 Score=109.51 Aligned_cols=82 Identities=21% Similarity=0.210 Sum_probs=64.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
.....|...+.||+|+||.||+|.... +.. .++|..
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----- 86 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR----- 86 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----
Confidence 455668888999999999999998643 221 355555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||++ |++.+++.... ..+++..+..++.|++.||.|||
T Consensus 87 ~~~~~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH 132 (307)
T cd06607 87 EHTAWLVMEYCL-GSASDILEVHK-----KPLQEVEIAAICHGALQGLAYLH 132 (307)
T ss_pred CCeEEEEHHhhC-CCHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 667899999997 67777765433 35899999999999999999999
No 265
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=7.1e-11 Score=114.70 Aligned_cols=206 Identities=16% Similarity=0.165 Sum_probs=103.5
Q ss_pred cCCCCCCEeecccccccccCC--cccccccCccceeeecccccccc--cccccCCCCCCCEEEeecceeeeeCCcc-ccC
Q 039925 78 GRLFRLEYLLLANNHFSGKIP--ANLSHCSNLLTKLFICETHLSGQ--LLDFIGNPSAIQVMIFKENSLEGKFPNT-LSN 152 (549)
Q Consensus 78 ~~l~~L~~L~Ls~n~l~~~~p--~~l~~l~~L~~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~ 152 (549)
.++.+|+.+.|.++.+. ..+ .....|+++ +.||||+|-+..- +......+++|+.|+|+.|++..-.... -..
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v-~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNV-RDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcc-eeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 35667777777777766 233 244566676 7777777766532 2234455666777777766665111110 113
Q ss_pred CCCCCEEecccCcceec-ccccccccc-cceeeCCCCcCcc--cCchhhhhcCCCCcEeeecccccccccccCcccccEE
Q 039925 153 LRSLFYDNINRNEFSGL-IPSFIFNIS-LKWNFLPENSFTG--NLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATII 228 (549)
Q Consensus 153 l~~L~~L~L~~n~l~~~-~p~~~~~l~-L~~L~l~~n~l~~--~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L 228 (549)
++.|+.|.|+.|.++.. +-......+ |+.|+|..|.... ..+. ..+..|+.|
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~------------------------~i~~~L~~L 251 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATST------------------------KILQTLQEL 251 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchh------------------------hhhhHHhhc
Confidence 45555566665555421 111122333 5555555553110 0111 122356666
Q ss_pred Ecccccccccc-ChhhhhccccCccEEEcCCCcccccCCCcCccc-----cCCccccCeeeccCccccc-cCCccccCCC
Q 039925 229 AMGGNQISGTI-TLGIKKLIFVNLYALTMVKNKLSGPIPHHIASS-----LGNLTLLTYLALDNNKLQG-NLPSSLGYYQ 301 (549)
Q Consensus 229 ~l~~n~l~~~~-~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~-----l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~ 301 (549)
+|++|++-... -.....+ +.|..|+++.+.+.. + .+|+. ...+++|++|+++.|++.. ..-..+..++
T Consensus 252 dLs~N~li~~~~~~~~~~l--~~L~~Lnls~tgi~s-i--~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~ 326 (505)
T KOG3207|consen 252 DLSNNNLIDFDQGYKVGTL--PGLNQLNLSSTGIAS-I--AEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLE 326 (505)
T ss_pred cccCCcccccccccccccc--cchhhhhccccCcch-h--cCCCccchhhhcccccceeeecccCccccccccchhhccc
Confidence 66666655321 1223344 666666666666652 2 11332 3445666667776666641 1112344455
Q ss_pred CCCEEEccCCccc
Q 039925 302 NLMELSVSRNKLS 314 (549)
Q Consensus 302 ~L~~L~Ls~N~l~ 314 (549)
+|+.|.+..|.++
T Consensus 327 nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 327 NLKHLRITLNYLN 339 (505)
T ss_pred hhhhhhccccccc
Confidence 5666666666655
No 266
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.98 E-value=1e-09 Score=109.48 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=62.7
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
..|...+.||+|+||.||+|+..+.. . .+++.. ...
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCe
Confidence 44788889999999999999874322 1 345554 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||++ |++.+.+.... .+++|..+..++.+++.|+.|||
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH 142 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLH 142 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999997 58877776433 45899999999999999999999
No 267
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.97 E-value=4.9e-10 Score=112.09 Aligned_cols=73 Identities=26% Similarity=0.236 Sum_probs=59.3
Q ss_pred CccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|+... +.. .+++.. .+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-----~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----ADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-----CCEEEEEE
Confidence 369999999999999753 322 233333 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... .+++.....++.|+++||+|||
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 113 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLH 113 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 5788888899999999999999
No 268
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.97 E-value=7.5e-10 Score=108.45 Aligned_cols=79 Identities=18% Similarity=0.267 Sum_probs=62.4
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||+|+... +.. .+++.. .+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-----CCcEE
Confidence 47778899999999999998753 222 233333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ ++|.+++.... ...+++.....++.|+++|++|||
T Consensus 76 ~v~e~~~-~~l~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh 117 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASP----LSGIPLPLIKSYLFQLLQGLAFCH 117 (284)
T ss_pred EEeeccc-cCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999996 68998887543 346899999999999999999999
No 269
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.97 E-value=1.2e-09 Score=108.10 Aligned_cols=79 Identities=16% Similarity=0.320 Sum_probs=63.1
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc--e-----------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW--T-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~--~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||+|+..... + ++++.. ....+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-----~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-----CCeEE
Confidence 46788889999999999999875322 1 344444 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ |+|.+++.... ..+++.....++.|+++||+|||
T Consensus 81 lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH 121 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCH 121 (301)
T ss_pred EEEeccc-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999998 68998887543 35788889999999999999999
No 270
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=3.6e-10 Score=112.51 Aligned_cols=85 Identities=18% Similarity=0.282 Sum_probs=64.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCce-EE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDF-KA 437 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~-~~ 437 (549)
.++|...+++|+|+||.++..+.+.... ..|... +...+. .+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds--~~~~~~~l~ 80 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDS--FEEDGQLLC 80 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccc--hhcCCceEE
Confidence 4577788899999999998776543221 122111 111344 89
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+|++||++++.|...+ +.-++..+.+++..|+..|+.|||
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred EEEeecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765 456888899999999999999999
No 271
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.96 E-value=7.7e-10 Score=106.86 Aligned_cols=73 Identities=19% Similarity=0.168 Sum_probs=59.0
Q ss_pred CccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|.... +.. .+++.. .+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-----KDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-----CCeEEEEE
Confidence 468999999999998743 221 233433 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... .+++.....++.|++.||.|||
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH 114 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLH 114 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 5788888999999999999999
No 272
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.95 E-value=1e-09 Score=110.33 Aligned_cols=87 Identities=20% Similarity=0.250 Sum_probs=65.9
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce------------------------eEEEec------cccCCCceEEEE
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------AGYSEG------TDFKGIDFKAVV 439 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------~g~~~~------~~~~~~~~~~lv 439 (549)
......|..-..||+|+.|.||.+.-.. +.. .++... ..|-..+..++|
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 4566678888899999999999998533 222 011000 001125789999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++|+|.+.+... .++..+...|++++.+||+|||
T Consensus 349 MEym~ggsLTDvVt~~-------~~~E~qIA~Icre~l~aL~fLH 386 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT-------RMTEGQIAAICREILQGLKFLH 386 (550)
T ss_pred EeecCCCchhhhhhcc-------cccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998754 4899999999999999999999
No 273
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.95 E-value=2.1e-09 Score=105.64 Aligned_cols=80 Identities=15% Similarity=0.285 Sum_probs=62.7
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.++|...+.||+|+||.||+|..... .. ++++.. ....
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-----ERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-----CCeE
Confidence 35688889999999999999986532 21 233333 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++ |+|.+++.... ..+++.....++.|+++||+|||
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH 120 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCH 120 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998 59999887543 35788888999999999999999
No 274
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.95 E-value=1.6e-09 Score=105.26 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=62.6
Q ss_pred ccCcCCCcc--ccCceecEEEEEeCCC-ce-------------------------------eEEEeccccCCCceEEEEE
Q 039925 395 NEFSSSNMI--GQGSFGSVYKGILGEK-WT-------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 395 ~~~~~~~~l--G~G~~g~Vy~~~~~~~-~~-------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++|...+.+ |+|+||.||++..... .. .+++.. .+..++||
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-----~~~~~iv~ 88 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTT-----LKGHVLIM 88 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEec-----CCeeEEEE
Confidence 345554555 9999999999986433 22 233444 56789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... .++|.....++.|+++|+.|||
T Consensus 89 e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH 126 (267)
T PHA03390 89 DYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLH 126 (267)
T ss_pred EcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997542 6899999999999999999999
No 275
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.94 E-value=1e-09 Score=109.79 Aligned_cols=73 Identities=12% Similarity=0.080 Sum_probs=58.4
Q ss_pred CccccCceecEEEEEeCC----Cce---------------------------------------eEEEeccccCCCceEE
Q 039925 401 NMIGQGSFGSVYKGILGE----KWT---------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~----~~~---------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+.||+|+||.||+++... +.. ++++.. ++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-----GGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-----CCeEE
Confidence 579999999999998632 111 344444 66789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.++++... .+.+.....++.|+++||+|||
T Consensus 77 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH 117 (323)
T cd05584 77 LILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLH 117 (323)
T ss_pred EEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997543 5777788889999999999999
No 276
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.94 E-value=1.9e-09 Score=103.13 Aligned_cols=79 Identities=25% Similarity=0.317 Sum_probs=64.6
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceEEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
+|...+.||+|++|.||++.... +.. .+.+.. ....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-----KDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeEEEE
Confidence 46777889999999999999863 321 233433 5678999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||+++++|.+++.... ..+++..+..++.++++|+.|||
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh 115 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLH 115 (253)
T ss_pred EecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999987642 46899999999999999999999
No 277
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.94 E-value=1.3e-09 Score=109.43 Aligned_cols=46 Identities=22% Similarity=0.058 Sum_probs=41.0
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH 113 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLH 113 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999987543 5888899999999999999999
No 278
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.93 E-value=2e-09 Score=105.94 Aligned_cols=82 Identities=17% Similarity=0.269 Sum_probs=64.4
Q ss_pred cccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccccCCCce
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
-++|...+.||+|+||.||+|..... .. .+++.. .....
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---~~~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVG---SNLDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEe---cCCCc
Confidence 35788889999999999999998642 21 233333 11278
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||++ ++|.+++.... ..+++.....++.|++.||+|||
T Consensus 81 ~~lv~e~~~-~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 123 (293)
T cd07843 81 IYMVMEYVE-HDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLH 123 (293)
T ss_pred EEEEehhcC-cCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999998 59999887543 36899999999999999999999
No 279
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.93 E-value=8.8e-10 Score=106.51 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=41.4
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++... .+++..+..++.|+++||+|||
T Consensus 65 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH 110 (265)
T cd05579 65 KKNLYLVMEYLPGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLH 110 (265)
T ss_pred CcEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999997543 6899999999999999999999
No 280
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.93 E-value=6.3e-10 Score=112.63 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=64.6
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|.... +.. ++++.. .+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-----EEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-----CCe
Confidence 367788899999999999999763 322 122333 677
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH 118 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVH 118 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998643 5888889999999999999999
No 281
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.93 E-value=1.5e-09 Score=104.21 Aligned_cols=78 Identities=26% Similarity=0.378 Sum_probs=63.4
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|++|.||+|...... . .+++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-----SDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-----CCEEE
Confidence 3667788999999999999875322 1 233333 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++++|.+++... ..+++..+..++.|++.|+.|||
T Consensus 76 ~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH 116 (254)
T cd06627 76 IILEYAENGSLRQIIKKF------GPFPESLVAVYVYQVLQGLAYLH 116 (254)
T ss_pred EEEecCCCCcHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998754 36899999999999999999999
No 282
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.93 E-value=1e-09 Score=108.14 Aligned_cols=81 Identities=20% Similarity=0.155 Sum_probs=63.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|.....||+|+||.||++.... +.. .+.+.. .+.
T Consensus 19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~ 93 (292)
T cd06658 19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-----GDE 93 (292)
T ss_pred chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-----CCe
Confidence 344455556779999999999998643 221 233333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++... .+++.....++.+++.||+|||
T Consensus 94 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH 135 (292)
T cd06658 94 LWVVMEFLEGGALTDIVTHT-------RMNEEQIATVCLSVLRALSYLH 135 (292)
T ss_pred EEEEEeCCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998642 4788999999999999999999
No 283
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.92 E-value=9.5e-10 Score=110.10 Aligned_cols=73 Identities=23% Similarity=0.210 Sum_probs=59.4
Q ss_pred CccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|+... +.. .+++.. .+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----TEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-----CCEEEEEE
Confidence 469999999999998643 322 233444 67889999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|..++.... .+++.....++.|+++||+|||
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH 113 (325)
T cd05604 76 DFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLH 113 (325)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887543 6888899999999999999999
No 284
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.92 E-value=1.3e-09 Score=109.79 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=59.5
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|+... +.. .+++...........++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 5667889999999999998643 221 12222211111234799
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++ ++|.+++.... .+++.....++.|+++||+|||
T Consensus 82 v~e~~~-~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH 120 (338)
T cd07859 82 VFELME-SDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIH 120 (338)
T ss_pred EEecCC-CCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHH
Confidence 999996 68999887543 5889999999999999999999
No 285
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.92 E-value=2.5e-09 Score=103.66 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=62.8
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-e----------------------------------------eEEEeccccCCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-T----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~----------------------------------------~g~~~~~~~~~~ 433 (549)
.+|...+.||+|+||.||+|...+.. . .+++.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCC
Confidence 57888999999999999999875422 1 122221 112
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.+++.... .+++...++++.+++.||+|||
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH 123 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLH 123 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999987543 4788888999999999999999
No 286
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.92 E-value=8.3e-10 Score=106.51 Aligned_cols=78 Identities=22% Similarity=0.171 Sum_probs=62.5
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~ 436 (549)
+|...+.||.|+||.||+|.... +.. .+.+ ......
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 46677889999999999998753 222 1112 225678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+||+++++|.+++... ..+++.....++.|+++|+.|||
T Consensus 76 ~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh 117 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLH 117 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999754 25888899999999999999999
No 287
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.92 E-value=9.9e-10 Score=109.98 Aligned_cols=73 Identities=25% Similarity=0.238 Sum_probs=58.4
Q ss_pred CccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|+...... .+++.. .+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----ADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-----CCeEEEEE
Confidence 369999999999998754321 233333 66789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... .+.......++.|+++||+|||
T Consensus 76 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH 113 (325)
T cd05602 76 DYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLH 113 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 4667777789999999999999
No 288
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.92 E-value=1.2e-09 Score=120.35 Aligned_cols=87 Identities=15% Similarity=0.132 Sum_probs=67.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|....... ++++.. ....
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~~~ 87 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KANQ 87 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cCCC
Confidence 45678889999999999999998754321 233322 1145
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++|.... .....+++...+.|+.||+.||+|||
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~--~~~g~L~E~~Il~Ia~QIL~ALaYLH 135 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCY--KMFGKIEEHAIVDITRQLLHALAYCH 135 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999997532 01246899999999999999999999
No 289
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.92 E-value=2.4e-09 Score=117.42 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=65.2
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+... +.. ++++.. .+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-----~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-----GDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-----CCE
Confidence 467888899999999999998753 221 345554 677
Q ss_pred EEEEEeecCCCCcccccccCCC-----CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNN-----KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~-----~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++..... .......++...++++.|+++||+|||
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH 130 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH 130 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999864210 011234677888999999999999999
No 290
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.92 E-value=3.7e-09 Score=103.71 Aligned_cols=78 Identities=19% Similarity=0.193 Sum_probs=61.9
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||+|...+.. . .+++.. .+..+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRLY 76 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEEE
Confidence 5777889999999999999876432 1 334444 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++++.+..+.... ..+++.....++.+|+.|++|||
T Consensus 77 iv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH 117 (288)
T cd07833 77 LVFEYVERTLLELLEASP------GGLPPDAVRSYIWQLLQAIAYCH 117 (288)
T ss_pred EEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999988777665532 35889999999999999999999
No 291
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.92 E-value=2.3e-09 Score=106.46 Aligned_cols=80 Identities=15% Similarity=0.276 Sum_probs=63.0
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc--e-----------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW--T-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
.++|...+.||+|+||.||+|+..... + .+++.. .+..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 79 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-----DKSL 79 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-----CCeE
Confidence 356788889999999999999865322 1 344544 6678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++ +|.+++.... ..+++.....++.|+++||+|||
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH 121 (309)
T cd07872 80 TLVFEYLDK-DLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCH 121 (309)
T ss_pred EEEEeCCCC-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999985 8888876543 35788888899999999999999
No 292
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.91 E-value=1.2e-09 Score=120.61 Aligned_cols=86 Identities=21% Similarity=0.352 Sum_probs=46.3
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAI 132 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L 132 (549)
|..++.|++|||++|.=-+.+|+++++|-+||+|+|+++.+. .+|.++.+++.| .+|++..+.-...+|.....|++|
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L-~~Lnl~~~~~l~~~~~i~~~L~~L 644 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKL-IYLNLEVTGRLESIPGILLELQSL 644 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhh-heeccccccccccccchhhhcccc
Confidence 444555555555554433355555555555555555555555 555555555555 555555554443444444455555
Q ss_pred CEEEeecc
Q 039925 133 QVMIFKEN 140 (549)
Q Consensus 133 ~~L~L~~n 140 (549)
++|.+...
T Consensus 645 r~L~l~~s 652 (889)
T KOG4658|consen 645 RVLRLPRS 652 (889)
T ss_pred cEEEeecc
Confidence 55555443
No 293
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.91 E-value=1.1e-09 Score=109.33 Aligned_cols=73 Identities=26% Similarity=0.221 Sum_probs=58.6
Q ss_pred CccccCceecEEEEEeCCC-ce---------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEK-WT---------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~-~~---------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
++||+|+||.||+|+..+. .. .+++.. .+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-----AEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCEEEEEE
Confidence 3699999999999997543 21 233444 67789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|..++.... .++......++.||++||+|||
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH 113 (321)
T cd05603 76 DYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLH 113 (321)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887543 5777788889999999999999
No 294
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.91 E-value=2.9e-09 Score=104.33 Aligned_cols=77 Identities=19% Similarity=0.191 Sum_probs=62.6
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|.... +.. .+++.. ....++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~~ 76 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFVL 76 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeEE
Confidence 5667789999999999999753 221 334443 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+ +++|.++++... ..+++.++..++.|+++||+|||
T Consensus 77 v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 116 (286)
T cd07832 77 VMEYM-PSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMH 116 (286)
T ss_pred Eeccc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999987543 46899999999999999999999
No 295
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.91 E-value=2e-09 Score=105.54 Aligned_cols=77 Identities=18% Similarity=0.153 Sum_probs=62.7
Q ss_pred cCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceEEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.|...+.||+|++|.||+|.... +.. .+++.. .+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-----~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-----GDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-----CCeEEEE
Confidence 56667789999999999998643 221 344444 5778999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||+++++|.+++... .+++..+..++.+++.|++|||
T Consensus 95 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH 132 (285)
T cd06648 95 MEFLEGGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLH 132 (285)
T ss_pred EeccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998752 4788899999999999999999
No 296
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.91 E-value=5.4e-09 Score=102.46 Aligned_cols=83 Identities=16% Similarity=0.224 Sum_probs=60.8
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||+|+... +.. .+++...+..+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4556789999999999999864 322 23343311111223
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+++|||++ ++|.+++.... ...++|..+..++.|+++||.|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~----~~~l~~~~~~~~~~~i~~al~~LH 124 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP----KPGLPPETIKDLMRQLLRGVDFLH 124 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999997 48988887543 235899999999999999999999
No 297
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=3.7e-09 Score=103.20 Aligned_cols=85 Identities=20% Similarity=0.155 Sum_probs=68.1
Q ss_pred ccccCcCCCccccCceecEEEEEe-CCCce----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGIL-GEKWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..++|....+||.|..++||+|+. +.+.+ ..+|.... ....+
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv---~~~LW 100 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV---DSELW 100 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe---cceeE
Confidence 456788899999999999999986 33333 12333222 67899
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||.||.+||+.+.++..- ...++......|.+++.+||.|||
T Consensus 101 vVmpfMa~GS~ldIik~~~----~~Gl~E~~Ia~iLre~LkaL~YLH 143 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYY----PDGLEEASIATILREVLKALDYLH 143 (516)
T ss_pred EeehhhcCCcHHHHHHHHc----cccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998654 345888888999999999999999
No 298
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.90 E-value=3.6e-09 Score=103.83 Aligned_cols=83 Identities=16% Similarity=0.251 Sum_probs=60.4
Q ss_pred CcCCCccccCceecEEEEEeCCC-ce----------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEK-WT----------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~-~~----------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||+|+..+. .. ++++..........
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 56678899999999999987532 21 12222111112345
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||++ ++|.++++... ...+++.....++.|++.||+|||
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVP----PPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 789999998 58988887543 245889999999999999999999
No 299
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.90 E-value=2.9e-09 Score=105.27 Aligned_cols=87 Identities=20% Similarity=0.228 Sum_probs=63.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccc----
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTD---- 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~---- 429 (549)
.+.++|...+.||+|+||.||+|..... .. .+++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 3567889999999999999999998542 22 22222200
Q ss_pred -cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 -FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 -~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.......++|+||+++ ++.+.+.... ..+++.....++.|++.||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 0012368899999986 6777766432 46899999999999999999999
No 300
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.90 E-value=2.3e-09 Score=104.92 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=61.2
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||.|++|.||+|.... +.. .+++.. .+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-----~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-----ENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----CCeEEE
Confidence 4556789999999999998742 322 233433 577899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++ ++|.+++.... ...+++..++.++.|+++||+|||
T Consensus 76 v~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~~L~~lH 116 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSP----LTGLDPPLIKSYLYQLLQGIAYCH 116 (283)
T ss_pred EEeccC-cCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999995 69999987543 246899999999999999999999
No 301
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.90 E-value=2.7e-09 Score=104.24 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=41.2
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++... ..++|..+..++.|+++|++|||
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH 114 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMH 114 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999988753 36899999999999999999999
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.90 E-value=3.9e-09 Score=102.03 Aligned_cols=71 Identities=18% Similarity=0.135 Sum_probs=58.4
Q ss_pred cccCceecEEEEEeCCC-c-e-------------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 403 IGQGSFGSVYKGILGEK-W-T-------------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 403 lG~G~~g~Vy~~~~~~~-~-~-------------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
||.|+||.||+|+.... . + .+.+.. +...++|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-----KKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-----CCccEEEEecC
Confidence 69999999999998632 2 1 233444 56789999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|+|.++++... .+++..+..++.|++.|++|||
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH 110 (262)
T cd05572 76 LGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLH 110 (262)
T ss_pred CCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999998643 4788889999999999999999
No 303
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.89 E-value=3e-09 Score=106.03 Aligned_cols=81 Identities=21% Similarity=0.228 Sum_probs=65.5
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|...+ +.. .+.+.. ...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-----ETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-----CCE
Confidence 367778899999999999998754 222 233333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ...+++.....++.|+++||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQP----GKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCC----CCccCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987542 346889999999999999999999
No 304
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.89 E-value=3.3e-09 Score=104.53 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=62.8
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|.... +.. .+++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 467888899999999999999753 222 12222211111223
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++ +|.+++..... .....+++.....++.||++||.|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGR-GPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcc-cCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999985 89888865431 11346899999999999999999999
No 305
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.89 E-value=2.2e-10 Score=118.18 Aligned_cols=129 Identities=22% Similarity=0.193 Sum_probs=89.1
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCE
Q 039925 55 NFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQV 134 (549)
Q Consensus 55 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~ 134 (549)
.+..++.+.+..|.+. .+-..+..+++|+.|++.+|+|. .+...+..+++| ++|++++|.|+... .+..++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L-~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNL-QVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcc-hheecccccccccc--chhhccchhh
Confidence 4566666777777777 33445677788888888888887 444446777888 88888888887543 3455666888
Q ss_pred EEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCc
Q 039925 135 MIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 135 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
|++++|.|+. + ..+..+++|+.+++++|.+...-+.....+. ++.+++.+|.+.
T Consensus 145 L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 145 LNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred heeccCcchh-c-cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh
Confidence 8888888872 2 3455578888888888887743331034555 777888888776
No 306
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.88 E-value=2.3e-09 Score=105.39 Aligned_cols=79 Identities=22% Similarity=0.194 Sum_probs=64.8
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||++...... . .+++.. ...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-----DSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCe
Confidence 36777889999999999999875422 1 233433 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .+++..+..++.|++.||.|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH 118 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLH 118 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 6888999999999999999999
No 307
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.88 E-value=2.3e-09 Score=110.05 Aligned_cols=81 Identities=19% Similarity=0.238 Sum_probs=67.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~ 431 (549)
...++|...++||+|+||+|+.+.+++... ++.+..
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT---- 440 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT---- 440 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc----
Confidence 456789999999999999999998865432 222333
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++.+.||||+.||++..+.+.. .++.++..-+|..|+.||.|||
T Consensus 441 -~~~l~fvmey~~Ggdm~~~~~~~-------~F~e~rarfyaAev~l~L~fLH 485 (694)
T KOG0694|consen 441 -KEHLFFVMEYVAGGDLMHHIHTD-------VFSEPRARFYAAEVVLGLQFLH 485 (694)
T ss_pred -CCeEEEEEEecCCCcEEEEEecc-------cccHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999977777654 4899988889999999999999
No 308
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.88 E-value=4.4e-09 Score=102.67 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=42.2
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.|+.|||
T Consensus 65 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~ql~~~l~~lH 112 (277)
T cd05577 65 KDDLCLVMTLMNGGDLKYHIYNVG----EPGFPEARAIFYAAQIICGLEHLH 112 (277)
T ss_pred CCeEEEEEecCCCCcHHHHHHHcC----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999997543 246889999999999999999999
No 309
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.88 E-value=5.2e-09 Score=108.96 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=66.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce------------------------------eEEEeccccCCCceEEEEEee
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
....|...+.||+|+||.||+|....... ++++.. .+..++||||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~lv~e~ 241 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTCLVLPK 241 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEEEEEEc
Confidence 45578888999999999999999864321 455555 6778999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+. |+|.+++.... ..++|.+++.++.|+++||+|||
T Consensus 242 ~~-~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH 277 (461)
T PHA03211 242 YR-SDLYTYLGARL-----RPLGLAQVTAVARQLLSAIDYIH 277 (461)
T ss_pred cC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 85 79999887543 36899999999999999999999
No 310
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.87 E-value=5.2e-09 Score=102.51 Aligned_cols=79 Identities=19% Similarity=0.313 Sum_probs=60.6
Q ss_pred CcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|+..+.. . .+++... ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 345578999999999999876422 1 3344430 0267899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++ +|.+++.... ..+++..+..++.|+++|++|||
T Consensus 78 v~e~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH 117 (287)
T cd07840 78 VFEYMDH-DLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLH 117 (287)
T ss_pred Eeccccc-cHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999985 8988887542 46899999999999999999999
No 311
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.87 E-value=2.2e-09 Score=71.63 Aligned_cols=38 Identities=55% Similarity=0.941 Sum_probs=30.3
Q ss_pred hhHHHHHHHHhhcC-CCCCCCCCCCCC--CCCCCCCcceeC
Q 039925 2 TDHLALLAIKSLLH-DRRGVTSSWSNS--IDLCQWRGVTCT 39 (549)
Q Consensus 2 ~~~~~l~~~~~~~~-~~~~~~~~w~~~--~~~c~w~gv~c~ 39 (549)
+|++||++||+++. +|.+.+.+|+.+ .+||+|.||.|+
T Consensus 3 ~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 3 QDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred HHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 68999999999998 566899999887 699999999995
No 312
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.87 E-value=1.9e-09 Score=109.85 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=65.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+++... +.. .+++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~----- 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD----- 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 567789999999999999999998753 222 233444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+...++||||+++|+|.++++.. .++......++.|+++||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH 159 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIH 159 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999998753 3667777889999999999999
No 313
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.87 E-value=2.4e-09 Score=105.68 Aligned_cols=82 Identities=20% Similarity=0.252 Sum_probs=64.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|.+.+ +.. +|+|.. .
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~ 86 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----D 86 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-----C
Confidence 345678889999999999999999874 221 355555 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||++ +++.++..... ..+++..+..++.++++||+|||
T Consensus 87 ~~~~~v~e~~~-~~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH 131 (296)
T cd06618 87 SDVFICMELMS-TCLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLK 131 (296)
T ss_pred CeEEEEeeccC-cCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 67899999985 46777665432 36899999999999999999999
No 314
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.87 E-value=2.9e-09 Score=105.10 Aligned_cols=79 Identities=20% Similarity=0.122 Sum_probs=62.4
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCce-----------------------------------eEEEeccccCCCceEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKWT-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...|.....||+|+||.||+|... ++.. .+.+.. .+..+
T Consensus 20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~ 94 (297)
T cd06659 20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----GEELW 94 (297)
T ss_pred hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-----CCeEE
Confidence 344555667999999999999864 2322 233444 56789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++... .+++.....++.|++.|++|||
T Consensus 95 iv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH 134 (297)
T cd06659 95 VLMEFLQGGALTDIVSQT-------RLNEEQIATVCESVLQALCYLH 134 (297)
T ss_pred EEEecCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987642 4889999999999999999999
No 315
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.86 E-value=2.1e-09 Score=109.74 Aligned_cols=82 Identities=18% Similarity=0.191 Sum_probs=60.2
Q ss_pred cCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|...+.||+|+||.||+|... ++.. .+++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 5788899999999999999864 3322 2233321001112679
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ ++|.+++... ..+++.....++.|+++||+|||
T Consensus 81 lv~e~~~-~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH 120 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLH 120 (372)
T ss_pred EEeeccc-cCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999997 5788877643 36889999999999999999999
No 316
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.86 E-value=4.3e-09 Score=104.52 Aligned_cols=82 Identities=23% Similarity=0.235 Sum_probs=63.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~ 432 (549)
.....|...+.||+|+||.||+|+..... . .+++..
T Consensus 12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 86 (308)
T cd06634 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR----- 86 (308)
T ss_pred CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----
Confidence 34555777788999999999999874322 1 344444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+. |++.+++.... ..+++..+..++.+++.|+.|||
T Consensus 87 ~~~~~lv~e~~~-~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH 132 (308)
T cd06634 87 EHTAWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLH 132 (308)
T ss_pred CCeeEEEEEccC-CCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999997 68888776433 35788889999999999999999
No 317
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.86 E-value=7.5e-09 Score=108.90 Aligned_cols=89 Identities=19% Similarity=0.183 Sum_probs=73.6
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
..++-|...++||+|.+|.||+++-. ++.. +|++...+-.+.+.
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 46677888889999999999999853 3322 56665555556789
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||||.+||..|.++... +..+.|....-|++.+.+|+.|||
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred EEEEeeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998665 567999999999999999999999
No 318
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.86 E-value=2.9e-09 Score=106.39 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=68.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~ 431 (549)
..-.||..+++||+|+|.+||+|+-.+.. . +--+.+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD---- 145 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD---- 145 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec----
Confidence 45568999999999999999999865432 2 122334
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..+|.|+||++||+|.++|++.+ .|+......+|.+|..|++|||
T Consensus 146 -~~sLYFvLe~A~nGdll~~i~K~G------sfde~caR~YAAeIldAleylH 191 (604)
T KOG0592|consen 146 -EESLYFVLEYAPNGDLLDLIKKYG------SFDETCARFYAAEILDALEYLH 191 (604)
T ss_pred -ccceEEEEEecCCCcHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999764 7888888899999999999999
No 319
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.85 E-value=1.5e-08 Score=100.40 Aligned_cols=81 Identities=16% Similarity=0.275 Sum_probs=63.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCce
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
..++|...+.||+|+||.||+|.... +.. .+++.. ...
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~ 77 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-----KET 77 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-----CCe
Confidence 35788889999999999999998753 221 244444 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||++ |+|.+++.... ..+++.....++.|++.||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH 120 (303)
T cd07869 78 LTLVFEYVH-TDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIH 120 (303)
T ss_pred EEEEEECCC-cCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999996 68888876543 35788888899999999999999
No 320
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.85 E-value=4.4e-09 Score=109.63 Aligned_cols=90 Identities=20% Similarity=0.360 Sum_probs=62.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e-------------------------------eEEEecccc---CCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------AGYSEGTDF---KGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------~g~~~~~~~---~~~~~~ 436 (549)
...++|...+.||+|+||.||+|+..+.. . .+++..... ......
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 35567999999999999999999875322 1 122211100 112356
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++ ++.+++.... .....+++.....++.|+++||+|||
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~--~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYA--RNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred EEEEecCCc-cHHHHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 799999985 7777765321 12346888889999999999999999
No 321
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.85 E-value=1.1e-08 Score=100.51 Aligned_cols=82 Identities=20% Similarity=0.326 Sum_probs=63.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
.++++|...+.||+|+||.||+|.... +.. .+++.. .+
T Consensus 2 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~ 76 (291)
T cd07870 2 GAATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-----KE 76 (291)
T ss_pred CccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-----CC
Confidence 367889999999999999999997642 211 344444 56
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++ +++.+++.... ..+.+.....++.|++.||+|||
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH 120 (291)
T cd07870 77 TLTFVFEYMH-TDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIH 120 (291)
T ss_pred eEEEEEeccc-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999996 78877765432 35778888889999999999999
No 322
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=98.84 E-value=2.2e-09 Score=102.68 Aligned_cols=82 Identities=21% Similarity=0.233 Sum_probs=68.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~ 432 (549)
..-++|...++||+|+||+||.++..+... .-.+.+
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt----- 96 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT----- 96 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc-----
Confidence 346789999999999999999998764332 122344
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++..++|+||+.||.|...|++++ .++..+..-++..|+.||.|||
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~eg------~F~E~~arfYlaEi~lAL~~LH 142 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQREG------RFSEDRARFYLAEIVLALGYLH 142 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhcC------CcchhHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999764 6888877779999999999999
No 323
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.84 E-value=6.5e-09 Score=102.22 Aligned_cols=80 Identities=19% Similarity=0.311 Sum_probs=63.9
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
-++|...+.||+|+||.||+|.... +.. .+++.. .+..
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-----KKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-----CCeE
Confidence 3578888899999999999998753 222 234444 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++ |+|.+++.... ..+++.....++.|+++||.|||
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH 120 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCH 120 (291)
T ss_pred EEEEecCC-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998 49999887543 36788889999999999999999
No 324
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.84 E-value=3.5e-09 Score=106.60 Aligned_cols=86 Identities=16% Similarity=0.207 Sum_probs=62.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...+.|...+.||+|+||.||+|..... .. .+++........
T Consensus 2 ~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 2 EVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred ccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence 3556788889999999999999986432 11 111211000011
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+. ++|.+++... ..+++.....++.|++.||.|||
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH 125 (337)
T cd07858 82 NDVYIVYELMD-TDLHQIIRSS------QTLSDDHCQYFLYQLLRGLKYIH 125 (337)
T ss_pred CcEEEEEeCCC-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 34799999996 7898888753 35889999999999999999999
No 325
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.84 E-value=4.9e-09 Score=103.90 Aligned_cols=84 Identities=19% Similarity=0.250 Sum_probs=65.5
Q ss_pred cccccCcCCCccccCceecEEEEEe-CCCce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGIL-GEKWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
.-.+.|...+.||+|.||.||||+. .++.+ .+.-.+ ...
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~---~~~ 190 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS---KLS 190 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe---cCC
Confidence 4556788889999999999999985 44443 232222 114
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..+|||+|||++ +|.-++... .-.|+..+...++.|+.+||+|+|
T Consensus 191 ~siYlVFeYMdh-DL~GLl~~p-----~vkft~~qIKc~mkQLl~Gl~~cH 235 (560)
T KOG0600|consen 191 GSIYLVFEYMDH-DLSGLLSSP-----GVKFTEPQIKCYMKQLLEGLEYCH 235 (560)
T ss_pred ceEEEEEecccc-hhhhhhcCC-----CcccChHHHHHHHHHHHHHHHHHh
Confidence 689999999997 888887753 256899999999999999999999
No 326
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.83 E-value=6.8e-09 Score=103.32 Aligned_cols=77 Identities=23% Similarity=0.279 Sum_probs=60.3
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
|...+.||+|+||.||+|+... +.. .+++.. ....+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEEE
Confidence 5556779999999999998643 221 345555 66789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ |++.+++.... ..++|..+..++.|++.|+.|||
T Consensus 98 lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH 138 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLH 138 (313)
T ss_pred EEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999996 67877776433 46889999999999999999999
No 327
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.83 E-value=7e-09 Score=102.12 Aligned_cols=73 Identities=19% Similarity=0.137 Sum_probs=59.1
Q ss_pred CCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 400 SNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
...||+|+||.||+|.... +.. .+++.. .+..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-----CCEEEEEEecC
Confidence 3569999999999998743 221 334444 67889999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++|.+++... .+++.....++.|++.|++|||
T Consensus 100 ~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH 133 (292)
T cd06657 100 EGGALTDIVTHT-------RMNEEQIAAVCLAVLKALSVLH 133 (292)
T ss_pred CCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999987542 4788899999999999999999
No 328
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.83 E-value=2.2e-09 Score=104.80 Aligned_cols=84 Identities=23% Similarity=0.293 Sum_probs=63.9
Q ss_pred ccCcCCCccccCceecEEEEEeCC-CceeE--EEe-------------------------cc-------ccCCCceEEEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWTAG--YSE-------------------------GT-------DFKGIDFKAVV 439 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~~g--~~~-------------------------~~-------~~~~~~~~~lv 439 (549)
++|...+.||+|+||.||+|.... +..+. .+. .. .+...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 367778899999999999999753 22200 000 00 01225678999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++.... .+++.....++.|++.||.|||
T Consensus 81 ~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh 119 (280)
T cd05581 81 LEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLH 119 (280)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998643 6899999999999999999999
No 329
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.82 E-value=2.2e-09 Score=105.12 Aligned_cols=77 Identities=17% Similarity=0.278 Sum_probs=58.9
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|+... +.. .+++ ......++
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~l 76 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLTL 76 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceEE
Confidence 5566789999999999999753 322 0111 12456799
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+||++ |+|.+++.... ..+++.....++.||++||.|||
T Consensus 77 v~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH 116 (284)
T cd07839 77 VFEYCD-QDLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCH 116 (284)
T ss_pred EEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999997 58888876432 35899999999999999999999
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.82 E-value=8.7e-09 Score=100.72 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=59.4
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|++|.||+|.... +.. .+++.. +...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-----KGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-----CCCEEE
Confidence 3455679999999999998753 322 122222 567899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+||+++ ++.+++.... ..+++..+..++.++++|+.|||
T Consensus 76 v~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH 115 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCH 115 (283)
T ss_pred EEeccCC-CHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999975 8888887543 46899999999999999999999
No 331
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.82 E-value=7e-09 Score=96.22 Aligned_cols=81 Identities=21% Similarity=0.232 Sum_probs=69.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~ 433 (549)
.-++|...+.||.|+||.|..++.+.... .+.+.+ .
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-----~ 116 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-----N 116 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-----C
Confidence 45688889999999999999998754432 345555 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|.|..+|++.+ +++..+..-+|.+|+.|++|||
T Consensus 117 ~~lymvmeyv~GGElFS~Lrk~~------rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 117 SNLYMVMEYVPGGELFSYLRKSG------RFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred CeEEEEEeccCCccHHHHHHhcC------CCCchhHHHHHHHHHHHHHHHH
Confidence 88999999999999999999754 7999998899999999999999
No 332
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.82 E-value=2.1e-08 Score=100.47 Aligned_cols=48 Identities=15% Similarity=0.093 Sum_probs=41.9
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++..++|+||+++|++.++++... ...+++.....++.|++.||+|||
T Consensus 71 ~~~~~~v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~lH 118 (328)
T cd08226 71 GSWLWVISPFMAYGSANSLLKTYF----PEGMSEALIGNILFGALRGLNYLH 118 (328)
T ss_pred CCceEEEEecccCCCHHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 667899999999999999988643 235888888999999999999999
No 333
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.81 E-value=8.3e-09 Score=94.32 Aligned_cols=78 Identities=21% Similarity=0.233 Sum_probs=63.4
Q ss_pred cCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
.|...+.+|+|.||.||+|+.. .++. ..++.. .+...
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-----~~~l~ 77 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-----KSNLS 77 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-----CCceE
Confidence 4667789999999999999863 3332 223333 56788
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+|||+. +|+..+++.. -.++.++...++.++.+|++|||
T Consensus 78 lVfEfm~t-dLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H 118 (318)
T KOG0659|consen 78 LVFEFMPT-DLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCH 118 (318)
T ss_pred EEEEeccc-cHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHH
Confidence 99999997 9999999765 57899999999999999999999
No 334
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=3.2e-09 Score=107.44 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=66.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce------------------------eEEEeccc-------cCCCceEEEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------AGYSEGTD-------FKGIDFKAVVF 440 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------~g~~~~~~-------~~~~~~~~lv~ 440 (549)
...+.|.+...||.|+||.||||+-++..+ ++.|.... |.-+...++..
T Consensus 29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 344556666779999999999998765443 12222210 12256789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+||..+..+-.-+ ..++..+..-++.+++.||.|||
T Consensus 109 EFC~GGAVDaimlEL~-----r~LtE~QIqvvc~q~ldALn~LH 147 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELG-----RVLTEDQIQVVCYQVLDALNWLH 147 (1187)
T ss_pred eecCCchHhHHHHHhc-----cccchHHHHHHHHHHHHHHHHHh
Confidence 9999999998887544 56888888889999999999999
No 335
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.81 E-value=6.2e-09 Score=105.92 Aligned_cols=81 Identities=14% Similarity=0.214 Sum_probs=63.8
Q ss_pred cCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCceEEEEE
Q 039925 398 SSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 398 ~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
....+||+|+|-+||||......+ +-++..+.........+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 345689999999999999765443 2223322223346688999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|.|..|+|+.|+++.+ ..+.+...++|+||.+||.|||
T Consensus 123 EL~TSGtLr~Y~kk~~------~vn~kaik~W~RQILkGL~yLH 160 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR------RVNIKAIKSWCRQILKGLVYLH 160 (632)
T ss_pred ecccCCcHHHHHHHhc------cCCHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999775 6788888999999999999999
No 336
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=4.4e-09 Score=76.63 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=26.9
Q ss_pred ceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCc
Q 039925 109 TKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNE 165 (549)
Q Consensus 109 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 165 (549)
++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 4 ~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 4 ESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp SEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 444444444443333444444444444444444444444444445555555554443
No 337
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.81 E-value=5.1e-10 Score=105.99 Aligned_cols=193 Identities=19% Similarity=0.225 Sum_probs=115.0
Q ss_pred cCCCCCCEeecccccccccCCcc----cccccCccceeeecccccccc-------------cccccCCCCCCCEEEeecc
Q 039925 78 GRLFRLEYLLLANNHFSGKIPAN----LSHCSNLLTKLFICETHLSGQ-------------LLDFIGNPSAIQVMIFKEN 140 (549)
Q Consensus 78 ~~l~~L~~L~Ls~n~l~~~~p~~----l~~l~~L~~~L~Ls~n~l~~~-------------~~~~~~~l~~L~~L~L~~n 140 (549)
..+++|++|+||.|-+....++. +.++..| ++|.|.+|.+... ...-.+.-+.|+++....|
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L-~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDL-EELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCH-HHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 34556666666666655333332 2445566 6666666655421 1112344567888888888
Q ss_pred eeee----eCCccccCCCCCCEEecccCcceec----ccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc
Q 039925 141 SLEG----KFPNTLSNLRSLFYDNINRNEFSGL----IPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL 211 (549)
Q Consensus 141 ~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~ 211 (549)
++.. .+...|...+.|+.+.+..|.|... +...+..++ |+.|||.+|.|+......+...++.+
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~------- 240 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSW------- 240 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhccc-------
Confidence 7752 2234456667788888888776522 224456666 88888888887755544454334332
Q ss_pred cccccccccCcccccEEEccccccccccChhh----hhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCc
Q 039925 212 LAQKLYWSDVSTTATIIAMGGNQISGTITLGI----KKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNN 287 (549)
Q Consensus 212 ~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~----~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N 287 (549)
++|+.|+++++.+...-...| ... .++|+.|.|.+|.++..-...+..++...+.|..|+|++|
T Consensus 241 -----------~~L~El~l~dcll~~~Ga~a~~~al~~~-~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN 308 (382)
T KOG1909|consen 241 -----------PHLRELNLGDCLLENEGAIAFVDALKES-APSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGN 308 (382)
T ss_pred -----------chheeecccccccccccHHHHHHHHhcc-CCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcc
Confidence 257777777777765433322 221 2788888888888763321122344556788888999988
Q ss_pred ccc
Q 039925 288 KLQ 290 (549)
Q Consensus 288 ~l~ 290 (549)
.+.
T Consensus 309 ~l~ 311 (382)
T KOG1909|consen 309 RLG 311 (382)
T ss_pred ccc
Confidence 883
No 338
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.80 E-value=7.6e-09 Score=104.13 Aligned_cols=81 Identities=20% Similarity=0.308 Sum_probs=62.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|.... +.. ++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---ND 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CC
Confidence 45678888999999999999998753 221 2333221 13
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||++ ++|.++++.. .++|..+..++.|++.||+|||
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH 124 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIH 124 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999997 5998888642 5789999999999999999999
No 339
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.80 E-value=1.1e-08 Score=100.84 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=61.7
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|.... +.. .+++.. ....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-----CCeE
Confidence 467888899999999999998753 321 344444 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++ +++.+++.... ...+++.....++.|++.||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH 119 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSP----DFAKNPRLIKTYLYQILRGIAYCH 119 (294)
T ss_pred EEEEeccc-ccHHHHHHhCC----CCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99999996 58888876433 234577778889999999999999
No 340
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.80 E-value=2.1e-09 Score=108.02 Aligned_cols=81 Identities=23% Similarity=0.238 Sum_probs=60.6
Q ss_pred ccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
...-|.+.+.||+|+||.||.|+.. +..+ .|++.. +
T Consensus 24 PEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-----e 98 (948)
T KOG0577|consen 24 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-----E 98 (948)
T ss_pred HHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-----c
Confidence 3445777788999999999999853 2222 344443 5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...+||||||-| |-.|.+.-++ +++..-....|+.|+..||+|||
T Consensus 99 ~TaWLVMEYClG-SAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLH 143 (948)
T KOG0577|consen 99 HTAWLVMEYCLG-SASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLH 143 (948)
T ss_pred chHHHHHHHHhc-cHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHH
Confidence 567899999964 6666665443 46778888899999999999999
No 341
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=4.7e-09 Score=76.50 Aligned_cols=59 Identities=25% Similarity=0.325 Sum_probs=28.5
Q ss_pred CCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecce
Q 039925 82 RLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENS 141 (549)
Q Consensus 82 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 141 (549)
+|++|++++|+++...+..|..+++| ++|++++|.++...+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L-~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNL-ETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTE-SEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCC-CEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444555544442222344444554 555555555544444455555555555555554
No 342
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.79 E-value=1.6e-08 Score=103.69 Aligned_cols=80 Identities=18% Similarity=0.204 Sum_probs=64.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-e-----------------------------eEEEeccccCCCceEEEEEee
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-T-----------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-----------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
..+.|...+.||+|+||.||++...... . .+++.. ....++|+||
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-----~~~~~lv~e~ 164 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTY-----NKFTCLILPR 164 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEE-----CCeeEEEEec
Confidence 4567999999999999999999864322 1 455555 6778999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+. |+|.+++.... .+++...+.++.|+++||+|||
T Consensus 165 ~~-~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH 199 (391)
T PHA03212 165 YK-TDLYCYLAAKR------NIAICDILAIERSVLRAIQYLH 199 (391)
T ss_pred CC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 85 78988887543 5889999999999999999999
No 343
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.77 E-value=1e-09 Score=113.31 Aligned_cols=198 Identities=27% Similarity=0.291 Sum_probs=136.9
Q ss_pred cCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCC
Q 039925 78 GRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLF 157 (549)
Q Consensus 78 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 157 (549)
..+..++.+++..|.+. .+-..+..+++| +.|++.+|+|... ...+..+++|++|++++|.|+..- .+..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l-~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSL-EALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccce-eeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchh
Confidence 45677888889999998 444557888999 9999999999844 333778999999999999998432 466778899
Q ss_pred EEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccc
Q 039925 158 YDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQIS 236 (549)
Q Consensus 158 ~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~ 236 (549)
.|++.+|.+... ..+..+. |+.+++++|.+...-+.... .+ .+++.+++.+|.+.
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~-~~---------------------~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELS-EL---------------------ISLEELDLGGNSIR 199 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhhhh-hc---------------------cchHHHhccCCchh
Confidence 999999998732 3445577 99999999998833221011 22 25666777777765
Q ss_pred cccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccc--cCeeeccCccccccCCccccCCCCCCEEEccCCccc
Q 039925 237 GTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTL--LTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 237 ~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~--L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
.. ..+..+ ..+..+++..|.++..- .+..+.. |+.+++++|.+. ..+..+..+..+..|++.+|++.
T Consensus 200 ~i--~~~~~~--~~l~~~~l~~n~i~~~~------~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 200 EI--EGLDLL--KKLVLLSLLDNKISKLE------GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred cc--cchHHH--HHHHHhhcccccceecc------CcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 32 223333 45555577777776221 2223333 778888888877 44456667777788888877776
Q ss_pred c
Q 039925 315 A 315 (549)
Q Consensus 315 ~ 315 (549)
.
T Consensus 269 ~ 269 (414)
T KOG0531|consen 269 N 269 (414)
T ss_pred c
Confidence 4
No 344
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.76 E-value=1e-08 Score=100.82 Aligned_cols=78 Identities=15% Similarity=0.129 Sum_probs=60.8
Q ss_pred cCcCCCccccCceecEEEEEeC----CCce----------------------------------------eEEEeccccC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILG----EKWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~----------------------------------------~g~~~~~~~~ 431 (549)
+|...+.||+|+||.||++... ++.. .+.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 4667788999999999998863 2221 112222
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|+++||.|||
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH 122 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLH 122 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999997543 5778888889999999999999
No 345
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.76 E-value=1.3e-08 Score=99.46 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=60.8
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|.....||+|+||.||+|+... +.. .+++.. .+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-----ERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----CCceEE
Confidence 4456789999999999999764 222 122322 467899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++ ++|.+++.... ..+++..+..++.++++|++|||
T Consensus 76 v~e~~~-~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH 115 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCH 115 (282)
T ss_pred EecCcC-cCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 999998 59999998642 35899999999999999999999
No 346
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.76 E-value=1.7e-08 Score=100.12 Aligned_cols=86 Identities=16% Similarity=0.241 Sum_probs=62.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEecccc---C
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDF---K 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~---~ 431 (549)
.-++|...+.||+|+||.||+|...+ +.. .++|..... .
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 44568888999999999999998753 221 233333110 0
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||+++ ++.+++.... ..+++.....++.|++.||+|||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH 136 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIH 136 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 12345999999974 8888876532 35889999999999999999999
No 347
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.76 E-value=1e-08 Score=103.24 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=61.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCce
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
.+++|...+.||+|+||.||+|+... +.. .+++....+.....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 45789999999999999999998643 221 12222211112345
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|+||+++ ++.+++... .+++.....++.|+++||+|||
T Consensus 83 ~~lv~e~~~~-~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH 123 (336)
T cd07849 83 VYIVQELMET-DLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIH 123 (336)
T ss_pred EEEEehhccc-CHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999974 787777543 4889999999999999999999
No 348
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.75 E-value=1e-08 Score=98.28 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=41.4
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++++|.+++.... .+++.....++.|+++|+.|||
T Consensus 65 ~~~~~~v~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh 110 (250)
T cd05123 65 EEKLYLVLEYAPGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLH 110 (250)
T ss_pred CCeeEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999997543 5889999999999999999999
No 349
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.74 E-value=9.8e-09 Score=99.46 Aligned_cols=83 Identities=20% Similarity=0.218 Sum_probs=70.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|.-|+||.+++.+... ++.+.. .
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-----~ 149 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-----D 149 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-----c
Confidence 44567778889999999999999987533 455665 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+.++|||||+||+|+...+.+. ...++.....-+|..|.-||+|||
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp----~~~fse~~aRFYaAEvl~ALEYLH 196 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQP----GKRFSESAARFYAAEVLLALEYLH 196 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCC----CCccchhhHHHHHHHHHHHHHHHH
Confidence 89999999999999999988765 567888888889999999999999
No 350
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.74 E-value=3.6e-09 Score=101.83 Aligned_cols=81 Identities=21% Similarity=0.291 Sum_probs=64.3
Q ss_pred cCcCCCccccCceecEEEEEe-CCCce-----------------------------------eEEEeccccCCCceEEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGIL-GEKWT-----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~-----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.|...+.||+|.||.|-+|.- ..|.+ +..+. .+.+.+.+.+|
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE--VFENkdKIviv 131 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE--VFENKDKIVIV 131 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh--hhcCCceEEEE
Confidence 466777899999999999985 33332 11111 13347889999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||..+|.|++|+...+ .++.+...++.+||..|+.|+|
T Consensus 132 MEYaS~GeLYDYiSer~------~LsErEaRhfFRQIvSAVhYCH 170 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG------SLSEREARHFFRQIVSAVHYCH 170 (668)
T ss_pred EEecCCccHHHHHHHhc------cccHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998754 6899999999999999999999
No 351
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.73 E-value=1.3e-08 Score=99.99 Aligned_cols=80 Identities=20% Similarity=0.235 Sum_probs=58.2
Q ss_pred ccCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||++...... . +|++.. +...
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcE
Confidence 46777788999999999999875422 1 343433 5667
Q ss_pred EEEEeecCCCCcccc---cccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDW---PYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~---l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++|||++. ++.++ +.... ...+++.....++.+++.||+|||
T Consensus 79 ~~~~e~~~~-~l~~l~~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 79 WICMELMDI-SLDKFYKYVYEVL----KSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred EEEEecccC-CHHHHHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHh
Confidence 899999874 44443 32211 246889999999999999999998
No 352
>PTZ00284 protein kinase; Provisional
Probab=98.73 E-value=3e-08 Score=104.45 Aligned_cols=82 Identities=18% Similarity=0.343 Sum_probs=63.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~ 430 (549)
..+++|...+.||+|+||.||+|....... ..++..
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~--- 202 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN--- 202 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc---
Confidence 356789999999999999999998743221 111211
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||+ +|+|.+++.... .+++.....|+.||+.||+|||
T Consensus 203 -~~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH 248 (467)
T PTZ00284 203 -ETGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFH 248 (467)
T ss_pred -CCceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 135678999987 778999887543 6899999999999999999999
No 353
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.72 E-value=8.4e-09 Score=113.97 Aligned_cols=125 Identities=22% Similarity=0.329 Sum_probs=62.2
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEeeccccc--ccccCCcc-cccccCccceeeecccccccccccccCCCCCCC
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNH--FSGKIPAN-LSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQ 133 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~--l~~~~p~~-l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~ 133 (549)
...+.+.+-+|.+. .++... .++.|++|-+..|. +. .++.. |..++.| +.|||++|.-.+.+|..++++-+|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~-~is~~ff~~m~~L-rVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLL-RVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhh-hcCHHHHhhCcce-EEEECCCCCccCcCChHHhhhhhhh
Confidence 34455555555444 333322 22345555555554 33 23332 3345555 5555555554445555555555555
Q ss_pred EEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCC
Q 039925 134 VMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPE 186 (549)
Q Consensus 134 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~ 186 (549)
+|+++++.+. .+|..+.++++|.+|++..+.....+|.....+. |++|.+..
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeec
Confidence 5555555555 5555555555555555555544333444444454 55555443
No 354
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.72 E-value=4e-08 Score=97.59 Aligned_cols=83 Identities=22% Similarity=0.330 Sum_probs=63.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|.... +.. .+++.. ...+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCC
Confidence 45678899999999999999998753 222 122221 1124
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++ ++|.+++.... ..+++..+..++.|+++|++|||
T Consensus 82 ~~~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH 125 (309)
T cd07845 82 SIFLVMEYCE-QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLH 125 (309)
T ss_pred eEEEEEecCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 5799999997 48888887532 46899999999999999999999
No 355
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.72 E-value=2.6e-08 Score=102.44 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=62.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc----e-----------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW----T-----------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~----~-----------------------------~g~~~~~~~~~~~~~~lv 439 (549)
....|...+.||+|+||.||++...+.. + ++++.. ....++|
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~~~lv 164 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRW-----KSTVCMV 164 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEee-----CCEEEEE
Confidence 3456888899999999999999764321 1 233433 5678999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+. ++|.+++... ..++|..++.++.|+++||+|||
T Consensus 165 ~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH 202 (392)
T PHA03207 165 MPKYK-CDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLH 202 (392)
T ss_pred ehhcC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99986 6888888432 36899999999999999999999
No 356
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.71 E-value=1.7e-08 Score=99.50 Aligned_cols=31 Identities=6% Similarity=-0.058 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 039925 507 DCLVSVLTIGILCSVESPSERMEKPYIVSKL 537 (549)
Q Consensus 507 ~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L 537 (549)
.++.++.+++..||..+|++||++.++.+.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 263 NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 3456688999999999999999999998876
No 357
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.70 E-value=1.2e-08 Score=103.06 Aligned_cols=86 Identities=13% Similarity=0.138 Sum_probs=63.1
Q ss_pred ccccccCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEecccc-C
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDF-K 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~-~ 431 (549)
|...++|...+.||+|+||.||+|+...+. . .+++...+. .
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 466788999999999999999999985432 1 011111000 0
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++|+||+ +++|.+++... .+++.....++.|+++|++|||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH 135 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIH 135 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 012378999998 56999988742 4899999999999999999999
No 358
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.70 E-value=3e-08 Score=99.25 Aligned_cols=82 Identities=15% Similarity=0.196 Sum_probs=68.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|....+||+|+||.||.|+.++ |.+ +..+.+
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD----- 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD----- 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-----
Confidence 567899999999999999999999754 444 233444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+.+||||||.|||++..+|.... .|+.....-++.+.+-|++-+|
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999998765 6777777778889999999999
No 359
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.70 E-value=6.2e-08 Score=96.41 Aligned_cols=48 Identities=25% Similarity=0.167 Sum_probs=41.6
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..+++|||+++|+|.++++... ...+++.....++.|+++||+|||
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~LH 118 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHF----PEGLPELAIAFILKDVLNALDYIH 118 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999998643 235788888899999999999999
No 360
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.69 E-value=2.6e-08 Score=101.33 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=65.4
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|.... +.. ++.+.. ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 478888999999999999998653 221 233444 667
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH 118 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIH 118 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5889999999999999999999
No 361
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.69 E-value=4.1e-08 Score=99.79 Aligned_cols=83 Identities=16% Similarity=0.104 Sum_probs=58.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~~~ 433 (549)
..++|...+.||+|+||.||++.... +.. ++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 45678888999999999999998643 221 22222100 0011
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++ ++.+.++. .+++.....++.|+++||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH 140 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLH 140 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999975 56665542 3678888889999999999999
No 362
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.69 E-value=1.9e-08 Score=102.60 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=66.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||++....... ++++..
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~----- 114 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD----- 114 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----
Confidence 466899999999999999999998754321 233444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++.. .++......++.|++.||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH 159 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIH 159 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999998753 3677778889999999999999
No 363
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.69 E-value=1.9e-08 Score=101.54 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=63.0
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FK 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~ 431 (549)
|...+.|...+.||+|+||.||+|.... +.. .+++.... ..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 5677889999999999999999998642 221 12221100 00
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||+ +++|.+++... .+++.....++.|+++||+|||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH 135 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIH 135 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 012458999998 77998887643 4889999999999999999999
No 364
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.69 E-value=2.2e-08 Score=100.67 Aligned_cols=84 Identities=17% Similarity=0.174 Sum_probs=62.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|.... +.. .+++.. ......
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~~ 81 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRP-PGADFK 81 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccc-cCCCCc
Confidence 34788888999999999999998643 222 011110 001134
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++ |+|.+++.... .+++.....++.|+++||+|||
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH 124 (334)
T cd07855 82 DVYVVMDLME-SDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIH 124 (334)
T ss_pred eEEEEEehhh-hhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 6789999996 68999987543 5899999999999999999999
No 365
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.68 E-value=5.8e-08 Score=96.74 Aligned_cols=81 Identities=21% Similarity=0.233 Sum_probs=56.9
Q ss_pred CCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 400 SNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
+..||+|+||.||+|+..++.. .+++.. ......++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEeee
Confidence 4579999999999999754321 233322 1145678999998
Q ss_pred CCCCcccccccCC---CCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSN---NKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~---~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++ +|.+++.... .......+++.....++.|+++||.|||
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH 125 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH 125 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 75 7777765321 0011235788888999999999999999
No 366
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.67 E-value=2e-08 Score=102.71 Aligned_cols=79 Identities=14% Similarity=0.169 Sum_probs=65.6
Q ss_pred ccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
+-|..++.||+|+.|.|-.|+.. +|+. +.+. .....
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQH 86 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCce
Confidence 45778889999999999998853 3332 2223 33788
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+|.||+++|.|.+++..++ ++..+...++..||..|+.|+|
T Consensus 87 lylvlEyv~gGELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH 129 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYLVRKG------PLPEREAAHFFRQILDGVSYCH 129 (786)
T ss_pred EEEEEEecCCchhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999765 7889999999999999999999
No 367
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.67 E-value=3.3e-08 Score=99.32 Aligned_cols=80 Identities=19% Similarity=0.139 Sum_probs=65.6
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+++..+... .+++.. .+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-----ENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----CCE
Confidence 467788899999999999999864332 233444 677
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ..+++.....++.|++.||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH 119 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVH 119 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997533 35888888899999999999999
No 368
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.67 E-value=3.2e-08 Score=99.32 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=65.1
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+++...... .+++.. .+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 467888899999999999998754321 233334 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ..+++.....++.|++.||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH 119 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIH 119 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998632 35788888899999999999999
No 369
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.66 E-value=4.7e-08 Score=99.17 Aligned_cols=83 Identities=16% Similarity=0.089 Sum_probs=59.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc--e------------------------------------eEEEeccc-cCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW--T------------------------------------AGYSEGTD-FKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~------------------------------------~g~~~~~~-~~~~ 433 (549)
..++|...+.||+|+||.||++...... + ++++.... ....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568888899999999999999754221 1 23332210 0112
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++ ++.+++.. .+++.....++.|+++||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH 136 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLH 136 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999975 56666542 3778888899999999999999
No 370
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.66 E-value=5.7e-08 Score=94.05 Aligned_cols=81 Identities=19% Similarity=0.284 Sum_probs=62.7
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccCCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~~~ 433 (549)
.+|...+.||+|+||.||+|.... +.. .+++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 478889999999999999998643 211 2322220 13
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++|+||+++|+|.+++.... .+++....+++.+++.|+.|||
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH 123 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLH 123 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999987543 4788888999999999999999
No 371
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.65 E-value=4.1e-08 Score=100.62 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=64.3
Q ss_pred cCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCceE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.|...+.||+|+||.||+|+...... ++++.. .+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-----~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-----KDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-----CCEE
Confidence 57778899999999999998744321 345554 6789
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH 118 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVH 118 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997543 5788888889999999999999
No 372
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.65 E-value=3.4e-08 Score=100.57 Aligned_cols=79 Identities=14% Similarity=0.233 Sum_probs=65.8
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+... +.. ++++.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-----ENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCe
Confidence 468888999999999999998753 222 344444 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH 118 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIH 118 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997543 5889999999999999999999
No 373
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=5.9e-08 Score=97.78 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=64.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce-----------------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT-----------------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-----------------------------------------~g~~~~~~ 429 (549)
...+.|...+.||+|+||.||.|..... .. +.+...
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t-- 91 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT-- 91 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec--
Confidence 3456788999999999999999975321 11 112222
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++..++ ++......++..|++.|++|+|
T Consensus 92 ---~~~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H 137 (370)
T KOG0583|consen 92 ---PTKIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCH 137 (370)
T ss_pred ---CCeEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999999743 6778888899999999999999
No 374
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.65 E-value=7.2e-08 Score=96.95 Aligned_cols=45 Identities=18% Similarity=0.216 Sum_probs=38.8
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||++ |+|.+++.... .+++.....++.|++.||+|||
T Consensus 92 ~~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH 136 (335)
T PTZ00024 92 GDFINLVMDIMA-SDLKKVVDRKI------RLTESQVKCILLQILNGLNVLH 136 (335)
T ss_pred CCcEEEEEeccc-cCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999997 69999987543 5788889999999999999999
No 375
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.64 E-value=3.5e-08 Score=99.58 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=62.2
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FK 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~ 431 (549)
|...+.|...+.||+|+||.||+|.... +.. ++++.... ..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 4566789999999999999999998643 221 11111100 00
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++++||+ +++|.++++.. .+++.....++.|+++||+|||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH 135 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIH 135 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 123468999987 78998887643 4889999999999999999999
No 376
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.64 E-value=1.1e-07 Score=95.23 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=62.5
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~ 432 (549)
+..+++|...+.||+|+||.||+|.... +.. .+++.. .
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~ 81 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS----P 81 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----C
Confidence 3678889999999999999999997542 211 233322 1
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++|+||+ +++|.++++.. ++++.....++.|+++||.|||
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH 125 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVH 125 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 34678999998 56898887643 4777778889999999999999
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.62 E-value=4.8e-08 Score=93.00 Aligned_cols=46 Identities=11% Similarity=-0.031 Sum_probs=41.4
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 57 ~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH 102 (237)
T cd05576 57 EDSVFLVLQHAEGGKLWSHISKFL------NIPEECVKRWAAEMVVALDALH 102 (237)
T ss_pred CCeEEEEEecCCCCCHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999987543 4889999999999999999999
No 378
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.62 E-value=4.4e-08 Score=104.66 Aligned_cols=93 Identities=23% Similarity=0.225 Sum_probs=62.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-----cee--------------------------------EEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-----WTA--------------------------------GYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-----~~~--------------------------------g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|++.+. ..+ ++..........
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCC
Confidence 4678899999999999999999998654 110 000000002256
Q ss_pred eEEEEEeecCCCCcccccccCCCCC--------------CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKL--------------KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~--------------~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|+++++...... ............++.|+++||+|||
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH 272 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH 272 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999987542000 0001112234578999999999999
No 379
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.62 E-value=6.2e-08 Score=99.13 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=64.5
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||++.... +.. ++++.. ...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-----AQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCe
Confidence 467888999999999999998643 221 344444 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH 118 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVH 118 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997543 5778888889999999999999
No 380
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.62 E-value=4e-08 Score=98.55 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=59.8
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
|...+.||+|+||.||+|...+ +.. .+++...........++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 6677889999999999999754 222 12222200001136799
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++ ++|.++++.. ..+++..+..++.++++||+|||
T Consensus 82 v~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~~l~~~l~~LH 120 (330)
T cd07834 82 VTELME-TDLHKVIKSP------QPLTDDHIQYFLYQILRGLKYLH 120 (330)
T ss_pred Eecchh-hhHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999998 5898888753 26899999999999999999999
No 381
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.61 E-value=8.9e-08 Score=97.47 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=59.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc--e------------------------------------eEEEeccc-cCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW--T------------------------------------AGYSEGTD-FKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~------------------------------------~g~~~~~~-~~~ 432 (549)
...++|...+.||+|+||.||++...... + .+++...+ ...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 34567888899999999999999864321 1 12222100 011
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++ ++.+++.. .+++.+...++.|+++||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH 143 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLH 143 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHh
Confidence 2357999999975 67776642 3778888899999999999999
No 382
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.61 E-value=6.5e-08 Score=98.30 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=64.9
Q ss_pred ccCcCCCccccCceecEEEEEeCCC-ce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEK-WT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||++..... .. ++.+.. .+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-----~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-----KRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 4678888999999999999987542 21 233433 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH 118 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIH 118 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5888888999999999999999
No 383
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.61 E-value=6.2e-08 Score=97.23 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=65.0
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+++... +.. .+++.. .+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-----ENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-----CCe
Confidence 467788899999999999998753 222 233444 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... ..+++.....++.|++.||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 119 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVH 119 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997532 35788888899999999999999
No 384
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=98.60 E-value=4.1e-08 Score=91.44 Aligned_cols=84 Identities=17% Similarity=0.237 Sum_probs=58.4
Q ss_pred ccCcCCCccccCceecEEEEEeCC-CceeEE--Eecc------------------------------ccCCCceEEEEEe
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWTAGY--SEGT------------------------------DFKGIDFKAVVFD 441 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~~g~--~~~~------------------------------~~~~~~~~~lv~e 441 (549)
+.|..-..+|+|+||+|||++-++ |.+.+. +.+. .+++.....||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 345666789999999999999765 443111 1100 0234667899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+..-=|.+.-+ . ...++.....+++.|+++|+.|+|
T Consensus 82 ~~dhTvL~eLe~-~-----p~G~~~~~vk~~l~Q~l~ai~~cH 118 (396)
T KOG0593|consen 82 YCDHTVLHELER-Y-----PNGVPSELVKKYLYQLLKAIHFCH 118 (396)
T ss_pred ecchHHHHHHHh-c-----cCCCCHHHHHHHHHHHHHHhhhhh
Confidence 999854444433 2 234777788899999999999999
No 385
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.59 E-value=4.7e-07 Score=90.18 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=56.3
Q ss_pred CCccccCceecEEEEEeCCCc---e---------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 400 SNMIGQGSFGSVYKGILGEKW---T---------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~~~---~---------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
+..||+|+||.||+|+..++. . .+++.. ......++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEecc
Confidence 468999999999999875422 1 222221 1145678999998
Q ss_pred CCCCcccccccCCC---CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNN---KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~---~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+ ++|.+++..... ......+++.....++.|++.||+|||
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 125 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 125 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 6 478777653220 011235788888999999999999999
No 386
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.59 E-value=8.7e-08 Score=98.02 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=63.9
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+... +.. ++.+.. .+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-----KDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCE
Confidence 367788899999999999998643 221 233444 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .++......++.|++.||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH 118 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVH 118 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5777777889999999999999
No 387
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.58 E-value=8.6e-08 Score=98.28 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=63.7
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCCceE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.|...+.||+|+||.||+|+..... . ++++.. .+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-----~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-----KDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-----CCEE
Confidence 5777889999999999999874322 1 344554 6789
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH 118 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVH 118 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997543 5777778889999999999999
No 388
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.57 E-value=1.3e-07 Score=95.28 Aligned_cols=83 Identities=16% Similarity=0.212 Sum_probs=59.3
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEecc---------
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGT--------- 428 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~--------- 428 (549)
...|...+.||+|+||.||+|.... +.. .+++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 3568888899999999999998753 222 0111100
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
........++||||++ ++|.+++... .+++.....++.|+++||.|||
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH 131 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIH 131 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 0000135689999997 5888887532 4788899999999999999999
No 389
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.57 E-value=8.5e-08 Score=97.70 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=66.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+++..... . .+++..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~----- 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD----- 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 46678999999999999999999975432 1 233444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+...++||||+++|+|.++++.. .+++.....++.|++.||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH 159 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIH 159 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999998743 3677888889999999999999
No 390
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.56 E-value=1.5e-07 Score=94.85 Aligned_cols=80 Identities=19% Similarity=0.224 Sum_probs=66.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~ 432 (549)
....|...+.||+|.||.||+++.+. |.. .+++..
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~----- 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED----- 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-----
Confidence 45567778999999999999999765 322 344444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++|||++.+|.|.+.+... .++......++.+++.|+.|||
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH 152 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLH 152 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999854 2888899999999999999999
No 391
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.56 E-value=1.4e-07 Score=87.89 Aligned_cols=90 Identities=17% Similarity=0.237 Sum_probs=69.7
Q ss_pred ccccccCcCC-CccccCceecEEEEEeCCCce---------------------------eEEE----eccccCCCceEEE
Q 039925 391 STVTNEFSSS-NMIGQGSFGSVYKGILGEKWT---------------------------AGYS----EGTDFKGIDFKAV 438 (549)
Q Consensus 391 ~~~~~~~~~~-~~lG~G~~g~Vy~~~~~~~~~---------------------------~g~~----~~~~~~~~~~~~l 438 (549)
...|++|+.. ++||-|-.|.|..+..+.... .-++ .+..+.+.....+
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi 136 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI 136 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence 3678888754 479999999999988643222 0001 1112445778899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||.|+||.|..-++.++ ...++.++.-.|..||+.|+.|||
T Consensus 137 VmE~meGGeLfsriq~~g----~~afTErea~eI~~qI~~Av~~lH 178 (400)
T KOG0604|consen 137 VMECMEGGELFSRIQDRG----DQAFTEREASEIMKQIGLAVRYLH 178 (400)
T ss_pred eeecccchHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998765 567999999999999999999999
No 392
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.55 E-value=1.7e-07 Score=92.42 Aligned_cols=87 Identities=22% Similarity=0.187 Sum_probs=63.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------------------eEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------------AGY 424 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------------~g~ 424 (549)
..-+.|.....||+|.||.|-+|+... +.. +-.
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 456789999999999999999998643 322 000
Q ss_pred EeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 425 SEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 425 ~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..-.+.+..+..|||+|||..|.+...=... ..++..+..+|.++|..||+|||
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH 227 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLH 227 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHH
Confidence 1111223467789999999999876543321 23888999999999999999999
No 393
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.55 E-value=1.2e-07 Score=94.20 Aligned_cols=86 Identities=17% Similarity=0.228 Sum_probs=61.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccc---cC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTD---FK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~---~~ 431 (549)
..++|...+.||+|+||.||+|+..... . .+.+.... ..
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 3678999999999999999999975322 1 11111100 00
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||++. ++.+.+.... ..+++.+...++.|+++||+|||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH 132 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLH 132 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 12346899999875 6766665432 46899999999999999999999
No 394
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.53 E-value=2.4e-08 Score=95.55 Aligned_cols=88 Identities=20% Similarity=0.315 Sum_probs=59.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc--e------------------------------eEEEeccccCC-CceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW--T------------------------------AGYSEGTDFKG-IDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~------------------------------~g~~~~~~~~~-~~~~~lv 439 (549)
.+-.|...+++|+|+||.||+|...... + .-++.. .... +-...+|
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~-~~~~d~~~lnlV 100 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSS-STESDEVYLNLV 100 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEe-cCCCchhHHHHH
Confidence 3445677889999999999999975432 2 112221 1111 2356799
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||||. +|+.+++... ..+..++--...-+..|+.+||.|||
T Consensus 101 leymP~-tL~~~~r~~~--~~~~~mp~~~iKLYt~Qlfrgl~yLh 142 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYT--RANQRMPLLEIKLYTYQLFRGLAYLH 142 (364)
T ss_pred HHhchH-HHHHHHHHHh--hcCCCCceeeeHHHHHHHHHHHHHHH
Confidence 999998 9999988421 01234555555668899999999999
No 395
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=98.53 E-value=3.5e-08 Score=99.08 Aligned_cols=83 Identities=28% Similarity=0.304 Sum_probs=63.1
Q ss_pred ccCcCCCccccCceecEEEEEeCCCceeEEEecc---------------------------------ccCCCceEEEEEe
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWTAGYSEGT---------------------------------DFKGIDFKAVVFD 441 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~g~~~~~---------------------------------~~~~~~~~~lv~e 441 (549)
++|..-+.||+|+||.||||+.++...+-++..+ .|....+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4666778899999999999987543320000000 0222567899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+.+ +|..+|...+ .++......|+.+...||.|||
T Consensus 82 ~a~g-~L~~il~~d~------~lpEe~v~~~a~~LVsaL~yLh 117 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG------KLPEEQVRAIAYDLVSALYYLH 117 (808)
T ss_pred hhhh-hHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9987 9999998654 6888999999999999999999
No 396
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.53 E-value=2.1e-07 Score=92.57 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=59.8
Q ss_pred CcCCCccccCceecEEEEEeCC---Cce--------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE---KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~---~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||+|.... +.. .+++.. ..+..
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 78 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADKS 78 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCce
Confidence 5566789999999999999854 111 344443 11267
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++ ++.+++..... .....++......++.|++.|++|||
T Consensus 79 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH 125 (316)
T cd07842 79 VYLLFDYAEH-DLWQIIKFHRQ-AKRVSIPPSMVKSLLWQILNGVHYLH 125 (316)
T ss_pred EEEEEeCCCc-CHHHHHHhhcc-CCCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 8999999985 67776653321 01236788888999999999999999
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.52 E-value=1.6e-07 Score=88.99 Aligned_cols=46 Identities=26% Similarity=0.224 Sum_probs=40.9
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++++||+++|+|.+++.... .+++..+..++.++++|+.|||
T Consensus 59 ~~~~~l~~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh 104 (244)
T smart00220 59 EDKLYLVMEYCDGGDLFDLLKKRG------RLSEDEARFYARQILSALEYLH 104 (244)
T ss_pred CCEEEEEEeCCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999987643 3889999999999999999999
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.51 E-value=6.3e-07 Score=82.72 Aligned_cols=72 Identities=26% Similarity=0.397 Sum_probs=57.4
Q ss_pred cccCceecEEEEEeCC-Cc-e-----------------------------------eEEEeccccCCCceEEEEEeecCC
Q 039925 403 IGQGSFGSVYKGILGE-KW-T-----------------------------------AGYSEGTDFKGIDFKAVVFDYMQN 445 (549)
Q Consensus 403 lG~G~~g~Vy~~~~~~-~~-~-----------------------------------~g~~~~~~~~~~~~~~lv~ey~~~ 445 (549)
||+|++|.||++...+ +. + .+++.. ....++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-----ENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-----CCeEEEEEecCCC
Confidence 6899999999999863 22 1 222222 3578999999999
Q ss_pred CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 446 RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 446 GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|.+++.... ..+++..+..++.++++++.|||
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh 109 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLH 109 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999987642 35889999999999999999999
No 399
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.50 E-value=1.3e-07 Score=89.43 Aligned_cols=87 Identities=17% Similarity=0.231 Sum_probs=64.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------eE----------------------EEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------AG----------------------YSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------~g----------------------~~~~~~~~~~~~~ 436 (549)
+.-++|...+.|++|.||.||+|+... +.+ .| +-.-.....-+.+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 345678888999999999999998643 332 00 0000001113568
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|||||++ +|..++...+ +++...+..-+..|+.+|++|||
T Consensus 153 y~VMe~~Eh-DLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH 194 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLH 194 (419)
T ss_pred eeeHHHHHh-hHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHh
Confidence 999999997 8888888654 67888888889999999999999
No 400
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.49 E-value=3.1e-08 Score=90.79 Aligned_cols=46 Identities=26% Similarity=0.295 Sum_probs=42.6
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..+.++|+|.|+.|.|.|+|...- +++.+...+|++|+-+|++|||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylH 140 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLH 140 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998754 7899998999999999999999
No 401
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.48 E-value=4.3e-07 Score=92.04 Aligned_cols=84 Identities=17% Similarity=0.107 Sum_probs=59.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~~ 432 (549)
...+.|...+.||+|+||.||+|.... +.. .+++.... ...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 345678888999999999999998642 221 22222100 011
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||++ |+|.+.+.. .+++.....++.|+++||+|||
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH 135 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLH 135 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHH
Confidence 235689999996 588877752 2778888899999999999999
No 402
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.47 E-value=1.8e-07 Score=94.38 Aligned_cols=85 Identities=18% Similarity=0.189 Sum_probs=59.5
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FK 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~ 431 (549)
|+..++|...+.||+|+||.||+|+... +.. .+++.... ..
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 11 WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD 90 (342)
T ss_pred hccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC
Confidence 4556789889999999999999998643 222 12222100 00
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++|+||++. ++..+.. ..+++.....++.|+++||+|||
T Consensus 91 ~~~~~~lv~e~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH 134 (342)
T cd07879 91 EFQDFYLVMPYMQT-DLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIH 134 (342)
T ss_pred CCceEEEEeccccc-CHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 11345899999874 6665542 24788889999999999999999
No 403
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.47 E-value=2.9e-07 Score=92.47 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=58.0
Q ss_pred CcCCCccccCceecEEEEEeCCC--c--e-------------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEK--W--T-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~--~--~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||++..... . + .+.+.. .......
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~~~ 80 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIV-FPGNFNE 80 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeee-ccccCCc
Confidence 56677899999999999998644 1 1 111110 0011234
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++++||++ ++|.+++... ..+++.....++.|++.||+|||
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH 122 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG------QPLTDAHFQSFIYQILCGLKYIH 122 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678888886 6899988653 36889999999999999999999
No 404
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=6.4e-08 Score=104.66 Aligned_cols=82 Identities=20% Similarity=0.184 Sum_probs=63.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
--.+||...++||+|+||.|..++.+. +.+ +.++.+
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD----- 146 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD----- 146 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC-----
Confidence 467799999999999999999998754 333 122344
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+.+.|+||||||||+|-.++.... +++..+..-++..|..|+.-+|
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH 192 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLH 192 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999998653 4555555567777888888777
No 405
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.41 E-value=3.8e-07 Score=89.56 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=71.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...+.|+.-++||+||||.||-++.+. |+. +-+|....+...+..+
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 455678899999999999999988654 332 2233333344478999
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+..|.||+|.=+|...+ ...++..+.+-+|.+|+-||++||
T Consensus 262 lVLtlMNGGDLkfHiyn~g----~~gF~e~ra~FYAAEi~cGLehlH 304 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHG----NPGFDEQRARFYAAEIICGLEHLH 304 (591)
T ss_pred EEEEeecCCceeEEeeccC----CCCCchHHHHHHHHHHHhhHHHHH
Confidence 9999999999999998765 467999999999999999999999
No 406
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.40 E-value=4.5e-07 Score=93.29 Aligned_cols=79 Identities=19% Similarity=0.261 Sum_probs=65.5
Q ss_pred cCcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEeccccCCCc
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~~~~~ 434 (549)
.|...++||+|.||.|.||...+... +.++.. +.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-----r~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-----RN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-----cc
Confidence 56778899999999999999765332 455555 78
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+.|||+|.+.. +|+++|+..+ -..++......|+.||+.||.+||
T Consensus 262 HlciVfELL~~-NLYellK~n~----f~Glsl~~ir~~~~Qil~~L~~L~ 306 (586)
T KOG0667|consen 262 HLCIVFELLST-NLYELLKNNK----FRGLSLPLVRKFAQQILTALLFLH 306 (586)
T ss_pred ceeeeehhhhh-hHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998765 9999999765 345888888999999999999999
No 407
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.40 E-value=2e-07 Score=102.26 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=64.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
..+-.|..+..||.|.||.||-|.-.+ |.. +|+-.+ +
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-----R 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-----R 1306 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-----H
Confidence 456677788899999999999998543 332 455445 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..+|.||||++|+|.+.+.... ..+......+..|++.|++|||
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gr------i~dE~vt~vyt~qll~gla~LH 1351 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGR------IEDEMVTRVYTKQLLEGLAYLH 1351 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcc------hhhhhHHHHHHHHHHHHHHHHH
Confidence 67889999999999999998543 4555555668899999999999
No 408
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.39 E-value=3.6e-07 Score=92.24 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=62.6
Q ss_pred ccccccCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccc-cC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTD-FK 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~-~~ 431 (549)
|.++++|...+.||+|+||.||+|... ++.. .+++.... ..
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence 578899999999999999999999854 2322 12221100 00
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....+++++|+ +++|.++++.. .+++..+..++.|+++|++|||
T Consensus 93 ~~~~~~lv~~~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH 137 (345)
T cd07877 93 EFNDVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIH 137 (345)
T ss_pred ccccEEEEehhc-ccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 123467788876 78998887643 4889999999999999999999
No 409
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.39 E-value=3e-07 Score=92.36 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=61.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
-...|...+.||+||...||++.-.+..+ +.|-.. ++
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d~ 433 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----DG 433 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----Cc
Confidence 34467888899999999999998766554 222222 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+|+|||| ..-+|..+|+.+. .....| .+..+-.|+..|+.|+|
T Consensus 434 ~lYmvmE~-Gd~DL~kiL~k~~----~~~~~~-~lk~ywkqML~aV~~IH 477 (677)
T KOG0596|consen 434 YLYMVMEC-GDIDLNKILKKKK----SIDPDW-FLKFYWKQMLLAVKTIH 477 (677)
T ss_pred eEEEEeec-ccccHHHHHHhcc----CCCchH-HHHHHHHHHHHHHHHHH
Confidence 89999998 4559999998765 234456 45568899999999999
No 410
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.39 E-value=4.7e-07 Score=99.25 Aligned_cols=79 Identities=20% Similarity=0.240 Sum_probs=64.5
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cc-e-------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KW-T-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~-~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|.... +. + ++++.. ...
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-----ANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-----CCE
Confidence 578888999999999999999762 22 1 233333 567
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .+++.....|+.||+.||+|||
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH 121 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLH 121 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997543 5788888999999999999999
No 411
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.34 E-value=5.3e-07 Score=94.22 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=39.7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCC------------------CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKL------------------KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~------------------~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.++++...... ....++|.....++.|+++||+|||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH 326 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLH 326 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999997532100 1123567788899999999999999
No 412
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.34 E-value=2.1e-07 Score=101.49 Aligned_cols=44 Identities=9% Similarity=0.135 Sum_probs=35.4
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCC-chhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSL-SMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l-~~~~~~~ia~~va~gl~yLH 484 (549)
..||=||||+.-.++++++... .. .-...+++.++|++|++|+|
T Consensus 670 ~LYIQMEyCE~~ll~~iI~~N~------~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 670 ILYIQMEYCEKTLLRDIIRRNH------FNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred EEEEEHhhhhhhHHHHHHHhcc------cchhhHHHHHHHHHHHHHHHHHH
Confidence 4688899999999999998654 11 23445789999999999999
No 413
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.34 E-value=7.6e-07 Score=94.43 Aligned_cols=84 Identities=12% Similarity=0.146 Sum_probs=58.2
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc----------------e------------------------------------
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW----------------T------------------------------------ 421 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~----------------~------------------------------------ 421 (549)
.++|...+.||+|+||.||++.++... .
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 467888899999999999998653210 0
Q ss_pred --eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 --AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 --~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.. .+..++|+||+. +++.+++...... ............|+.|++.||+|||
T Consensus 227 ~l~~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~i~~ql~~aL~yLH 284 (501)
T PHA03210 227 KIEEILRS-----EANTYMITQKYD-FDLYSFMYDEAFD-WKDRPLLKQTRAIMKQLLCAVEYIH 284 (501)
T ss_pred cEeEEEEE-----CCeeEEEEeccc-cCHHHHHhhcccc-ccccccHHHHHHHHHHHHHHHHHHH
Confidence 455555 667899999875 5777776543200 0112234456689999999999999
No 414
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.32 E-value=1.4e-08 Score=104.68 Aligned_cols=126 Identities=22% Similarity=0.257 Sum_probs=100.4
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccc-ccCCCCCCCEE
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLD-FIGNPSAIQVM 135 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~-~~~~l~~L~~L 135 (549)
..|.+.+.++|.+. .+-.++.-++.|+.|+|++|+++. +. .+..|++| ++|||++|.+. .+|. ....+. |+.|
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~L-khLDlsyN~L~-~vp~l~~~gc~-L~~L 237 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKL-KHLDLSYNCLR-HVPQLSMVGCK-LQLL 237 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccc-cccccccchhc-cccccchhhhh-heee
Confidence 46788899999998 666788888999999999999983 43 78899999 99999999998 4443 233334 9999
Q ss_pred EeecceeeeeCCccccCCCCCCEEecccCcceeccc-ccccccc-cceeeCCCCcCc
Q 039925 136 IFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIP-SFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 136 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~-L~~L~l~~n~l~ 190 (549)
.|++|.++.. ..+.++.+|+.||+++|-+.+... ..+..+. |+.|+|.+|.+-
T Consensus 238 ~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 238 NLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred eecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9999999833 357889999999999998875322 2345666 999999999885
No 415
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.29 E-value=4.1e-07 Score=93.35 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=66.9
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce-----------------------eEEEecc-------ccCCCceEEEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-----------------------AGYSEGT-------DFKGIDFKAVVF 440 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-----------------------~g~~~~~-------~~~~~~~~~lv~ 440 (549)
...++|.....+|.|.||.|||++.. .+.. .-.|.+. .|...+..++.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 56778998999999999999999853 2221 0111111 023366789999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+.+|+|.+.-+.. .+++.-+...+++...+|++|||
T Consensus 92 EycgggslQdiy~~T------gplselqiayvcRetl~gl~ylh 129 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLH 129 (829)
T ss_pred EecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhh
Confidence 999999999998854 47888888899999999999999
No 416
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=2.1e-08 Score=93.13 Aligned_cols=56 Identities=23% Similarity=0.305 Sum_probs=26.0
Q ss_pred CCEeecccccccc-cCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 83 LEYLLLANNHFSG-KIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 83 L~~L~Ls~n~l~~-~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
|++||||...|+. .+-.-+..|.+| +.|.|.++++.+.+...+.+-.+|+.|+|+.
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kL-k~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm 243 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKL-KNLSLEGLRLDDPIVNTIAKNSNLVRLNLSM 243 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhh-hhccccccccCcHHHHHHhccccceeecccc
Confidence 4555555544441 111223444455 5555555555444444444445555555544
No 417
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.28 E-value=1e-06 Score=91.23 Aligned_cols=87 Identities=22% Similarity=0.281 Sum_probs=64.7
Q ss_pred ccCcCCCccccCceecEEEEEeC-CCce---------------------------------eEEEeccccC----CCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG-EKWT---------------------------------AGYSEGTDFK----GIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~---------------------------------~g~~~~~~~~----~~~~~ 436 (549)
..|...+.||+||||.||+|+-+ .|.. +.++...+-. ..+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 34566778999999999999943 3432 1112111111 14567
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+|||||++|||++.|.+-. -...++....+.+..+++.||.|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PE---N~~GLpE~e~l~lL~d~~~al~~Lr 137 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPE---NAYGLPESEFLDLLSDLVSALRHLR 137 (732)
T ss_pred eEEEeecCCCcHHHHhcCcc---cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998654 2456899999999999999999999
No 418
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.26 E-value=1.8e-07 Score=87.07 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=34.2
Q ss_pred ceeeeccccccc--ccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceec-ccccccccc-cceeeC
Q 039925 109 TKLFICETHLSG--QLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGL-IPSFIFNIS-LKWNFL 184 (549)
Q Consensus 109 ~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~-L~~L~l 184 (549)
+.|||.+|.|+. .+...+.+||.|++|+|+.|++...+-..-..+.+|+.|-|.+..+.-. ....+..++ ++.|.+
T Consensus 74 ~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHm 153 (418)
T KOG2982|consen 74 KELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHM 153 (418)
T ss_pred hhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhh
Confidence 445555555442 1223344555555555555555422211112344555555555444321 112233444 555555
Q ss_pred CCC
Q 039925 185 PEN 187 (549)
Q Consensus 185 ~~n 187 (549)
+.|
T Consensus 154 S~N 156 (418)
T KOG2982|consen 154 SDN 156 (418)
T ss_pred ccc
Confidence 555
No 419
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.26 E-value=4.5e-08 Score=80.64 Aligned_cols=105 Identities=19% Similarity=0.287 Sum_probs=61.9
Q ss_pred CCCEEEccCCcceecCCc---cccCCCCCCEeecccccccccCCcccccc-cCccceeeecccccccccccccCCCCCCC
Q 039925 58 YLRFINLVDNNFRGEIPE---KVGRLFRLEYLLLANNHFSGKIPANLSHC-SNLLTKLFICETHLSGQLLDFIGNPSAIQ 133 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~---~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l-~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~ 133 (549)
.+..++|+.|.+- .+++ .+.....|...+|++|.+. .+|+.|... +.+ +.|++++|.|. .+|..+..++.|+
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~-t~lNl~~neis-dvPeE~Aam~aLr 103 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTA-TTLNLANNEIS-DVPEELAAMPALR 103 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchh-hhhhcchhhhh-hchHHHhhhHHhh
Confidence 3455667766654 3333 3344455666677777776 566555433 344 66666666665 4455566666666
Q ss_pred EEEeecceeeeeCCccccCCCCCCEEecccCcce
Q 039925 134 VMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFS 167 (549)
Q Consensus 134 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 167 (549)
.|+++.|.+. ..|..+..+.+|..|+..+|.+.
T Consensus 104 ~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 104 SLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 6666666666 55555555666666666666554
No 420
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.22 E-value=3.5e-08 Score=101.86 Aligned_cols=121 Identities=15% Similarity=0.114 Sum_probs=59.0
Q ss_pred ceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccc-cccccccceeeCCCC
Q 039925 109 TKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPS-FIFNISLKWNFLPEN 187 (549)
Q Consensus 109 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~L~~L~l~~n 187 (549)
...+.++|.+. .+..++.-++.|+.|||++|+++.. +.+..+++|++|||+.|.+. .+|. ...+..|+.|.+++|
T Consensus 167 ~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN 242 (1096)
T KOG1859|consen 167 ATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNN 242 (1096)
T ss_pred hhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhhheeeeeccc
Confidence 44555555554 3334444455666666666666522 24555666666666666655 2332 122222666666666
Q ss_pred cCcccCchhhhhcCCCCcEeeecc----cccccccccCcccccEEEccccccc
Q 039925 188 SFTGNLPLEIGVTLPKGRNYYILL----LAQKLYWSDVSTTATIIAMGGNQIS 236 (549)
Q Consensus 188 ~l~~~~p~~~~~~l~~L~~L~l~~----~~~~l~~l~~~~~L~~L~l~~n~l~ 236 (549)
.++ .+- .+. ++.+|+.||++. ....+..+.....|+.|+|.+|.+-
T Consensus 243 ~l~-tL~-gie-~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 243 ALT-TLR-GIE-NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HHH-hhh-hHH-hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 554 111 122 445555555444 2223333333345566666666553
No 421
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.21 E-value=2e-06 Score=85.76 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=64.8
Q ss_pred cccccCcCCCccccCceecEEEEEe--CCCce------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGIL--GEKWT------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~------------------------------------~g~~~~~~~~~~ 433 (549)
...+=|+.++.||+|.|++|-.|+. .+..| +.+... .
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT-----Q 89 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT-----Q 89 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc-----c
Confidence 4556688899999999999987753 33333 112222 5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..+|||.|.-.+|+|++||-++. ..+......++..||..|+.|+|
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCH 135 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCH 135 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999998765 45778778889999999999999
No 422
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.19 E-value=2.7e-06 Score=86.99 Aligned_cols=53 Identities=25% Similarity=0.260 Sum_probs=47.2
Q ss_pred eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 ~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.|.|.. ....++|.+|++.|+|.|.+.... ..++|.-...+.++++.||+|+|
T Consensus 13 ~g~~~~-----~~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh 65 (484)
T KOG1023|consen 13 IGASVD-----GPEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLH 65 (484)
T ss_pred eeeEec-----CCceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHh
Confidence 566776 678899999999999999998754 57999999999999999999999
No 423
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.18 E-value=5.7e-08 Score=80.01 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=57.1
Q ss_pred CCEeecccccccccCCcccc---cccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEE
Q 039925 83 LEYLLLANNHFSGKIPANLS---HCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYD 159 (549)
Q Consensus 83 L~~L~Ls~n~l~~~~p~~l~---~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 159 (549)
+..++|+.|.+. .+++... ....| ...+|++|.+....+..-...+.+++|++++|.|+ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el-~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYEL-TKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceE-EEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445556666554 3444332 23333 44566666665333333334455666666666665 556556666666666
Q ss_pred ecccCcceecccccccccc-cceeeCCCCcCcccCch
Q 039925 160 NINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPL 195 (549)
Q Consensus 160 ~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~ 195 (549)
+++.|.+. ..|+.+..+. +-.|+..+|.+. .+|.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 66666655 3445555455 555665555554 4443
No 424
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.17 E-value=3.8e-06 Score=85.81 Aligned_cols=82 Identities=17% Similarity=0.157 Sum_probs=66.3
Q ss_pred cccccCcCCCccccCceecEEEEEeC--CCce------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG--EKWT------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~------------------------------------~g~~~~~~~~~~ 433 (549)
...+.|.....||+|.|+.|..|+.. ++.| +.+... +
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t-----~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET-----E 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee-----c
Confidence 55677888999999999999999864 3333 344555 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..+++||||+.+|.+++++..++ .........+..|+.+|++|||
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~g------r~~e~~ar~~F~q~vsaveYcH 172 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHG------RMKEKEARAKFRQIVSAVEYCH 172 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhcc------cchhhhhhhhhHHHHHHHHHHh
Confidence 78999999999999999999765 3444666678899999999999
No 425
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=2e-07 Score=86.75 Aligned_cols=205 Identities=17% Similarity=0.161 Sum_probs=122.9
Q ss_pred ceeeeccccccccc-cccc-CCCCCCCEEEeecceeee--eCCccccCCCCCCEEecccCcceecccccccccc-cceee
Q 039925 109 TKLFICETHLSGQL-LDFI-GNPSAIQVMIFKENSLEG--KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNF 183 (549)
Q Consensus 109 ~~L~Ls~n~l~~~~-~~~~-~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~ 183 (549)
+.|.+.++.|...- ...| ...+.++.|||.+|.|+. .+...+.+|+.|++|+|+.|.+...+...-..+. |+.|-
T Consensus 48 ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lV 127 (418)
T KOG2982|consen 48 ELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLV 127 (418)
T ss_pred hhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEE
Confidence 44555555543211 1122 235789999999999983 3444567899999999999998854433223444 89999
Q ss_pred CCCCcCcccCchhhhhcCCCCcEeeecccc-c--cc---ccccCcccccEEEcccccccccc-ChhhhhccccCccEEEc
Q 039925 184 LPENSFTGNLPLEIGVTLPKGRNYYILLLA-Q--KL---YWSDVSTTATIIAMGGNQISGTI-TLGIKKLIFVNLYALTM 256 (549)
Q Consensus 184 l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~-~--~l---~~l~~~~~L~~L~l~~n~l~~~~-~~~~~~l~~~~L~~L~L 256 (549)
|.+..+...-..++...+|.++.|+|+.+- . ++ ..-...+.+.+|.+..|....-. -..+... |+++..+-+
T Consensus 128 LNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-Fpnv~sv~v 206 (418)
T KOG2982|consen 128 LNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-FPNVNSVFV 206 (418)
T ss_pred EcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-cccchheee
Confidence 998888765555555688888888887520 0 00 00011122233332222211000 0000111 377777888
Q ss_pred CCCcccccCCCcCccccCCccccCeeeccCccccc-cCCccccCCCCCCEEEccCCcccccC
Q 039925 257 VKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQG-NLPSSLGYYQNLMELSVSRNKLSASL 317 (549)
Q Consensus 257 ~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~ 317 (549)
..|.+...-. -.....++.+..|+|+.|+|.. .--+.+.+++.|..|.+++|.+...+
T Consensus 207 ~e~PlK~~s~---ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 207 CEGPLKTESS---EKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred ecCcccchhh---cccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 8887764332 2345567777788898888862 12356778889999999998887543
No 426
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.16 E-value=6.3e-08 Score=90.01 Aligned_cols=176 Identities=15% Similarity=0.120 Sum_probs=96.4
Q ss_pred ceeeecccccccc-cccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCc-ceecc-cccccccc-cceeeC
Q 039925 109 TKLFICETHLSGQ-LLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNE-FSGLI-PSFIFNIS-LKWNFL 184 (549)
Q Consensus 109 ~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~-p~~~~~l~-L~~L~l 184 (549)
++||||+..|+.. +-..+..+.+|+.|.|.++++...+...+.+..+|+.|+|+.+. ++... .-.+.+++ |..|++
T Consensus 188 q~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNl 267 (419)
T KOG2120|consen 188 QHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNL 267 (419)
T ss_pred HHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCc
Confidence 6677776666532 23344556667777777777766666666666777777776643 22111 11234555 666666
Q ss_pred CCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccc---ccccChhhhhccccCccEEEcCCCcc
Q 039925 185 PENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQI---SGTITLGIKKLIFVNLYALTMVKNKL 261 (549)
Q Consensus 185 ~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l---~~~~~~~~~~l~~~~L~~L~L~~n~l 261 (549)
+.+.++...-..+. .+..++|+.|++++..= ...+..-...+ ++|.+|||++|..
T Consensus 268 sWc~l~~~~Vtv~V--------------------~hise~l~~LNlsG~rrnl~~sh~~tL~~rc--p~l~~LDLSD~v~ 325 (419)
T KOG2120|consen 268 SWCFLFTEKVTVAV--------------------AHISETLTQLNLSGYRRNLQKSHLSTLVRRC--PNLVHLDLSDSVM 325 (419)
T ss_pred hHhhccchhhhHHH--------------------hhhchhhhhhhhhhhHhhhhhhHHHHHHHhC--Cceeeeccccccc
Confidence 66655432211110 12334566666665421 11222223455 7778888877643
Q ss_pred cccCCCcCccccCCccccCeeeccCccccccCCc---cccCCCCCCEEEccCC
Q 039925 262 SGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPS---SLGYYQNLMELSVSRN 311 (549)
Q Consensus 262 ~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L~~L~Ls~N 311 (549)
-.. .....|..++.|++|.++.|... +|. .+...|.|.+||+.+.
T Consensus 326 l~~---~~~~~~~kf~~L~~lSlsRCY~i--~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 326 LKN---DCFQEFFKFNYLQHLSLSRCYDI--IPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred cCc---hHHHHHHhcchheeeehhhhcCC--ChHHeeeeccCcceEEEEeccc
Confidence 211 12345566777888887777543 343 3456777888777554
No 427
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.14 E-value=1.1e-07 Score=86.03 Aligned_cols=86 Identities=14% Similarity=0.184 Sum_probs=63.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
-++.|+.-++||+|.|..||++.... |.. .-+-....+....+.++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 35677788899999999999987543 322 000011112236788999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+|.||+|..-|..+. .++....-.+.+||.+|+.|+|
T Consensus 89 Fe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred EecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987776433 5777888889999999999999
No 428
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.13 E-value=3.4e-06 Score=76.09 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=28.9
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhh
Q 039925 511 SVLTIGILCSVESPSERMEKPYIVSKLSHAREN 543 (549)
Q Consensus 511 ~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~ 543 (549)
++.+++.+||+.+|++||++.|+++.+..+..+
T Consensus 140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 140 SFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 588999999999999999999999988766543
No 429
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.12 E-value=9.5e-06 Score=78.38 Aligned_cols=86 Identities=19% Similarity=0.264 Sum_probs=63.0
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce--------------------------------eE--EEecc--ccCCCceEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------AG--YSEGT--DFKGIDFKA 437 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------~g--~~~~~--~~~~~~~~~ 437 (549)
++.|.....+|+|.||.|.++..+.... .| -|.-. -+.-.+..+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 5667788889999999999998765532 01 01110 001145788
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+|.| +-|++++|+... -.+++-.+...|+.|++++++|||
T Consensus 168 ivfell-G~S~~dFlk~N~----y~~fpi~~ir~m~~QL~~sv~fLh 209 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENN----YIPFPIDHIRHMGYQLLESVAFLH 209 (415)
T ss_pred EEEecc-ChhHHHHhccCC----ccccchHHHHHHHHHHHHHHHHHH
Confidence 999975 459999998754 456888888999999999999999
No 430
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.11 E-value=6.2e-07 Score=82.44 Aligned_cols=224 Identities=19% Similarity=0.192 Sum_probs=106.0
Q ss_pred cCCCCCCEEEccCCcceec----CCccccCCCCCCEeeccccccc---ccCCcccccccCccceeeeccccccccccccc
Q 039925 54 GNFGYLRFINLVDNNFRGE----IPEKVGRLFRLEYLLLANNHFS---GKIPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~---~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
..+..+..++||+|.|... +...+.+-.+|+..+++.-... ..+|+++. .+-.++
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~------------------~Ll~aL 88 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLV------------------MLLKAL 88 (388)
T ss_pred HhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHH------------------HHHHHH
Confidence 3456677788888877643 3344555667777776653221 12222110 011223
Q ss_pred CCCCCCCEEEeecceeeeeCCcc----ccCCCCCCEEecccCcceec----cccc---------ccccc-cceeeCCCCc
Q 039925 127 GNPSAIQVMIFKENSLEGKFPNT----LSNLRSLFYDNINRNEFSGL----IPSF---------IFNIS-LKWNFLPENS 188 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~L~~n~l~~~----~p~~---------~~~l~-L~~L~l~~n~ 188 (549)
-++++|+..+||.|.+....|+. +.+-+.|.+|.|++|.+... +... ..+-+ |+.+....|+
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNR 168 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNR 168 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccch
Confidence 34455555555555554333332 23344555555555543211 1100 11223 5555555555
Q ss_pred CcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccccc-----ChhhhhccccCccEEEcCCCcccc
Q 039925 189 FTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTI-----TLGIKKLIFVNLYALTMVKNKLSG 263 (549)
Q Consensus 189 l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~-----~~~~~~l~~~~L~~L~L~~n~l~~ 263 (549)
+. ..|...... .+.....|+.+.+..|.|.... -..+..+ .+|+.|||.+|-++-
T Consensus 169 le-ngs~~~~a~-----------------~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~--~~LevLDlqDNtft~ 228 (388)
T COG5238 169 LE-NGSKELSAA-----------------LLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYS--HSLEVLDLQDNTFTL 228 (388)
T ss_pred hc-cCcHHHHHH-----------------HHHhhcCceeEEeeecCcCcchhHHHHHHHHHHh--Ccceeeeccccchhh
Confidence 54 222221100 0011124566666666554221 1122333 667777777776653
Q ss_pred cCCCcCccccCCccccCeeeccCccccccCCcc----c--cCCCCCCEEEccCCcccc
Q 039925 264 PIPHHIASSLGNLTLLTYLALDNNKLQGNLPSS----L--GYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 264 ~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~----l--~~l~~L~~L~Ls~N~l~~ 315 (549)
.....+...+...+.|++|.+.+|-++..-..+ | ...|+|..|...+|...+
T Consensus 229 ~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 229 EGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred hhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 222222333444566777777777776332221 2 235677777777777654
No 431
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.03 E-value=7.4e-06 Score=77.29 Aligned_cols=87 Identities=20% Similarity=0.211 Sum_probs=65.6
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce--------------------------eEEEecc-------ccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------AGYSEGT-------DFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------~g~~~~~-------~~~~~~~~~ 437 (549)
...++|+..++||+|.||.|..++-+ .++. +..|... .+...+..+
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 46789999999999999999988754 2322 0001100 012267899
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.||||+.||.|+-+|...+ .++..+..-+-..|..||.|||
T Consensus 245 FVMeyanGGeLf~HLsrer------~FsE~RtRFYGaEIvsAL~YLH 285 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRER------VFSEDRTRFYGAEIVSALGYLH 285 (516)
T ss_pred EEEEEccCceEeeehhhhh------cccchhhhhhhHHHHHHhhhhh
Confidence 9999999999999998654 6777776678899999999999
No 432
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.02 E-value=3.9e-06 Score=56.03 Aligned_cols=37 Identities=32% Similarity=0.468 Sum_probs=22.8
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEeeccccccc
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFS 94 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 94 (549)
++|++|++++|+|+ .+|..|++|++|++|++++|+|+
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 35666666666666 45555666666666666666666
No 433
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.02 E-value=2.5e-06 Score=82.82 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=64.4
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~~ 433 (549)
..+|....+||+|+||.|..|..++... ...+.. -
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT-----m 422 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT-----M 422 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh-----h
Confidence 3478888899999999999998765443 111222 4
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..+.||||+.+|+|--.++..+ .+.....+-+|..||-||-|||
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~G------kFKEp~AvFYAaEiaigLFFLh 467 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVG------KFKEPVAVFYAAEIAIGLFFLH 467 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhc------ccCCchhhhhhHHHHHHhhhhh
Confidence 67899999999999998888654 6788888899999999999999
No 434
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.98 E-value=1.3e-05 Score=77.09 Aligned_cols=87 Identities=18% Similarity=0.323 Sum_probs=59.5
Q ss_pred ccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccc-cCCCc
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTD-FKGID 434 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~-~~~~~ 434 (549)
..|...+.||+|.||+||+|+.. +|.. .+++.... +....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34566667999999999999853 3322 22233210 11223
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++|+||+.. +|.+++...... ...++......+..|+.+|++|||
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~--~~g~~~~~ik~~m~Qll~gl~~~H 137 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKK--PQGLPPRLIKSFMRQLLRGLAFLH 137 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhcccc--ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999875 888888765411 034555778889999999999999
No 435
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.95 E-value=1.8e-05 Score=79.04 Aligned_cols=57 Identities=16% Similarity=0.279 Sum_probs=31.1
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccc
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICET 116 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n 116 (549)
+..+.+++.|++++|.++ .+|. + -.+|+.|.+++|.--..+|+.+. .+| ++|++++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~LP--~nL-e~L~Ls~C 104 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSIP--EGL-EKLTVCHC 104 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchhh--hhh-hheEccCc
Confidence 445577777888777776 5552 1 23577777766432224454331 344 55555554
No 436
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.88 E-value=2.1e-05 Score=81.05 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=62.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++.|.....+|.|+|++|-++....... .+++.+ ....++
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~-----~~~~~~ 393 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYED-----GKEIYL 393 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecC-----Cceeee
Confidence 356777777789999999999987643221 344544 678899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||++.+|-+.+-+.... .+. ..+..|+.+++.|+.|||
T Consensus 394 v~e~l~g~ell~ri~~~~------~~~-~e~~~w~~~lv~Av~~LH 432 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP------EFC-SEASQWAAELVSAVDYLH 432 (612)
T ss_pred eehhccccHHHHHHHhcc------hhH-HHHHHHHHHHHHHHHHHH
Confidence 999999998888877554 233 566779999999999999
No 437
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.85 E-value=1.3e-05 Score=53.51 Aligned_cols=36 Identities=36% Similarity=0.528 Sum_probs=19.4
Q ss_pred CCCEeecccccccccCCcccccccCccceeeecccccc
Q 039925 82 RLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLS 119 (549)
Q Consensus 82 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~ 119 (549)
+|++|++++|+|+ .+|..+.++++| +.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L-~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNL-ETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTS-SEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCC-CEEEecCCCCC
Confidence 4566666666665 455555555555 55555555554
No 438
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=97.84 E-value=8.1e-06 Score=80.04 Aligned_cols=46 Identities=22% Similarity=0.329 Sum_probs=41.4
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..+-|.|||+|.+|+-||+.++ .++.+....|+.||+.||.||.
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk------lmSEKEARSIiMQiVnAL~YLN 585 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK------LMSEKEARSIIMQIVNALKYLN 585 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh------hhhHHHHHHHHHHHHHHHHHHh
Confidence 567789999999999999999765 6788888999999999999997
No 439
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=97.82 E-value=0.00016 Score=77.36 Aligned_cols=70 Identities=19% Similarity=0.238 Sum_probs=53.4
Q ss_pred cCcCCCccccCceecEEEEEeCCCce------------------------------------------eEEEeccccCCC
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------------~g~~~~~~~~~~ 433 (549)
.|...+.||+|+||.||+|.+.+..+ ..++.. .
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~ 408 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD-----P 408 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe-----C
Confidence 34567889999999999988765433 111222 3
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++++|.+++. .+..++.++++++.|||
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH 445 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLH 445 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHH
Confidence 45689999999999988764 24678999999999999
No 440
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.82 E-value=2.1e-05 Score=72.63 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=65.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------eEEEecc----------ccCCCceEEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------AGYSEGT----------DFKGIDFKAVV 439 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------~g~~~~~----------~~~~~~~~~lv 439 (549)
.-.+.|+..+.+|+|.||.+-.++.++... +++..+. .+...+....+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 345678899999999999999999876553 2222111 01224678899
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||+|.|+|.+-+...+ +......+++.|++.|++|+|
T Consensus 101 qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMH 138 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMH 138 (378)
T ss_pred eccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhh
Confidence 99999999999887543 666777889999999999999
No 441
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=97.79 E-value=2.3e-05 Score=75.32 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=62.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cc-e------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KW-T------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-~------------------------------------~g~~~~~~~~~~ 433 (549)
.....|...+.||+|+||.|..++... +. | ...........-
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 555666667889999999999998643 32 2 111111111123
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...|+|+|+| .-+|...++... .++-.+..-+..|+.+|+.|+|
T Consensus 99 ~DvYiV~elM-etDL~~iik~~~------~L~d~H~q~f~YQiLrgLKyiH 142 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQQ------DLTDDHAQYFLYQILRGLKYIH 142 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcCc------cccHHHHHHHHHHHHHhcchhh
Confidence 5689999999 459999998654 5888888889999999999999
No 442
>PRK14879 serine/threonine protein kinase; Provisional
Probab=97.78 E-value=4.9e-05 Score=70.80 Aligned_cols=69 Identities=19% Similarity=0.289 Sum_probs=53.8
Q ss_pred CccccCceecEEEEEeCCCce------------------------------------------eEEEeccccCCCceEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKWT------------------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~~------------------------------------------~g~~~~~~~~~~~~~~l 438 (549)
+.||+|++|.||+|.+.+..+ ..++.. ....++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~~~l 76 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-----PENFII 76 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-----CCCCEE
Confidence 469999999999998755443 122222 445689
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++++|.+++.... + .+..++.+++.+|.++|
T Consensus 77 v~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH 112 (211)
T PRK14879 77 VMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLH 112 (211)
T ss_pred EEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHH
Confidence 999999999999986432 2 77889999999999999
No 443
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.78 E-value=5e-05 Score=80.40 Aligned_cols=83 Identities=25% Similarity=0.324 Sum_probs=60.2
Q ss_pred cCcCCCccccCcee-cEEEEEeCCCce------------------------------eEEEeccccCCCceEEEEEeecC
Q 039925 396 EFSSSNMIGQGSFG-SVYKGILGEKWT------------------------------AGYSEGTDFKGIDFKAVVFDYMQ 444 (549)
Q Consensus 396 ~~~~~~~lG~G~~g-~Vy~~~~~~~~~------------------------------~g~~~~~~~~~~~~~~lv~ey~~ 444 (549)
-|...+++|+|+-| .||+|.+.+..| .-||.+.+ +.+.|+..|.|.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d---~qF~YIalELC~ 586 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQD---RQFLYIALELCA 586 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccC---CceEEEEehHhh
Confidence 35677889999987 579999988777 45677644 789999999986
Q ss_pred CCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 445 NRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 445 ~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
- +|.+++..... ......--....+..|++.|++|||
T Consensus 587 ~-sL~dlie~~~~--d~~~~~~i~~~~~l~q~~~GlaHLH 623 (903)
T KOG1027|consen 587 C-SLQDLIESSGL--DVEMQSDIDPISVLSQIASGLAHLH 623 (903)
T ss_pred h-hHHHHHhcccc--chhhcccccHHHHHHHHHHHHHHHH
Confidence 5 99999986310 0011110223567889999999999
No 444
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.75 E-value=1.7e-05 Score=74.82 Aligned_cols=74 Identities=20% Similarity=0.274 Sum_probs=60.0
Q ss_pred CCccccCceecEEEEEe-CCCce------------------------------------eEEEeccccCCCceEEEEEee
Q 039925 400 SNMIGQGSFGSVYKGIL-GEKWT------------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~-~~~~~------------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
+++||+|+|+.|.-++- ..+.. +.++.+ +...|||||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd-----d~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED-----DTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc-----cceEEEEEec
Confidence 45799999999998873 33322 122333 6778999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|.||+|...|+.++ .++....-++..+||.||.|||
T Consensus 158 m~GGplLshI~~~~------~F~E~EAs~vvkdia~aLdFlH 193 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRK------HFNEREASRVVKDIASALDFLH 193 (463)
T ss_pred ccCchHHHHHHHhh------hccHHHHHHHHHHHHHHHHHHh
Confidence 99999999999765 6888888899999999999999
No 445
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.75 E-value=4.6e-06 Score=76.87 Aligned_cols=156 Identities=18% Similarity=0.096 Sum_probs=97.2
Q ss_pred ccccCCCCCCEEecccCcceecccccc----cccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCc
Q 039925 148 NTLSNLRSLFYDNINRNEFSGLIPSFI----FNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVS 222 (549)
Q Consensus 148 ~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~ 222 (549)
..+-+++.|+..+|++|.+....|..+ ...+ |.+|.|++|.+.-....-++..+..|-+ .....-.
T Consensus 86 ~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~---------nKKaa~k 156 (388)
T COG5238 86 KALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAY---------NKKAADK 156 (388)
T ss_pred HHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHH---------HhhhccC
Confidence 456788999999999999987666543 4445 9999999998763222233311111100 0111223
Q ss_pred ccccEEEccccccccccC----hhhhhccccCccEEEcCCCcccccCCC-cCccccCCccccCeeeccCcccccc----C
Q 039925 223 TTATIIAMGGNQISGTIT----LGIKKLIFVNLYALTMVKNKLSGPIPH-HIASSLGNLTLLTYLALDNNKLQGN----L 293 (549)
Q Consensus 223 ~~L~~L~l~~n~l~~~~~----~~~~~l~~~~L~~L~L~~n~l~~~~p~-~l~~~l~~l~~L~~L~Ls~N~l~~~----~ 293 (549)
|.|+++....|++..... ..+..- .+|+.+.+..|.|.-..-. -+-..+..+.+|+.|||.+|-++-. +
T Consensus 157 p~Le~vicgrNRlengs~~~~a~~l~sh--~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 157 PKLEVVICGRNRLENGSKELSAALLESH--ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred CCceEEEeccchhccCcHHHHHHHHHhh--cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 578889999998874222 122333 5788999999988611000 0011234567889999999988732 3
Q ss_pred CccccCCCCCCEEEccCCccc
Q 039925 294 PSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
...++..+.|+.|.+..|-++
T Consensus 235 a~al~~W~~lrEL~lnDClls 255 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLS 255 (388)
T ss_pred HHHhcccchhhhccccchhhc
Confidence 345566677888888877766
No 446
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.71 E-value=8.9e-05 Score=74.23 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=87.0
Q ss_pred ccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecc-eeeeeCCccccCCCC
Q 039925 77 VGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKEN-SLEGKFPNTLSNLRS 155 (549)
Q Consensus 77 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~ 155 (549)
+..+.+++.|++++|.++ .+|. + -.+| +.|.+++|.-...+|+.+ .++|+.|++++| .+. .+|. +
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sL-tsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------s 113 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNEL-TEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------S 113 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCC-cEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------c
Confidence 455788999999999888 6773 2 2346 999999865545667655 368999999998 554 5654 5
Q ss_pred CCEEecccCcceecccccccccc--cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccc
Q 039925 156 LFYDNINRNEFSGLIPSFIFNIS--LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGN 233 (549)
Q Consensus 156 L~~L~L~~n~l~~~~p~~~~~l~--L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n 233 (549)
|+.|++..+... .+..++ |+.|.+.+++.. .+..+.. .++++|++|++++|
T Consensus 114 Le~L~L~~n~~~-----~L~~LPssLk~L~I~~~n~~--~~~~lp~--------------------~LPsSLk~L~Is~c 166 (426)
T PRK15386 114 VRSLEIKGSATD-----SIKNVPNGLTSLSINSYNPE--NQARIDN--------------------LISPSLKTLSLTGC 166 (426)
T ss_pred cceEEeCCCCCc-----ccccCcchHhheeccccccc--ccccccc--------------------ccCCcccEEEecCC
Confidence 777888766543 133343 667776443211 0000000 12347888888877
Q ss_pred ccccccChhhhhccccCccEEEcCCCc
Q 039925 234 QISGTITLGIKKLIFVNLYALTMVKNK 260 (549)
Q Consensus 234 ~l~~~~~~~~~~l~~~~L~~L~L~~n~ 260 (549)
... ..|..+. .+|+.|+++.+.
T Consensus 167 ~~i-~LP~~LP----~SLk~L~ls~n~ 188 (426)
T PRK15386 167 SNI-ILPEKLP----ESLQSITLHIEQ 188 (426)
T ss_pred Ccc-cCccccc----ccCcEEEecccc
Confidence 754 2333332 578888887763
No 447
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.66 E-value=0.00011 Score=67.02 Aligned_cols=42 Identities=12% Similarity=0.224 Sum_probs=34.1
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHh-h
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYL-R 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yL-H 484 (549)
++||||++++++....... ..+++.....++.|++.+|+|+ |
T Consensus 93 ~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H 135 (190)
T cd05147 93 VLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQ 135 (190)
T ss_pred EEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999998776553222 3578888899999999999999 6
No 448
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.65 E-value=8.2e-05 Score=74.59 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=52.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCC--CceeEEEe---c-----cc------------------------cCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE--KWTAGYSE---G-----TD------------------------FKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~~g~~~---~-----~~------------------------~~~~~~~~l 438 (549)
..+.|...+.||+|+||+||+|.... +.+...-. . .+ +......++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~L 95 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGL 95 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEE
Confidence 45679999999999999999998642 33211100 0 00 001234689
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++++|... ... . ...++.++++|++|||
T Consensus 96 VmE~~~G~~L~~~-~~~------~------~~~~~~~i~~aL~~lH 128 (365)
T PRK09188 96 VRGWTEGVPLHLA-RPH------G------DPAWFRSAHRALRDLH 128 (365)
T ss_pred EEEccCCCCHHHh-Ccc------c------hHHHHHHHHHHHHHHH
Confidence 9999999999732 111 1 1357889999999999
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.65 E-value=7.8e-05 Score=68.72 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=31.5
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++++|.+++.... . .++.+++++|.++|
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH 107 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLH 107 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHH
Confidence 34589999999999999876432 1 78999999999999
No 450
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.64 E-value=0.00011 Score=68.72 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=61.8
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
|...+.||.|++|.||+|...+ +.. .+++.. ....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-----~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-----PEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-----CCceEEE
Confidence 4556789999999999999865 221 223332 4678899
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||+++++|.+++.... ..+++.....++.++++++.|||
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh 115 (225)
T smart00221 76 MEYCEGGDLFDYLRKKG-----GKLSEEEARFYLRQILEALEYLH 115 (225)
T ss_pred EeccCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998643 11789999999999999999999
No 451
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.63 E-value=2.8e-05 Score=73.61 Aligned_cols=85 Identities=18% Similarity=0.201 Sum_probs=65.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
....+|+..++||+|+|+.|..+++..... .|. ..++..+.
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvgl--hscfqtes 324 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGL--HSCFQTES 324 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEeh--hhhhcccc
Confidence 356789999999999999999998754332 121 11122367
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..+.|.||+++|+|--.++.+. .++.....-+...|+.||.|||
T Consensus 325 rlffvieyv~ggdlmfhmqrqr------klpeeharfys~ei~lal~flh 368 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEICLALNFLH 368 (593)
T ss_pred eEEEEEEEecCcceeeehhhhh------cCcHHHhhhhhHHHHHHHHHHh
Confidence 8899999999999988887654 5777777778899999999999
No 452
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.59 E-value=0.0001 Score=65.29 Aligned_cols=17 Identities=47% Similarity=0.565 Sum_probs=7.5
Q ss_pred cCCCCCCEeeccccccc
Q 039925 78 GRLFRLEYLLLANNHFS 94 (549)
Q Consensus 78 ~~l~~L~~L~Ls~n~l~ 94 (549)
..+++|.+|.|++|+|+
T Consensus 61 p~l~rL~tLll~nNrIt 77 (233)
T KOG1644|consen 61 PHLPRLHTLLLNNNRIT 77 (233)
T ss_pred CCccccceEEecCCcce
Confidence 33444444444444444
No 453
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.55 E-value=3e-05 Score=70.78 Aligned_cols=83 Identities=18% Similarity=0.294 Sum_probs=59.3
Q ss_pred cCcCCCccccCceecEEEEEeCCCce-------------eE-------------------------EEecc---ccCCCc
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT-------------AG-------------------------YSEGT---DFKGID 434 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------~g-------------------------~~~~~---~~~~~~ 434 (549)
.|..-..||+|.||.|++|+...+.. .| .|... ..+-+.
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34455679999999999998754332 01 12111 011134
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++|+++|+. +|.-.|.... .+++.....++..+...||.|+|
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iH 141 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIH 141 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHH
Confidence 58999999987 7888887653 56888888999999999999999
No 454
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.52 E-value=0.00014 Score=64.42 Aligned_cols=123 Identities=18% Similarity=0.257 Sum_probs=88.9
Q ss_pred CEEEccCCcceecCCcccc-CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 60 RFINLVDNNFRGEIPEKVG-RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
+.++|.+.++. .+-. ++ -+.+...+||++|.+. .+ +.|..++.| .+|.+.+|+|+.+-|.--..+++|+.|.|.
T Consensus 22 ~e~~LR~lkip-~ien-lg~~~d~~d~iDLtdNdl~-~l-~~lp~l~rL-~tLll~nNrIt~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 22 RELDLRGLKIP-VIEN-LGATLDQFDAIDLTDNDLR-KL-DNLPHLPRL-HTLLLNNNRITRIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccc-chhh-ccccccccceecccccchh-hc-ccCCCcccc-ceEEecCCcceeeccchhhhccccceEEec
Confidence 45666666554 2211 22 2356788999999987 33 347788999 999999999998777766667899999999
Q ss_pred cceeeeeCC--ccccCCCCCCEEecccCcceecc---cccccccc-cceeeCCCCc
Q 039925 139 ENSLEGKFP--NTLSNLRSLFYDNINRNEFSGLI---PSFIFNIS-LKWNFLPENS 188 (549)
Q Consensus 139 ~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~---p~~~~~l~-L~~L~l~~n~ 188 (549)
+|+|. .+. +-+..+++|++|.+-+|.++..- --.+..++ |+.||+++-.
T Consensus 97 nNsi~-~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 97 NNSIQ-ELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred Ccchh-hhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 99997 322 23677899999999999876321 12456677 9999987643
No 455
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=97.51 E-value=2.7e-05 Score=73.31 Aligned_cols=90 Identities=20% Similarity=0.251 Sum_probs=62.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce-----------------eEEEeccc---------------------cCCCce
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------AGYSEGTD---------------------FKGIDF 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------~g~~~~~~---------------------~~~~~~ 435 (549)
...|.....||+|.||.||||+-.++.- -|+..++. ......
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 3457777789999999999996532211 12211110 122467
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhhc
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLRV 485 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH~ 485 (549)
.++++||++. +|...|+.+.... ...++..+..+|.-||..|+.|||.
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~-~~~lp~~mvKsilwQil~Gv~YLH~ 150 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASK-AKQLPRSMVKSILWQILDGVHYLHS 150 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccch-hccCCHHHHHHHHHHHHhhhHHHhh
Confidence 8999999887 8888888665222 2467778888999999999999993
No 456
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.45 E-value=0.0004 Score=63.49 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=32.3
Q ss_pred EEEEeecCCCCcccc-cccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDW-PYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~-l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++++++... +.. ..++......++.++++++.|+|
T Consensus 93 ~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH 134 (190)
T cd05145 93 VLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLY 134 (190)
T ss_pred EEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999865433 332 24667778899999999999999
No 457
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.39 E-value=1.2e-05 Score=74.10 Aligned_cols=128 Identities=16% Similarity=0.213 Sum_probs=80.6
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce----------------eEE-------Ee--c------ccc------CCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT----------------AGY-------SE--G------TDF------KGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----------------~g~-------~~--~------~~~------~~~ 433 (549)
...-|....+-||.|+||+||-.+.+ +|+. .++ |. . .+. .--
T Consensus 50 qqq~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfF 129 (449)
T KOG0664|consen 50 QQQQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFF 129 (449)
T ss_pred cccccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHH
Confidence 33446778889999999999988863 4443 000 00 0 000 001
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhhccccCCcceeeeccCcccc----hHHHHH
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLRVKMALPEKVMEIVESSLLL----EIEDCL 509 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH~~~~~~~~~~~~~~~~~~~----~~~~~~ 509 (549)
.+.|+|+|.|. .+|.+.|... ..++-....-+..||.+||.||| ...++.+++.+ ...+|+
T Consensus 130 qEiYV~TELmQ-SDLHKIIVSP------Q~Ls~DHvKVFlYQILRGLKYLH--------sA~ILHRDIKPGNLLVNSNCv 194 (449)
T KOG0664|consen 130 QELYVLTELMQ-SDLHKIIVSP------QALTPDHVKVFVYQILRGLKYLH--------TANILHRDIKPGNLLVNSNCI 194 (449)
T ss_pred HHHHHHHHHHH-hhhhheeccC------CCCCcchhhhhHHHHHhhhHHHh--------hcchhhccCCCccEEeccCce
Confidence 23578888875 4888888753 46777777778899999999999 33344444432 236788
Q ss_pred HHHHHHHHHhccCCCCCCCCH-HHHHH
Q 039925 510 VSVLTIGILCSVESPSERMEK-PYIVS 535 (549)
Q Consensus 510 ~~l~~l~~~C~~~~P~~RP~~-~~v~~ 535 (549)
.++.|+++.-. ++|++|-.| .||+.
T Consensus 195 LKICDFGLARv-ee~d~~~hMTqEVVT 220 (449)
T KOG0664|consen 195 LKICDFGLART-WDQRDRLNMTHEVVT 220 (449)
T ss_pred EEecccccccc-cchhhhhhhHHHHHH
Confidence 88888887665 345555544 45543
No 458
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.31 E-value=0.00017 Score=78.37 Aligned_cols=130 Identities=21% Similarity=0.186 Sum_probs=84.1
Q ss_pred cceeeCCCCcC-cccCchhhhhcCCCCcEeeecc-cccccc---cccCcccccEEEccccccccccChhhhhccccCccE
Q 039925 179 LKWNFLPENSF-TGNLPLEIGVTLPKGRNYYILL-LAQKLY---WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYA 253 (549)
Q Consensus 179 L~~L~l~~n~l-~~~~p~~~~~~l~~L~~L~l~~-~~~~l~---~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~ 253 (549)
|++|++++... ....|..++..+|+|+.|.+.+ .+..-. .....++|..||+|+.+++.. ..++.+ ++|+.
T Consensus 124 L~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~L--knLq~ 199 (699)
T KOG3665|consen 124 LQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRL--KNLQV 199 (699)
T ss_pred hhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhcc--ccHHH
Confidence 66666666543 2234556666777888777777 222211 123346888889998888754 677888 88888
Q ss_pred EEcCCCcccccCCCcCccccCCccccCeeeccCccccccC------CccccCCCCCCEEEccCCcccc
Q 039925 254 LTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNL------PSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 254 L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
|.+.+=.+.... . -..+.+|++|+.||+|........ -+.-..+|+|+.||.|++.++.
T Consensus 200 L~mrnLe~e~~~--~-l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 200 LSMRNLEFESYQ--D-LIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred HhccCCCCCchh--h-HHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 888876665211 0 134667889999999877655211 1223458899999999887764
No 459
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.29 E-value=0.0003 Score=70.88 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=55.6
Q ss_pred CCCccccCceecEEEEEeCC-Cc-e------------------------------eE-EEeccccCCCceEEEEEeecCC
Q 039925 399 SSNMIGQGSFGSVYKGILGE-KW-T------------------------------AG-YSEGTDFKGIDFKAVVFDYMQN 445 (549)
Q Consensus 399 ~~~~lG~G~~g~Vy~~~~~~-~~-~------------------------------~g-~~~~~~~~~~~~~~lv~ey~~~ 445 (549)
.+++||.|-||.||-|..+. |+ | -| ++.+--+..++..++|||-+.+
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 35689999999999998753 22 2 01 1111111227889999999865
Q ss_pred CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 446 RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 446 GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
-=|+-.|..++ ++++.+...-+..||..||.|||
T Consensus 648 DMLEMILSsEk-----gRL~er~TkFlvtQIL~ALr~LH 681 (888)
T KOG4236|consen 648 DMLEMILSSEK-----GRLPERITKFLVTQILVALRYLH 681 (888)
T ss_pred hHHHHHHHhhc-----ccchHHHHHHHHHHHHHHHHHhh
Confidence 55555555544 56777776678899999999999
No 460
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.26 E-value=0.0013 Score=55.71 Aligned_cols=106 Identities=16% Similarity=0.123 Sum_probs=57.3
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
+|.++++|+.+.+.. .+...-...|..+++|+.+.+..+ +...-...|..++.+ +.+.+.. .+.......|..+++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l-~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSL-ESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT--EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeeccccc-ccccccc-ccccccccccccccc
Confidence 677778888888874 466444557788878888888775 553333456667677 7888765 444344556777777
Q ss_pred CCEEEeecceeeeeCCccccCCCCCCEEeccc
Q 039925 132 IQVMIFKENSLEGKFPNTLSNLRSLFYDNINR 163 (549)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 163 (549)
|+.+++..+ +...-...|.+. +|+.+.+..
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-TT
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEECC
Confidence 887777655 443445556665 777776654
No 461
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.24 E-value=0.00011 Score=63.58 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=56.9
Q ss_pred cCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+|+..+.||+|.||+|+||+-+ .+.+ +.+-.+ ....-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-----dkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-----CceeE
Confidence 4666778999999999999843 3333 111112 45677
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+|||.. +|.++...-. +.++.....+++.|..+|+.|+|
T Consensus 78 lvfe~cdq-dlkkyfdsln-----g~~d~~~~rsfmlqllrgl~fch 118 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSLN-----GDLDPEIVRSFMLQLLRGLGFCH 118 (292)
T ss_pred EeHHHhhH-HHHHHHHhcC-----CcCCHHHHHHHHHHHHhhhhhhh
Confidence 99999865 6666655433 56788888899999999999999
No 462
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.24 E-value=0.0004 Score=71.59 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=61.8
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~ 434 (549)
...|...+.||-|+||.|-.+..-|... +..+.+ .+
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD-----kd 702 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD-----KD 702 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc-----CC
Confidence 3457788889999999999987644322 222334 78
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+|+||||++||++-.+|-..+ .|......-++..++.|++|.|
T Consensus 703 nLYFVMdYIPGGDmMSLLIrmg------IFeE~LARFYIAEltcAiesVH 746 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIRMG------IFEEDLARFYIAELTCAIESVH 746 (1034)
T ss_pred ceEEEEeccCCccHHHHHHHhc------cCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999987654 5777666667788999999999
No 463
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.23 E-value=0.00024 Score=78.52 Aligned_cols=85 Identities=19% Similarity=0.164 Sum_probs=65.6
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce-------------eEEEecc-----------------ccCCCceEEEEEeec
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT-------------AGYSEGT-----------------DFKGIDFKAVVFDYM 443 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------~g~~~~~-----------------~~~~~~~~~lv~ey~ 443 (549)
.+.|...+.+|+|+||.||+|.-.++.. +..|... .+-..+..++|+||.
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~ 776 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS 776 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence 4457788899999999999999877665 1111100 011134568999999
Q ss_pred CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+.|+|.+++... +..+|.-.+.++.++++=+++||
T Consensus 777 ~~Gtlld~~N~~------~~m~e~lv~~~~~qml~ive~lH 811 (974)
T KOG1166|consen 777 PYGTLLDLINTN------KVMDEYLVMFFSCQMLRIVEHLH 811 (974)
T ss_pred ccccHHHhhccC------CCCCchhhhHHHHHHHHHHHHHH
Confidence 999999999843 47899999999999999999999
No 464
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.16 E-value=0.00015 Score=67.10 Aligned_cols=65 Identities=18% Similarity=0.313 Sum_probs=35.7
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccc--cccccCCcccccccCccceeeecccccc
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANN--HFSGKIPANLSHCSNLLTKLFICETHLS 119 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n--~l~~~~p~~l~~l~~L~~~L~Ls~n~l~ 119 (549)
....+..|+.|++.+..++. + ..|-.|++|+.|.+|.| ++.+.++.....+++| ++|++++|+|.
T Consensus 38 l~d~~~~le~ls~~n~gltt-~-~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l-~~l~ls~Nki~ 104 (260)
T KOG2739|consen 38 LTDEFVELELLSVINVGLTT-L-TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNL-KVLNLSGNKIK 104 (260)
T ss_pred ccccccchhhhhhhccceee-c-ccCCCcchhhhhcccCCcccccccceehhhhCCce-eEEeecCCccc
Confidence 33444555666666655552 2 13445666777777777 4444444444445566 66666666554
No 465
>smart00090 RIO RIO-like kinase.
Probab=97.12 E-value=0.001 Score=63.00 Aligned_cols=43 Identities=9% Similarity=0.115 Sum_probs=33.7
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||++++++..+..... .+...+...++.++++++.|||
T Consensus 123 ~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH 165 (237)
T smart00090 123 NVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLY 165 (237)
T ss_pred ceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHH
Confidence 479999999999887653222 3455556789999999999999
No 466
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.04 E-value=0.00023 Score=77.37 Aligned_cols=152 Identities=15% Similarity=0.145 Sum_probs=81.8
Q ss_pred CCCCEEEeecceeee-eCCcccc-CCCCCCEEecccCccee-cccccccccc-cceeeCCCCcCcccCchhhhhcCCCCc
Q 039925 130 SAIQVMIFKENSLEG-KFPNTLS-NLRSLFYDNINRNEFSG-LIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGR 205 (549)
Q Consensus 130 ~~L~~L~L~~n~l~~-~~p~~~~-~l~~L~~L~L~~n~l~~-~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~ 205 (549)
.+|++|++++...-. .-|..++ -+|+|++|.+.+-.+.. .......+++ |..||+|+.+++ .+ ..+. .+++|+
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~-nl-~GIS-~LknLq 198 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNIS-NL-SGIS-RLKNLQ 198 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCcc-Cc-HHHh-ccccHH
Confidence 678888887754431 1222233 36788888887755532 2223344566 777777777776 22 3343 566666
Q ss_pred EeeecccccccccccCcccccEEEcccccccc-ccChhhhhccccCccEEEcCCCcccccC--CCcCccccCCccccCee
Q 039925 206 NYYILLLAQKLYWSDVSTTATIIAMGGNQISG-TITLGIKKLIFVNLYALTMVKNKLSGPI--PHHIASSLGNLTLLTYL 282 (549)
Q Consensus 206 ~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~~~L~~L~L~~n~l~~~~--p~~l~~~l~~l~~L~~L 282 (549)
.|.+.+ =.+.. ..-..+..+ ++|+.||+|..+..... ....-+.-..+|.|+.|
T Consensus 199 ~L~mrn---------------------Le~e~~~~l~~LF~L--~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfL 255 (699)
T KOG3665|consen 199 VLSMRN---------------------LEFESYQDLIDLFNL--KKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFL 255 (699)
T ss_pred HHhccC---------------------CCCCchhhHHHHhcc--cCCCeeeccccccccchHHHHHHHHhcccCccccEE
Confidence 554442 22221 111245556 77777777766544211 00111233457888888
Q ss_pred eccCccccccCCccc-cCCCCCCEEE
Q 039925 283 ALDNNKLQGNLPSSL-GYYQNLMELS 307 (549)
Q Consensus 283 ~Ls~N~l~~~~p~~l-~~l~~L~~L~ 307 (549)
|.|++.+...+-+.+ ..-++|+.+.
T Consensus 256 DcSgTdi~~~~le~ll~sH~~L~~i~ 281 (699)
T KOG3665|consen 256 DCSGTDINEEILEELLNSHPNLQQIA 281 (699)
T ss_pred ecCCcchhHHHHHHHHHhCccHhhhh
Confidence 888888775443322 2334444443
No 467
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.02 E-value=0.0023 Score=54.17 Aligned_cols=123 Identities=19% Similarity=0.142 Sum_probs=67.3
Q ss_pred ccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCC
Q 039925 75 EKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLR 154 (549)
Q Consensus 75 ~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 154 (549)
..|.++++|+.+.+.. .+...-...|..++++ +.+.+..+ +.......|.++++|+.+.+.. .+...-...|..++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l-~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~ 81 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSL-KSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCT 81 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT--SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-T
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccc-cccccccc-ccccceeeeecccccccccccc-cccccccccccccc
Confidence 4688888999999885 5664445567888888 99999875 6655666788888899999976 44435556777899
Q ss_pred CCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCC
Q 039925 155 SLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKG 204 (549)
Q Consensus 155 ~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L 204 (549)
+|+.+.+..+ +.......|.+..|+.+.+.. .+. .++...+.+.++|
T Consensus 82 ~l~~i~~~~~-~~~i~~~~f~~~~l~~i~~~~-~~~-~i~~~~F~~~~~l 128 (129)
T PF13306_consen 82 NLKNIDIPSN-ITEIGSSSFSNCNLKEINIPS-NIT-KIEENAFKNCTKL 128 (129)
T ss_dssp TECEEEETTT--BEEHTTTTTT-T--EEE-TT-B-S-S----GGG-----
T ss_pred cccccccCcc-ccEEchhhhcCCCceEEEECC-Ccc-EECCccccccccC
Confidence 9999998765 554455566665588887765 333 3454444344443
No 468
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.99 E-value=0.0004 Score=78.23 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=37.9
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..+.++||+ .++|+++|.... ..+++.+.+.++.||++||+|||
T Consensus 53 ~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH 97 (793)
T PLN00181 53 DSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAH 97 (793)
T ss_pred chhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHH
Confidence 4567788987 569999997532 46899999999999999999999
No 469
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=96.96 E-value=0.0012 Score=67.42 Aligned_cols=80 Identities=16% Similarity=0.186 Sum_probs=64.3
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce-----------------------------------------------eEEEe
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------------AGYSE 426 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------------~g~~~ 426 (549)
-.+|+....+|.|+||.|+.|.++.... +.++.
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3467888899999999999999865432 23444
Q ss_pred ccccCCCceEEEEEeec-CCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 427 GTDFKGIDFKAVVFDYM-QNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 427 ~~~~~~~~~~~lv~ey~-~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+ .++.+|+||-- ++-+|.++|..+. .++.....-|..||+.|.++||
T Consensus 640 d-----dd~yyl~te~hg~gIDLFd~IE~kp------~m~E~eAk~IFkQV~agi~hlh 687 (772)
T KOG1152|consen 640 D-----DDYYYLETEVHGEGIDLFDFIEFKP------RMDEPEAKLIFKQVVAGIKHLH 687 (772)
T ss_pred c-----CCeeEEEecCCCCCcchhhhhhccC------ccchHHHHHHHHHHHhcccccc
Confidence 4 78899999864 4568999998664 6888888889999999999999
No 470
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=96.82 E-value=0.00022 Score=66.15 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=50.6
Q ss_pred cCcCCCccccCceecEEEEEeCCCc-e-------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+......||.|..|.|++++.+... + +|++.. .....
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-----n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-----NTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-----CchHH
Confidence 4444556899999999999986532 2 344443 33444
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+-||.|.. -++++++.-+ ++++..-.-++...+..||.||-
T Consensus 168 IcMelMs~-C~ekLlkrik-----~piPE~ilGk~tva~v~AL~YLK 208 (391)
T KOG0983|consen 168 ICMELMST-CAEKLLKRIK-----GPIPERILGKMTVAIVKALYYLK 208 (391)
T ss_pred HHHHHHHH-HHHHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHH
Confidence 55665542 2233333322 45777777889999999999995
No 471
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.78 E-value=0.00066 Score=62.88 Aligned_cols=91 Identities=19% Similarity=0.276 Sum_probs=59.7
Q ss_pred CCccccCCCCCCEeecccccccccCCcccccccCccceeeeccc--ccccccccccCCCCCCCEEEeecceeeeeCCcc-
Q 039925 73 IPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICET--HLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNT- 149 (549)
Q Consensus 73 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n--~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~- 149 (549)
+..-.-.+..|+.|.+.+..++ .+ ..+..+++| +.|.++.| ++.+.++-....+++|++|++++|+|.. +.+
T Consensus 35 ~~gl~d~~~~le~ls~~n~glt-t~-~~~P~Lp~L-kkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl 109 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLT-TL-TNFPKLPKL-KKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTL 109 (260)
T ss_pred cccccccccchhhhhhhcccee-ec-ccCCCcchh-hhhcccCCcccccccceehhhhCCceeEEeecCCcccc--cccc
Confidence 4444555667777777777766 22 235567788 88888888 5555555555566888888888888862 333
Q ss_pred --ccCCCCCCEEecccCccee
Q 039925 150 --LSNLRSLFYDNINRNEFSG 168 (549)
Q Consensus 150 --~~~l~~L~~L~L~~n~l~~ 168 (549)
+..+.+|..|++.+|..+.
T Consensus 110 ~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 110 RPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred chhhhhcchhhhhcccCCccc
Confidence 3445667777777776553
No 472
>PRK10345 hypothetical protein; Provisional
Probab=96.74 E-value=0.0036 Score=57.95 Aligned_cols=39 Identities=15% Similarity=0.259 Sum_probs=29.1
Q ss_pred EEEEee--cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHH-HHhh
Q 039925 437 AVVFDY--MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAI-EYLR 484 (549)
Q Consensus 437 ~lv~ey--~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl-~yLH 484 (549)
.+|+|| +++|+|.+++... .++.. ..++.++..++ +|||
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~-------~~~e~--~~~~~~~L~~l~~yLh 122 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC-------RYEED--VAQLRQLLKKLKRYLL 122 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc-------cccHh--HHHHHHHHHHHHHHHH
Confidence 378999 6689999999653 24444 35677888777 9999
No 473
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.70 E-value=0.002 Score=64.67 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=64.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEecc--cc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGT--DF 430 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~--~~ 430 (549)
..+.|-..+.||=|.|.+||.+....+.. +...... ..
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 34567778899999999999998765542 1111111 12
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++.++++|+||. |-+|.++|.... -+.++.....+||+||..||.|||
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~----YrGlpl~~VK~I~~qvL~GLdYLH 204 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSN----YRGLPLSCVKEICRQVLTGLDYLH 204 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhC----CCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3457889999996 558889988654 345888889999999999999999
No 474
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=96.56 E-value=0.0051 Score=56.53 Aligned_cols=38 Identities=16% Similarity=0.055 Sum_probs=29.8
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++++|.+.... .....++.++++++.++|
T Consensus 105 ~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh 142 (198)
T cd05144 105 RHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAY 142 (198)
T ss_pred CceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHH
Confidence 45899999999998776431 123568899999999999
No 475
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.50 E-value=0.00019 Score=66.70 Aligned_cols=95 Identities=18% Similarity=0.183 Sum_probs=61.3
Q ss_pred ceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceeccc-ccccccc-cceeeCCC
Q 039925 109 TKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIP-SFIFNIS-LKWNFLPE 186 (549)
Q Consensus 109 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~-L~~L~l~~ 186 (549)
+.|+..+|.|.++ .....|+.|++|.|+-|+|+..- .+..+++|++|+|..|.|...-. ..+.+++ |+.|+|..
T Consensus 22 kKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~E 97 (388)
T KOG2123|consen 22 KKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDE 97 (388)
T ss_pred hhhcccCCCccHH--HHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhcc
Confidence 6667777766543 23456778888888888887432 36778888888888887763221 3456777 88888888
Q ss_pred CcCcccCchhhh----hcCCCCcEe
Q 039925 187 NSFTGNLPLEIG----VTLPKGRNY 207 (549)
Q Consensus 187 n~l~~~~p~~~~----~~l~~L~~L 207 (549)
|.-.+..+.... ..||+|+.|
T Consensus 98 NPCc~~ag~nYR~~VLR~LPnLkKL 122 (388)
T KOG2123|consen 98 NPCCGEAGQNYRRKVLRVLPNLKKL 122 (388)
T ss_pred CCcccccchhHHHHHHHHcccchhc
Confidence 877665554322 245555544
No 476
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=96.46 E-value=0.00038 Score=64.34 Aligned_cols=81 Identities=21% Similarity=0.240 Sum_probs=56.8
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCce
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
.++......||.|+||+|+|-..+. |.+ +|++.. ++.
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGd 137 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGD 137 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCc
Confidence 3455666789999999999876543 332 566666 677
Q ss_pred EEEEEeecCCCCcc---cccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLE---DWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~---~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++-||.|.- |+. ++.+... ...++..-.-+|+.-..+||.||-
T Consensus 138 cWiCMELMd~-SlDklYk~vy~vq----~~~ipE~Ilg~ItvatV~AL~yLK 184 (361)
T KOG1006|consen 138 CWICMELMDI-SLDKLYKRVYSVQ----KSRIPENILGHITVATVDALDYLK 184 (361)
T ss_pred eeeeHHHHhh-hHHHHHHHHHHHH----hccCcHhhhhheeeeehhHHHHHH
Confidence 8889999864 443 3333322 245777777788888899999995
No 477
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.19 E-value=0.00021 Score=66.47 Aligned_cols=100 Identities=21% Similarity=0.316 Sum_probs=63.7
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccc-ccccCCCCCCCE
Q 039925 56 FGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQL-LDFIGNPSAIQV 134 (549)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~-~~~~~~l~~L~~ 134 (549)
+.+.+.|+..++.+++ +. -..+++.|++|.||-|+|+. + ..+..|++| +.|+|..|.|...- -..+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~D-Is-ic~kMp~lEVLsLSvNkIss-L-~pl~rCtrL-kElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDD-IS-ICEKMPLLEVLSLSVNKISS-L-APLQRCTRL-KELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccH-HH-HHHhcccceeEEeecccccc-c-hhHHHHHHH-HHHHHHhcccccHHHHHHHhcCchhhh
Confidence 4566777888887773 21 23567888888888888873 2 236777888 88888888776431 123566777777
Q ss_pred EEeecceeeeeCCc-----cccCCCCCCEEe
Q 039925 135 MIFKENSLEGKFPN-----TLSNLRSLFYDN 160 (549)
Q Consensus 135 L~L~~n~l~~~~p~-----~~~~l~~L~~L~ 160 (549)
|.|..|.-.+.-+. .+.-|++|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 77777766654432 233455555554
No 478
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=95.95 E-value=0.0038 Score=61.58 Aligned_cols=84 Identities=30% Similarity=0.370 Sum_probs=62.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC---Cce-------------------------eEEEe-----ccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE---KWT-------------------------AGYSE-----GTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~~-------------------------~g~~~-----~~~~~~~~~~~l 438 (549)
...+.|...+.||.|.|++||+++... ... .|... .-....++...+
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i 112 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI 112 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence 345567888999999999999998754 111 11100 001234788999
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+||++.-...++... ++......+.+....||.|+|
T Consensus 113 vlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h 149 (418)
T KOG1167|consen 113 VLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLH 149 (418)
T ss_pred EecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhh
Confidence 9999999999888763 567777889999999999999
No 479
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=95.95 E-value=0.0028 Score=63.94 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=65.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------eEEEecc------ccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------AGYSEGT------DFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------~g~~~~~------~~~~~~~~~ 437 (549)
....++.....||-||||.|-......... ...+... .++...+.|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 445566667779999999999988765542 1112110 134467889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+.||-|-||.+-..|++++ .++-....-++..|.+|++|||
T Consensus 497 mLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH 537 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLH 537 (732)
T ss_pred hhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHH
Confidence 9999999999999999765 6777777778899999999999
No 480
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.94 E-value=0.016 Score=57.80 Aligned_cols=84 Identities=26% Similarity=0.313 Sum_probs=60.3
Q ss_pred cCcCCCccccCceecEEEEEeCCCc---e-------------------------e-------EEEeccc-c-CCCceEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKW---T-------------------------A-------GYSEGTD-F-KGIDFKAV 438 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~---~-------------------------~-------g~~~~~~-~-~~~~~~~l 438 (549)
.|.....||+|+||.||.+...... . . +++.-.+ . ..+.+.++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 7899999999999999999965432 1 0 0000000 1 12456788
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+. -+-+|.++..... ...++-.+.++||.|+..+++|+|
T Consensus 99 VM~l-~G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 99 VMSL-LGPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLH 139 (322)
T ss_pred EEec-cCccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHH
Confidence 8885 5678888764332 457899999999999999999999
No 481
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.93 E-value=0.0078 Score=57.73 Aligned_cols=83 Identities=25% Similarity=0.418 Sum_probs=57.0
Q ss_pred cCcCCCccccCceecEEEEE-e-CCCce-----------------------eEEEeccc---c--CCCceEEEEEeecCC
Q 039925 396 EFSSSNMIGQGSFGSVYKGI-L-GEKWT-----------------------AGYSEGTD---F--KGIDFKAVVFDYMQN 445 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~-~-~~~~~-----------------------~g~~~~~~---~--~~~~~~~lv~ey~~~ 445 (549)
+|..++.||+|+||+++.|+ + .+..| ++.|..+. | .....-.||+|.. |
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence 78999999999999999997 2 32222 11111100 0 0023446888865 5
Q ss_pred CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 446 RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 446 GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
-||+|+..-.+ ..|+.++.+.||.|...-++|+|
T Consensus 108 PSLEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH 141 (449)
T KOG1165|consen 108 PSLEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVH 141 (449)
T ss_pred cCHHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHH
Confidence 57777655332 56999999999999999999999
No 482
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=95.86 E-value=0.0019 Score=58.45 Aligned_cols=85 Identities=14% Similarity=0.238 Sum_probs=58.4
Q ss_pred ccccccCcCCCccccCceecEEEEEeCCCc--e-----------------------eEE------EeccccCCCceEEEE
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGEKW--T-----------------------AGY------SEGTDFKGIDFKAVV 439 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~-----------------------~g~------~~~~~~~~~~~~~lv 439 (549)
|-..++|...+.+|+|.|+.|+.|.--... + .|. ..-..-+......||
T Consensus 34 wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 34 WGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred ccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 566778888999999999999999842222 1 010 000001113456899
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||+.+-+....-. +++-....-+..++..||.|+|
T Consensus 114 FE~v~n~Dfk~ly~---------tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP---------TLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred hhhhccccHHHHhh---------hhchhhHHHHHHHHHHHHhHHH
Confidence 99999887665532 4556667778999999999999
No 483
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=95.83 E-value=0.0056 Score=58.65 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=39.1
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
......++|||+-|++..+|++.+ .....+....-.+++-||..|+.|||
T Consensus 144 ~~rviFiteymssgs~~~fLkrt~--~~~~a~~~~~wkkw~tqIlsal~yLh 193 (458)
T KOG1266|consen 144 KPRVIFITEYMSSGSLKQFLKRTK--KNQKALFQKAWKKWCTQILSALSYLH 193 (458)
T ss_pred ccceEEEEecccchhHHHHHHHHH--HhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence 567788999999999999998655 11234444444679999999999999
No 484
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=95.82 E-value=0.018 Score=52.19 Aligned_cols=42 Identities=7% Similarity=0.006 Sum_probs=28.9
Q ss_pred eEEEEEeecCCCCcccc-cccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDW-PYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~-l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|++... +.... .. .....++.+++.++.++|
T Consensus 89 ~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh 131 (187)
T cd05119 89 RHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLY 131 (187)
T ss_pred CCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHh
Confidence 34799999999765422 22111 11 456788999999999999
No 485
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=95.78 E-value=0.0038 Score=55.79 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=59.3
Q ss_pred cccccCcCCCccccCceecEEEEEe-CCCce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGIL-GEKWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
.+.++......||+|+||.|-+-++ ..|.+ +|+... +
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-----e 117 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-----E 117 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----c
Confidence 4556667777899999999987665 33433 333333 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++.||.|.- ||..+-+..- ..+...+....-+||..|.+||.|||
T Consensus 118 gdvwIcME~M~t-Sldkfy~~v~--~~g~~ipE~vlGkIa~Svv~al~~L~ 165 (282)
T KOG0984|consen 118 GDVWICMELMDT-SLDKFYRKVL--KKGGTIPEDVLGKIAVSVVHALEFLH 165 (282)
T ss_pred ccEEEeHHHhhh-hHHHHHHHHH--hcCCcCchHHhhHhHHHHHHHHHHHH
Confidence 778899998875 6655533211 02346778888899999999999999
No 486
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.76 E-value=0.0085 Score=54.91 Aligned_cols=86 Identities=28% Similarity=0.368 Sum_probs=60.5
Q ss_pred ccccCcCCCccccCceecEEEEEe-CCCce----------------------------eEEEecc-ccCCCceEEEEEee
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGIL-GEKWT----------------------------AGYSEGT-DFKGIDFKAVVFDY 442 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----------------------------~g~~~~~-~~~~~~~~~lv~ey 442 (549)
..+.|...+.||.|+||.+|.|.. ..|.. .|.-.-. -...+.+-.+|||.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 345677788899999999999985 33332 1100000 01115566899997
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
. +-||++...-.. ..++..+.+-.|-|+..-++|+|
T Consensus 93 L-GPsLEdLfnfC~-----R~ftmkTvLMLaDQml~RiEyvH 128 (341)
T KOG1163|consen 93 L-GPSLEDLFNFCS-----RRFTMKTVLMLADQMLSRIEYVH 128 (341)
T ss_pred c-CccHHHHHHHHh-----hhhhHHhHHHHHHHHHHHHHHHH
Confidence 5 668888876433 46888999999999999999999
No 487
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=95.59 E-value=0.041 Score=47.32 Aligned_cols=67 Identities=13% Similarity=0.151 Sum_probs=48.6
Q ss_pred CCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEEEeecCC
Q 039925 400 SNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVVFDYMQN 445 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv~ey~~~ 445 (549)
.+.||+|.++.||++...+..+ .++.. ..+..+++|||+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-----~~~~~~~v~e~~~g 77 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGE-----SDGWSYLLMEWIEG 77 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcC-----CCCccEEEEEecCC
Confidence 4579999999999998755333 01111 12457899999998
Q ss_pred CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 446 RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 446 GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+.+..+ ++.....++.+++++++++|
T Consensus 78 ~~~~~~-------------~~~~~~~~~~~~~~~l~~lh 103 (155)
T cd05120 78 ETLDEV-------------SEEEKEDIAEQLAELLAKLH 103 (155)
T ss_pred eecccC-------------CHHHHHHHHHHHHHHHHHHh
Confidence 877654 34556778999999999999
No 488
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.50 E-value=0.0055 Score=33.95 Aligned_cols=12 Identities=50% Similarity=0.816 Sum_probs=4.8
Q ss_pred CCEeeccccccc
Q 039925 83 LEYLLLANNHFS 94 (549)
Q Consensus 83 L~~L~Ls~n~l~ 94 (549)
|++|+|++|+|+
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 334444444443
No 489
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=95.40 E-value=0.00059 Score=61.87 Aligned_cols=86 Identities=15% Similarity=0.141 Sum_probs=50.6
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
.+..+...+.||++.|++. .+-..|+-++.|..|+++.|.+. .+|..++++..+ .++++..|+.+ ..|.+++..++
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~-~~~~~~~n~~~-~~p~s~~k~~~ 112 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRET-VNAASHKNNHS-QQPKSQKKEPH 112 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHH-HHHHhhccchh-hCCccccccCC
Confidence 4455566667777776665 45555666666666677666666 566666666666 66665555554 34444444454
Q ss_pred CCEEEeecce
Q 039925 132 IQVMIFKENS 141 (549)
Q Consensus 132 L~~L~L~~n~ 141 (549)
++++++..|.
T Consensus 113 ~k~~e~k~~~ 122 (326)
T KOG0473|consen 113 PKKNEQKKTE 122 (326)
T ss_pred cchhhhccCc
Confidence 4444444444
No 490
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.31 E-value=0.0072 Score=33.47 Aligned_cols=22 Identities=32% Similarity=0.644 Sum_probs=18.2
Q ss_pred CCCEEEccCCcceecCCccccCC
Q 039925 58 YLRFINLVDNNFRGEIPEKVGRL 80 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~~~~~l 80 (549)
+|++|||++|+|+ .+|..|++|
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSNL 22 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT-
T ss_pred CccEEECCCCcCE-eCChhhcCC
Confidence 5899999999999 888877654
No 491
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=95.28 E-value=0.023 Score=55.97 Aligned_cols=44 Identities=11% Similarity=0.109 Sum_probs=31.2
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+...|+||.-.+. +|+.++-... .+...+.-|..|..+|..|||
T Consensus 315 ~~tlylvMkrY~~-tLr~yl~~~~-------~s~r~~~~~laQlLEav~hL~ 358 (598)
T KOG4158|consen 315 PKTLYLVMKRYRQ-TLREYLWTRH-------RSYRTGRVILAQLLEAVTHLH 358 (598)
T ss_pred CceEEEehhcchh-hHHHHHhcCC-------CchHHHHHHHHHHHHHHHHHH
Confidence 4456788765544 7887776433 444555568899999999999
No 492
>PRK12274 serine/threonine protein kinase; Provisional
Probab=95.28 E-value=0.033 Score=51.05 Aligned_cols=75 Identities=12% Similarity=0.073 Sum_probs=47.6
Q ss_pred CcCCCccccCceecEEEEEeCCCce-----------------------------eEEEe-ccccCCCceEEEEEeecCCC
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKWT-----------------------------AGYSE-GTDFKGIDFKAVVFDYMQNR 446 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------~g~~~-~~~~~~~~~~~lv~ey~~~G 446 (549)
+.....|++|+||+||.+.-++..+ ++... ......-...+++|||+++.
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~ 83 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGA 83 (218)
T ss_pred cccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCc
Confidence 3456789999999999776655444 10000 00000012358999999999
Q ss_pred CcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 447 SLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 447 sL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|+..+.. ....+..+++++++|+|
T Consensus 84 ~L~~~~~~-------------~~~~~~~qi~~~L~~lH 108 (218)
T PRK12274 84 AMYQRPPR-------------GDLAYFRAARRLLQQLH 108 (218)
T ss_pred cHHhhhhh-------------hhHHHHHHHHHHHHHHH
Confidence 98754321 11346789999999999
No 493
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=95.04 E-value=0.065 Score=49.86 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=36.1
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++++++.+.+.. ..++..++..++.++++++.+||
T Consensus 74 ~~~~v~e~i~G~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH 116 (223)
T cd05154 74 TPFYVMERVDGRVLRDRLLR-------PELSPEERRALARALADTLAALH 116 (223)
T ss_pred CceEEEEEeCCEecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 45899999999998887642 13677888899999999999999
No 494
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=94.87 E-value=0.039 Score=51.56 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=52.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-------------------------------------------eEEEeccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------------AGYSEGTD 429 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------------~g~~~~~~ 429 (549)
..+.|...+++|.|+||.||......+.+ ..+....+
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 45678888999999999999976543332 11111100
Q ss_pred c---CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 F---KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~---~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
. ......++||||++|.+|.++.. ++. ....+++.++..+|
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH 152 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLH 152 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHH
Confidence 0 11235789999999999988732 121 24568999999999
No 495
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.73 E-value=0.00016 Score=75.15 Aligned_cols=64 Identities=31% Similarity=0.351 Sum_probs=35.6
Q ss_pred ccEEEcCCCcccccCCCcCccccCCc-cccCeeeccCcccccc----CCccccCCCCCCEEEccCCccc
Q 039925 251 LYALTMVKNKLSGPIPHHIASSLGNL-TLLTYLALDNNKLQGN----LPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 251 L~~L~L~~n~l~~~~p~~l~~~l~~l-~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
+..|++..|.+.+..-..+...+..+ ..++.++++.|.|+.. +...+..++.++.+.+++|.+.
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 44466666665533222223344444 5667777777777643 2334455667777777777665
No 496
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.42 E-value=0.00032 Score=72.88 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=46.3
Q ss_pred ccEEEccccccccccCh----hhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccc
Q 039925 225 ATIIAMGGNQISGTITL----GIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQG 291 (549)
Q Consensus 225 L~~L~l~~n~l~~~~~~----~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (549)
+..|++..|.+.+.... .+..+. ..++.++++.|.|+......+...+..++.+++|.+++|.+..
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~-~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLS-ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccc-hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 55578888877644211 121111 4568889999998876666667777888899999999998874
No 497
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=94.41 E-value=0.023 Score=53.89 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=28.1
Q ss_pred EEEEeecCC-CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQN-RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~-GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++ ++|.+++... +++. ....++++++.+||
T Consensus 122 ~lV~e~l~G~~~L~~~l~~~-------~l~~----~~~~~i~~~l~~lH 159 (239)
T PRK01723 122 DILIERIEGARDLVALLQEA-------PLSE----EQWQAIGQLIARFH 159 (239)
T ss_pred eEEEEecCCCCCHHHHHhcC-------CCCH----HHHHHHHHHHHHHH
Confidence 599999997 6898887642 2333 23578999999999
No 498
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=94.22 E-value=0.0014 Score=59.55 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=65.9
Q ss_pred cccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCC
Q 039925 76 KVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRS 155 (549)
Q Consensus 76 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 155 (549)
.+....+.+.||++.|++. .+-..|..++.+ ..|+++.|++. .+|..++.+..+..+++..|.++ ..|.+++..+.
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~-~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~ 112 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRL-VRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPH 112 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHH-HHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCC
Confidence 4566677888888888877 556667777777 88888888876 56777777777777777777776 67777777777
Q ss_pred CCEEecccCcce
Q 039925 156 LFYDNINRNEFS 167 (549)
Q Consensus 156 L~~L~L~~n~l~ 167 (549)
++++++-+|.+.
T Consensus 113 ~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 113 PKKNEQKKTEFF 124 (326)
T ss_pred cchhhhccCcch
Confidence 777777777654
No 499
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=94.08 E-value=0.12 Score=53.65 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=20.0
Q ss_pred cCcCCCccccCceecEEEEEeCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT 421 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~ 421 (549)
.|+ .+-||.|++|.||+|++++|..
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~ 143 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKE 143 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCE
Confidence 344 3579999999999999987664
No 500
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.98 E-value=0.056 Score=27.74 Aligned_cols=12 Identities=42% Similarity=0.537 Sum_probs=4.0
Q ss_pred CCEeeccccccc
Q 039925 83 LEYLLLANNHFS 94 (549)
Q Consensus 83 L~~L~Ls~n~l~ 94 (549)
|+.|+|++|+++
T Consensus 3 L~~L~l~~n~L~ 14 (17)
T PF13504_consen 3 LRTLDLSNNRLT 14 (17)
T ss_dssp -SEEEETSS--S
T ss_pred cCEEECCCCCCC
Confidence 444444444443
Done!