Query 039925
Match_columns 549
No_of_seqs 666 out of 3967
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 04:51:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039925hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 6.9E-42 2.4E-46 339.3 24.6 296 2-354 6-308 (313)
2 3rgz_A Protein brassinosteroid 100.0 2.1E-40 7.3E-45 367.9 24.5 304 2-318 12-385 (768)
3 4eco_A Uncharacterized protein 100.0 1.1E-39 3.8E-44 354.2 22.4 304 2-315 30-527 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 2.4E-38 8.1E-43 350.1 22.4 331 2-349 269-818 (876)
5 3rgz_A Protein brassinosteroid 100.0 6.5E-37 2.2E-41 339.9 24.5 110 250-368 633-754 (768)
6 3v47_A TOLL-like receptor 5B a 100.0 4.7E-34 1.6E-38 298.3 22.4 125 223-354 275-412 (455)
7 4fcg_A Uncharacterized protein 100.0 8.2E-35 2.8E-39 290.1 14.4 272 2-315 27-315 (328)
8 2id5_A Lingo-1, leucine rich r 100.0 2E-32 7E-37 287.7 25.1 309 32-353 12-336 (477)
9 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-31 5.4E-36 286.0 24.4 147 30-178 3-172 (549)
10 3vq2_A TLR4, TOLL-like recepto 100.0 3.1E-31 1.1E-35 287.1 25.6 127 47-174 46-173 (606)
11 3o6n_A APL1; leucine-rich repe 100.0 1.2E-31 4.3E-36 274.2 20.9 317 20-352 2-354 (390)
12 1ogq_A PGIP-2, polygalacturona 100.0 4.6E-32 1.6E-36 268.6 16.2 242 43-315 60-306 (313)
13 3oja_B Anopheles plasmodium-re 100.0 1.9E-31 6.5E-36 287.8 22.0 314 19-352 7-360 (597)
14 4g8a_A TOLL-like receptor 4; l 100.0 4.2E-31 1.4E-35 287.4 23.4 171 19-195 11-191 (635)
15 3v47_A TOLL-like receptor 5B a 100.0 6.6E-31 2.3E-35 274.5 21.5 278 47-331 44-412 (455)
16 2id5_A Lingo-1, leucine rich r 100.0 8.2E-31 2.8E-35 275.5 21.8 304 43-355 42-361 (477)
17 4eco_A Uncharacterized protein 100.0 3.6E-31 1.2E-35 287.3 19.0 308 7-336 32-478 (636)
18 3t6q_A CD180 antigen; protein- 100.0 1.9E-30 6.5E-35 281.0 21.9 288 58-353 255-563 (606)
19 4ecn_A Leucine-rich repeat pro 100.0 1.7E-30 5.7E-35 287.5 19.8 294 43-351 435-841 (876)
20 3t6q_A CD180 antigen; protein- 100.0 7.5E-30 2.6E-34 276.3 23.8 284 33-330 14-365 (606)
21 3j0a_A TOLL-like receptor 5; m 100.0 4.8E-30 1.7E-34 287.6 21.9 82 271-353 474-563 (844)
22 3o6n_A APL1; leucine-rich repe 100.0 6.2E-30 2.1E-34 261.6 20.1 294 47-354 58-378 (390)
23 3oja_B Anopheles plasmodium-re 100.0 4.9E-30 1.7E-34 276.7 20.0 302 47-362 64-392 (597)
24 2z80_A TOLL-like receptor 2, v 100.0 7.7E-31 2.6E-35 264.6 12.0 286 22-317 21-317 (353)
25 2z7x_B TOLL-like receptor 1, v 100.0 7E-30 2.4E-34 271.4 19.5 275 49-334 37-440 (520)
26 1xku_A Decorin; proteoglycan, 100.0 2.6E-29 9E-34 250.9 22.1 246 30-316 30-278 (330)
27 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-29 5.3E-34 271.2 20.8 285 34-334 34-469 (562)
28 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-29 7E-34 251.9 19.8 245 31-316 33-279 (332)
29 2z63_A TOLL-like receptor 4, v 100.0 8.4E-29 2.9E-33 266.0 25.7 143 47-190 42-190 (570)
30 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-28 5.6E-33 269.5 27.6 300 49-353 264-625 (680)
31 2z66_A Variable lymphocyte rec 100.0 1.8E-29 6E-34 249.4 17.9 250 31-315 7-262 (306)
32 3j0a_A TOLL-like receptor 5; m 100.0 3E-29 1E-33 281.2 20.6 261 47-315 38-352 (844)
33 1ziw_A TOLL-like receptor 3; i 100.0 1.4E-28 4.7E-33 270.1 24.1 274 31-314 4-309 (680)
34 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-28 4E-33 264.3 21.6 293 45-353 64-513 (562)
35 3vq2_A TLR4, TOLL-like recepto 100.0 4.3E-28 1.5E-32 262.5 23.9 163 29-197 5-173 (606)
36 2z81_A CD282 antigen, TOLL-lik 100.0 9.3E-29 3.2E-33 264.5 17.8 152 57-210 26-180 (549)
37 3zyi_A Leucine-rich repeat-con 100.0 4.1E-28 1.4E-32 253.0 21.9 247 33-315 56-304 (452)
38 2z7x_B TOLL-like receptor 1, v 100.0 9.6E-29 3.3E-33 262.6 16.1 283 36-334 5-394 (520)
39 3zyj_A Leucine-rich repeat-con 100.0 6.8E-28 2.3E-32 250.4 21.9 247 33-315 45-293 (440)
40 2z63_A TOLL-like receptor 4, v 99.9 4.3E-27 1.5E-31 252.7 21.8 163 35-204 11-175 (570)
41 4fmz_A Internalin; leucine ric 99.9 1.1E-26 3.7E-31 233.6 23.0 271 52-348 61-344 (347)
42 1wwl_A Monocyte differentiatio 99.9 5.3E-29 1.8E-33 246.5 4.3 246 53-315 39-310 (312)
43 3zyi_A Leucine-rich repeat-con 99.9 1.7E-26 5.9E-31 240.7 21.6 251 58-353 55-306 (452)
44 1xku_A Decorin; proteoglycan, 99.9 2E-26 6.8E-31 230.0 20.8 234 45-314 64-306 (330)
45 4fmz_A Internalin; leucine ric 99.9 2.8E-26 9.7E-31 230.5 21.8 257 48-328 80-346 (347)
46 4fcg_A Uncharacterized protein 99.9 8.6E-27 2.9E-31 232.1 17.6 222 79-334 79-312 (328)
47 4g8a_A TOLL-like receptor 4; l 99.9 3.8E-26 1.3E-30 248.3 23.6 300 48-353 66-583 (635)
48 2ft3_A Biglycan; proteoglycan, 99.9 2.7E-26 9.3E-31 229.2 20.5 233 45-314 66-307 (332)
49 1o6v_A Internalin A; bacterial 99.9 8.9E-26 3.1E-30 236.2 24.5 256 49-330 61-346 (466)
50 3zyj_A Leucine-rich repeat-con 99.9 7.1E-26 2.4E-30 235.2 21.8 250 59-353 45-295 (440)
51 1ozn_A Reticulon 4 receptor; N 99.9 9.5E-27 3.3E-31 227.3 13.8 213 48-315 25-239 (285)
52 1ozn_A Reticulon 4 receptor; N 99.9 4.9E-26 1.7E-30 222.3 18.7 227 60-353 14-241 (285)
53 2z66_A Variable lymphocyte rec 99.9 7E-26 2.4E-30 223.5 19.5 248 60-352 10-263 (306)
54 3o53_A Protein LRIM1, AGAP0063 99.9 1.9E-27 6.5E-32 235.9 7.9 221 52-314 29-250 (317)
55 1o6v_A Internalin A; bacterial 99.9 2.4E-25 8.3E-30 232.9 22.9 277 48-351 82-389 (466)
56 3bz5_A Internalin-J, INLJ; leu 99.9 1.8E-25 6.2E-30 232.5 20.8 236 52-318 59-303 (457)
57 2o6q_A Variable lymphocyte rec 99.9 1.9E-25 6.6E-30 216.2 19.3 217 28-315 2-219 (270)
58 3bz5_A Internalin-J, INLJ; leu 99.9 3.1E-25 1.1E-29 230.7 22.0 252 50-332 35-304 (457)
59 3oja_A Leucine-rich immune mol 99.9 1.3E-26 4.5E-31 243.1 10.1 218 55-314 32-250 (487)
60 2z80_A TOLL-like receptor 2, v 99.9 2.2E-25 7.4E-30 224.7 16.1 239 48-294 66-318 (353)
61 1jl5_A Outer protein YOPM; leu 99.9 3.7E-25 1.3E-29 230.0 16.5 195 47-263 24-251 (454)
62 1wwl_A Monocyte differentiatio 99.9 1.6E-26 5.5E-31 228.7 5.6 228 49-291 57-310 (312)
63 2z62_A TOLL-like receptor 4, v 99.9 1.2E-24 4E-29 211.4 18.3 225 35-318 11-241 (276)
64 2z62_A TOLL-like receptor 4, v 99.9 2.1E-24 7.1E-29 209.7 20.0 224 62-353 12-240 (276)
65 3g06_A SSPH2 (leucine-rich rep 99.9 5.4E-25 1.8E-29 235.8 14.7 256 19-318 10-301 (622)
66 3o53_A Protein LRIM1, AGAP0063 99.9 6.4E-25 2.2E-29 217.7 11.8 219 58-319 11-231 (317)
67 1jl5_A Outer protein YOPM; leu 99.9 3.8E-24 1.3E-28 222.3 15.7 259 55-348 9-288 (454)
68 3oja_A Leucine-rich immune mol 99.9 6.6E-24 2.3E-28 222.6 14.4 220 79-353 32-253 (487)
69 3rfs_A Internalin B, repeat mo 99.9 1.4E-23 4.7E-28 203.3 14.2 203 54-319 38-240 (272)
70 2xwt_C Thyrotropin receptor; s 99.9 6.4E-23 2.2E-27 194.6 17.0 204 47-312 24-237 (239)
71 3g06_A SSPH2 (leucine-rich rep 99.9 3.3E-22 1.1E-26 214.2 24.5 247 57-350 40-297 (622)
72 1p9a_G Platelet glycoprotein I 99.9 8.3E-23 2.8E-27 199.5 18.0 203 53-315 6-209 (290)
73 2ca6_A RAN GTPase-activating p 99.9 2.7E-25 9.1E-30 226.8 -0.1 250 48-317 23-319 (386)
74 1p9a_G Platelet glycoprotein I 99.9 1.3E-22 4.3E-27 198.2 18.5 206 76-353 5-211 (290)
75 4ay9_X Follicle-stimulating ho 99.9 5.7E-23 1.9E-27 206.6 16.4 243 31-312 9-257 (350)
76 2o6q_A Variable lymphocyte rec 99.9 1.6E-22 5.4E-27 195.7 17.8 211 22-262 5-218 (270)
77 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.7E-29 220.3 1.6 254 44-316 9-299 (362)
78 1z7x_W Ribonuclease inhibitor; 99.9 3.4E-25 1.2E-29 231.5 -2.1 296 48-348 47-409 (461)
79 4glp_A Monocyte differentiatio 99.9 8.1E-23 2.8E-27 201.9 13.6 227 57-315 64-308 (310)
80 3rfs_A Internalin B, repeat mo 99.9 1.1E-22 3.7E-27 197.1 12.8 179 126-334 59-242 (272)
81 3m19_A Variable lymphocyte rec 99.9 2.9E-22 1E-26 191.6 14.4 141 29-190 3-144 (251)
82 1z7x_W Ribonuclease inhibitor; 99.9 2.1E-24 7.2E-29 225.5 -1.3 89 224-314 314-411 (461)
83 4glp_A Monocyte differentiatio 99.9 2E-22 6.9E-27 199.0 11.7 204 56-291 90-308 (310)
84 2ast_B S-phase kinase-associat 99.9 1.7E-23 5.9E-28 209.2 4.1 217 59-287 49-282 (336)
85 1h6u_A Internalin H; cell adhe 99.9 1.6E-21 5.5E-26 192.2 15.1 194 54-315 38-231 (308)
86 3goz_A Leucine-rich repeat-con 99.9 3.7E-23 1.2E-27 209.0 2.7 236 61-315 2-267 (362)
87 2o6s_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 182.8 11.3 182 30-246 6-188 (208)
88 3cvr_A Invasion plasmid antige 99.9 4.9E-22 1.7E-26 210.4 10.7 208 20-300 32-253 (571)
89 2xwt_C Thyrotropin receptor; s 99.9 2.8E-21 9.6E-26 183.3 14.5 189 72-315 25-219 (239)
90 3m19_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 180.5 16.7 180 81-316 14-194 (251)
91 3e6j_A Variable lymphocyte rec 99.8 5.2E-21 1.8E-25 180.1 13.5 167 21-194 9-176 (229)
92 2ca6_A RAN GTPase-activating p 99.8 1E-22 3.4E-27 207.7 0.0 230 63-315 15-288 (386)
93 2ast_B S-phase kinase-associat 99.8 1.8E-21 6.2E-26 194.5 7.0 237 50-299 61-315 (336)
94 4asz_A BDNF/NT-3 growth factor 99.8 2.6E-21 8.9E-26 188.6 5.8 148 392-544 10-291 (299)
95 3omv_A RAF proto-oncogene seri 99.8 3.5E-21 1.2E-25 187.8 6.5 143 393-546 34-304 (307)
96 4gt4_A Tyrosine-protein kinase 99.8 2.7E-21 9.3E-26 189.3 5.1 142 394-540 25-304 (308)
97 4ay9_X Follicle-stimulating ho 99.8 1.4E-19 4.7E-24 181.8 17.0 225 60-318 12-240 (350)
98 4aoj_A High affinity nerve gro 99.8 7.3E-21 2.5E-25 188.0 7.2 147 392-543 38-320 (329)
99 2v9t_B SLIT homolog 2 protein 99.8 4.8E-20 1.6E-24 172.3 12.4 155 31-191 11-166 (220)
100 2v70_A SLIT-2, SLIT homolog 2 99.8 2.4E-19 8.3E-24 167.5 13.1 158 31-194 11-170 (220)
101 2o6s_A Variable lymphocyte rec 99.8 2.3E-19 7.7E-24 166.3 12.6 127 60-190 10-137 (208)
102 1h6u_A Internalin H; cell adhe 99.8 6.7E-19 2.3E-23 173.4 14.8 131 48-190 55-186 (308)
103 3hmm_A TGF-beta receptor type- 99.8 1.1E-19 3.9E-24 178.0 7.2 82 395-484 3-117 (303)
104 2xot_A Amphoterin-induced prot 99.8 6.4E-19 2.2E-23 177.7 12.6 181 31-237 18-203 (361)
105 4b8c_D Glucose-repressible alc 99.8 5.1E-20 1.8E-24 201.8 4.7 185 2-198 132-337 (727)
106 2xot_A Amphoterin-induced prot 99.8 1.5E-18 5E-23 175.1 14.5 178 60-262 21-202 (361)
107 3ogk_B Coronatine-insensitive 99.8 4.7E-20 1.6E-24 198.7 0.8 253 54-314 161-501 (592)
108 4ase_A Vascular endothelial gr 99.8 1.8E-19 6E-24 179.6 4.6 148 392-543 61-348 (353)
109 1h6t_A Internalin B; cell adhe 99.8 3.3E-18 1.1E-22 167.0 13.5 172 78-315 43-214 (291)
110 1h6t_A Internalin B; cell adhe 99.8 3.2E-18 1.1E-22 167.1 12.6 127 53-190 42-169 (291)
111 1m9s_A Internalin B; cell inva 99.8 5E-18 1.7E-22 181.6 14.4 172 53-263 39-211 (605)
112 3cvr_A Invasion plasmid antige 99.7 3.3E-18 1.1E-22 181.1 12.5 193 34-278 62-255 (571)
113 1m9s_A Internalin B; cell inva 99.7 4.5E-18 1.5E-22 182.0 13.0 191 57-292 21-212 (605)
114 2v9t_B SLIT homolog 2 protein 99.7 1.5E-17 5.2E-22 155.3 13.2 152 60-237 14-166 (220)
115 2v70_A SLIT-2, SLIT homolog 2 99.7 1.6E-17 5.5E-22 155.1 13.2 155 60-240 14-170 (220)
116 1w8a_A SLIT protein; signaling 99.7 6.2E-18 2.1E-22 154.4 9.3 135 31-171 8-143 (192)
117 1dce_A Protein (RAB geranylger 99.7 1.7E-19 5.9E-24 191.8 -1.4 190 79-308 347-567 (567)
118 4ezg_A Putative uncharacterize 99.7 1.4E-17 4.6E-22 152.8 10.7 154 53-237 40-195 (197)
119 3e6j_A Variable lymphocyte rec 99.7 6.3E-17 2.2E-21 152.1 14.0 153 60-239 22-175 (229)
120 1dce_A Protein (RAB geranylger 99.7 1.2E-19 4E-24 193.1 -5.5 181 102-318 346-550 (567)
121 4b8c_D Glucose-repressible alc 99.7 5.3E-18 1.8E-22 185.9 6.8 144 49-197 216-361 (727)
122 1xeu_A Internalin C; cellular 99.7 1.1E-17 3.7E-22 160.8 6.5 123 56-190 18-141 (263)
123 4ezg_A Putative uncharacterize 99.7 8.4E-17 2.9E-21 147.5 12.0 106 78-188 41-147 (197)
124 1w8a_A SLIT protein; signaling 99.7 1.4E-16 4.7E-21 145.4 13.3 132 60-195 11-144 (192)
125 1xeu_A Internalin C; cellular 99.7 2.2E-17 7.5E-22 158.6 7.9 170 79-315 17-186 (263)
126 2o6r_A Variable lymphocyte rec 99.7 1.4E-16 4.7E-21 143.4 10.7 135 31-171 7-141 (177)
127 2ell_A Acidic leucine-rich nuc 99.7 7.6E-17 2.6E-21 143.8 8.1 137 55-195 22-164 (168)
128 2wfh_A SLIT homolog 2 protein 99.7 2.8E-16 9.6E-21 143.4 11.2 130 31-167 10-139 (193)
129 3ogk_B Coronatine-insensitive 99.7 2.1E-17 7.3E-22 178.0 3.6 246 30-285 41-326 (592)
130 4g3f_A NF-kappa-beta-inducing 99.7 8.3E-17 2.9E-21 158.4 7.3 81 393-484 56-167 (336)
131 2wfh_A SLIT homolog 2 protein 99.6 7.8E-16 2.7E-20 140.4 12.0 128 60-192 13-141 (193)
132 2qkw_B Protein kinase; three-h 99.6 1.7E-15 5.7E-20 150.1 13.9 87 391-484 35-156 (321)
133 2p1m_B Transport inhibitor res 99.6 4.2E-17 1.4E-21 175.7 2.5 37 176-212 287-324 (594)
134 4b9d_A Serine/threonine-protei 99.6 1E-16 3.5E-21 158.6 4.7 84 392-484 21-142 (350)
135 2je0_A Acidic leucine-rich nuc 99.6 2.5E-16 8.4E-21 137.4 6.3 108 57-167 17-126 (149)
136 2p1m_B Transport inhibitor res 99.6 2.3E-17 7.8E-22 177.8 -2.0 252 53-314 207-519 (594)
137 2o6r_A Variable lymphocyte rec 99.6 3.8E-15 1.3E-19 133.9 11.7 132 59-194 9-141 (177)
138 2je0_A Acidic leucine-rich nuc 99.6 1.3E-15 4.5E-20 132.7 8.2 129 79-210 15-148 (149)
139 2nru_A Interleukin-1 receptor- 99.6 2.3E-15 7.8E-20 148.0 10.8 85 392-484 22-150 (307)
140 2ell_A Acidic leucine-rich nuc 99.6 6.4E-15 2.2E-19 131.2 10.4 113 79-195 22-137 (168)
141 3cbl_A C-FES, proto-oncogene t 99.6 6.7E-16 2.3E-20 156.5 4.1 83 392-484 111-230 (377)
142 3fpq_A Serine/threonine-protei 99.6 8.5E-16 2.9E-20 148.5 4.6 80 398-484 29-146 (290)
143 3sb4_A Hypothetical leucine ri 99.6 2E-15 6.9E-20 150.0 7.4 199 104-315 100-311 (329)
144 3uim_A Brassinosteroid insensi 99.6 1E-14 3.4E-19 144.7 11.4 86 392-484 27-148 (326)
145 1a9n_A U2A', U2A'; complex (nu 99.6 3.6E-15 1.2E-19 134.0 7.1 132 52-190 14-153 (176)
146 1k9a_A Carboxyl-terminal SRC k 99.6 2.6E-15 8.8E-20 155.8 6.8 144 392-543 190-446 (450)
147 3s95_A LIMK-1, LIM domain kina 99.5 6.3E-15 2.2E-19 145.1 8.6 82 393-484 8-125 (310)
148 2qol_A Ephrin receptor; recept 99.5 2.3E-15 8E-20 152.2 5.4 83 392-484 42-164 (373)
149 4fih_A Serine/threonine-protei 99.5 2.1E-15 7.1E-20 148.9 4.3 81 392-484 71-187 (346)
150 3kul_A Ephrin type-A receptor 99.5 3.8E-15 1.3E-19 147.7 5.3 83 392-484 46-168 (325)
151 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.7E-21 146.9 -5.7 135 54-194 15-157 (198)
152 1opk_A P150, C-ABL, proto-onco 99.5 4.2E-15 1.4E-19 156.0 5.6 84 392-484 217-335 (495)
153 4g31_A Eukaryotic translation 99.5 4.1E-15 1.4E-19 144.9 5.1 87 395-484 5-135 (299)
154 3ugc_A Tyrosine-protein kinase 99.5 2.9E-15 1E-19 146.4 2.9 84 393-484 8-131 (295)
155 3kmu_A ILK, integrin-linked ki 99.5 6.2E-15 2.1E-19 141.9 4.8 85 393-484 8-128 (271)
156 4hcu_A Tyrosine-protein kinase 99.5 9.3E-15 3.2E-19 140.7 6.0 82 393-484 8-123 (269)
157 4fie_A Serine/threonine-protei 99.5 4.8E-15 1.6E-19 150.1 4.1 82 391-484 147-264 (423)
158 3ubd_A Ribosomal protein S6 ki 99.5 4.5E-15 1.5E-19 144.2 3.5 80 394-484 23-143 (304)
159 1qcf_A Haematopoetic cell kina 99.5 3.6E-15 1.2E-19 155.0 2.6 83 392-484 185-301 (454)
160 1a9n_A U2A', U2A'; complex (nu 99.5 5.4E-14 1.8E-18 126.2 9.9 114 76-196 14-131 (176)
161 2psq_A Fibroblast growth facto 99.5 1.4E-14 4.7E-19 146.3 6.6 87 393-484 79-220 (370)
162 3c1x_A Hepatocyte growth facto 99.5 1.3E-14 4.5E-19 146.5 5.9 143 396-547 90-360 (373)
163 3lb7_A RAF proto-oncogene seri 99.5 1.2E-14 4.3E-19 142.8 5.5 82 392-484 33-149 (307)
164 3hyh_A Carbon catabolite-derep 99.5 8.8E-15 3E-19 140.2 4.2 78 395-484 13-129 (275)
165 3soc_A Activin receptor type-2 99.5 4.3E-14 1.5E-18 139.9 8.7 84 393-484 22-138 (322)
166 3gen_A Tyrosine-protein kinase 99.5 2E-14 6.8E-19 139.5 5.9 83 392-484 21-137 (283)
167 1luf_A Muscle-specific tyrosin 99.5 1.2E-14 4.2E-19 145.1 4.5 88 392-484 44-191 (343)
168 3sxs_A Cytoplasmic tyrosine-pr 99.5 1E-14 3.4E-19 140.4 3.6 82 393-484 6-121 (268)
169 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.3E-18 123.0 10.3 105 60-168 12-116 (170)
170 1fmk_A C-SRC, P60-SRC, tyrosin 99.5 9.5E-15 3.3E-19 151.6 3.3 83 392-484 181-297 (452)
171 4aw0_A HPDK1, 3-phosphoinositi 99.5 5.8E-15 2E-19 143.5 1.5 81 393-484 30-149 (311)
172 3p86_A Serine/threonine-protei 99.5 1.3E-14 4.3E-19 142.9 3.9 85 392-484 34-154 (309)
173 3l9p_A Anaplastic lymphoma kin 99.5 2E-14 6.8E-19 145.0 5.1 88 392-484 68-198 (367)
174 3f66_A Hepatocyte growth facto 99.5 2.9E-14 1E-18 139.4 6.1 82 394-484 24-145 (298)
175 1ds9_A Outer arm dynein; leuci 99.5 1.3E-15 4.4E-20 139.7 -3.9 135 48-190 39-185 (198)
176 3g2f_A Bone morphogenetic prot 99.5 7.9E-14 2.7E-18 138.8 8.6 86 392-484 10-128 (336)
177 1mqb_A Ephrin type-A receptor 99.5 3.2E-14 1.1E-18 141.6 5.7 82 393-484 42-164 (333)
178 3brb_A Proto-oncogene tyrosine 99.5 4.8E-14 1.6E-18 139.0 6.7 154 392-545 31-311 (313)
179 3t9t_A Tyrosine-protein kinase 99.5 2.8E-14 9.7E-19 137.0 4.9 82 393-484 6-121 (267)
180 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.5E-18 122.9 8.8 107 31-143 9-115 (170)
181 1mp8_A Focal adhesion kinase 1 99.5 4E-14 1.4E-18 137.2 5.9 82 392-484 12-133 (281)
182 2r9u_A Variable lymphocyte rec 99.5 2.4E-13 8.2E-18 121.6 10.3 104 60-167 15-118 (174)
183 3poz_A Epidermal growth factor 99.5 4.7E-14 1.6E-18 140.0 6.3 81 393-484 13-134 (327)
184 3kfa_A Tyrosine-protein kinase 99.4 5E-14 1.7E-18 137.0 6.3 84 392-484 10-128 (288)
185 3gxj_A TGF-beta receptor type- 99.4 3.4E-14 1.2E-18 139.2 5.0 83 394-484 2-117 (303)
186 2eva_A TAK1 kinase - TAB1 chim 99.4 2.1E-14 7.3E-19 141.1 3.5 82 393-484 6-119 (307)
187 3tt0_A Basic fibroblast growth 99.4 3.9E-14 1.3E-18 143.8 5.5 88 392-484 66-208 (382)
188 3sb4_A Hypothetical leucine ri 99.4 2.6E-13 9E-18 134.7 11.3 220 56-308 48-328 (329)
189 3kex_A Receptor tyrosine-prote 99.4 4.4E-14 1.5E-18 140.0 5.5 81 393-484 11-132 (325)
190 3pls_A Macrophage-stimulating 99.4 4.9E-14 1.7E-18 137.7 5.4 80 396-484 22-141 (298)
191 2ozo_A Tyrosine-protein kinase 99.4 9.4E-14 3.2E-18 149.4 7.8 72 402-484 343-453 (613)
192 2h8h_A Proto-oncogene tyrosine 99.4 2E-14 6.8E-19 152.4 2.3 83 392-484 264-380 (535)
193 3og7_A AKAP9-BRAF fusion prote 99.4 3.4E-14 1.2E-18 138.3 3.3 82 392-484 21-137 (289)
194 3lxp_A Non-receptor tyrosine-p 99.4 9.4E-14 3.2E-18 137.2 6.0 78 397-484 33-151 (318)
195 3mdy_A Bone morphogenetic prot 99.4 2.3E-13 7.9E-18 135.4 8.7 85 392-484 34-151 (337)
196 3qup_A Tyrosine-protein kinase 99.4 7E-14 2.4E-18 138.4 4.8 93 392-484 20-154 (323)
197 3op5_A Serine/threonine-protei 99.4 1E-13 3.5E-18 139.7 5.9 86 392-484 32-169 (364)
198 3dtc_A Mitogen-activated prote 99.4 5.3E-14 1.8E-18 135.5 3.6 80 393-484 5-122 (271)
199 4fdw_A Leucine rich hypothetic 99.4 7.1E-12 2.4E-16 127.3 19.3 241 55-315 111-359 (401)
200 3vhe_A Vascular endothelial gr 99.4 8.6E-14 2.9E-18 139.9 5.0 36 508-543 321-356 (359)
201 4e5w_A Tyrosine-protein kinase 99.4 9.6E-14 3.3E-18 135.9 5.0 83 394-484 20-143 (302)
202 2w1i_A JAK2; chromosomal rearr 99.4 9.6E-14 3.3E-18 137.7 5.0 84 393-484 39-162 (326)
203 2r9u_A Variable lymphocyte rec 99.4 8.1E-13 2.8E-17 118.1 10.4 105 83-191 14-119 (174)
204 4fl3_A Tyrosine-protein kinase 99.4 1.5E-13 5E-18 148.3 6.3 72 401-484 375-486 (635)
205 2i1m_A Macrophage colony-stimu 99.4 1E-13 3.5E-18 137.9 4.7 88 392-484 43-181 (333)
206 1qpc_A LCK kinase; alpha beta 99.4 7.4E-14 2.5E-18 135.1 3.6 82 393-484 11-126 (279)
207 3lxl_A Tyrosine-protein kinase 99.4 8.8E-14 3E-18 138.0 4.2 85 392-484 20-144 (327)
208 2pvf_A Fibroblast growth facto 99.4 1.3E-13 4.5E-18 137.1 5.3 88 392-484 32-174 (334)
209 3q4u_A Activin receptor type-1 99.4 3.3E-13 1.1E-17 132.0 8.0 85 392-484 5-122 (301)
210 1byg_A CSK, protein (C-termina 99.4 6.1E-14 2.1E-18 135.7 2.6 85 392-484 18-134 (278)
211 2ivs_A Proto-oncogene tyrosine 99.4 1.7E-13 6E-18 134.8 5.8 88 392-484 20-167 (314)
212 1rjb_A FL cytokine receptor; k 99.4 1.7E-13 6E-18 136.8 5.9 88 392-484 42-189 (344)
213 4hgt_A Casein kinase I isoform 99.4 5.2E-13 1.8E-17 130.2 9.0 83 392-484 6-122 (296)
214 3cc6_A Protein tyrosine kinase 99.4 1.7E-13 5.8E-18 132.8 5.4 82 392-484 9-130 (281)
215 1xbb_A Tyrosine-protein kinase 99.4 1.7E-13 5.7E-18 133.6 5.4 79 394-484 15-134 (291)
216 3lzb_A Epidermal growth factor 99.4 2.4E-13 8.2E-18 134.8 6.4 81 393-484 13-134 (327)
217 1csn_A Casein kinase-1; phosph 99.4 1.6E-13 5.5E-18 134.0 5.1 81 393-484 8-123 (298)
218 2y4i_B KSR2, HKSR2, kinase sup 99.4 1.6E-13 5.4E-18 135.5 4.9 83 392-484 30-147 (319)
219 1fvr_A Tyrosine-protein kinase 99.4 3E-13 1E-17 134.2 6.6 88 392-484 22-159 (327)
220 2yfx_A Tyrosine-protein kinase 99.4 1.9E-13 6.6E-18 135.5 5.0 88 392-484 27-157 (327)
221 1u59_A Tyrosine-protein kinase 99.4 3.2E-13 1.1E-17 131.3 6.4 80 394-484 8-127 (287)
222 2j0j_A Focal adhesion kinase 1 99.4 2.4E-13 8.1E-18 147.3 5.7 81 393-484 388-508 (656)
223 4fdw_A Leucine rich hypothetic 99.4 2.6E-11 8.8E-16 123.2 20.1 216 80-311 112-333 (401)
224 3sv0_A Casein kinase I-like; t 99.4 3.8E-13 1.3E-17 140.1 6.7 82 392-484 4-120 (483)
225 4fvq_A Tyrosine-protein kinase 99.4 7.1E-14 2.4E-18 136.0 1.1 82 393-484 6-130 (289)
226 3uzp_A CKI-delta, CKID, casein 99.4 4.6E-13 1.6E-17 130.6 6.8 83 392-484 6-122 (296)
227 1t46_A HOMO sapiens V-KIT hard 99.4 2.4E-13 8.2E-18 133.8 4.8 88 392-484 20-162 (313)
228 2wqm_A Serine/threonine-protei 99.4 3.2E-13 1.1E-17 132.8 4.9 86 392-484 29-153 (310)
229 1p4o_A Insulin-like growth fac 99.4 2E-13 6.8E-18 135.0 3.2 88 392-484 22-155 (322)
230 1b6c_B TGF-B superfamily recep 99.3 6E-13 2.1E-17 132.7 6.7 84 393-484 40-156 (342)
231 1tki_A Titin; serine kinase, m 99.3 9.4E-13 3.2E-17 130.2 7.7 82 393-484 3-119 (321)
232 3tki_A Serine/threonine-protei 99.3 7.7E-13 2.6E-17 130.9 7.1 80 394-484 6-122 (323)
233 3p1a_A MYT1 kinase, membrane-a 99.3 5.5E-13 1.9E-17 131.2 5.8 79 395-484 57-174 (311)
234 3uqc_A Probable conserved tran 99.3 1.6E-12 5.5E-17 126.2 9.0 138 393-544 29-267 (286)
235 3fxz_A Serine/threonine-protei 99.3 5.2E-13 1.8E-17 130.5 5.6 81 392-484 17-133 (297)
236 2ifg_A High affinity nerve gro 99.3 1.9E-12 6.4E-17 129.5 9.3 108 31-143 8-116 (347)
237 3un9_A NLR family member X1; l 99.3 5.8E-14 2E-18 141.3 -1.8 110 57-167 72-196 (372)
238 2xir_A Vascular endothelial gr 99.3 4.5E-13 1.5E-17 132.0 4.5 89 392-484 24-165 (316)
239 3fdn_A Serine/threonine-protei 99.3 3.9E-13 1.3E-17 130.0 3.9 82 392-484 6-126 (279)
240 2buj_A Serine/threonine-protei 99.3 4.9E-13 1.7E-17 131.9 4.5 89 393-484 27-151 (317)
241 2izr_A Casein kinase I isoform 99.3 1.2E-12 4.1E-17 129.9 7.3 81 393-484 7-122 (330)
242 1x8b_A WEE1HU, WEE1-like prote 99.3 4E-13 1.4E-17 130.3 3.7 86 392-484 8-132 (289)
243 3uto_A Twitchin; kinase, muscl 99.3 5.2E-13 1.8E-17 141.9 4.9 82 393-484 155-272 (573)
244 4eqm_A Protein kinase; transfe 99.3 6.6E-13 2.3E-17 129.6 5.1 81 393-484 9-128 (294)
245 2a19_B Interferon-induced, dou 99.3 1.1E-12 3.7E-17 127.1 6.2 87 394-484 10-139 (284)
246 4f0f_A Serine/threonine-protei 99.3 2.4E-12 8.1E-17 125.0 8.4 81 392-484 16-139 (287)
247 3zgw_A Maternal embryonic leuc 99.3 6E-13 2E-17 132.8 4.2 82 392-484 7-125 (347)
248 3fe3_A MAP/microtubule affinit 99.3 7.1E-13 2.4E-17 131.4 4.4 82 392-484 12-131 (328)
249 3cok_A Serine/threonine-protei 99.3 1.7E-12 6E-17 125.3 6.6 83 392-484 8-129 (278)
250 3qd2_B Eukaryotic translation 99.3 1.3E-12 4.4E-17 129.6 5.8 47 435-484 135-181 (332)
251 3un9_A NLR family member X1; l 99.3 4.8E-14 1.6E-18 142.0 -4.7 72 224-297 184-259 (372)
252 2w4o_A Calcium/calmodulin-depe 99.3 1.4E-12 4.7E-17 130.6 5.6 82 392-484 50-165 (349)
253 3v5w_A G-protein coupled recep 99.3 1E-12 3.5E-17 139.5 4.3 82 392-484 186-309 (689)
254 2h6d_A 5'-AMP-activated protei 99.3 1.4E-12 4.8E-17 125.8 4.7 81 393-484 9-128 (276)
255 2h34_A Serine/threonine-protei 99.3 9E-13 3.1E-17 129.6 3.4 82 392-484 31-151 (309)
256 3f3z_A Calcium/calmodulin-depe 99.3 1.3E-12 4.5E-17 126.1 4.5 81 393-484 7-123 (277)
257 2c30_A Serine/threonine-protei 99.3 1.9E-12 6.7E-17 127.9 5.8 77 396-484 46-158 (321)
258 4eut_A Serine/threonine-protei 99.3 4.7E-12 1.6E-16 129.0 8.5 86 393-484 7-129 (396)
259 3is5_A Calcium-dependent prote 99.3 8E-13 2.7E-17 128.3 2.3 85 393-484 20-141 (285)
260 2y0a_A Death-associated protei 99.3 1.9E-12 6.6E-17 128.2 5.1 81 393-484 9-131 (326)
261 2y94_A 5'-AMP-activated protei 99.3 3E-12 1E-16 133.1 6.6 81 393-484 14-133 (476)
262 3uc3_A Serine/threonine-protei 99.3 2.1E-12 7E-17 129.9 5.3 82 392-484 17-133 (361)
263 1u46_A ACK-1, activated CDC42 99.3 1.3E-12 4.3E-17 127.1 3.6 82 392-484 15-138 (291)
264 3h4j_B AMPK kdaid, SNF1-like p 99.3 2E-12 6.7E-17 128.5 5.0 80 393-484 7-125 (336)
265 2v62_A Serine/threonine-protei 99.3 1.3E-12 4.6E-17 130.5 3.8 84 393-484 35-168 (345)
266 4euu_A Serine/threonine-protei 99.3 6.7E-12 2.3E-16 123.9 8.7 86 393-484 7-129 (319)
267 2clq_A Mitogen-activated prote 99.3 2.7E-12 9.3E-17 125.0 5.6 83 394-484 21-139 (295)
268 2yab_A Death-associated protei 99.3 3.8E-12 1.3E-16 127.8 6.7 82 392-484 9-132 (361)
269 1kob_A Twitchin; kinase, intra 99.3 2.2E-12 7.6E-17 130.7 5.0 83 392-484 48-166 (387)
270 3m2w_A MAP kinase-activated pr 99.3 4.4E-12 1.5E-16 123.9 7.0 87 393-484 15-134 (299)
271 3a7i_A MST3 kinase, serine/thr 99.3 1.4E-12 4.8E-17 127.7 3.3 81 392-484 19-136 (303)
272 3i6u_A CDS1, serine/threonine- 99.3 5.4E-12 1.8E-16 129.5 7.8 81 392-484 132-256 (419)
273 2w5a_A Serine/threonine-protei 99.3 1.1E-12 3.6E-17 126.9 2.2 86 394-484 5-128 (279)
274 2yex_A Serine/threonine-protei 99.3 4.7E-12 1.6E-16 122.1 6.7 79 395-484 7-122 (276)
275 3kn6_A Ribosomal protein S6 ki 99.3 2.8E-12 9.7E-17 127.0 5.2 74 400-484 16-123 (325)
276 2rku_A Serine/threonine-protei 99.3 1.3E-12 4.4E-17 127.4 2.5 81 393-484 13-132 (294)
277 3fhr_A MAP kinase-activated pr 99.2 4.3E-12 1.5E-16 126.3 6.3 88 392-484 25-145 (336)
278 3kk8_A Calcium/calmodulin depe 99.2 2.2E-12 7.5E-17 125.0 4.1 81 393-484 4-122 (284)
279 4b99_A Mitogen-activated prote 99.2 6.5E-12 2.2E-16 127.2 7.4 86 392-484 51-175 (398)
280 2eue_A Carbon catabolite derep 99.2 3E-12 1E-16 123.5 4.7 80 393-484 11-129 (275)
281 3lm5_A Serine/threonine-protei 99.2 3.5E-12 1.2E-16 126.4 5.1 75 401-484 35-148 (327)
282 2qr7_A Ribosomal protein S6 ki 99.2 3E-12 1E-16 127.6 4.7 82 392-484 19-133 (342)
283 3dls_A PAS domain-containing s 99.2 7.4E-12 2.5E-16 124.5 7.5 82 392-484 21-147 (335)
284 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.3E-16 123.4 8.9 104 61-168 12-117 (347)
285 2x4f_A Myosin light chain kina 99.2 2.8E-12 9.7E-17 129.4 4.1 78 397-484 91-204 (373)
286 3gni_B Strad alpha; kinase fol 99.2 7.6E-12 2.6E-16 127.2 7.2 84 392-484 22-145 (389)
287 2jii_A Serine/threonine-protei 99.2 4.1E-12 1.4E-16 127.3 5.1 82 394-484 41-176 (352)
288 2vgo_A Serine/threonine-protei 99.2 2.9E-12 1E-16 124.2 3.9 81 393-484 12-131 (284)
289 1o6l_A RAC-beta serine/threoni 99.2 4.2E-12 1.4E-16 126.3 5.0 80 394-484 4-122 (337)
290 2j7t_A Serine/threonine-protei 99.2 3.7E-12 1.3E-16 124.6 4.6 83 392-484 16-134 (302)
291 3soa_A Calcium/calmodulin-depe 99.2 4.1E-12 1.4E-16 131.1 5.1 81 393-484 9-127 (444)
292 2owb_A Serine/threonine-protei 99.2 1.7E-12 5.8E-17 129.2 2.0 82 392-484 38-158 (335)
293 3c0i_A Peripheral plasma membr 99.2 5.9E-12 2E-16 126.1 5.8 85 393-484 22-147 (351)
294 2bdw_A Hypothetical protein K1 99.2 3.4E-12 1.2E-16 128.4 4.0 81 393-484 27-145 (362)
295 2a2a_A Death-associated protei 99.2 5.6E-12 1.9E-16 124.5 5.5 81 393-484 10-132 (321)
296 3bhy_A Death-associated protei 99.2 3.2E-12 1.1E-16 123.7 3.5 79 395-484 5-125 (283)
297 1xjd_A Protein kinase C, theta 99.2 1.8E-12 6.3E-17 129.2 1.6 81 393-484 15-135 (345)
298 4agu_A Cyclin-dependent kinase 99.2 9.2E-12 3.1E-16 122.3 6.6 79 395-484 3-119 (311)
299 4dc2_A Protein kinase C IOTA t 99.2 6.6E-12 2.3E-16 127.4 5.6 82 392-484 49-170 (396)
300 2vwi_A Serine/threonine-protei 99.2 1.2E-11 4.3E-16 120.8 7.3 88 392-484 12-138 (303)
301 3txo_A PKC-L, NPKC-ETA, protei 99.2 3.8E-12 1.3E-16 127.4 3.3 81 393-484 21-141 (353)
302 3eqc_A Dual specificity mitoge 99.2 1.2E-11 4E-16 124.4 6.7 82 392-484 30-148 (360)
303 1vzo_A Ribosomal protein S6 ki 99.2 4.9E-12 1.7E-16 126.9 3.9 81 393-484 52-176 (355)
304 1rdq_E PKA C-alpha, CAMP-depen 99.2 6.6E-12 2.3E-16 125.5 4.6 82 392-484 38-158 (350)
305 3com_A Serine/threonine-protei 99.2 6.3E-12 2.2E-16 123.7 4.3 83 392-484 26-142 (314)
306 3g33_A Cell division protein k 99.2 1.9E-11 6.5E-16 119.9 7.6 88 392-484 6-137 (308)
307 4ejn_A RAC-alpha serine/threon 99.2 6.5E-12 2.2E-16 130.1 4.5 82 392-484 145-265 (446)
308 1t4h_A Serine/threonine-protei 99.2 9.1E-12 3.1E-16 121.1 5.2 82 396-484 27-146 (290)
309 3niz_A Rhodanese family protei 99.2 9.9E-12 3.4E-16 122.2 5.5 82 392-484 18-136 (311)
310 2pml_X PFPK7, Ser/Thr protein 99.2 1.6E-11 5.5E-16 122.7 7.1 83 393-484 29-168 (348)
311 2ac3_A MAP kinase-interacting 99.2 3.5E-11 1.2E-15 118.5 9.4 79 395-484 12-128 (316)
312 4fr4_A YANK1, serine/threonine 99.2 5.9E-12 2E-16 127.2 4.0 81 393-484 13-132 (384)
313 2zv2_A Calcium/calmodulin-depe 99.2 1.3E-11 4.5E-16 120.5 6.3 82 393-484 11-154 (298)
314 2wtk_C Serine/threonine-protei 99.2 1.2E-11 3.9E-16 121.2 5.8 83 394-484 4-126 (305)
315 4f9c_A Cell division cycle 7-r 99.2 1.9E-11 6.4E-16 122.3 7.4 79 392-484 18-134 (361)
316 3hko_A Calcium/calmodulin-depe 99.2 7.1E-12 2.4E-16 125.1 4.3 88 392-484 23-185 (345)
317 1ob3_A PFPK5, cell division co 99.2 2.1E-11 7.2E-16 118.4 7.4 79 395-484 2-117 (288)
318 1nxk_A MAP kinase-activated pr 99.2 8E-12 2.7E-16 127.4 4.5 87 393-484 59-178 (400)
319 2i0e_A Protein kinase C-beta I 99.2 6.9E-12 2.4E-16 125.5 3.8 81 393-484 18-138 (353)
320 3ork_A Serine/threonine protei 99.2 6.1E-12 2.1E-16 123.7 3.3 86 392-484 9-133 (311)
321 3fme_A Dual specificity mitoge 99.2 4.1E-12 1.4E-16 123.4 2.1 84 393-484 5-126 (290)
322 3q5i_A Protein kinase; CDPK, m 99.2 2E-11 6.9E-16 128.4 7.5 82 392-484 33-163 (504)
323 1phk_A Phosphorylase kinase; g 99.2 8.4E-12 2.9E-16 121.8 4.2 81 393-484 15-141 (298)
324 3lij_A Calcium/calmodulin depe 99.2 9.6E-12 3.3E-16 130.5 4.8 81 393-484 35-153 (494)
325 2r5t_A Serine/threonine-protei 99.2 5.8E-12 2E-16 126.9 3.0 82 392-484 35-156 (373)
326 2ycf_A Serine/threonine-protei 99.2 1.3E-11 4.5E-16 121.9 5.4 80 393-484 8-131 (322)
327 3an0_A Dual specificity mitoge 99.2 8.1E-12 2.8E-16 124.4 3.9 85 392-484 48-170 (340)
328 1u5q_A Serine/threonine protei 99.2 4.7E-12 1.6E-16 126.5 2.1 82 392-484 51-171 (348)
329 3a8x_A Protein kinase C IOTA t 99.2 1E-11 3.5E-16 123.9 4.3 81 393-484 7-127 (345)
330 2jam_A Calcium/calmodulin-depe 99.2 1E-11 3.4E-16 121.7 4.2 81 393-484 7-123 (304)
331 4aaa_A Cyclin-dependent kinase 99.2 1.4E-11 4.7E-16 122.3 5.1 82 392-484 22-141 (331)
332 1fot_A TPK1 delta, CAMP-depend 99.2 1.4E-11 4.9E-16 121.4 5.1 80 394-484 5-123 (318)
333 3ll6_A Cyclin G-associated kin 99.2 1.3E-11 4.4E-16 122.6 4.7 88 393-484 26-153 (337)
334 2pmi_A Negative RE, cyclin-dep 99.2 2.2E-11 7.5E-16 120.1 6.1 85 394-484 4-125 (317)
335 3dbq_A Dual specificity protei 99.2 1.2E-11 4.2E-16 123.3 4.4 80 393-484 7-125 (343)
336 2r3i_A Cell division protein k 99.2 1.8E-11 6.2E-16 119.4 5.4 80 395-484 3-120 (299)
337 2y7j_A Phosphorylase B kinase 99.2 3E-11 1E-15 121.6 7.1 81 393-484 92-217 (365)
338 3e7e_A HBUB1, BUB1A, mitotic c 99.2 4.8E-11 1.6E-15 120.1 8.5 87 392-484 62-189 (365)
339 2acx_A G protein-coupled recep 99.2 1.2E-11 4.1E-16 130.6 4.1 84 392-484 181-303 (576)
340 2wei_A Calmodulin-domain prote 99.1 1.3E-11 4.5E-16 119.8 4.0 80 394-484 21-138 (287)
341 1zy4_A Serine/threonine-protei 99.1 1.5E-11 5E-16 120.1 4.1 86 394-484 5-133 (303)
342 3a99_A Proto-oncogene serine/t 99.1 1.8E-11 6.1E-16 120.9 4.6 82 392-484 40-166 (320)
343 3pfq_A PKC-B, PKC-beta, protei 99.1 1.7E-11 5.8E-16 133.2 4.8 81 393-484 339-459 (674)
344 3mwu_A Calmodulin-domain prote 99.1 2.2E-11 7.5E-16 127.5 5.4 81 393-484 20-138 (486)
345 3gbz_A Kinase, CMGC CDK; ssgci 99.1 3.7E-11 1.3E-15 119.1 6.4 81 392-484 31-149 (329)
346 2iwi_A Serine/threonine-protei 99.1 1.5E-11 5.1E-16 120.9 3.6 82 392-484 28-156 (312)
347 3a62_A Ribosomal protein S6 ki 99.1 1.5E-11 5.3E-16 121.7 3.6 82 392-484 14-138 (327)
348 3mtl_A Cell division protein k 99.1 1.5E-11 5.1E-16 121.7 3.5 79 395-484 2-117 (324)
349 2zmd_A Dual specificity protei 99.1 1.9E-11 6.5E-16 124.1 4.2 79 394-484 55-172 (390)
350 3o0g_A Cell division protein k 99.1 4.2E-11 1.4E-15 116.5 6.4 79 395-484 2-118 (292)
351 3nyv_A Calmodulin-domain prote 99.1 2.1E-11 7.1E-16 127.7 4.4 81 393-484 24-143 (484)
352 1blx_A Cyclin-dependent kinase 99.1 6.1E-11 2.1E-15 117.2 7.3 88 392-484 8-137 (326)
353 3llt_A Serine/threonine kinase 99.1 4.2E-11 1.4E-15 120.2 6.1 83 392-484 32-154 (360)
354 3pg1_A Mitogen-activated prote 99.1 3.4E-11 1.2E-15 121.0 5.3 87 392-484 19-151 (362)
355 4aw2_A Serine/threonine-protei 99.1 1.8E-11 6E-16 125.9 3.2 83 392-484 71-192 (437)
356 3kvw_A DYRK2, dual specificity 99.1 3.8E-11 1.3E-15 123.5 5.0 83 392-484 94-217 (429)
357 2x7f_A TRAF2 and NCK-interacti 99.1 2.1E-11 7.3E-16 120.5 2.7 89 392-484 21-146 (326)
358 3cek_A Dual specificity protei 99.1 3.6E-11 1.2E-15 118.2 4.1 81 392-484 25-144 (313)
359 3v8s_A RHO-associated protein 99.1 2E-11 6.8E-16 124.5 2.2 81 392-484 66-185 (410)
360 3c4z_A Rhodopsin kinase; Ser/T 99.1 4.3E-11 1.5E-15 125.9 4.6 86 392-484 182-306 (543)
361 1z57_A Dual specificity protei 99.1 8.9E-11 3E-15 116.5 6.6 82 393-484 12-135 (339)
362 3byv_A Rhoptry kinase; malaria 99.1 3.3E-11 1.1E-15 121.9 3.2 48 436-484 175-223 (377)
363 2vd5_A DMPK protein; serine/th 99.1 3.5E-11 1.2E-15 122.7 3.4 83 392-484 58-179 (412)
364 3aln_A Dual specificity mitoge 99.1 1.2E-10 4.2E-15 115.2 6.4 85 393-484 20-142 (327)
365 3nsz_A CK II alpha, casein kin 99.1 1.4E-10 4.9E-15 114.8 6.9 81 392-484 33-147 (330)
366 2vx3_A Dual specificity tyrosi 99.1 1.1E-10 3.6E-15 118.4 5.9 83 392-484 51-174 (382)
367 1ua2_A CAK, cell division prot 99.1 1.6E-10 5.3E-15 115.4 6.9 81 393-484 8-129 (346)
368 4fs7_A Uncharacterized protein 99.0 5.3E-09 1.8E-13 106.2 17.4 245 48-311 61-353 (394)
369 3q60_A ROP5B; pseudokinase, tr 99.0 8.9E-11 3.1E-15 118.4 4.0 45 434-484 161-211 (371)
370 2pzi_A Probable serine/threoni 99.0 6E-10 2.1E-14 121.5 10.8 84 393-484 78-199 (681)
371 3eb0_A Putative uncharacterize 99.0 1.2E-10 4.1E-15 118.0 4.5 90 392-484 4-158 (383)
372 2i6l_A Mitogen-activated prote 99.0 1.7E-10 5.7E-15 113.6 4.9 85 392-484 8-137 (320)
373 2eu9_A Dual specificity protei 99.0 2.9E-10 9.8E-15 113.6 6.6 82 393-484 17-140 (355)
374 2dyl_A Dual specificity mitoge 99.0 1E-10 3.5E-15 115.1 3.2 82 392-484 22-141 (318)
375 3qyz_A Mitogen-activated prote 99.0 3.5E-10 1.2E-14 113.7 7.0 85 392-484 24-145 (364)
376 2b9h_A MAP kinase FUS3, mitoge 99.0 2.7E-10 9.3E-15 113.9 5.5 85 392-484 8-129 (353)
377 4exu_A Mitogen-activated prote 99.0 2.1E-10 7.2E-15 115.6 3.8 85 391-484 38-161 (371)
378 2xrw_A Mitogen-activated prote 99.0 9E-10 3.1E-14 111.0 8.5 83 393-484 23-144 (371)
379 1cm8_A Phosphorylated MAP kina 99.0 2.5E-10 8.6E-15 114.9 4.4 85 392-484 22-145 (367)
380 1q8y_A SR protein kinase; tran 99.0 3.6E-10 1.2E-14 113.8 5.4 85 394-484 18-148 (373)
381 2ra8_A Uncharacterized protein 99.0 3.1E-10 1.1E-14 113.2 4.6 86 223-312 252-341 (362)
382 3mi9_A Cell division protein k 99.0 1.4E-09 4.7E-14 108.7 9.3 86 393-484 15-141 (351)
383 3qa8_A MGC80376 protein; kinas 98.9 4.2E-10 1.4E-14 120.2 5.5 89 393-484 12-138 (676)
384 3coi_A Mitogen-activated prote 98.9 5.3E-10 1.8E-14 111.9 5.9 84 392-484 21-143 (353)
385 3rp9_A Mitogen-activated prote 98.9 1.9E-09 6.4E-14 112.0 10.2 87 391-484 49-173 (458)
386 3p23_A Serine/threonine-protei 98.9 4.2E-10 1.4E-14 115.7 5.1 82 392-484 21-135 (432)
387 4e7w_A Glycogen synthase kinas 98.9 4.3E-10 1.5E-14 114.3 4.6 89 393-484 38-158 (394)
388 1wak_A Serine/threonine-protei 98.9 1.5E-09 5E-14 110.3 8.5 86 393-484 35-163 (397)
389 2fst_X Mitogen-activated prote 98.9 3.8E-10 1.3E-14 113.5 4.0 86 391-484 25-149 (367)
390 3ttj_A Mitogen-activated prote 98.9 1.4E-09 5E-14 112.8 8.0 84 392-484 59-181 (464)
391 3e3p_A Protein kinase, putativ 98.9 8E-10 2.7E-14 110.8 5.6 90 392-484 20-146 (360)
392 3oz6_A Mitogen-activated prote 98.9 3.7E-10 1.3E-14 114.6 3.0 81 393-484 7-126 (388)
393 3n9x_A Phosphotransferase; mal 98.9 3.8E-09 1.3E-13 108.6 10.0 86 392-484 23-146 (432)
394 2ra8_A Uncharacterized protein 98.9 7.3E-10 2.5E-14 110.5 4.1 85 50-138 132-227 (362)
395 3rgf_A Cyclin-dependent kinase 98.9 2.3E-09 7.8E-14 109.4 7.8 86 395-484 20-145 (405)
396 2rio_A Serine/threonine-protei 98.8 4E-09 1.4E-13 108.6 6.5 82 397-484 17-132 (434)
397 1j1b_A Glycogen synthase kinas 98.8 3.3E-09 1.1E-13 108.7 5.6 89 393-484 52-173 (420)
398 4gt6_A Cell surface protein; l 98.8 4.3E-07 1.5E-11 92.1 19.8 109 52-164 58-170 (394)
399 4fs7_A Uncharacterized protein 98.7 1.7E-07 5.7E-12 95.1 16.5 80 223-311 297-376 (394)
400 3rw6_A Nuclear RNA export fact 98.7 6.3E-10 2.2E-14 105.3 -2.7 104 77-183 137-257 (267)
401 4gt6_A Cell surface protein; l 98.7 7.9E-07 2.7E-11 90.1 19.2 248 51-314 81-370 (394)
402 1io0_A Tropomodulin; LRR prote 98.6 4.8E-09 1.7E-13 94.4 -0.4 115 51-166 30-163 (185)
403 3dzo_A Rhoptry kinase domain; 98.5 3.8E-08 1.3E-12 100.5 3.8 48 436-484 180-228 (413)
404 1io0_A Tropomodulin; LRR prote 98.5 3.1E-08 1E-12 89.1 1.1 89 224-314 66-164 (185)
405 4h09_A Hypothetical leucine ri 98.4 3.6E-05 1.2E-09 77.3 21.4 245 48-310 59-319 (379)
406 2vuw_A Serine/threonine-protei 98.4 3.9E-07 1.3E-11 90.2 6.6 45 433-484 134-178 (336)
407 3rw6_A Nuclear RNA export fact 98.3 3.1E-07 1.1E-11 86.8 3.6 107 53-161 137-258 (267)
408 3en9_A Glycoprotease, O-sialog 98.1 1.4E-06 4.9E-11 91.8 4.5 67 399-484 340-448 (540)
409 3e4g_A ATP synthase subunit S, 98.0 1.5E-06 5E-11 76.3 2.6 34 58-91 62-95 (176)
410 3e4g_A ATP synthase subunit S, 98.0 1.9E-06 6.6E-11 75.5 1.8 92 73-165 53-150 (176)
411 4h09_A Hypothetical leucine ri 97.9 0.00082 2.8E-08 67.2 20.1 261 52-332 87-362 (379)
412 1zar_A RIO2 kinase; serine kin 97.8 1.7E-05 5.9E-10 76.1 5.9 78 394-484 89-210 (282)
413 4azs_A Methyltransferase WBDD; 97.5 7.3E-05 2.5E-09 79.2 5.0 49 422-484 308-356 (569)
414 1pgv_A TMD-1, tropomodulin TMD 97.5 4.2E-05 1.4E-09 68.3 2.4 91 222-314 69-170 (197)
415 1pgv_A TMD-1, tropomodulin TMD 97.4 4.1E-05 1.4E-09 68.4 1.4 65 54-119 38-111 (197)
416 4gyi_A RIO2 kinase; protein ki 97.2 0.00017 5.7E-09 71.8 4.0 76 397-484 97-222 (397)
417 1zth_A RIO1 serine protein kin 96.8 0.00039 1.3E-08 65.6 2.0 44 436-484 143-187 (258)
418 3rfe_A Platelet glycoprotein I 96.7 0.0029 9.9E-08 52.6 6.3 56 253-314 12-68 (130)
419 3rfe_A Platelet glycoprotein I 96.1 0.0061 2.1E-07 50.6 4.9 34 132-165 33-66 (130)
420 3tm0_A Aminoglycoside 3'-phosp 91.5 0.24 8.2E-06 46.0 5.9 73 396-484 15-122 (263)
421 3dxp_A Putative acyl-COA dehyd 88.7 0.86 2.9E-05 44.5 7.5 42 435-484 115-156 (359)
422 1nd4_A Aminoglycoside 3'-phosp 85.7 1.5 5.3E-05 40.1 7.0 38 433-484 87-124 (264)
423 3d1u_A Putative fructosamine-3 59.2 13 0.00046 34.7 5.9 22 399-420 19-40 (288)
424 4gkh_A Aminoglycoside 3'-phosp 57.6 13 0.00045 34.0 5.5 48 422-484 86-133 (272)
425 3tdw_A Gentamicin resistance p 44.7 28 0.00097 32.7 5.6 43 434-484 86-128 (306)
426 3ovc_A Hygromycin-B 4-O-kinase 42.0 37 0.0013 32.8 6.1 68 400-484 46-144 (362)
427 3jr1_A Putative fructosamine-3 37.9 67 0.0023 30.3 7.0 60 400-484 41-134 (312)
428 2lz0_A Uncharacterized protein 37.4 34 0.0012 26.1 4.0 44 119-163 9-52 (100)
429 3r70_A Aminoglycoside phosphot 32.6 27 0.00093 33.0 3.4 42 435-484 101-142 (320)
430 2lz0_A Uncharacterized protein 32.3 95 0.0032 23.5 5.8 37 52-89 15-51 (100)
431 3sg8_A APH(2'')-ID; antibiotic 31.1 19 0.00067 33.7 2.0 42 435-484 90-131 (304)
432 3ox7_P MH027; urokinase-type p 29.0 19 0.00064 18.4 0.7 10 28-37 5-14 (23)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.9e-42 Score=339.25 Aligned_cols=296 Identities=28% Similarity=0.434 Sum_probs=264.1
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCCCCCCCC--CCcceeCCCCCceEeecCccccCCCCCCEEEccCCccee--cCCccc
Q 039925 2 TDHLALLAIKSLLHDRRGVTSSWSNSIDLCQ--WRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRG--EIPEKV 77 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~--~~p~~~ 77 (549)
+|++||++||+++.+|. .+++|+.+.+||. |.||.|+... ...+++.|+|++|.+++ .+|..|
T Consensus 6 ~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~------------~~~~l~~L~L~~~~l~~~~~~~~~l 72 (313)
T 1ogq_A 6 QDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDT------------QTYRVNNLDLSGLNLPKPYPIPSSL 72 (313)
T ss_dssp HHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSS------------SCCCEEEEEEECCCCSSCEECCGGG
T ss_pred HHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCC------------CCceEEEEECCCCCccCCcccChhH
Confidence 68899999999998876 8899988889998 9999997531 12367899999999998 899999
Q ss_pred cCCCCCCEeeccc-ccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCC
Q 039925 78 GRLFRLEYLLLAN-NHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSL 156 (549)
Q Consensus 78 ~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 156 (549)
.++++|++|+|++ |.+.+.+|..|..+++| ++|++++|.+++.+|..|.++++|++|++++|.+++.+|..+..+++|
T Consensus 73 ~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L-~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 151 (313)
T 1ogq_A 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQL-HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTC-SEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred hCCCCCCeeeCCCCCcccccCChhHhcCCCC-CEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC
Confidence 9999999999995 99999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CEEecccCcceecccccccccc--cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccc
Q 039925 157 FYDNINRNEFSGLIPSFIFNIS--LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQ 234 (549)
Q Consensus 157 ~~L~L~~n~l~~~~p~~~~~l~--L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~ 234 (549)
++|++++|++++.+|..+..+. |++|++++|.+++.+|..+. .+ .|+.|++++|.
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~-~l----------------------~L~~L~Ls~N~ 208 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA-NL----------------------NLAFVDLSRNM 208 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGG-GC----------------------CCSEEECCSSE
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHh-CC----------------------cccEEECcCCc
Confidence 9999999999999999999885 99999999999988888776 21 38899999999
Q ss_pred cccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccc
Q 039925 235 ISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 235 l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
+++..|..+..+ ++|+.|++++|.+++.+ ..+..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++
T Consensus 209 l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 209 LEGDASVLFGSD--KNTQKIHLAKNSLAFDL-----GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp EEECCGGGCCTT--SCCSEEECCSSEECCBG-----GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred ccCcCCHHHhcC--CCCCEEECCCCceeeec-----CcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 999999999999 99999999999998655 23788999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCCCc
Q 039925 315 ASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGGL 354 (549)
Q Consensus 315 ~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~~ 354 (549)
|.+|.. +. +..+.. +.+.+|+.+|+.+
T Consensus 282 ~~ip~~-------~~-----l~~L~~-l~l~~N~~lc~~p 308 (313)
T 1ogq_A 282 GEIPQG-------GN-----LQRFDV-SAYANNKCLCGSP 308 (313)
T ss_dssp EECCCS-------TT-----GGGSCG-GGTCSSSEEESTT
T ss_pred ccCCCC-------cc-----ccccCh-HHhcCCCCccCCC
Confidence 988863 01 223332 6789999999864
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-40 Score=367.91 Aligned_cols=304 Identities=22% Similarity=0.319 Sum_probs=215.7
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCcceeCCCCCceE----------ee---cC------------------
Q 039925 2 TDHLALLAIKSLLHDRRGVTSSWSNSIDLCQWRGVTCTHQHQRIN----------KC---LT------------------ 50 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~----------g~---lp------------------ 50 (549)
+|++|||+||+++.||. .+++|+.+.|||+|.||.|+. ++|+ |. +|
T Consensus 12 ~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~~--~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~ 88 (768)
T 3rgz_A 12 REIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCRD--DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSH 88 (768)
T ss_dssp HHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEET--TEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSC
T ss_pred HHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEECC--CcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCC
Confidence 58899999999999988 999999888999999999983 4555 54 44
Q ss_pred -----ccccCCCCCCEEEccCCcceecCCc--cccCCCCCCEeecccccccccCCccc-ccccCccceeeeccccccccc
Q 039925 51 -----PHVGNFGYLRFINLVDNNFRGEIPE--KVGRLFRLEYLLLANNHFSGKIPANL-SHCSNLLTKLFICETHLSGQL 122 (549)
Q Consensus 51 -----~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~~L~Ls~n~l~~~~ 122 (549)
+.|+++++|++|+|++|.+++.+|. .|+++++|++|+|++|.+.+.+|..+ .++++| ++|++++|.+++..
T Consensus 89 ~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~ 167 (768)
T 3rgz_A 89 INGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL-EVLDLSANSISGAN 167 (768)
T ss_dssp EEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC-SEEECCSSCCEEET
T ss_pred cCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC-CEEECCCCccCCcC
Confidence 4667778888888888888877777 78888888888888888877777655 677777 88888888777766
Q ss_pred ccc---cCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhh
Q 039925 123 LDF---IGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIG 198 (549)
Q Consensus 123 ~~~---~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~ 198 (549)
|.. +.++++|++|++++|.+++..| +..+++|++|++++|.+.+.+|. +..++ |++|++++|.+++.+|..+.
T Consensus 168 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~ 244 (768)
T 3rgz_A 168 VVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAIS 244 (768)
T ss_dssp HHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTT
T ss_pred ChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHh
Confidence 655 6667777777777777665443 25677777777777777766665 67777 77777777777766676666
Q ss_pred hcCCCCcEeeeccc----------ccccccc----------------cCcccccEEEccccccccccChhhhhccccCcc
Q 039925 199 VTLPKGRNYYILLL----------AQKLYWS----------------DVSTTATIIAMGGNQISGTITLGIKKLIFVNLY 252 (549)
Q Consensus 199 ~~l~~L~~L~l~~~----------~~~l~~l----------------~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~ 252 (549)
.+++|++|+++.+ +..++.+ ...++|++|++++|.+++.+|..+..+ ++|+
T Consensus 245 -~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~ 321 (768)
T 3rgz_A 245 -TCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC--SLLE 321 (768)
T ss_dssp -TCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC--TTCC
T ss_pred -cCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC--CCcc
Confidence 6777777777651 1111111 112567777777777777777777777 7777
Q ss_pred EEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCC-CCCEEEccCCcccccCC
Q 039925 253 ALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQ-NLMELSVSRNKLSASLP 318 (549)
Q Consensus 253 ~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p 318 (549)
.|++++|.+++.+| ...+..+++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|
T Consensus 322 ~L~L~~n~l~~~ip---~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~ 385 (768)
T 3rgz_A 322 SLALSSNNFSGELP---MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385 (768)
T ss_dssp EEECCSSEEEEECC---HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECC
T ss_pred EEECCCCcccCcCC---HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcC
Confidence 77777777776664 23366677777777777777666666666555 66666666666655444
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-39 Score=354.21 Aligned_cols=304 Identities=21% Similarity=0.267 Sum_probs=199.0
Q ss_pred hhHHHHHHHHhhcCCCC--------CCCCCCCCCCCCCCC---CcceeCCCCCceE----------eecCccccCCCCCC
Q 039925 2 TDHLALLAIKSLLHDRR--------GVTSSWSNSIDLCQW---RGVTCTHQHQRIN----------KCLTPHVGNFGYLR 60 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~--------~~~~~w~~~~~~c~w---~gv~c~~~~~~v~----------g~lp~~~~~l~~L~ 60 (549)
.|++||.+|++++.++. ....+|+.+.++|.| .||.|+.. ++|+ |.+|++|+++++|+
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~L~ 108 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTELE 108 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTTCC
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCccce
Confidence 48899999999986432 123489988999999 99999764 4555 89999999999999
Q ss_pred EEEccCC-------------------------------------------------------------------------
Q 039925 61 FINLVDN------------------------------------------------------------------------- 67 (549)
Q Consensus 61 ~L~L~~n------------------------------------------------------------------------- 67 (549)
+|+|++|
T Consensus 109 ~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l 188 (636)
T 4eco_A 109 VLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQI 188 (636)
T ss_dssp EEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTT
T ss_pred EEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhh
Confidence 9999988
Q ss_pred -----cceecCCccccCCCCCCEeeccccccccc-----------------CCcccc--cccCccceeeecccccccccc
Q 039925 68 -----NFRGEIPEKVGRLFRLEYLLLANNHFSGK-----------------IPANLS--HCSNLLTKLFICETHLSGQLL 123 (549)
Q Consensus 68 -----~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-----------------~p~~l~--~l~~L~~~L~Ls~n~l~~~~~ 123 (549)
++++ +|..|+++++|++|+|++|.+++. +|..++ ++++| ++|++++|.+.+.+|
T Consensus 189 ~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L-~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 189 GQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDL-TDVEVYNCPNLTKLP 266 (636)
T ss_dssp TCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC-CEEEEECCTTCSSCC
T ss_pred ccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCC-CEEEecCCcCCccCh
Confidence 4445 888999999999999999999975 999988 99999 999999999999999
Q ss_pred cccCCCCCCCEEEeecce-eee-eCCcc-------------------------------ccCCCCCCEEecccCcceecc
Q 039925 124 DFIGNPSAIQVMIFKENS-LEG-KFPNT-------------------------------LSNLRSLFYDNINRNEFSGLI 170 (549)
Q Consensus 124 ~~~~~l~~L~~L~L~~n~-l~~-~~p~~-------------------------------~~~l~~L~~L~L~~n~l~~~~ 170 (549)
..|+++++|++|++++|+ +++ .+|.. ++++++|++|++++|.+.+.+
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~i 346 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKL 346 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEEC
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccch
Confidence 999999999999998887 776 45544 444455555555555555444
Q ss_pred cccccccc-cceeeCCCCcCcccCchhhhhcCCC-CcEeeeccc-ccc------------cccc---------------c
Q 039925 171 PSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPK-GRNYYILLL-AQK------------LYWS---------------D 220 (549)
Q Consensus 171 p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~-L~~L~l~~~-~~~------------l~~l---------------~ 220 (549)
| .+..++ |++|++++|.++ .+|..+. .+++ |+.|+++++ +.. +..+ .
T Consensus 347 p-~~~~l~~L~~L~L~~N~l~-~lp~~l~-~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 347 P-AFGSEIKLASLNLAYNQIT-EIPANFC-GFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp C-CCEEEEEESEEECCSSEEE-ECCTTSE-EECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred h-hhCCCCCCCEEECCCCccc-cccHhhh-hhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 4 444444 555555555555 4555544 5555 666666651 111 1111 0
Q ss_pred -------CcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccc----cCCccccCeeeccCccc
Q 039925 221 -------VSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASS----LGNLTLLTYLALDNNKL 289 (549)
Q Consensus 221 -------~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~----l~~l~~L~~L~Ls~N~l 289 (549)
..++|+.|++++|.++...+..+..+ ++|+.|+|++|+++ .+|..+... +.++++|++|+|++|++
T Consensus 424 ~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l--~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTG--SPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp TTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTT--CCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred ccccccccCCCCCEEECcCCccCcCCHHHHccC--CCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcC
Confidence 11255666666666653322333345 66666666666666 443211000 11122555555555555
Q ss_pred cccCCcccc--CCCCCCEEEccCCcccc
Q 039925 290 QGNLPSSLG--YYQNLMELSVSRNKLSA 315 (549)
Q Consensus 290 ~~~~p~~l~--~l~~L~~L~Ls~N~l~~ 315 (549)
+ .+|..+. .+++|+.|+|++|++++
T Consensus 501 ~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 501 T-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp C-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred C-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 5 4454444 55555555555555554
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.4e-38 Score=350.09 Aligned_cols=331 Identities=20% Similarity=0.230 Sum_probs=221.6
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCCCC-----CC--CCC------------CcceeCCCCCceE----------eecCcc
Q 039925 2 TDHLALLAIKSLLHDRRGVTSSWSNSI-----DL--CQW------------RGVTCTHQHQRIN----------KCLTPH 52 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~----------g~lp~~ 52 (549)
+|++||++||+++.+| +|+.+. +| |.| .||.|+. ..+|+ |.+|+.
T Consensus 269 ~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 269 KDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECGG
T ss_pred HHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCchH
Confidence 5889999999999665 786544 55 999 9999985 24554 899999
Q ss_pred ccCCCCCCEEEc-cCCcceec-----------------------------------------------------------
Q 039925 53 VGNFGYLRFINL-VDNNFRGE----------------------------------------------------------- 72 (549)
Q Consensus 53 ~~~l~~L~~L~L-~~n~l~~~----------------------------------------------------------- 72 (549)
|+++++|++|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 76654333
Q ss_pred -----------------CCccccCCCCCCEeecccccccc-----------------cCCcccc--cccCccceeeeccc
Q 039925 73 -----------------IPEKVGRLFRLEYLLLANNHFSG-----------------KIPANLS--HCSNLLTKLFICET 116 (549)
Q Consensus 73 -----------------~p~~~~~l~~L~~L~Ls~n~l~~-----------------~~p~~l~--~l~~L~~~L~Ls~n 116 (549)
+|..|+++++|++|+|++|.+++ .+|..++ ++++| ++|+|++|
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L-~~L~Ls~N 501 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL-TDVELYNC 501 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC-CEEEEESC
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC-CEEECcCC
Confidence 78889999999999999999997 3888877 99999 99999999
Q ss_pred ccccccccccCCCCCCCEEEeecce-eee-eCCccccCCC-------CCCEEecccCcceecccc--cccccc-cceeeC
Q 039925 117 HLSGQLLDFIGNPSAIQVMIFKENS-LEG-KFPNTLSNLR-------SLFYDNINRNEFSGLIPS--FIFNIS-LKWNFL 184 (549)
Q Consensus 117 ~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~n~l~~~~p~--~~~~l~-L~~L~l 184 (549)
.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|.+. .+|. .+..++ |+.|++
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEEC
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEEC
Confidence 9988899888888888888888887 776 5565444333 6666666666666 5555 555555 666666
Q ss_pred CCCcCcccCchhhhhcCCCCcEeeecc------------------------c-cccccc-ccCc--ccccEEEccccccc
Q 039925 185 PENSFTGNLPLEIGVTLPKGRNYYILL------------------------L-AQKLYW-SDVS--TTATIIAMGGNQIS 236 (549)
Q Consensus 185 ~~n~l~~~~p~~~~~~l~~L~~L~l~~------------------------~-~~~l~~-l~~~--~~L~~L~l~~n~l~ 236 (549)
++|.++ .+| .+. .+++|+.|++++ + +..+.. +... ++|+.|++++|.+.
T Consensus 581 s~N~l~-~lp-~~~-~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~ 657 (876)
T 4ecn_A 581 VHNKVR-HLE-AFG-TNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIG 657 (876)
T ss_dssp TTSCCC-BCC-CCC-TTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred CCCCcc-cch-hhc-CCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCC
Confidence 666655 555 333 455555555544 1 111110 0111 23777777777776
Q ss_pred cccCh----------------------------hh-hhccccCccEEEcCCCcccccCCCcCcc----ccCCccccCeee
Q 039925 237 GTITL----------------------------GI-KKLIFVNLYALTMVKNKLSGPIPHHIAS----SLGNLTLLTYLA 283 (549)
Q Consensus 237 ~~~~~----------------------------~~-~~l~~~~L~~L~L~~n~l~~~~p~~l~~----~l~~l~~L~~L~ 283 (549)
+.+|. .+ ..+ ++|+.|+|++|+++ .+|..+.. .+.++++|++|+
T Consensus 658 g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l--~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~ 734 (876)
T 4ecn_A 658 SEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATG--SPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTID 734 (876)
T ss_dssp TTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTT--CCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEE
T ss_pred CccccchhhhccccCCCcCEEEccCCcCCccCHHHHccC--CCCCEEECCCCcCC-ccChHHhccccccccccCCccEEE
Confidence 54331 11 123 55666666666655 34321110 012234788888
Q ss_pred ccCccccccCCcccc--CCCCCCEEEccCCcccccCCCC----------CCCC------CC-CcccCCcc--ccccccee
Q 039925 284 LDNNKLQGNLPSSLG--YYQNLMELSVSRNKLSASLPPL----------NSQH------NH-SFSCPGFE--FSVIKLEF 342 (549)
Q Consensus 284 Ls~N~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~----------~ls~------N~-~~~ip~~~--~~~l~l~~ 342 (549)
|++|+++ .+|..+. .+++|+.|+|++|++++ +|.. ++++ |+ .+.+|..+ +..|.. +
T Consensus 735 Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~-L 811 (876)
T 4ecn_A 735 LRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQ-L 811 (876)
T ss_dssp CCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCE-E
T ss_pred CCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCE-E
Confidence 8888887 6777776 78888888888888876 5543 5544 44 45566555 333332 5
Q ss_pred eecCCCC
Q 039925 343 QIPGNKK 349 (549)
Q Consensus 343 ~~~gn~~ 349 (549)
++.+|..
T Consensus 812 ~Ls~N~L 818 (876)
T 4ecn_A 812 QIGSNDI 818 (876)
T ss_dssp ECCSSCC
T ss_pred ECCCCCC
Confidence 6666654
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.5e-37 Score=339.95 Aligned_cols=110 Identities=28% Similarity=0.450 Sum_probs=57.7
Q ss_pred CccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC---------
Q 039925 250 NLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL--------- 320 (549)
Q Consensus 250 ~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--------- 320 (549)
+|+.|+|++|+++|.+ |..++.+++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..
T Consensus 633 ~L~~LdLs~N~l~g~i----p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYI----PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp CCCEEECCSSCCBSCC----CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred cccEEECcCCcccccC----CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 3444444444444433 344455555555555555555555555555555555555555555555443
Q ss_pred -CCCCCC-CcccCCcc-cccccceeeecCCCCCCCCccccCcccCCCCCCC
Q 039925 321 -NSQHNH-SFSCPGFE-FSVIKLEFQIPGNKKLCGGLDELHLLSCHSKESK 368 (549)
Q Consensus 321 -~ls~N~-~~~ip~~~-~~~l~l~~~~~gn~~~c~~~~~~~~~~~~~~~~~ 368 (549)
|+++|+ .+.||... +..+.- ..+.|||.+||.+. .+|......
T Consensus 709 L~ls~N~l~g~iP~~~~~~~~~~-~~~~gN~~Lcg~~l----~~C~~~~~~ 754 (768)
T 3rgz_A 709 IDLSNNNLSGPIPEMGQFETFPP-AKFLNNPGLCGYPL----PRCDPSNAD 754 (768)
T ss_dssp EECCSSEEEEECCSSSSGGGSCG-GGGCSCTEEESTTS----CCCCSCC--
T ss_pred EECcCCcccccCCCchhhccCCH-HHhcCCchhcCCCC----cCCCCCccC
Confidence 555555 23445433 333322 56899999999752 378765433
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.7e-34 Score=298.34 Aligned_cols=125 Identities=18% Similarity=0.130 Sum_probs=109.2
Q ss_pred ccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCC
Q 039925 223 TTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQN 302 (549)
Q Consensus 223 ~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 302 (549)
++|+.|++++|.+.+..|..+..+ ++|+.|++++|.+++.. |..+..+++|++|+|++|++++..|..|..+++
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHF--TDLEQLTLAQNEINKID----DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTC--TTCCEEECTTSCCCEEC----TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred cCceEEEecCccccccchhhcccC--CCCCEEECCCCcccccC----hhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 479999999999999889999999 99999999999998655 567889999999999999999878889999999
Q ss_pred CCEEEccCCcccccCCCC----------CCCCCCCcccCCccccc---ccceeeecCCCCCCCCc
Q 039925 303 LMELSVSRNKLSASLPPL----------NSQHNHSFSCPGFEFSV---IKLEFQIPGNKKLCGGL 354 (549)
Q Consensus 303 L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~~~~~~---l~l~~~~~gn~~~c~~~ 354 (549)
|+.|+|++|++++..|.. ++++|++..+|...+.. +.. +.+.+|+..|..+
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~l~~~~~ 412 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK-IWLHTNPWDCSCP 412 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCBCCCTT
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE-EEccCCCcccCCC
Confidence 999999999999877754 89999999999876443 333 7899999988653
No 7
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=8.2e-35 Score=290.11 Aligned_cols=272 Identities=16% Similarity=0.149 Sum_probs=239.4
Q ss_pred hhHHHHHHHHhhcC-CCCCCCCCC----CCCCCCCCCCcceeCCCCCceEeecCccc--cCCCCCCEEEccCCcceecCC
Q 039925 2 TDHLALLAIKSLLH-DRRGVTSSW----SNSIDLCQWRGVTCTHQHQRINKCLTPHV--GNFGYLRFINLVDNNFRGEIP 74 (549)
Q Consensus 2 ~~~~~l~~~~~~~~-~~~~~~~~w----~~~~~~c~w~gv~c~~~~~~v~g~lp~~~--~~l~~L~~L~L~~n~l~~~~p 74 (549)
+|++||++||+++. ++.+.+.+| +...++|.|.|+.|+. ++..+ ...++++.|+|++|.++ .+|
T Consensus 27 ~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~--------~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 27 PYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKA--------TADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp CHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHH--------HHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred hHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhh--------hHHHHhcccccceeEEEccCCCch-hcC
Confidence 58899999999984 676667889 4566899999999952 12222 23578999999999999 899
Q ss_pred ccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccC--
Q 039925 75 EKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSN-- 152 (549)
Q Consensus 75 ~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-- 152 (549)
..+.++++|++|+|++|.++ .+|..+..+++| ++|+|++|.++ .+|..++++++|++|++++|++.+.+|..+..
T Consensus 98 ~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L-~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 98 DQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGL-ETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp SCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTC-SEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred hhhhhCCCCCEEECCCCCcc-chhHHHhccCCC-CEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 99999999999999999999 899999999999 99999999999 77889999999999999999988889987765
Q ss_pred -------CCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCccc
Q 039925 153 -------LRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTT 224 (549)
Q Consensus 153 -------l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~ 224 (549)
+++|++|++++|.++ .+|..+..++ |++|++++|.++ .+|..+. .+ ++
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~-~l---------------------~~ 230 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH-HL---------------------PK 230 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG-GC---------------------TT
T ss_pred chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc-cC---------------------CC
Confidence 999999999999998 7888899999 999999999999 5666655 33 36
Q ss_pred ccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCC
Q 039925 225 ATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLM 304 (549)
Q Consensus 225 L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 304 (549)
|+.|++++|.+.+.+|..+..+ ++|+.|+|++|.+.+.+ |..+..+++|++|+|++|++.+.+|..+..+++|+
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l--~~L~~L~L~~n~~~~~~----p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGR--APLKRLILKDCSNLLTL----PLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCC--CCCCEEECTTCTTCCBC----CTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred CCEEECcCCcchhhhHHHhcCC--CCCCEEECCCCCchhhc----chhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 8889999999999999999999 99999999999998877 56789999999999999999999999999999999
Q ss_pred EEEccCCcccc
Q 039925 305 ELSVSRNKLSA 315 (549)
Q Consensus 305 ~L~Ls~N~l~~ 315 (549)
.+++..|.+..
T Consensus 305 ~l~l~~~~~~~ 315 (328)
T 4fcg_A 305 IILVPPHLQAQ 315 (328)
T ss_dssp EEECCGGGSCC
T ss_pred EEeCCHHHHHH
Confidence 99999887663
No 8
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=287.70 Aligned_cols=309 Identities=18% Similarity=0.161 Sum_probs=248.4
Q ss_pred CCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCcccee
Q 039925 32 QWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKL 111 (549)
Q Consensus 32 ~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L 111 (549)
.|..|.|... +++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++| ++|
T Consensus 12 ~~~~v~c~~~--~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-~~L 85 (477)
T 2id5_A 12 QDRAVLCHRK--RFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL-RTL 85 (477)
T ss_dssp TTTEEECCSC--CCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEE
T ss_pred CCCEEEeCCC--CcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccC-CEE
Confidence 4678888653 333 5676553 589999999999997778899999999999999999997778899999999 999
Q ss_pred eecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCc
Q 039925 112 FICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 112 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
+|++|.++...+..|.++++|++|+|++|.+.+..|..|..+++|++|++++|.+.+..+..|..++ |++|++++|.++
T Consensus 86 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred ECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 9999999977777889999999999999999988888999999999999999999988888899998 999999999998
Q ss_pred ccCchhhhhcCCCCcEeeecc-cccccc--cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCC
Q 039925 191 GNLPLEIGVTLPKGRNYYILL-LAQKLY--WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPH 267 (549)
Q Consensus 191 ~~~p~~~~~~l~~L~~L~l~~-~~~~l~--~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~ 267 (549)
.++......+++|+.|++++ .+..+. .+...++|+.|++++|.+.+.++...... .+|+.|++++|.++ .+|
T Consensus 166 -~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~--~~L~~L~l~~n~l~-~~~- 240 (477)
T 2id5_A 166 -SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG--LNLTSLSITHCNLT-AVP- 240 (477)
T ss_dssp -SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT--CCCSEEEEESSCCC-SCC-
T ss_pred -ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccC--ccccEEECcCCccc-ccC-
Confidence 45544444899999999987 222221 23344588888888888777777766666 68888888888887 343
Q ss_pred cCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCCCcccCCccccc
Q 039925 268 HIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNHSFSCPGFEFSV 337 (549)
Q Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~~~~~~ 337 (549)
+..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|.. ++++|++..+|+..+..
T Consensus 241 --~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 318 (477)
T 2id5_A 241 --YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHS 318 (477)
T ss_dssp --HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSC
T ss_pred --HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCC
Confidence 356788888888888888888777777888888888888888888765544 78888888888876444
Q ss_pred c-cce-eeecCCCCCCCC
Q 039925 338 I-KLE-FQIPGNKKLCGG 353 (549)
Q Consensus 338 l-~l~-~~~~gn~~~c~~ 353 (549)
+ +++ +.+.+||+.|..
T Consensus 319 l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 319 VGNLETLILDSNPLACDC 336 (477)
T ss_dssp GGGCCEEECCSSCEECSG
T ss_pred CcccCEEEccCCCccCcc
Confidence 3 222 788999998863
No 9
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.98 E-value=1.6e-31 Score=286.00 Aligned_cols=147 Identities=16% Similarity=0.131 Sum_probs=88.8
Q ss_pred CCCCCcceeCCCCCceE---------------------eecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeec
Q 039925 30 LCQWRGVTCTHQHQRIN---------------------KCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLL 88 (549)
Q Consensus 30 ~c~w~gv~c~~~~~~v~---------------------g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 88 (549)
.|.|.|+ |+....+++ +..|..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4899988 875433333 233455666666666666666666555566666666666666
Q ss_pred ccccccccCCcccccccCccceeeecccccccc-cccccCCCCCCCEEEeecceeeeeC-CccccCCCCCCEEecccCcc
Q 039925 89 ANNHFSGKIPANLSHCSNLLTKLFICETHLSGQ-LLDFIGNPSAIQVMIFKENSLEGKF-PNTLSNLRSLFYDNINRNEF 166 (549)
Q Consensus 89 s~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l 166 (549)
++|++++..|..|..+++| ++|++++|.+++. .|..|+++++|++|++++|.+.+.+ +..|.++++|++|++++|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSL-KYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTC-CEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCC-cEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 6666665444446666666 6666666666542 4455666666666666666632233 34566666666666666666
Q ss_pred eecccccccccc
Q 039925 167 SGLIPSFIFNIS 178 (549)
Q Consensus 167 ~~~~p~~~~~l~ 178 (549)
.+..|..+..++
T Consensus 161 ~~~~~~~l~~l~ 172 (549)
T 2z81_A 161 RNYQSQSLKSIR 172 (549)
T ss_dssp CEECTTTTTTCS
T ss_pred cccChhhhhccc
Confidence 655555554433
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=3.1e-31 Score=287.14 Aligned_cols=127 Identities=20% Similarity=0.228 Sum_probs=104.3
Q ss_pred eecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccccc
Q 039925 47 KCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 47 g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++| ++|++++|.+++..+..|
T Consensus 46 ~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-~~L~L~~n~l~~~~~~~~ 124 (606)
T 3vq2_A 46 ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSL-ENLVAVETKLASLESFPI 124 (606)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTC-CEEECTTSCCCCSSSSCC
T ss_pred EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccC-CEEEccCCcccccccccc
Confidence 3344578888999999999998887778888889999999999999887778888888888 899999998887777788
Q ss_pred CCCCCCCEEEeecceeee-eCCccccCCCCCCEEecccCcceecccccc
Q 039925 127 GNPSAIQVMIFKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIPSFI 174 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 174 (549)
+++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..+..+
T Consensus 125 ~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 125 GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 888888888888888875 568888888888888888887776554433
No 11
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=1.2e-31 Score=274.19 Aligned_cols=317 Identities=14% Similarity=0.112 Sum_probs=199.8
Q ss_pred CCCCCCCCCCCCC-CCcceeCCCCCceE-----eecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccc
Q 039925 20 VTSSWSNSIDLCQ-WRGVTCTHQHQRIN-----KCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHF 93 (549)
Q Consensus 20 ~~~~w~~~~~~c~-w~gv~c~~~~~~v~-----g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l 93 (549)
.+++|.+..+||. |.+..|.....++. ......-..++++++|++++|.++...+..|..+++|++|+|++|.+
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i 81 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 81 (390)
T ss_dssp -----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred CcCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcc
Confidence 3568887778875 44444432222222 01111123457788888888887743334467788888888888888
Q ss_pred cccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceeccccc
Q 039925 94 SGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSF 173 (549)
Q Consensus 94 ~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 173 (549)
++..+..|..+++| ++|++++|.+++..|..|+++++|++|++++|.++...+..|.++++|++|++++|.+.+..+..
T Consensus 82 ~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 160 (390)
T 3o6n_A 82 EEIDTYAFAYAHTI-QKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 160 (390)
T ss_dssp CEECTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred cccChhhccCCCCc-CEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhh
Confidence 76556677788888 88888888887777777888888888888888887433344577888888888888887766777
Q ss_pred ccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc-ccc------cc------------cccCcccccEEEcccc
Q 039925 174 IFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL-AQK------LY------------WSDVSTTATIIAMGGN 233 (549)
Q Consensus 174 ~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~-~~~------l~------------~l~~~~~L~~L~l~~n 233 (549)
+..++ |++|++++|.+++ ++ +. .+++|+.|+++.+ +.. +. .....++|+.|++++|
T Consensus 161 ~~~l~~L~~L~l~~n~l~~-~~--~~-~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n 236 (390)
T 3o6n_A 161 FQATTSLQNLQLSSNRLTH-VD--LS-LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHN 236 (390)
T ss_dssp TSSCTTCCEEECCSSCCSB-CC--GG-GCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSS
T ss_pred ccCCCCCCEEECCCCcCCc-cc--cc-cccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCC
Confidence 77777 8888888888773 33 22 5666666666551 111 00 0112235666666666
Q ss_pred ccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcc
Q 039925 234 QISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKL 313 (549)
Q Consensus 234 ~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 313 (549)
.+++. ..+..+ ++|+.|++++|.+++.. |..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++
T Consensus 237 ~l~~~--~~l~~l--~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l 307 (390)
T 3o6n_A 237 NLTDT--AWLLNY--PGLVEVDLSYNELEKIM----YHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHL 307 (390)
T ss_dssp CCCCC--GGGGGC--TTCSEEECCSSCCCEEE----SGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCC
T ss_pred CCccc--HHHcCC--CCccEEECCCCcCCCcC----hhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcc
Confidence 66643 456666 77777777777776544 456677777777777777776 3455556677777777777777
Q ss_pred cccCCCC----------CCCCCCCcccCCcccccccceeeecCCCCCCC
Q 039925 314 SASLPPL----------NSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCG 352 (549)
Q Consensus 314 ~~~~p~~----------~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~ 352 (549)
++ +|.. ++++|++..+|...+..+.. +.+.+|++-|.
T Consensus 308 ~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~-L~l~~N~~~~~ 354 (390)
T 3o6n_A 308 LH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKN-LTLSHNDWDCN 354 (390)
T ss_dssp CC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSE-EECCSSCEEHH
T ss_pred ee-cCccccccCcCCEEECCCCccceeCchhhccCCE-EEcCCCCccch
Confidence 64 3322 67777777666554555543 67777777764
No 12
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=4.6e-32 Score=268.61 Aligned_cols=242 Identities=26% Similarity=0.418 Sum_probs=220.0
Q ss_pred CceEe--ecCccccCCCCCCEEEccC-CcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccc
Q 039925 43 QRINK--CLTPHVGNFGYLRFINLVD-NNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLS 119 (549)
Q Consensus 43 ~~v~g--~lp~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~ 119 (549)
.++.| .+|+.|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..+..+++| ++|++++|.++
T Consensus 60 ~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-~~L~Ls~N~l~ 138 (313)
T 1ogq_A 60 LNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL-VTLDFSYNALS 138 (313)
T ss_dssp CCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC-CEEECCSSEEE
T ss_pred CCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC-CEEeCCCCccC
Confidence 44556 8999999999999999995 99999999999999999999999999999999999999999 99999999999
Q ss_pred cccccccCCCCCCCEEEeecceeeeeCCccccCCC-CCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhh
Q 039925 120 GQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLR-SLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIG 198 (549)
Q Consensus 120 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~ 198 (549)
+.+|..|..+++|++|++++|.+++.+|..+..++ +|++|++++|.+.+.+|..+..++|++|++++|.+++..|..+.
T Consensus 139 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~ 218 (313)
T 1ogq_A 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFG 218 (313)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCC
T ss_pred CcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHh
Confidence 99999999999999999999999999999999998 99999999999999999999998899999999999977776654
Q ss_pred hcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccc
Q 039925 199 VTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTL 278 (549)
Q Consensus 199 ~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~ 278 (549)
.+ ++|+.|++++|.+++.+|. +..+ ++|++|+|++|.+++.+ |..+..+++
T Consensus 219 -~l---------------------~~L~~L~L~~N~l~~~~~~-~~~l--~~L~~L~Ls~N~l~~~~----p~~l~~l~~ 269 (313)
T 1ogq_A 219 -SD---------------------KNTQKIHLAKNSLAFDLGK-VGLS--KNLNGLDLRNNRIYGTL----PQGLTQLKF 269 (313)
T ss_dssp -TT---------------------SCCSEEECCSSEECCBGGG-CCCC--TTCCEEECCSSCCEECC----CGGGGGCTT
T ss_pred -cC---------------------CCCCEEECCCCceeeecCc-cccc--CCCCEEECcCCcccCcC----ChHHhcCcC
Confidence 33 3688889999999876665 7777 89999999999999876 578899999
Q ss_pred cCeeeccCccccccCCccccCCCCCCEEEccCCc-ccc
Q 039925 279 LTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNK-LSA 315 (549)
Q Consensus 279 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~ 315 (549)
|++|+|++|++++.+|.. ..+++|+.+++++|+ +.|
T Consensus 270 L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 270 LHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred CCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 999999999999888886 889999999999998 554
No 13
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.9e-31 Score=287.80 Aligned_cols=314 Identities=14% Similarity=0.111 Sum_probs=185.9
Q ss_pred CCCCCCCCCCCCCC----CCcceeCCCCCceE---eecC--ccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecc
Q 039925 19 GVTSSWSNSIDLCQ----WRGVTCTHQHQRIN---KCLT--PHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLA 89 (549)
Q Consensus 19 ~~~~~w~~~~~~c~----w~gv~c~~~~~~v~---g~lp--~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 89 (549)
..+++|.++.+||. |.++.|+. .+. ...+ ..-..+++++.|++++|.+....+..|..+++|++|+|+
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~---~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~ 83 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDV---HIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 83 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSC---EECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECT
T ss_pred ccccCCCCCCcCcccCcCceeEecCc---eecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECC
Confidence 36678988778774 65554431 111 0000 011234566666666666664333445666666666666
Q ss_pred cccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceec
Q 039925 90 NNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGL 169 (549)
Q Consensus 90 ~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 169 (549)
+|.+++..|..|..+++| ++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.+.+.
T Consensus 84 ~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 162 (597)
T 3oja_B 84 DLQIEEIDTYAFAYAHTI-QKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 162 (597)
T ss_dssp TSCCCEECTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCCCCCCChHHhcCCCCC-CEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCC
Confidence 666665555566666666 6666666666666666666666666666666666643333456666666666666666665
Q ss_pred ccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc--------------------ccccccccCcccccEE
Q 039925 170 IPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL--------------------AQKLYWSDVSTTATII 228 (549)
Q Consensus 170 ~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~--------------------~~~l~~l~~~~~L~~L 228 (549)
.|..|..++ |++|++++|.+++ ++ +. .+++|+.|+++.+ +..+. ....++|+.|
T Consensus 163 ~~~~~~~l~~L~~L~L~~N~l~~-~~--~~-~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~-~~~~~~L~~L 237 (597)
T 3oja_B 163 EDDTFQATTSLQNLQLSSNRLTH-VD--LS-LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVR-GPVNVELTIL 237 (597)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSB-CC--GG-GCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEE-CSCCSCCCEE
T ss_pred ChhhhhcCCcCcEEECcCCCCCC-cC--hh-hhhhhhhhhcccCccccccCCchhheeeccCCcccccc-cccCCCCCEE
Confidence 566666666 6666666666653 22 11 4455555555441 11111 1122456777
Q ss_pred EccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEc
Q 039925 229 AMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSV 308 (549)
Q Consensus 229 ~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 308 (549)
++++|.+++ +..+..+ ++|+.|+|++|.+++.. |..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|
T Consensus 238 ~L~~n~l~~--~~~l~~l--~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 238 KLQHNNLTD--TAWLLNY--PGLVEVDLSYNELEKIM----YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 308 (597)
T ss_dssp ECCSSCCCC--CGGGGGC--TTCSEEECCSSCCCEEE----SGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEEC
T ss_pred ECCCCCCCC--ChhhccC--CCCCEEECCCCccCCCC----HHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEEC
Confidence 777777665 3556666 77777777777777554 4566777777777777777774 5555666777777777
Q ss_pred cCCcccccCCCC----------CCCCCCCcccCCcccccccceeeecCCCCCCC
Q 039925 309 SRNKLSASLPPL----------NSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCG 352 (549)
Q Consensus 309 s~N~l~~~~p~~----------~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~ 352 (549)
++|.+++ +|.. ++++|.+..+|...+..+.. +.+.+||+.|.
T Consensus 309 s~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~-L~l~~N~~~~~ 360 (597)
T 3oja_B 309 SHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKN-LTLSHNDWDCN 360 (597)
T ss_dssp CSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSE-EECCSSCEEHH
T ss_pred CCCCCCc-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCE-EEeeCCCCCCh
Confidence 7777763 3332 77777777776555555543 67777777764
No 14
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=4.2e-31 Score=287.42 Aligned_cols=171 Identities=16% Similarity=0.130 Sum_probs=114.8
Q ss_pred CCCCCCCCCC----CCCCC----CcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeeccc
Q 039925 19 GVTSSWSNSI----DLCQW----RGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLAN 90 (549)
Q Consensus 19 ~~~~~w~~~~----~~c~w----~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 90 (549)
..+++|+.+. ++|.+ ..|.|... +.+ .||+.+. +++++|||++|+|++..+.+|.++++|++|+|++
T Consensus 11 ~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~--~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~ 85 (635)
T 4g8a_A 11 DKLAAANSSIPESWEPCVEVVPNITYQCMEL--NFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 85 (635)
T ss_dssp --------------CCSEEEETTTEEECTTS--CCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred chhhcccCCCCCCCCCccccCCCCEEECCCC--CcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCC
Confidence 3555554333 34543 23567542 333 4565443 3678888888888865566788888888888888
Q ss_pred ccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCccee-c
Q 039925 91 NHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSG-L 169 (549)
Q Consensus 91 n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~ 169 (549)
|+|++..|.+|.++++| ++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+.+ .
T Consensus 86 N~i~~i~~~~f~~L~~L-~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~ 164 (635)
T 4g8a_A 86 CEIQTIEDGAYQSLSHL-STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 164 (635)
T ss_dssp CCCCEECTTTTTTCTTC-CEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCCcChhHhcCCCCC-CEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCC
Confidence 88875556667788888 888888888877767778888888888888888876555667888888888888888764 3
Q ss_pred ccccccccc-cceeeCCCCcCcccCch
Q 039925 170 IPSFIFNIS-LKWNFLPENSFTGNLPL 195 (549)
Q Consensus 170 ~p~~~~~l~-L~~L~l~~n~l~~~~p~ 195 (549)
.|..+..++ |++|++++|++++..+.
T Consensus 165 ~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 165 LPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CchhhccchhhhhhcccCccccccccc
Confidence 566777777 88888888777644443
No 15
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.6e-31 Score=274.47 Aligned_cols=278 Identities=18% Similarity=0.175 Sum_probs=203.8
Q ss_pred eecCccccCCCCCCEEEccCCcceecC-CccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccc
Q 039925 47 KCLTPHVGNFGYLRFINLVDNNFRGEI-PEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDF 125 (549)
Q Consensus 47 g~lp~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~ 125 (549)
+..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|.++++| ++|++++|.+++..+..
T Consensus 44 ~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~ 122 (455)
T 3v47_A 44 ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANL-EVLTLTQCNLDGAVLSG 122 (455)
T ss_dssp EECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTC-CEEECTTSCCBTHHHHS
T ss_pred cCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccC-CEEeCCCCCCCccccCc
Confidence 334667777777777777777776444 4567777778888888777776667777777777 78888887777654443
Q ss_pred --cCCCCCCCEEEeecceeeeeCCcc-ccCCCCCCEEecccCcceeccccccccc-------------------------
Q 039925 126 --IGNPSAIQVMIFKENSLEGKFPNT-LSNLRSLFYDNINRNEFSGLIPSFIFNI------------------------- 177 (549)
Q Consensus 126 --~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l------------------------- 177 (549)
|..+++|++|+|++|.+++..|.. +.++++|++|++++|.+.+..+..+..+
T Consensus 123 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~ 202 (455)
T 3v47_A 123 NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW 202 (455)
T ss_dssp STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH
T ss_pred ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc
Confidence 777778888888888777665655 6777888888888887776666555433
Q ss_pred ---------c-cceeeCCCCcCcccCchhhhhc--------------------------------------CCCCcEeee
Q 039925 178 ---------S-LKWNFLPENSFTGNLPLEIGVT--------------------------------------LPKGRNYYI 209 (549)
Q Consensus 178 ---------~-L~~L~l~~n~l~~~~p~~~~~~--------------------------------------l~~L~~L~l 209 (549)
+ |++|++++|.+++..|..+... .++|+.|++
T Consensus 203 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l 282 (455)
T 3v47_A 203 EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDL 282 (455)
T ss_dssp HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEEC
T ss_pred cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEe
Confidence 4 6667777776665555554321 123444444
Q ss_pred cc-ccccc--ccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccC
Q 039925 210 LL-LAQKL--YWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDN 286 (549)
Q Consensus 210 ~~-~~~~l--~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~ 286 (549)
++ .+... ..+...++|+.|++++|.+.+..|..|..+ ++|+.|+|++|.+++.. |..+..+++|++|+|++
T Consensus 283 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 283 SKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL--THLLKLNLSQNFLGSID----SRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC--TTCCEEECCSSCCCEEC----GGGGTTCTTCCEEECCS
T ss_pred cCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc--ccCCEEECCCCccCCcC----hhHhcCcccCCEEECCC
Confidence 43 11111 123345689999999999999889899999 99999999999998544 67889999999999999
Q ss_pred ccccccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCCCc-ccC
Q 039925 287 NKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNHSF-SCP 331 (549)
Q Consensus 287 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~-~ip 331 (549)
|++++..|..|..+++|+.|++++|++++..+.. ++++|++. .+|
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999888999999999999999999999744422 88888854 444
No 16
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=8.2e-31 Score=275.48 Aligned_cols=304 Identities=18% Similarity=0.116 Sum_probs=248.6
Q ss_pred CceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccc
Q 039925 43 QRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQL 122 (549)
Q Consensus 43 ~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~ 122 (549)
.++.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|.++++| ++|+|++|.+++..
T Consensus 42 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~i~~~~ 120 (477)
T 2id5_A 42 NRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNL-TKLDISENKIVILL 120 (477)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTC-CEEECTTSCCCEEC
T ss_pred CccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCC-CEEECCCCccccCC
Confidence 34555557799999999999999999998889999999999999999999995445568899999 99999999999999
Q ss_pred ccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcC
Q 039925 123 LDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTL 201 (549)
Q Consensus 123 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l 201 (549)
+..|.++++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..++ |+.|++++|.+.+..+..+. .+
T Consensus 121 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~-~l 199 (477)
T 2id5_A 121 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFK-RL 199 (477)
T ss_dssp TTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSC-SC
T ss_pred hhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcc-cC
Confidence 99999999999999999999988899999999999999999999977777899999 99999999999965555555 89
Q ss_pred CCCcEeeeccc--ccccc-cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccc
Q 039925 202 PKGRNYYILLL--AQKLY-WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTL 278 (549)
Q Consensus 202 ~~L~~L~l~~~--~~~l~-~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~ 278 (549)
++|+.|+++++ ...+. ......+|+.|++++|.++...+..+..+ ++|+.|+|++|.+++.. +..+..+++
T Consensus 200 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~----~~~~~~l~~ 273 (477)
T 2id5_A 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL--VYLRFLNLSYNPISTIE----GSMLHELLR 273 (477)
T ss_dssp TTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC--TTCCEEECCSSCCCEEC----TTSCTTCTT
T ss_pred cccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc--cccCeeECCCCcCCccC----hhhcccccc
Confidence 99999999872 11111 11112389999999999996655778888 99999999999998544 467889999
Q ss_pred cCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCCCcccCC-cc-cccccceeeecC
Q 039925 279 LTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNHSFSCPG-FE-FSVIKLEFQIPG 346 (549)
Q Consensus 279 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~-~~-~~~l~l~~~~~g 346 (549)
|++|+|++|++++..|..|..+++|+.|+|++|++++..+.. ++++|++..-.. .. +... ....+.+
T Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~-~~~~~~~ 352 (477)
T 2id5_A 274 LQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRR-WRLNFNR 352 (477)
T ss_dssp CCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTT-TSSCCTT
T ss_pred CCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhh-hccccCc
Confidence 999999999999888999999999999999999998644322 788888442211 11 1111 1144667
Q ss_pred CCCCCCCcc
Q 039925 347 NKKLCGGLD 355 (549)
Q Consensus 347 n~~~c~~~~ 355 (549)
+...|..+.
T Consensus 353 ~~~~C~~p~ 361 (477)
T 2id5_A 353 QQPTCATPE 361 (477)
T ss_dssp CCCBEEESG
T ss_pred cCceeCCch
Confidence 777786543
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=3.6e-31 Score=287.33 Aligned_cols=308 Identities=16% Similarity=0.202 Sum_probs=244.8
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCC----CCCCCc-ceeCCCC---CceEeecCccccCCCCCCEEEccCCcceecCCcccc
Q 039925 7 LLAIKSLLHDRRGVTSSWSNSID----LCQWRG-VTCTHQH---QRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVG 78 (549)
Q Consensus 7 l~~~~~~~~~~~~~~~~w~~~~~----~c~w~g-v~c~~~~---~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 78 (549)
-.++++-...- ...+|....+ .|.|.. ..|. .| .+|+-. .-.+++.|+|++|.+.|.+|.+|+
T Consensus 32 ~~aL~~~~~~~--~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~------~~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 32 YLALKEIWDAL--NGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLN------SNGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHT--TGGGCCCCC------CCCCCSSCGG-GTTCCTTEEEC------TTCCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHc--CCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEc------CCCCEEEEEecCcccCCcCChHHh
Confidence 34555444222 3347864442 347963 3332 35 667621 115799999999999999999999
Q ss_pred CCCCCCEeeccccc------------------------------------------------------------------
Q 039925 79 RLFRLEYLLLANNH------------------------------------------------------------------ 92 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~------------------------------------------------------------------ 92 (549)
+|++|++|+|++|.
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 99999999999984
Q ss_pred ------------ccccCCcccccccCccceeeecccccccc-----------------cccccC--CCCCCCEEEeecce
Q 039925 93 ------------FSGKIPANLSHCSNLLTKLFICETHLSGQ-----------------LLDFIG--NPSAIQVMIFKENS 141 (549)
Q Consensus 93 ------------l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~n~ 141 (549)
+++ +|..++++++| ++|+|++|.+++. +|..++ ++++|++|+|++|.
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~ 260 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKL-RQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP 260 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTC-CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCC-CEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc
Confidence 444 88889999999 9999999999985 899998 99999999999999
Q ss_pred eeeeCCccccCCCCCCEEecccCc-cee-ccccccccc------c-cceeeCCCCcCcccCch--hhhhcCCCCcEeeec
Q 039925 142 LEGKFPNTLSNLRSLFYDNINRNE-FSG-LIPSFIFNI------S-LKWNFLPENSFTGNLPL--EIGVTLPKGRNYYIL 210 (549)
Q Consensus 142 l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l------~-L~~L~l~~n~l~~~~p~--~~~~~l~~L~~L~l~ 210 (549)
+.+.+|..|+++++|++|++++|+ +++ .+|..+..+ + |++|++++|.++ .+|. .+. .+++|+.|+++
T Consensus 261 l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~-~l~~L~~L~L~ 338 (636)
T 4eco_A 261 NLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQ-KMKKLGMLECL 338 (636)
T ss_dssp TCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHT-TCTTCCEEECC
T ss_pred CCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhc-cCCCCCEEeCc
Confidence 999999999999999999999998 888 899888876 7 999999999999 8998 777 89999999998
Q ss_pred c-ccc-ccccccCcccccEEEccccccccccChhhhhccccC-ccEEEcCCCcccccCCCcCccccCCcc--ccCeeecc
Q 039925 211 L-LAQ-KLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVN-LYALTMVKNKLSGPIPHHIASSLGNLT--LLTYLALD 285 (549)
Q Consensus 211 ~-~~~-~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~-L~~L~L~~n~l~~~~p~~l~~~l~~l~--~L~~L~Ls 285 (549)
+ .+. .+..+...++|+.|++++|.++ .+|..+..+ ++ |+.|++++|.++ .+ |..+..++ +|++|+++
T Consensus 339 ~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l--~~~L~~L~Ls~N~l~-~l----p~~~~~~~l~~L~~L~Ls 410 (636)
T 4eco_A 339 YNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGF--TEQVENLSFAHNKLK-YI----PNIFDAKSVSVMSAIDFS 410 (636)
T ss_dssp SCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEE--CTTCCEEECCSSCCS-SC----CSCCCTTCSSCEEEEECC
T ss_pred CCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhh--cccCcEEEccCCcCc-cc----chhhhhcccCccCEEECc
Confidence 7 333 3334444568899999999988 778888888 88 999999999888 55 44555543 78888888
Q ss_pred CccccccCCcccc-------CCCCCCEEEccCCcccccCCCC-----------CCCCCCCcccCCcccc
Q 039925 286 NNKLQGNLPSSLG-------YYQNLMELSVSRNKLSASLPPL-----------NSQHNHSFSCPGFEFS 336 (549)
Q Consensus 286 ~N~l~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~-----------~ls~N~~~~ip~~~~~ 336 (549)
+|++++.+|..+. .+++|+.|++++|+++. +|.. ++++|++..+|...+.
T Consensus 411 ~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 478 (636)
T 4eco_A 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK-FPKELFSTGSPLSSINLMGNMLTEIPKNSLK 478 (636)
T ss_dssp SSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCS-CCTHHHHTTCCCSEEECCSSCCSBCCSSSSE
T ss_pred CCcCCCcchhhhcccccccccCCCCCEEECcCCccCc-CCHHHHccCCCCCEEECCCCCCCCcCHHHhc
Confidence 8888887887777 77788888888888883 4442 7888888888887754
No 18
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=1.9e-30 Score=281.02 Aligned_cols=288 Identities=17% Similarity=0.102 Sum_probs=222.2
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEe
Q 039925 58 YLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIF 137 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 137 (549)
+|+.|++++|.+++..+..|..+++|++|++++|.++ .+|..+..+++| ++|++++|.+++..|..+..+++|++|++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 332 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTL-KKLVLSANKFENLCQISASNFPSLTHLSI 332 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTC-CEEECTTCCCSBGGGGCGGGCTTCSEEEC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccC-CEEECccCCcCcCchhhhhccCcCCEEEC
Confidence 6788888888888666667888888888888888888 778888888888 88888888888777778888888888888
Q ss_pred ecceeeeeCCcc-ccCCCCCCEEecccCcceecc--cccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc-
Q 039925 138 KENSLEGKFPNT-LSNLRSLFYDNINRNEFSGLI--PSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL- 212 (549)
Q Consensus 138 ~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~--p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~- 212 (549)
++|.+.+.+|.. +..+++|++|++++|.+.+.. +..+..++ |++|++++|.+.+..|..+. .+++|+.|+++++
T Consensus 333 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~ 411 (606)
T 3t6q_A 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFK-ECPQLELLDLAFTR 411 (606)
T ss_dssp CSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTT-TCTTCSEEECTTCC
T ss_pred CCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhc-CCccCCeEECCCCc
Confidence 888877655543 778888888888888887655 66777777 88888888888766666665 7888888888762
Q ss_pred cccc---ccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCccccc-CCCcCccccCCccccCeeeccCcc
Q 039925 213 AQKL---YWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGP-IPHHIASSLGNLTLLTYLALDNNK 288 (549)
Q Consensus 213 ~~~l---~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~-~p~~l~~~l~~l~~L~~L~Ls~N~ 288 (549)
+... ..+...++|+.|++++|.+.+..|..+..+ ++|+.|++++|.+++. ++. +..+..+++|++|++++|+
T Consensus 412 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~--~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 412 LKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL--PALQHLNLQGNHFPKGNIQK--TNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp EECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTC--TTCCEEECTTCBCGGGEECS--SCGGGGCTTCCEEECTTSC
T ss_pred CCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCC--CCCCEEECCCCCCCcccccc--chhhccCCCccEEECCCCc
Confidence 2221 123445688888898888888888888888 8899999998888753 221 3567888889999999998
Q ss_pred ccccCCccccCCCCCCEEEccCCcccccCCCC---------CCCCCCCcccCCcc---cccccceeeecCCCCCCCC
Q 039925 289 LQGNLPSSLGYYQNLMELSVSRNKLSASLPPL---------NSQHNHSFSCPGFE---FSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 289 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~---------~ls~N~~~~ip~~~---~~~l~l~~~~~gn~~~c~~ 353 (549)
+++..|..|..+++|+.|+|++|++++..|.. ++++|++..+|+.. +..+.. +.+.|||+.|..
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~c~c 563 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRT-INLRQNPLDCTC 563 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSCEEECCSSCCCCCCGGGHHHHHTSSE-EECTTCCEECSG
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCcccccEEECcCCcccccCHhhcccCCCCCE-EeCCCCCccccC
Confidence 88777888888889999999999888766543 67888888887765 333333 789999999854
No 19
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.7e-30 Score=287.48 Aligned_cols=294 Identities=17% Similarity=0.158 Sum_probs=210.6
Q ss_pred CceEeecCccccCCCCCCEEEccCCccee-----------------cCCcccc--CCCCCCEeecccccccccCCccccc
Q 039925 43 QRINKCLTPHVGNFGYLRFINLVDNNFRG-----------------EIPEKVG--RLFRLEYLLLANNHFSGKIPANLSH 103 (549)
Q Consensus 43 ~~v~g~lp~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~Ls~n~l~~~~p~~l~~ 103 (549)
.+++| ||+.|+++++|++|+|++|.+++ .+|+.++ ++++|++|+|++|.+.+.+|..|.+
T Consensus 435 N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 435 NRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred Ccccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 45666 88888888888888888888886 3777776 8888888888888887788888888
Q ss_pred ccCccceeeecccc-ccc-ccccccCCC-------CCCCEEEeecceeeeeCCc--cccCCCCCCEEecccCcceecccc
Q 039925 104 CSNLLTKLFICETH-LSG-QLLDFIGNP-------SAIQVMIFKENSLEGKFPN--TLSNLRSLFYDNINRNEFSGLIPS 172 (549)
Q Consensus 104 l~~L~~~L~Ls~n~-l~~-~~~~~~~~l-------~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~ 172 (549)
+++| ++|+|++|+ +++ .+|..++++ ++|++|+|++|.++ .+|. .|.++++|++|+|++|.+. .+|
T Consensus 514 L~~L-~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp- 589 (876)
T 4ecn_A 514 LPEL-QSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE- 589 (876)
T ss_dssp CSSC-CEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-
T ss_pred CCCC-CEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-
Confidence 8888 888888887 766 566544433 36777777777766 6666 6666666666666666665 555
Q ss_pred cccccc-cceeeCCCCcCcccCchhhhhcCC--------------------------CCcEeeeccc-c----c------
Q 039925 173 FIFNIS-LKWNFLPENSFTGNLPLEIGVTLP--------------------------KGRNYYILLL-A----Q------ 214 (549)
Q Consensus 173 ~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~--------------------------~L~~L~l~~~-~----~------ 214 (549)
.|..++ |+.|++++|.++ .+|..+. .++ +|+.|+++++ + .
T Consensus 590 ~~~~L~~L~~L~Ls~N~l~-~lp~~l~-~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l 667 (876)
T 4ecn_A 590 AFGTNVKLTDLKLDYNQIE-EIPEDFC-AFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSM 667 (876)
T ss_dssp CCCTTSEESEEECCSSCCS-CCCTTSC-EECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCT
T ss_pred hhcCCCcceEEECcCCccc-cchHHHh-hccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhh
Confidence 555555 555555555554 4443332 222 2666666541 1 1
Q ss_pred ------ccccc---------------cCcccccEEEccccccccccChhhhhcc------ccCccEEEcCCCcccccCCC
Q 039925 215 ------KLYWS---------------DVSTTATIIAMGGNQISGTITLGIKKLI------FVNLYALTMVKNKLSGPIPH 267 (549)
Q Consensus 215 ------~l~~l---------------~~~~~L~~L~l~~n~l~~~~~~~~~~l~------~~~L~~L~L~~n~l~~~~p~ 267 (549)
.+..+ ...++|+.|+|++|.+. .+|..+.... .++|+.|+|++|+++ .+
T Consensus 668 ~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~l-- 743 (876)
T 4ecn_A 668 DDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SL-- 743 (876)
T ss_dssp TTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CC--
T ss_pred ccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cc--
Confidence 11111 13358999999999998 5555443320 038999999999998 45
Q ss_pred cCccccC--CccccCeeeccCccccccCCccccCCCCCCEEEccC------CcccccCCCC----------CCCCCCCcc
Q 039925 268 HIASSLG--NLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSR------NKLSASLPPL----------NSQHNHSFS 329 (549)
Q Consensus 268 ~l~~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~------N~l~~~~p~~----------~ls~N~~~~ 329 (549)
|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|.. ++++|+++.
T Consensus 744 --p~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~ 820 (876)
T 4ecn_A 744 --SDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK 820 (876)
T ss_dssp --CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB
T ss_pred --hHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCc
Confidence 56676 89999999999999996 899999999999999976 7788888865 999999999
Q ss_pred cCCcccccccceeeecCCCCCC
Q 039925 330 CPGFEFSVIKLEFQIPGNKKLC 351 (549)
Q Consensus 330 ip~~~~~~l~l~~~~~gn~~~c 351 (549)
+|..+++.|.. +++.+|+...
T Consensus 821 Ip~~l~~~L~~-LdLs~N~l~~ 841 (876)
T 4ecn_A 821 VDEKLTPQLYI-LDIADNPNIS 841 (876)
T ss_dssp CCSCCCSSSCE-EECCSCTTCE
T ss_pred cCHhhcCCCCE-EECCCCCCCc
Confidence 99988766654 7888998654
No 20
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=7.5e-30 Score=276.31 Aligned_cols=284 Identities=16% Similarity=0.125 Sum_probs=170.6
Q ss_pred CCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceee
Q 039925 33 WRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLF 112 (549)
Q Consensus 33 w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~ 112 (549)
+..|.|+.. +++ .+|..+.. ++++|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++| ++|+
T Consensus 14 ~~~~~c~~~--~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L~ 87 (606)
T 3t6q_A 14 NKTYNCENL--GLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRL-DTLV 87 (606)
T ss_dssp TTEEECTTS--CCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTC-CEEE
T ss_pred CceEECCCC--Ccc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCcccc-Ceee
Confidence 345777643 222 34444332 45666666666655555556666666666666666655555556666666 6666
Q ss_pred ecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcc
Q 039925 113 ICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTG 191 (549)
Q Consensus 113 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~ 191 (549)
+++|.+++..|..|+++++|++|++++|.+++..+..+.++++|++|++++|.+.+.....+..++ |++|++++|.+++
T Consensus 88 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 88 LTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp CTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred CCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 666666555555566666666666666666544445555566666666666655543222233344 6666666665554
Q ss_pred cCchhhhhcCCCCc--Eeeeccc-ccc----------cccc---------------------------------------
Q 039925 192 NLPLEIGVTLPKGR--NYYILLL-AQK----------LYWS--------------------------------------- 219 (549)
Q Consensus 192 ~~p~~~~~~l~~L~--~L~l~~~-~~~----------l~~l--------------------------------------- 219 (549)
..|..+. .+++|+ .|+++.+ +.. ++.+
T Consensus 168 ~~~~~~~-~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~ 246 (606)
T 3t6q_A 168 LSKEDMS-SLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPA 246 (606)
T ss_dssp ECHHHHH-TTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGG
T ss_pred cChhhhh-hhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChh
Confidence 3344444 555555 4444430 000 0000
Q ss_pred --c-C-cccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCc
Q 039925 220 --D-V-STTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPS 295 (549)
Q Consensus 220 --~-~-~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~ 295 (549)
. . ..+|+.|++++|.+++..+..|..+ ++|+.|++++|.++ .+ |..+..+++|++|++++|.+.+..|.
T Consensus 247 ~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~-~l----p~~l~~l~~L~~L~l~~n~l~~~~~~ 319 (606)
T 3t6q_A 247 VFEGLCEMSVESINLQKHYFFNISSNTFHCF--SGLQELDLTATHLS-EL----PSGLVGLSTLKKLVLSANKFENLCQI 319 (606)
T ss_dssp GGGGGGGSEEEEEECTTCCCSSCCTTTTTTC--TTCSEEECTTSCCS-CC----CSSCCSCTTCCEEECTTCCCSBGGGG
T ss_pred HhchhhcCceeEEEeecCccCccCHHHhccc--cCCCEEeccCCccC-CC----ChhhcccccCCEEECccCCcCcCchh
Confidence 0 0 0167888888888887777778888 88888888888887 34 56677888888888888888866677
Q ss_pred cccCCCCCCEEEccCCcccccCCCC-----------CCCCCCCccc
Q 039925 296 SLGYYQNLMELSVSRNKLSASLPPL-----------NSQHNHSFSC 330 (549)
Q Consensus 296 ~l~~l~~L~~L~Ls~N~l~~~~p~~-----------~ls~N~~~~i 330 (549)
.+..+++|+.|++++|.+++.+|.. ++++|.+..+
T Consensus 320 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 365 (606)
T 3t6q_A 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETS 365 (606)
T ss_dssp CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEE
T ss_pred hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccc
Confidence 7778888888888888777665543 6667766555
No 21
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=4.8e-30 Score=287.63 Aligned_cols=82 Identities=22% Similarity=0.258 Sum_probs=64.5
Q ss_pred cccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC--------CCCCCCCcccCCccccccccee
Q 039925 271 SSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL--------NSQHNHSFSCPGFEFSVIKLEF 342 (549)
Q Consensus 271 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--------~ls~N~~~~ip~~~~~~l~l~~ 342 (549)
..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|.. ++++|++..+++..+..+.. +
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~-l 552 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSV-L 552 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCE-E
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCE-E
Confidence 34667788888888888888777777888999999999999998754433 78888888877777666654 7
Q ss_pred eecCCCCCCCC
Q 039925 343 QIPGNKKLCGG 353 (549)
Q Consensus 343 ~~~gn~~~c~~ 353 (549)
.+.|||+.|..
T Consensus 553 ~l~~Np~~C~c 563 (844)
T 3j0a_A 553 DITHNKFICEC 563 (844)
T ss_dssp EEEEECCCCSS
T ss_pred EecCCCccccc
Confidence 89999999953
No 22
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=6.2e-30 Score=261.59 Aligned_cols=294 Identities=15% Similarity=0.085 Sum_probs=232.9
Q ss_pred eecCcc-ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccc
Q 039925 47 KCLTPH-VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDF 125 (549)
Q Consensus 47 g~lp~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~ 125 (549)
+.+|.. |.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+..+++| ++|++++|.++...+..
T Consensus 58 ~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~l~~~~ 136 (390)
T 3o6n_A 58 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL-TVLVLERNDLSSLPRGI 136 (390)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTT
T ss_pred hhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCC-CEEECCCCccCcCCHHH
Confidence 467765 6889999999999999997777899999999999999999997777889999999 99999999999766667
Q ss_pred cCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccc----------------cc-cceeeCCCCc
Q 039925 126 IGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFN----------------IS-LKWNFLPENS 188 (549)
Q Consensus 126 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~----------------l~-L~~L~l~~n~ 188 (549)
|.++++|++|++++|.+++..|..|..+++|++|++++|.+++.....+.. .. |+.|++++|.
T Consensus 137 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 137 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNS 216 (390)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSC
T ss_pred hcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCe
Confidence 899999999999999999877888999999999999999988543222211 12 4555555555
Q ss_pred CcccCchhhhhcCCCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCC
Q 039925 189 FTGNLPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPH 267 (549)
Q Consensus 189 l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~ 267 (549)
+. .+|.. ..++|+.|++++ .+.....+...++|+.|++++|.+.+..|..+..+ ++|+.|+|++|++++ +
T Consensus 217 l~-~~~~~---~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~-~-- 287 (390)
T 3o6n_A 217 IN-VVRGP---VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM--QRLERLYISNNRLVA-L-- 287 (390)
T ss_dssp CC-EEECC---CCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTC--SSCCEEECCSSCCCE-E--
T ss_pred ee-ecccc---ccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHcccc--ccCCEEECCCCcCcc-c--
Confidence 55 23332 346788888887 55556666677899999999999999889999999 999999999999984 3
Q ss_pred cCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC-------CCCCCCCcccCC-ccccccc
Q 039925 268 HIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL-------NSQHNHSFSCPG-FEFSVIK 339 (549)
Q Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-------~ls~N~~~~ip~-~~~~~l~ 339 (549)
|..+..+++|++|+|++|++. .+|..+..+++|+.|++++|+++...... ++++|++..... .++..+.
T Consensus 288 --~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 364 (390)
T 3o6n_A 288 --NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVA 364 (390)
T ss_dssp --ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred --CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchhHHHHHHHHH
Confidence 556788999999999999999 67888899999999999999998642222 888888443211 1122221
Q ss_pred ceeeecCCCCCCCCc
Q 039925 340 LEFQIPGNKKLCGGL 354 (549)
Q Consensus 340 l~~~~~gn~~~c~~~ 354 (549)
- ..+.+++..|...
T Consensus 365 ~-~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 365 R-PAVDDADQHCKID 378 (390)
T ss_dssp T-TTBCCCCSCCCTT
T ss_pred h-hcccccCceeccc
Confidence 1 3456777778653
No 23
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=4.9e-30 Score=276.75 Aligned_cols=302 Identities=15% Similarity=0.092 Sum_probs=241.6
Q ss_pred eecCcc-ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccc
Q 039925 47 KCLTPH-VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDF 125 (549)
Q Consensus 47 g~lp~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~ 125 (549)
+.+|+. |.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+.+++| ++|+|++|.++...+..
T Consensus 64 ~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~l~~~~ 142 (597)
T 3oja_B 64 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL-TVLVLERNDLSSLPRGI 142 (597)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTT
T ss_pred CCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCC-CEEEeeCCCCCCCCHHH
Confidence 567664 6889999999999999998888899999999999999999998777788999999 99999999999777777
Q ss_pred cCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccc----------------cc-cceeeCCCCc
Q 039925 126 IGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFN----------------IS-LKWNFLPENS 188 (549)
Q Consensus 126 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~----------------l~-L~~L~l~~n~ 188 (549)
|+++++|++|+|++|.+++..|..|..+++|++|++++|.+.+.....+.. .. |+.|++++|.
T Consensus 143 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~ 222 (597)
T 3oja_B 143 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNS 222 (597)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSC
T ss_pred hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCc
Confidence 899999999999999999888889999999999999999998643222211 12 5555555555
Q ss_pred CcccCchhhhhcCCCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCC
Q 039925 189 FTGNLPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPH 267 (549)
Q Consensus 189 l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~ 267 (549)
+. .++.. ..++|+.|++++ .+.....+...++|+.|++++|.+.+..|..|..+ ++|+.|+|++|.+++ +
T Consensus 223 l~-~~~~~---~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~-l-- 293 (597)
T 3oja_B 223 IN-VVRGP---VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM--QRLERLYISNNRLVA-L-- 293 (597)
T ss_dssp CC-EEECS---CCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTC--SSCCEEECTTSCCCE-E--
T ss_pred cc-ccccc---cCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCc--cCCCEEECCCCCCCC-C--
Confidence 55 33332 236899999987 55666667777899999999999999999999999 999999999999984 3
Q ss_pred cCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC-------CCCCCCCcc-cCCccccccc
Q 039925 268 HIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL-------NSQHNHSFS-CPGFEFSVIK 339 (549)
Q Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-------~ls~N~~~~-ip~~~~~~l~ 339 (549)
|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++..+.. ++++|++.. .+..++..+.
T Consensus 294 --~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 370 (597)
T 3oja_B 294 --NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVA 370 (597)
T ss_dssp --ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred --CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChhHHHHHHHHh
Confidence 566788999999999999999 78888999999999999999998653222 888888432 2222233222
Q ss_pred ceeeecCCCCCCCCccccCcccC
Q 039925 340 LEFQIPGNKKLCGGLDELHLLSC 362 (549)
Q Consensus 340 l~~~~~gn~~~c~~~~~~~~~~~ 362 (549)
. ..+.+++..|+.........|
T Consensus 371 ~-~~~~~~~~~C~~~~~~~~~~c 392 (597)
T 3oja_B 371 R-PAVDDADQHCKIDYQLEHGLC 392 (597)
T ss_dssp T-TTBCCCCCCCCTTCEEETTEE
T ss_pred h-hccccccccCCcchhccCCcc
Confidence 2 346788889986544333444
No 24
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=7.7e-31 Score=264.56 Aligned_cols=286 Identities=14% Similarity=0.183 Sum_probs=214.7
Q ss_pred CCCCCCCCCCCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCccc
Q 039925 22 SSWSNSIDLCQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANL 101 (549)
Q Consensus 22 ~~w~~~~~~c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l 101 (549)
..|......|.|.|+ |+....+++ .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..|..|
T Consensus 21 ~~~~~~~~~C~~~~~-c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 96 (353)
T 2z80_A 21 ESSNQASLSCDRNGI-CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSF 96 (353)
T ss_dssp ------CCEECTTSE-EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCccCCCCCCCeE-eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhc
Confidence 346566678999998 776555555 7787665 589999999999997666689999999999999999997778889
Q ss_pred ccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCc--cccCCCCCCEEecccC-cceecccccccccc
Q 039925 102 SHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPN--TLSNLRSLFYDNINRN-EFSGLIPSFIFNIS 178 (549)
Q Consensus 102 ~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~ 178 (549)
.++++| ++|++++|++++..+..|+++++|++|++++|.++ .+|. .+..+++|++|++++| .+....+..+..++
T Consensus 97 ~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 174 (353)
T 2z80_A 97 SSLGSL-EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT 174 (353)
T ss_dssp TTCTTC-CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred CCCCCC-CEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCC
Confidence 999999 99999999999777777999999999999999999 5555 7899999999999999 47766778899999
Q ss_pred -cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc-ccccc--cccCcccccEEEccccccccccChhhh---hccccCc
Q 039925 179 -LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL-AQKLY--WSDVSTTATIIAMGGNQISGTITLGIK---KLIFVNL 251 (549)
Q Consensus 179 -L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~-~~~l~--~l~~~~~L~~L~l~~n~l~~~~~~~~~---~l~~~~L 251 (549)
|++|++++|.+++..|..+. .+++|++|+++.+ +..+. .....++|+.|++++|.+++..+..+. .. ..+
T Consensus 175 ~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~--~~l 251 (353)
T 2z80_A 175 FLEELEIDASDLQSYEPKSLK-SIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETN--SLI 251 (353)
T ss_dssp EEEEEEEEETTCCEECTTTTT-TCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CC--CCC
T ss_pred CCCEEECCCCCcCccCHHHHh-ccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccccc--chh
Confidence 99999999999977787777 7787777777662 22211 112245777777777777765443332 23 556
Q ss_pred cEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCcc-ccCCCCCCEEEccCCcccccC
Q 039925 252 YALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSS-LGYYQNLMELSVSRNKLSASL 317 (549)
Q Consensus 252 ~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~ 317 (549)
+.++++++.+++..-..+|..+..+++|++|++++|+++ .+|.. |..+++|+.|++++|++++..
T Consensus 252 ~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 252 KKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 667777666654211123566777778888888888887 55554 477788888888888777643
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=7e-30 Score=271.37 Aligned_cols=275 Identities=17% Similarity=0.134 Sum_probs=170.6
Q ss_pred cCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccc-ccccccC
Q 039925 49 LTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSG-QLLDFIG 127 (549)
Q Consensus 49 lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~-~~~~~~~ 127 (549)
.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++| ++|++++|.+++ .+|..|+
T Consensus 37 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L-~~L~L~~N~l~~~~~p~~~~ 112 (520)
T 2z7x_B 37 WTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNL-KHLDLSFNAFDALPICKEFG 112 (520)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCC-SEEECCSSCCSSCCCCGGGG
T ss_pred ChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCc-cEEeccCCccccccchhhhc
Confidence 3456777777888888877777666777777777888888777777 56655 67777 777777777776 3567777
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCC--CEEecccCcc--eecccccccc---------------------------
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSL--FYDNINRNEF--SGLIPSFIFN--------------------------- 176 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~~~~--------------------------- 176 (549)
++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+..|..+..
T Consensus 113 ~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l 189 (520)
T 2z7x_B 113 NMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTV 189 (520)
T ss_dssp GCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTC
T ss_pred cCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcc
Confidence 77777777777777653 234444444 5555555544 2222222211
Q ss_pred --------------------------------------------------------cc-cceeeCCCCcCcccCchhhh-
Q 039925 177 --------------------------------------------------------IS-LKWNFLPENSFTGNLPLEIG- 198 (549)
Q Consensus 177 --------------------------------------------------------l~-L~~L~l~~n~l~~~~p~~~~- 198 (549)
.+ |++|++++|.+++.+|..++
T Consensus 190 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 269 (520)
T 2z7x_B 190 ANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFD 269 (520)
T ss_dssp SEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCC
T ss_pred cceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhh
Confidence 11 44455555555555555441
Q ss_pred ---hcCCCCcEeee--------------------------cc-cccccccccCcccccEEEccccccccccChhhhhccc
Q 039925 199 ---VTLPKGRNYYI--------------------------LL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIF 248 (549)
Q Consensus 199 ---~~l~~L~~L~l--------------------------~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 248 (549)
..+++|+.+++ ++ .+.........++|++|++++|.+++..|..+..+
T Consensus 270 ~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-- 347 (520)
T 2z7x_B 270 YSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHL-- 347 (520)
T ss_dssp CCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCC--
T ss_pred cccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccC--
Confidence 13444444443 33 11111111344577888888888877777777777
Q ss_pred cCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCc-cccCCCCCCEEEccCCcccccCCCC-------
Q 039925 249 VNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPS-SLGYYQNLMELSVSRNKLSASLPPL------- 320 (549)
Q Consensus 249 ~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~------- 320 (549)
++|+.|++++|++++.. .+|..+..+++|++|++++|++++.+|. .+..+++|+.|++++|++++.+|..
T Consensus 348 ~~L~~L~L~~N~l~~l~--~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~ 425 (520)
T 2z7x_B 348 TELETLILQMNQLKELS--KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKV 425 (520)
T ss_dssp SSCCEEECCSSCCCBHH--HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCE
T ss_pred CCCCEEEccCCccCccc--cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCE
Confidence 77888888888777411 1245677777777777777777754554 3666777777777777776544322
Q ss_pred -CCCCCCCcccCCcc
Q 039925 321 -NSQHNHSFSCPGFE 334 (549)
Q Consensus 321 -~ls~N~~~~ip~~~ 334 (549)
++++|++..+|..+
T Consensus 426 L~Ls~N~l~~ip~~~ 440 (520)
T 2z7x_B 426 LDLHSNKIKSIPKQV 440 (520)
T ss_dssp EECCSSCCCCCCGGG
T ss_pred EECCCCcccccchhh
Confidence 66666666666655
No 26
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.6e-29 Score=250.92 Aligned_cols=246 Identities=21% Similarity=0.308 Sum_probs=209.5
Q ss_pred CCCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccc
Q 039925 30 LCQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLT 109 (549)
Q Consensus 30 ~c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 109 (549)
.|+|+.+.|+.. +++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++| +
T Consensus 30 ~c~l~~l~~~~~--~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~ 103 (330)
T 1xku_A 30 QCHLRVVQCSDL--GLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL-E 103 (330)
T ss_dssp EEETTEEECTTS--CCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTC-C
T ss_pred cCCCeEEEecCC--Ccc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCC-C
Confidence 368999999653 233 5666554 689999999999997666789999999999999999997778999999999 9
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCccee--cccccccccc-cceeeCCC
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSG--LIPSFIFNIS-LKWNFLPE 186 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~-L~~L~l~~ 186 (549)
+|++++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+.. ..+..+..++ |++|++++
T Consensus 104 ~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 104 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp EEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred EEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 9999999998 4555443 799999999999997777789999999999999999864 6677888898 99999999
Q ss_pred CcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCC
Q 039925 187 NSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 187 n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
|.++ .+|..+. ++|+.|++++|.+++..+..+..+ ++|+.|++++|.+++..
T Consensus 181 n~l~-~l~~~~~------------------------~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~- 232 (330)
T 1xku_A 181 TNIT-TIPQGLP------------------------PSLTELHLDGNKITKVDAASLKGL--NNLAKLGLSFNSISAVD- 232 (330)
T ss_dssp SCCC-SCCSSCC------------------------TTCSEEECTTSCCCEECTGGGTTC--TTCCEEECCSSCCCEEC-
T ss_pred Cccc-cCCcccc------------------------ccCCEEECCCCcCCccCHHHhcCC--CCCCEEECCCCcCceeC-
Confidence 9988 4554432 478999999999998888899999 99999999999998644
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccccc
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSAS 316 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 316 (549)
+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++.
T Consensus 233 ---~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 233 ---NGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp ---TTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred ---hhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCcc
Confidence 457888999999999999999 7888999999999999999999863
No 27
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=1.6e-29 Score=271.16 Aligned_cols=285 Identities=16% Similarity=0.172 Sum_probs=189.5
Q ss_pred CcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeee
Q 039925 34 RGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFI 113 (549)
Q Consensus 34 ~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~L 113 (549)
..+.|+. .+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++| ++|++
T Consensus 34 ~~l~ls~--~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~L 107 (562)
T 3a79_B 34 SMVDYSN--RNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDL-EYLDV 107 (562)
T ss_dssp CEEECTT--SCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTC-CEEEC
T ss_pred cEEEcCC--CCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCC-CEEEC
Confidence 3466654 3344 4666554 678888888888886566778888888888888888886667778888888 88888
Q ss_pred cccccccccccccCCCCCCCEEEeecceeee-eCCccccCCCCCCEEecccCcceecccccccccc-c--ceeeCCCCcC
Q 039925 114 CETHLSGQLLDFIGNPSAIQVMIFKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-L--KWNFLPENSF 189 (549)
Q Consensus 114 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L--~~L~l~~n~l 189 (549)
++|+++ .+|.. .+++|++|++++|.+++ ..|..|.++++|++|++++|.+.+. .+..++ | ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 888887 44544 67888888888888875 2456788888888888888777642 233333 3 5555555555
Q ss_pred --cccCchhhhh-----------------------------------------------------cC-------------
Q 039925 190 --TGNLPLEIGV-----------------------------------------------------TL------------- 201 (549)
Q Consensus 190 --~~~~p~~~~~-----------------------------------------------------~l------------- 201 (549)
++..|..+.. .+
T Consensus 182 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred cccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 3222222210 00
Q ss_pred --------------CCCcEeeeccc-cc----------------------------------------------------
Q 039925 202 --------------PKGRNYYILLL-AQ---------------------------------------------------- 214 (549)
Q Consensus 202 --------------~~L~~L~l~~~-~~---------------------------------------------------- 214 (549)
++|++|+++++ +.
T Consensus 262 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESS
T ss_pred cHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCC
Confidence 13333333320 00
Q ss_pred ---ccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccc
Q 039925 215 ---KLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQG 291 (549)
Q Consensus 215 ---~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (549)
........++|++|++++|.+++..|..+..+ ++|+.|++++|++++.. .+|..+..+++|++|++++|++++
T Consensus 342 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~--~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 342 PFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTL--KRLQTLILQRNGLKNFF--KVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp CCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSC--SSCCEEECCSSCCCBTT--HHHHTTTTCTTCCEEECTTSCCBS
T ss_pred CcccccCccCCCCceEEECCCCccccchhhhhccc--CCCCEEECCCCCcCCcc--cchhhhcCCCCCCEEECCCCcCCC
Confidence 00000344688899999999988888888888 88999999999887421 224567888888888888888886
Q ss_pred cCCc-cccCCCCCCEEEccCCcccccCCCC--------CCCCCCCcccCCcc
Q 039925 292 NLPS-SLGYYQNLMELSVSRNKLSASLPPL--------NSQHNHSFSCPGFE 334 (549)
Q Consensus 292 ~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~--------~ls~N~~~~ip~~~ 334 (549)
.+|. .+..+++|+.|++++|++++.+|.. ++++|++..+|..+
T Consensus 418 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~ 469 (562)
T 3a79_B 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDV 469 (562)
T ss_dssp CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTT
T ss_pred ccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhh
Confidence 4554 4677788888888888877654432 66777766776655
No 28
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2.1e-29 Score=251.89 Aligned_cols=245 Identities=22% Similarity=0.308 Sum_probs=208.2
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccce
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTK 110 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~ 110 (549)
|+|+.+.|+.. +++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++| ++
T Consensus 33 c~l~~l~~~~~--~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~ 106 (332)
T 2ft3_A 33 CHLRVVQCSDL--GLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKL-QK 106 (332)
T ss_dssp EETTEEECCSS--CCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTC-CE
T ss_pred ccCCEEECCCC--Ccc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCC-CE
Confidence 68999999653 333 6777663 689999999999997778899999999999999999997778899999999 99
Q ss_pred eeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCccee--cccccccccccceeeCCCCc
Q 039925 111 LFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSG--LIPSFIFNISLKWNFLPENS 188 (549)
Q Consensus 111 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~L~~L~l~~n~ 188 (549)
|++++|.++ .+|..+. ++|++|++++|.++...+..|..+++|++|++++|.+.. ..+..+..+.|++|++++|.
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~ 183 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAK 183 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSB
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCC
Confidence 999999998 4555443 899999999999996666679999999999999999963 56777777789999999999
Q ss_pred CcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCc
Q 039925 189 FTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHH 268 (549)
Q Consensus 189 l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~ 268 (549)
++ .+|..+. ++|+.|++++|.+++..+..+..+ ++|+.|++++|.+++..
T Consensus 184 l~-~l~~~~~------------------------~~L~~L~l~~n~i~~~~~~~l~~l--~~L~~L~L~~N~l~~~~--- 233 (332)
T 2ft3_A 184 LT-GIPKDLP------------------------ETLNELHLDHNKIQAIELEDLLRY--SKLYRLGLGHNQIRMIE--- 233 (332)
T ss_dssp CS-SCCSSSC------------------------SSCSCCBCCSSCCCCCCTTSSTTC--TTCSCCBCCSSCCCCCC---
T ss_pred CC-ccCcccc------------------------CCCCEEECCCCcCCccCHHHhcCC--CCCCEEECCCCcCCcCC---
Confidence 98 4665432 378889999999998888888888 99999999999998544
Q ss_pred CccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccccc
Q 039925 269 IASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSAS 316 (549)
Q Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 316 (549)
+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++.
T Consensus 234 -~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 234 -NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp -TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred -hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 457888999999999999999 7888899999999999999999863
No 29
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=8.4e-29 Score=266.04 Aligned_cols=143 Identities=20% Similarity=0.157 Sum_probs=110.3
Q ss_pred eecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccccc
Q 039925 47 KCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 47 g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++| ++|++++|.++...+..|
T Consensus 42 ~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~l~~~~~ 120 (570)
T 2z63_A 42 HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL-QKLVAVETNLASLENFPI 120 (570)
T ss_dssp EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC-CEEECTTSCCCCSTTCSC
T ss_pred ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccc-ccccccccccccCCCccc
Confidence 3345578888888888888888887667788888888888888888886666778888888 888888888886666678
Q ss_pred CCCCCCCEEEeecceeee-eCCccccCCCCCCEEecccCcceecccccccccc-c----ceeeCCCCcCc
Q 039925 127 GNPSAIQVMIFKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-L----KWNFLPENSFT 190 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L----~~L~l~~n~l~ 190 (549)
+++++|++|++++|.+++ .+|..|.++++|++|++++|.+.+..+..+..++ | +.|++++|.++
T Consensus 121 ~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~ 190 (570)
T 2z63_A 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (570)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred cccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCce
Confidence 888888888888888875 3688888888888888888887766665555555 5 55555555544
No 30
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=1.6e-28 Score=269.47 Aligned_cols=300 Identities=16% Similarity=0.128 Sum_probs=184.1
Q ss_pred cCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccc-----cCCc----ccccccCccceeeecccccc
Q 039925 49 LTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSG-----KIPA----NLSHCSNLLTKLFICETHLS 119 (549)
Q Consensus 49 lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~-----~~p~----~l~~l~~L~~~L~Ls~n~l~ 119 (549)
.|..|..+++|++|++++|.+++..|..|.++++|++|++++|...+ .+|. .+..+++| ++|++++|.++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L-~~L~l~~n~l~ 342 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCL-EHLNMEDNDIP 342 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTC-CEEECCSCCBC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCC-CEEECCCCccC
Confidence 34445555555555555555554444444444444444444433221 1221 34455555 66666666666
Q ss_pred cccccccCCCCCCCEEEeecc----------------------------eeeeeCCccccCCCCCCEEecccCcceeccc
Q 039925 120 GQLLDFIGNPSAIQVMIFKEN----------------------------SLEGKFPNTLSNLRSLFYDNINRNEFSGLIP 171 (549)
Q Consensus 120 ~~~~~~~~~l~~L~~L~L~~n----------------------------~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 171 (549)
+..+..|.++++|++|++++| ++++..|..|..+++|++|++++|.+.+.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 555555555555555555444 3333344445555555555555555544333
Q ss_pred -ccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc-cccc----ccccCcccccEEEccccccccccChhhh
Q 039925 172 -SFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL-AQKL----YWSDVSTTATIIAMGGNQISGTITLGIK 244 (549)
Q Consensus 172 -~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~-~~~l----~~l~~~~~L~~L~l~~n~l~~~~~~~~~ 244 (549)
..+.+++ |++|++++|++.+..+..+. .+++|+.|+++.+ +..+ ..+...++|+.|++++|++++..+..+.
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFA-LVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE 501 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTT-TCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhh-cCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhc
Confidence 3444454 55555555555433333333 4555555555541 1111 1233446899999999999987777888
Q ss_pred hccccCccEEEcCCCcccccCCCcC----ccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC
Q 039925 245 KLIFVNLYALTMVKNKLSGPIPHHI----ASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL 320 (549)
Q Consensus 245 ~l~~~~L~~L~L~~n~l~~~~p~~l----~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 320 (549)
.+ ++|+.|++++|++++..+..+ +..+..+++|++|+|++|+++...+..|.++++|+.|+|++|++++..+..
T Consensus 502 ~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 579 (680)
T 1ziw_A 502 GL--EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579 (680)
T ss_dssp TC--TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cc--cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhH
Confidence 88 999999999999885422221 234788999999999999999433456899999999999999999644432
Q ss_pred ----------CCCCCCCcccCCccc----ccccceeeecCCCCCCCC
Q 039925 321 ----------NSQHNHSFSCPGFEF----SVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 321 ----------~ls~N~~~~ip~~~~----~~l~l~~~~~gn~~~c~~ 353 (549)
++++|++..+|+..+ ..+.. +.+.|||+.|..
T Consensus 580 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~-l~l~~N~~~c~c 625 (680)
T 1ziw_A 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE-LDMRFNPFDCTC 625 (680)
T ss_dssp TTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSE-EECTTCCCCBCC
T ss_pred hCCCCCCCEEECCCCcCCccChhHhcccccccCE-EEccCCCcccCC
Confidence 889999988888653 33433 789999999964
No 31
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.8e-29 Score=249.39 Aligned_cols=250 Identities=17% Similarity=0.179 Sum_probs=213.2
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccc--cCCcccccccCcc
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSG--KIPANLSHCSNLL 108 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~ 108 (549)
|.|.++.|+.. +++ .+|..+. ++|++|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|
T Consensus 7 C~~~~l~c~~~--~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L- 80 (306)
T 2z66_A 7 CSGTEIRCNSK--GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSL- 80 (306)
T ss_dssp EETTEEECCSS--CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCC-
T ss_pred eCCCEEEcCCC--Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccccccc-
Confidence 79999999753 333 5666553 689999999999994334458999999999999999983 336778889999
Q ss_pred ceeeecccccccccccccCCCCCCCEEEeecceeeeeCC-ccccCCCCCCEEecccCcceecccccccccc-cceeeCCC
Q 039925 109 TKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFP-NTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPE 186 (549)
Q Consensus 109 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~ 186 (549)
++|++++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+..++ |++|++++
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 159 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159 (306)
T ss_dssp CEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCC
Confidence 99999999998 467779999999999999999995544 5799999999999999999988889999999 99999999
Q ss_pred CcCcc-cCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccC
Q 039925 187 NSFTG-NLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPI 265 (549)
Q Consensus 187 n~l~~-~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~ 265 (549)
|.+++ .+|..+. .+ ++|+.|++++|.+++..|..+..+ ++|+.|++++|.+++..
T Consensus 160 n~l~~~~~~~~~~-~l---------------------~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 160 NSFQENFLPDIFT-EL---------------------RNLTFLDLSQCQLEQLSPTAFNSL--SSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp CEEGGGEECSCCT-TC---------------------TTCCEEECTTSCCCEECTTTTTTC--TTCCEEECTTSCCSBCC
T ss_pred CccccccchhHHh-hC---------------------cCCCEEECCCCCcCCcCHHHhcCC--CCCCEEECCCCccCccC
Confidence 99986 3555443 22 378899999999998888899999 99999999999998543
Q ss_pred CCcCccccCCccccCeeeccCccccccCCccccCCC-CCCEEEccCCcccc
Q 039925 266 PHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQ-NLMELSVSRNKLSA 315 (549)
Q Consensus 266 p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~ 315 (549)
+..+..+++|++|+|++|++++..|..+..++ +|+.|+|++|++++
T Consensus 216 ----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 216 ----TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp ----SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ----hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 45688999999999999999988898999885 99999999999986
No 32
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=281.23 Aligned_cols=261 Identities=15% Similarity=0.104 Sum_probs=176.7
Q ss_pred eecCccccCCCCCCEEEccCCcceecC-CccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccc
Q 039925 47 KCLTPHVGNFGYLRFINLVDNNFRGEI-PEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDF 125 (549)
Q Consensus 47 g~lp~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~ 125 (549)
+..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|.++++| ++|+|++|.+++..|..
T Consensus 38 ~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~Ls~n~l~~~~~~~ 116 (844)
T 3j0a_A 38 TVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHL-FELRLYFCGLSDAVLKD 116 (844)
T ss_dssp EECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSC-CCEECTTCCCSSCCSTT
T ss_pred ccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCccc-CEeeCcCCCCCcccccC
Confidence 455778888888999999888655455 7788888999999999998887778888888888 89999999888766554
Q ss_pred --cCCCCCCCEEEeecceeeeeCC-ccccCCCCCCEEecccCcceeccccccccc--c-cceeeCCCCcCcccCchhhhh
Q 039925 126 --IGNPSAIQVMIFKENSLEGKFP-NTLSNLRSLFYDNINRNEFSGLIPSFIFNI--S-LKWNFLPENSFTGNLPLEIGV 199 (549)
Q Consensus 126 --~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l--~-L~~L~l~~n~l~~~~p~~~~~ 199 (549)
|+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+.+..+..+..+ + |+.|++++|.+.+..|..+.
T Consensus 117 ~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~- 195 (844)
T 3j0a_A 117 GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWG- 195 (844)
T ss_dssp CCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCC-
T ss_pred ccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchh-
Confidence 8888999999999998886544 578888999999999998888777777766 4 77777777777766555443
Q ss_pred cCCC------CcEeeecccc-c--------------cccccc--------------------------CcccccEEEccc
Q 039925 200 TLPK------GRNYYILLLA-Q--------------KLYWSD--------------------------VSTTATIIAMGG 232 (549)
Q Consensus 200 ~l~~------L~~L~l~~~~-~--------------~l~~l~--------------------------~~~~L~~L~l~~ 232 (549)
.+++ |+.|+++.+. . .+..+. ..++|+.|++++
T Consensus 196 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~ 275 (844)
T 3j0a_A 196 KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSH 275 (844)
T ss_dssp SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTT
T ss_pred hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCC
Confidence 3332 6666666420 0 000000 013566666666
Q ss_pred cccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCc
Q 039925 233 NQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNK 312 (549)
Q Consensus 233 n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 312 (549)
|.+.+..+..+..+ ++|+.|+|++|.+++.. |..|..+++|++|+|++|.+++..|..|..+++|+.|++++|+
T Consensus 276 n~l~~~~~~~~~~l--~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 349 (844)
T 3j0a_A 276 GFVFSLNSRVFETL--KDLKVLNLAYNKINKIA----DEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNH 349 (844)
T ss_dssp CCCCEECSCCSSSC--CCCCEEEEESCCCCEEC----TTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCC
T ss_pred CcccccChhhhhcC--CCCCEEECCCCcCCCCC----hHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCC
Confidence 66665555555555 56666666666655433 3345555555555555555554445555555555555555555
Q ss_pred ccc
Q 039925 313 LSA 315 (549)
Q Consensus 313 l~~ 315 (549)
+++
T Consensus 350 i~~ 352 (844)
T 3j0a_A 350 IAI 352 (844)
T ss_dssp CCC
T ss_pred CCc
Confidence 544
No 33
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=1.4e-28 Score=270.07 Aligned_cols=274 Identities=18% Similarity=0.153 Sum_probs=173.3
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccce
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTK 110 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~ 110 (549)
|.+..|.|+.. +++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+.++++| ++
T Consensus 4 ~~~~~~~cs~~--~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~ 77 (680)
T 1ziw_A 4 VSHEVADCSHL--KLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML-KV 77 (680)
T ss_dssp CBSSEEECCSS--CCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTC-CE
T ss_pred eECCeeECCCC--Ccc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCc-CE
Confidence 44555667542 222 4554443 466666666666664444456666666666666666665556666666666 66
Q ss_pred eeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcC
Q 039925 111 LFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSF 189 (549)
Q Consensus 111 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l 189 (549)
|++++|.++...+..|+++++|++|++++|.+++..|..|.++++|++|++++|.+.+..|..+..++ |++|++++|.+
T Consensus 78 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 157 (680)
T 1ziw_A 78 LNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI 157 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcc
Confidence 66666666655445566666666666666666655455666666666666666666665566666666 66666666666
Q ss_pred cccCchhhh-hcCCCCcEeeeccc-cc-----------cccccc------------------CcccccEEEccccccccc
Q 039925 190 TGNLPLEIG-VTLPKGRNYYILLL-AQ-----------KLYWSD------------------VSTTATIIAMGGNQISGT 238 (549)
Q Consensus 190 ~~~~p~~~~-~~l~~L~~L~l~~~-~~-----------~l~~l~------------------~~~~L~~L~l~~n~l~~~ 238 (549)
++..+..+. ..+++|+.|+++.+ +. .+..+. ..++|+.|++++|.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~ 237 (680)
T 1ziw_A 158 QALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 237 (680)
T ss_dssp CCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEE
T ss_pred cccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCccccc
Confidence 644443332 13456666666541 11 110000 114688888888888887
Q ss_pred cChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccc
Q 039925 239 ITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 239 ~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
.|..+..+..++|+.|++++|.+++.. |..+..+++|++|++++|++.+..|..|..+++|+.|++++|...
T Consensus 238 ~~~~~~~l~~~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~ 309 (680)
T 1ziw_A 238 SNTTFLGLKWTNLTMLDLSYNNLNVVG----NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309 (680)
T ss_dssp CTTTTGGGGGSCCCEEECTTSCCCEEC----TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCC
T ss_pred ChhHhhccCcCCCCEEECCCCCcCccC----cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhh
Confidence 777777762233888888888887544 456778888888888888888777777777788888887776544
No 34
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=1.2e-28 Score=264.33 Aligned_cols=293 Identities=15% Similarity=0.121 Sum_probs=233.9
Q ss_pred eEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccc-cc
Q 039925 45 INKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQ-LL 123 (549)
Q Consensus 45 v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~-~~ 123 (549)
+.+..|..|.++++|++|+|++|.+++..|+.|.++++|++|+|++|+++ .+|.. .+++| ++|++++|++++. .|
T Consensus 64 i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L-~~L~Ls~N~l~~l~~p 139 (562)
T 3a79_B 64 ISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASL-RHLDLSFNDFDVLPVC 139 (562)
T ss_dssp CCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTC-SEEECCSSCCSBCCCC
T ss_pred ccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccC-CEEECCCCCccccCch
Confidence 33444568999999999999999999888999999999999999999999 78876 89999 9999999999874 46
Q ss_pred cccCCCCCCCEEEeecceeeeeCCccccCCCCC--CEEecccCcc--eecccccccc-----------------------
Q 039925 124 DFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSL--FYDNINRNEF--SGLIPSFIFN----------------------- 176 (549)
Q Consensus 124 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~~~~----------------------- 176 (549)
..|+++++|++|++++|.+++ ..+..+++| ++|++++|.+ ++..|..+..
T Consensus 140 ~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~ 216 (562)
T 3a79_B 140 KEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMS 216 (562)
T ss_dssp GGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEE
T ss_pred HhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhc
Confidence 899999999999999999985 345666666 9999999988 5555444332
Q ss_pred ---c--------------------------------------------------------ccceeeCCCCcCcccCchhh
Q 039925 177 ---I--------------------------------------------------------SLKWNFLPENSFTGNLPLEI 197 (549)
Q Consensus 177 ---l--------------------------------------------------------~L~~L~l~~n~l~~~~p~~~ 197 (549)
+ .|++|++++|.+++.+|..+
T Consensus 217 ~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~ 296 (562)
T 3a79_B 217 VNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREE 296 (562)
T ss_dssp ESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCC
T ss_pred ccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchh
Confidence 1 25566666676766666544
Q ss_pred h----------------------------------------------------hcCCCCcEeeeccc-ccc--cccccCc
Q 039925 198 G----------------------------------------------------VTLPKGRNYYILLL-AQK--LYWSDVS 222 (549)
Q Consensus 198 ~----------------------------------------------------~~l~~L~~L~l~~~-~~~--l~~l~~~ 222 (549)
+ ..+++|++|+++++ +.. ...+...
T Consensus 297 ~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 376 (562)
T 3a79_B 297 FTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTL 376 (562)
T ss_dssp CCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSC
T ss_pred hhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhccc
Confidence 1 35678888888873 333 2234456
Q ss_pred ccccEEEcccccccc--ccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCC
Q 039925 223 TTATIIAMGGNQISG--TITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYY 300 (549)
Q Consensus 223 ~~L~~L~l~~n~l~~--~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 300 (549)
++|+.|++++|++++ .+|..+..+ ++|+.|++++|.+++.+| +..+..+++|++|++++|++++.+|..+.
T Consensus 377 ~~L~~L~L~~N~l~~~~~~~~~~~~l--~~L~~L~l~~N~l~~~~~---~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-- 449 (562)
T 3a79_B 377 KRLQTLILQRNGLKNFFKVALMTKNM--SSLETLDVSLNSLNSHAY---DRTCAWAESILVLNLSSNMLTGSVFRCLP-- 449 (562)
T ss_dssp SSCCEEECCSSCCCBTTHHHHTTTTC--TTCCEEECTTSCCBSCCS---SCCCCCCTTCCEEECCSSCCCGGGGSSCC--
T ss_pred CCCCEEECCCCCcCCcccchhhhcCC--CCCCEEECCCCcCCCccC---hhhhcCcccCCEEECCCCCCCcchhhhhc--
Confidence 799999999999997 345678888 999999999999997675 34688899999999999999977776554
Q ss_pred CCCCEEEccCCcccccCCCC----------CCCCCCCcccCCcc---cccccceeeecCCCCCCCC
Q 039925 301 QNLMELSVSRNKLSASLPPL----------NSQHNHSFSCPGFE---FSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 301 ~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~~~---~~~l~l~~~~~gn~~~c~~ 353 (549)
++|+.|++++|+++ .+|.. ++++|++..+|... +..+.. +.+.+||+.|..
T Consensus 450 ~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~-L~l~~N~~~c~c 513 (562)
T 3a79_B 450 PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQY-IWLHDNPWDCTC 513 (562)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCC-EECCSCCBCCCH
T ss_pred CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCE-EEecCCCcCCCc
Confidence 79999999999999 46653 89999999999984 333333 789999999853
No 35
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=4.3e-28 Score=262.49 Aligned_cols=163 Identities=13% Similarity=0.129 Sum_probs=141.8
Q ss_pred CCCCC----CcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccc
Q 039925 29 DLCQW----RGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHC 104 (549)
Q Consensus 29 ~~c~w----~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l 104 (549)
++|.+ ..|.|+. .+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++
T Consensus 5 ~~c~~~~~~~~~~c~~--~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l 79 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMD--QKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGL 79 (606)
T ss_dssp -CCEEEETTTEEECTT--SCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred CCceecCCCCceEccC--CCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhch
Confidence 56765 3577754 3343 6777665 789999999999998888899999999999999999998778899999
Q ss_pred cCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCccee-cccccccccc-ccee
Q 039925 105 SNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSG-LIPSFIFNIS-LKWN 182 (549)
Q Consensus 105 ~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~-L~~L 182 (549)
++| ++|++++|.+++..|..|+++++|++|++++|.+++..+..++++++|++|++++|.+.+ .+|..+.+++ |++|
T Consensus 80 ~~L-~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 158 (606)
T 3vq2_A 80 HHL-SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHV 158 (606)
T ss_dssp TTC-CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEE
T ss_pred hhc-CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEE
Confidence 999 999999999998889999999999999999999997777889999999999999999986 5799999999 9999
Q ss_pred eCCCCcCcccCchhh
Q 039925 183 FLPENSFTGNLPLEI 197 (549)
Q Consensus 183 ~l~~n~l~~~~p~~~ 197 (549)
++++|.+++..+..+
T Consensus 159 ~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 159 DLSYNYIQTITVNDL 173 (606)
T ss_dssp ECCSSCCCEECTTTT
T ss_pred EccCCcceecChhhh
Confidence 999999886555433
No 36
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=9.3e-29 Score=264.50 Aligned_cols=152 Identities=14% Similarity=0.092 Sum_probs=134.0
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEE
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMI 136 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 136 (549)
++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++| ++|++++|.+++..|..|+++++|++|+
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL-EHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC-CEEECCCCccCccCHHHhccCCCCcEEE
Confidence 589999999999998888999999999999999999998788899999999 9999999999988888899999999999
Q ss_pred eecceeee-eCCccccCCCCCCEEecccCcceeccc-ccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec
Q 039925 137 FKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIP-SFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 137 L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~ 210 (549)
+++|.+++ ..|..+.++++|++|++++|.+.+.+| ..+..++ |++|++++|.+++..|..+. .+++|+.|+++
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~l~ 180 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLK-SIRDIHHLTLH 180 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT-TCSEEEEEEEE
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhh-ccccCceEecc
Confidence 99999986 357789999999999999998544554 6899999 99999999999987777765 55555555543
No 37
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.1e-28 Score=252.99 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=213.6
Q ss_pred CCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceee
Q 039925 33 WRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLF 112 (549)
Q Consensus 33 w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~ 112 (549)
|..|.|... +++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++| ++|+
T Consensus 56 ~~~v~c~~~--~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L~ 129 (452)
T 3zyi_A 56 FSKVVCTRR--GLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASL-NTLE 129 (452)
T ss_dssp SCEEECCSS--CCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEE
T ss_pred CcEEEECCC--CcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccC-CEEE
Confidence 567888642 333 5676554 689999999999998889999999999999999999998778899999999 9999
Q ss_pred ecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccC-cceecccccccccc-cceeeCCCCcCc
Q 039925 113 ICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRN-EFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 113 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
|++|+++...+..|..+++|++|+|++|.++...+..|.++++|++|++++| .+....+..|.+++ |++|++++|.++
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 9999999888888999999999999999999777778999999999999995 45544455788898 999999999998
Q ss_pred ccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCc
Q 039925 191 GNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIA 270 (549)
Q Consensus 191 ~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~ 270 (549)
.+|. +. ..++|+.|++++|.+++..|..|..+ ++|+.|+|++|++++.. +
T Consensus 210 -~~~~-~~----------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~----~ 259 (452)
T 3zyi_A 210 -DMPN-LT----------------------PLVGLEELEMSGNHFPEIRPGSFHGL--SSLKKLWVMNSQVSLIE----R 259 (452)
T ss_dssp -SCCC-CT----------------------TCTTCCEEECTTSCCSEECGGGGTTC--TTCCEEECTTSCCCEEC----T
T ss_pred -cccc-cc----------------------ccccccEEECcCCcCcccCcccccCc--cCCCEEEeCCCcCceEC----H
Confidence 3442 21 22479999999999999889999999 99999999999998655 5
Q ss_pred cccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 271 SSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 271 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 678999999999999999997677788999999999999999874
No 38
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=9.6e-29 Score=262.59 Aligned_cols=283 Identities=14% Similarity=0.131 Sum_probs=193.4
Q ss_pred ceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecc
Q 039925 36 VTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICE 115 (549)
Q Consensus 36 v~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~ 115 (549)
+.|+. .+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++| ++|++++
T Consensus 5 l~ls~--n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~ 78 (520)
T 2z7x_B 5 VDRSK--NGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQEL-EYLDLSH 78 (520)
T ss_dssp EECTT--SCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTC-CEEECCS
T ss_pred EecCC--CCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCC-CEEecCC
Confidence 44543 3444 5787766 899999999999997777899999999999999999998778999999999 9999999
Q ss_pred cccccccccccCCCCCCCEEEeecceeee-eCCccccCCCCCCEEecccCcceecccccccccc-c--ceeeCCCCcC--
Q 039925 116 THLSGQLLDFIGNPSAIQVMIFKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-L--KWNFLPENSF-- 189 (549)
Q Consensus 116 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L--~~L~l~~n~l-- 189 (549)
|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+.+ ..+..++ | ++|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9998 45655 89999999999999986 478999999999999999999986 3566666 6 9999999998
Q ss_pred cccCchhhhh-------------------------cCCCCcEeeecccc------------------ccccccc------
Q 039925 190 TGNLPLEIGV-------------------------TLPKGRNYYILLLA------------------QKLYWSD------ 220 (549)
Q Consensus 190 ~~~~p~~~~~-------------------------~l~~L~~L~l~~~~------------------~~l~~l~------ 220 (549)
.+..|..+.. .+++|+.|+++.+. ..++.+.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccccc
Confidence 5566655541 24455555554321 1111100
Q ss_pred ------------CcccccEEEccccccccccChhh-----hhccccCccEEEcCCCcccccCCC-c--------------
Q 039925 221 ------------VSTTATIIAMGGNQISGTITLGI-----KKLIFVNLYALTMVKNKLSGPIPH-H-------------- 268 (549)
Q Consensus 221 ------------~~~~L~~L~l~~n~l~~~~~~~~-----~~l~~~~L~~L~L~~n~l~~~~p~-~-------------- 268 (549)
..++|+.|++++|.+.+.+|..+ ..+ ++|+.+++++|.+ .+|. .
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l--~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~ 308 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSL--KALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFT 308 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCC--CEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccC--ceeEeccccccce--ecchhhhhcccccCceeEEE
Confidence 01267777777777776666655 344 4444444444333 1110 0
Q ss_pred -----C-ccc-cCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc--cCCC-------C---CCCCCCCcc
Q 039925 269 -----I-ASS-LGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA--SLPP-------L---NSQHNHSFS 329 (549)
Q Consensus 269 -----l-~~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~-------~---~ls~N~~~~ 329 (549)
+ +.. +..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|. . ++++|++..
T Consensus 309 l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 309 VSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp EESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred cCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 0 000 1455666666666666665566666666666666666666654 2221 1 666666555
Q ss_pred -cCCcc
Q 039925 330 -CPGFE 334 (549)
Q Consensus 330 -ip~~~ 334 (549)
+|...
T Consensus 389 ~l~~~~ 394 (520)
T 2z7x_B 389 DEKKGD 394 (520)
T ss_dssp CGGGCS
T ss_pred ccccch
Confidence 65543
No 39
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=6.8e-28 Score=250.40 Aligned_cols=247 Identities=17% Similarity=0.199 Sum_probs=213.6
Q ss_pred CCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceee
Q 039925 33 WRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLF 112 (549)
Q Consensus 33 w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~ 112 (549)
|..|.|... +++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++| ++|+
T Consensus 45 ~~~v~c~~~--~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L-~~L~ 118 (440)
T 3zyj_A 45 FSKVICVRK--NLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL-NTLE 118 (440)
T ss_dssp SCEEECCSC--CCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSC-CEEE
T ss_pred CCEEEeCCC--CcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccC-CEEE
Confidence 567778642 333 6777665 689999999999998888899999999999999999997777889999999 9999
Q ss_pred ecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCc-ceecccccccccc-cceeeCCCCcCc
Q 039925 113 ICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNE-FSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 113 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
|++|+++...+..|..+++|++|+|++|.++...+..|.++++|++|++++|. +....+..|.+++ |++|++++|.++
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 99999998878889999999999999999997777889999999999999954 4444455788999 999999999998
Q ss_pred ccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCc
Q 039925 191 GNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIA 270 (549)
Q Consensus 191 ~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~ 270 (549)
.+|. +. ..++|+.|++++|.+++..|..|..+ ++|+.|+|++|++++.. +
T Consensus 199 -~~~~-~~----------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~----~ 248 (440)
T 3zyj_A 199 -EIPN-LT----------------------PLIKLDELDLSGNHLSAIRPGSFQGL--MHLQKLWMIQSQIQVIE----R 248 (440)
T ss_dssp -SCCC-CT----------------------TCSSCCEEECTTSCCCEECTTTTTTC--TTCCEEECTTCCCCEEC----T
T ss_pred -cccc-cC----------------------CCcccCEEECCCCccCccChhhhccC--ccCCEEECCCCceeEEC----h
Confidence 5552 11 22479999999999999889999999 99999999999998655 5
Q ss_pred cccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 271 SSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 271 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 678999999999999999997777788999999999999999874
No 40
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=4.3e-27 Score=252.74 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=138.6
Q ss_pred cceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeec
Q 039925 35 GVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFIC 114 (549)
Q Consensus 35 gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls 114 (549)
-+.|.. .+++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++| ++|+++
T Consensus 11 ~~~c~~--~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L-~~L~L~ 84 (570)
T 2z63_A 11 TYQCME--LNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL-STLILT 84 (570)
T ss_dssp EEECCS--SCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTC-CEEECT
T ss_pred EEEeCC--CCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhC-CEEeCc
Confidence 366754 2333 5666553 579999999999998778899999999999999999997777889999999 999999
Q ss_pred ccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCccee-cccccccccc-cceeeCCCCcCccc
Q 039925 115 ETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSG-LIPSFIFNIS-LKWNFLPENSFTGN 192 (549)
Q Consensus 115 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~-L~~L~l~~n~l~~~ 192 (549)
+|.+++..|..|+++++|++|++++|.+++..+..++++++|++|++++|.+.+ .+|..|.+++ |++|++++|.+++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 999998888999999999999999999996555579999999999999999987 4799999999 99999999999865
Q ss_pred CchhhhhcCCCC
Q 039925 193 LPLEIGVTLPKG 204 (549)
Q Consensus 193 ~p~~~~~~l~~L 204 (549)
.+..+. .+++|
T Consensus 165 ~~~~~~-~l~~L 175 (570)
T 2z63_A 165 YCTDLR-VLHQM 175 (570)
T ss_dssp CGGGGH-HHHTC
T ss_pred cHHHcc-chhcc
Confidence 555443 34333
No 41
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.1e-26 Score=233.56 Aligned_cols=271 Identities=20% Similarity=0.285 Sum_probs=192.6
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
.+..+++|++|++++|.++ .++. |..+++|++|++++|.++. +| .+..+++| ++|++++|.+++..+ +..+++
T Consensus 61 ~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L-~~L~l~~n~i~~~~~--~~~l~~ 133 (347)
T 4fmz_A 61 GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL-RELYLNEDNISDISP--LANLTK 133 (347)
T ss_dssp TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC-SEEECTTSCCCCCGG--GTTCTT
T ss_pred hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC-CEEECcCCcccCchh--hccCCc
Confidence 4777888888888888888 4444 8888888888888888873 44 57888888 888888888875433 778888
Q ss_pred CCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec
Q 039925 132 IQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~ 210 (549)
|++|++++|.....+ ..+..+++|++|++++|.+.+..+ +..++ |++|++++|.+. .++. +. .+++|+.|+++
T Consensus 134 L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~-~~~~-~~-~l~~L~~L~l~ 207 (347)
T 4fmz_A 134 MYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE-DISP-LA-SLTSLHYFTAY 207 (347)
T ss_dssp CCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC-CCGG-GG-GCTTCCEEECC
T ss_pred eeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc-cccc-cc-CCCccceeecc
Confidence 888888888655333 347888888888888888774433 67777 888888888887 3443 43 78888888887
Q ss_pred c-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccc
Q 039925 211 L-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKL 289 (549)
Q Consensus 211 ~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l 289 (549)
. .+.....+...++|+.|++++|.+++..+ +..+ ++|+.|++++|.+++ + ..+..+++|++|++++|++
T Consensus 208 ~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l--~~L~~L~l~~n~l~~-~-----~~~~~l~~L~~L~l~~n~l 277 (347)
T 4fmz_A 208 VNQITDITPVANMTRLNSLKIGNNKITDLSP--LANL--SQLTWLEIGTNQISD-I-----NAVKDLTKLKMLNVGSNQI 277 (347)
T ss_dssp SSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTC--TTCCEEECCSSCCCC-C-----GGGTTCTTCCEEECCSSCC
T ss_pred cCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcC--CCCCEEECCCCccCC-C-----hhHhcCCCcCEEEccCCcc
Confidence 6 33444434555678888888888875443 6677 888888888887763 2 3467788888888888888
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCCCC----------CCCCCCCcccCCcc-cccccceeeecCCC
Q 039925 290 QGNLPSSLGYYQNLMELSVSRNKLSASLPPL----------NSQHNHSFSCPGFE-FSVIKLEFQIPGNK 348 (549)
Q Consensus 290 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~ls~N~~~~ip~~~-~~~l~l~~~~~gn~ 348 (549)
++ + +.+..+++|+.|++++|++++..|.. ++++|++..+++.. +..+.. +++.+|+
T Consensus 278 ~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~-L~l~~N~ 344 (347)
T 4fmz_A 278 SD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDS-ADFANQV 344 (347)
T ss_dssp CC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSE-ESSSCC-
T ss_pred CC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccce-eehhhhc
Confidence 74 3 45777888888888888877544322 67777766665511 333332 5555654
No 42
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.3e-29 Score=246.55 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=161.6
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeeccccccc-ccCCcccc-------cccCccceeeeccccccccccc
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFS-GKIPANLS-------HCSNLLTKLFICETHLSGQLLD 124 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~p~~l~-------~l~~L~~~L~Ls~n~l~~~~~~ 124 (549)
++..++|+.|++++|.+ .+|..+... |++|+|++|.+. ..+|..+. .+++| ++|++++|.+++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGL-QELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCC-CEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCc-cEEEccCCcccchhHH
Confidence 34455667777777777 566655543 677777777763 34555544 56677 7777777777766666
Q ss_pred cc--CCCCCCCEEEeecceeeeeCCccccCC-----CCCCEEecccCcceecccccccccc-cceeeCCCCcCccc--Cc
Q 039925 125 FI--GNPSAIQVMIFKENSLEGKFPNTLSNL-----RSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGN--LP 194 (549)
Q Consensus 125 ~~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~--~p 194 (549)
.+ ..+++|++|+|++|++++. |..+..+ ++|++|++++|++.+..|..|..++ |++|++++|++.+. ++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 54 6677777777777777644 6666555 6777777777777766666677776 77777777776544 22
Q ss_pred hhh-hhcCCCCcEeeecc-cccccc-----cccCcccccEEEccccccccccC-hhhhhccccCccEEEcCCCcccccCC
Q 039925 195 LEI-GVTLPKGRNYYILL-LAQKLY-----WSDVSTTATIIAMGGNQISGTIT-LGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 195 ~~~-~~~l~~L~~L~l~~-~~~~l~-----~l~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
..+ ...+++|++|++++ .+..+. .+...++|+.|++++|.+++..| ..+..+ ++|+.|+|++|.++ .+|
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l--~~L~~L~Ls~N~l~-~ip 269 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP--SQLNSLNLSFTGLK-QVP 269 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC--TTCCEEECTTSCCS-SCC
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc--CCCCEEECCCCccC-hhh
Confidence 232 12566666666655 222111 11123478888888888887664 345556 78888888888887 553
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
..+. ++|++|+|++|++++. |. +..+++|+.|++++|++++
T Consensus 270 ----~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 270 ----KGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp ----SSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred ----hhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 3443 7888888888888854 65 7888888888888888875
No 43
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.7e-26 Score=240.67 Aligned_cols=251 Identities=16% Similarity=0.118 Sum_probs=206.9
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEe
Q 039925 58 YLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIF 137 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 137 (549)
....++.+++.++ .+|..+. ++|++|+|++|+|++..|..|..+++| ++|+|++|.+++..+..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L-~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHL-EVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCC-CEEECCCCccCCcChhhccCcccCCEEEC
Confidence 3467888888888 7887664 689999999999998778899999999 99999999999888899999999999999
Q ss_pred ecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccc
Q 039925 138 KENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKL 216 (549)
Q Consensus 138 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l 216 (549)
++|.++...+..|..+++|++|+|++|.+....+..|..++ |++|++++|...+.++...+..+
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l--------------- 195 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGL--------------- 195 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC---------------
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCC---------------
Confidence 99999976667799999999999999999977777889999 99999999655446665433233
Q ss_pred ccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCcc
Q 039925 217 YWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSS 296 (549)
Q Consensus 217 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 296 (549)
++|+.|++++|.+++. | .+..+ ++|+.|+|++|.+++.. |..|..+++|+.|+|++|++++..+..
T Consensus 196 ------~~L~~L~L~~n~l~~~-~-~~~~l--~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~ 261 (452)
T 3zyi_A 196 ------FNLKYLNLGMCNIKDM-P-NLTPL--VGLEELEMSGNHFPEIR----PGSFHGLSSLKKLWVMNSQVSLIERNA 261 (452)
T ss_dssp ------TTCCEEECTTSCCSSC-C-CCTTC--TTCCEEECTTSCCSEEC----GGGGTTCTTCCEEECTTSCCCEECTTT
T ss_pred ------CCCCEEECCCCccccc-c-ccccc--ccccEEECcCCcCcccC----cccccCccCCCEEEeCCCcCceECHHH
Confidence 3688889999999854 3 47777 99999999999998655 678999999999999999999888999
Q ss_pred ccCCCCCCEEEccCCcccccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCCC
Q 039925 297 LGYYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 297 l~~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~ 353 (549)
|..+++|+.|+|++|++++..+.. +.. +..+.. +.+.+||+.|..
T Consensus 262 ~~~l~~L~~L~L~~N~l~~~~~~~-~~~----------l~~L~~-L~L~~Np~~CdC 306 (452)
T 3zyi_A 262 FDGLASLVELNLAHNNLSSLPHDL-FTP----------LRYLVE-LHLHHNPWNCDC 306 (452)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTS-STT----------CTTCCE-EECCSSCEECST
T ss_pred hcCCCCCCEEECCCCcCCccChHH-hcc----------ccCCCE-EEccCCCcCCCC
Confidence 999999999999999998533221 110 122222 778899998864
No 44
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.94 E-value=2e-26 Score=230.01 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=190.3
Q ss_pred eEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccc
Q 039925 45 INKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLD 124 (549)
Q Consensus 45 v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~ 124 (549)
+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++| ++|++++|.+++..+.
T Consensus 64 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L-~~L~l~~n~l~~~~~~ 139 (330)
T 1xku_A 64 ITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTL-QELRVHENEITKVRKS 139 (330)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTC-CEEECCSSCCCBBCHH
T ss_pred CCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccc-cEEECCCCcccccCHh
Confidence 33333458999999999999999999777999999999999999999999 7887665 788 9999999999988888
Q ss_pred ccCCCCCCCEEEeecceeee--eCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcC
Q 039925 125 FIGNPSAIQVMIFKENSLEG--KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTL 201 (549)
Q Consensus 125 ~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l 201 (549)
.|.++++|++|++++|.+.. ..+..+..+++|++|++++|.+.. +|..+. + |++|++++|.+++..|..+. .+
T Consensus 140 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~-~l 215 (330)
T 1xku_A 140 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLK-GL 215 (330)
T ss_dssp HHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGT-TC
T ss_pred HhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhc-CC
Confidence 89999999999999999964 678889999999999999999984 555443 5 99999999999966666655 44
Q ss_pred CCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCe
Q 039925 202 PKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTY 281 (549)
Q Consensus 202 ~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~ 281 (549)
+ +|+.|++++|.+++..+..+..+ ++|+.|++++|.++ .+ |..+..+++|++
T Consensus 216 ~---------------------~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~-~l----p~~l~~l~~L~~ 267 (330)
T 1xku_A 216 N---------------------NLAKLGLSFNSISAVDNGSLANT--PHLRELHLNNNKLV-KV----PGGLADHKYIQV 267 (330)
T ss_dssp T---------------------TCCEEECCSSCCCEECTTTGGGS--TTCCEEECCSSCCS-SC----CTTTTTCSSCCE
T ss_pred C---------------------CCCEEECCCCcCceeChhhccCC--CCCCEEECCCCcCc-cC----ChhhccCCCcCE
Confidence 3 57777777888877666677777 78888888888877 33 566777888888
Q ss_pred eeccCccccccCCccccC------CCCCCEEEccCCccc
Q 039925 282 LALDNNKLQGNLPSSLGY------YQNLMELSVSRNKLS 314 (549)
Q Consensus 282 L~Ls~N~l~~~~p~~l~~------l~~L~~L~Ls~N~l~ 314 (549)
|++++|++++..+..|.. .+.|+.|++++|.+.
T Consensus 268 L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 268 VYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp EECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred EECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 888888887555555533 367778888888775
No 45
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=2.8e-26 Score=230.54 Aligned_cols=257 Identities=23% Similarity=0.291 Sum_probs=213.6
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+|. +.++++|++|++++|.++ .++ .|..+++|++|++++|.++ .++. +..+++| ++|++++|.....++. +.
T Consensus 80 ~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~~L~l~~n~i~-~~~~-~~~l~~L-~~L~l~~n~~~~~~~~-~~ 152 (347)
T 4fmz_A 80 DISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYLNEDNIS-DISP-LANLTKM-YSLNLGANHNLSDLSP-LS 152 (347)
T ss_dssp CCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECTTSCCC-CCGG-GTTCTTC-CEEECTTCTTCCCCGG-GT
T ss_pred cchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCCEEECcCCccc-Cchh-hccCCce-eEEECCCCCCcccccc-hh
Confidence 4555 899999999999999998 454 6999999999999999999 4555 8899999 9999999976655444 89
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcE
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRN 206 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 206 (549)
.+++|++|++++|.+.+. +. +..+++|++|++++|.+.+..+ +..++ |+.|++++|.+++..+ +. .+++|+.
T Consensus 153 ~l~~L~~L~l~~~~~~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~-~~~~L~~ 225 (347)
T 4fmz_A 153 NMTGLNYLTVTESKVKDV-TP-IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VA-NMTRLNS 225 (347)
T ss_dssp TCTTCCEEECCSSCCCCC-GG-GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GG-GCTTCCE
T ss_pred hCCCCcEEEecCCCcCCc-hh-hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hh-cCCcCCE
Confidence 999999999999999844 33 8899999999999999985433 77888 9999999999984433 44 8999999
Q ss_pred eeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeecc
Q 039925 207 YYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALD 285 (549)
Q Consensus 207 L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls 285 (549)
|++++ .+..+..+...++|+.|++++|.+++. ..+..+ ++|+.|++++|.+++ + ..+..+++|++|+++
T Consensus 226 L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l--~~L~~L~l~~n~l~~-~-----~~~~~l~~L~~L~L~ 295 (347)
T 4fmz_A 226 LKIGNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDL--TKLKMLNVGSNQISD-I-----SVLNNLSQLNSLFLN 295 (347)
T ss_dssp EECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTC--TTCCEEECCSSCCCC-C-----GGGGGCTTCSEEECC
T ss_pred EEccCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcC--CCcCEEEccCCccCC-C-----hhhcCCCCCCEEECc
Confidence 99988 455555566677999999999999864 467888 999999999999884 2 357889999999999
Q ss_pred CccccccCCccccCCCCCCEEEccCCcccccCCCC--------CCCCCCCc
Q 039925 286 NNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL--------NSQHNHSF 328 (549)
Q Consensus 286 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--------~ls~N~~~ 328 (549)
+|++++..|..+..+++|+.|++++|++++..|-. ++++|++.
T Consensus 296 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 296 NNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp SSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred CCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 99999888888999999999999999999866522 77777643
No 46
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=8.6e-27 Score=232.08 Aligned_cols=222 Identities=18% Similarity=0.169 Sum_probs=196.0
Q ss_pred CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCE
Q 039925 79 RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFY 158 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 158 (549)
..++++.|+|++|.++ .+|..++.+++| ++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+.++++|++
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L-~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHL-QHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTC-SEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCC-CEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 3578999999999999 899999999999 99999999999 88999999999999999999999 88999999999999
Q ss_pred EecccCcceecccccccc---------cc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEE
Q 039925 159 DNINRNEFSGLIPSFIFN---------IS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATII 228 (549)
Q Consensus 159 L~L~~n~l~~~~p~~~~~---------l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L 228 (549)
|++++|.+.+.+|..+.. ++ |++|++++|.++ .+|..+. .++ +|+.|
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~-~l~---------------------~L~~L 211 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA-NLQ---------------------NLKSL 211 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG-GCT---------------------TCCEE
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc-CCC---------------------CCCEE
Confidence 999999998888887654 88 999999999998 8887765 333 68888
Q ss_pred EccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEc
Q 039925 229 AMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSV 308 (549)
Q Consensus 229 ~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 308 (549)
++++|.+++ +|..+..+ ++|+.|++++|.+.+.+ |..+..+++|++|+|++|.+.+.+|..+..+++|+.|+|
T Consensus 212 ~L~~N~l~~-l~~~l~~l--~~L~~L~Ls~n~~~~~~----p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 212 KIRNSPLSA-LGPAIHHL--PKLEELDLRGCTALRNY----PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp EEESSCCCC-CCGGGGGC--TTCCEEECTTCTTCCBC----CCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred EccCCCCCc-CchhhccC--CCCCEEECcCCcchhhh----HHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 999999995 66678999 99999999999998877 578899999999999999999999999999999999999
Q ss_pred cCCcccccCCCC--CCCCCCCcccCCcc
Q 039925 309 SRNKLSASLPPL--NSQHNHSFSCPGFE 334 (549)
Q Consensus 309 s~N~l~~~~p~~--~ls~N~~~~ip~~~ 334 (549)
++|++.+.+|.. .+..+..-.+|...
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHH
Confidence 999999988875 45554444444433
No 47
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=3.8e-26 Score=248.30 Aligned_cols=300 Identities=19% Similarity=0.148 Sum_probs=229.1
Q ss_pred ec-CccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccccc
Q 039925 48 CL-TPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 48 ~l-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
.+ |.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++| ++|+|++|++++..+..|
T Consensus 66 ~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L-~~L~Ls~N~l~~l~~~~~ 144 (635)
T 4g8a_A 66 HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL-QKLVAVETNLASLENFPI 144 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTC-CEEECTTSCCCCSTTCCC
T ss_pred CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCC-CEEECCCCcCCCCChhhh
Confidence 45 4589999999999999999997777889999999999999999996556678999999 999999999998888889
Q ss_pred CCCCCCCEEEeecceeee-eCCccccCCCCCCEEecccCcceecccccccccc-----cceeeCCCCcCcccCc------
Q 039925 127 GNPSAIQVMIFKENSLEG-KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-----LKWNFLPENSFTGNLP------ 194 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-----L~~L~l~~n~l~~~~p------ 194 (549)
+++++|++|+|++|.++. ..|..+..+++|++|++++|++.+..+..+..+. ...++++.|.+....+
T Consensus 145 ~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~ 224 (635)
T 4g8a_A 145 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 224 (635)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC
T ss_pred hcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccch
Confidence 999999999999999975 4678889999999999999988766555443221 1122222222110000
Q ss_pred -----------------h--------------------------------------------------------------
Q 039925 195 -----------------L-------------------------------------------------------------- 195 (549)
Q Consensus 195 -----------------~-------------------------------------------------------------- 195 (549)
.
T Consensus 225 ~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 304 (635)
T 4g8a_A 225 RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNC 304 (635)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGG
T ss_pred hhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhh
Confidence 0
Q ss_pred ------------------hhh------------------------------------------hcCCCCcEeeecc----
Q 039925 196 ------------------EIG------------------------------------------VTLPKGRNYYILL---- 211 (549)
Q Consensus 196 ------------------~~~------------------------------------------~~l~~L~~L~l~~---- 211 (549)
.+. ..+++|+.|+++.
T Consensus 305 ~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~ 384 (635)
T 4g8a_A 305 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLS 384 (635)
T ss_dssp GTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCB
T ss_pred hcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccc
Confidence 000 0123344443332
Q ss_pred ---------------------------------cccccc----------------cccCcccccEEEccccccccccChh
Q 039925 212 ---------------------------------LAQKLY----------------WSDVSTTATIIAMGGNQISGTITLG 242 (549)
Q Consensus 212 ---------------------------------~~~~l~----------------~l~~~~~L~~L~l~~n~l~~~~~~~ 242 (549)
.+..+. .+....+++.++++.|.+.+..+..
T Consensus 385 ~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~ 464 (635)
T 4g8a_A 385 FKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 464 (635)
T ss_dssp EEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred cccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccc
Confidence 111221 1223458899999999999888888
Q ss_pred hhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC--
Q 039925 243 IKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL-- 320 (549)
Q Consensus 243 ~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-- 320 (549)
+..+ +.|+.|++++|.+...++ |..+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..|..
T Consensus 465 ~~~~--~~L~~L~Ls~N~~~~~~~---~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 539 (635)
T 4g8a_A 465 FNGL--SSLEVLKMAGNSFQENFL---PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 539 (635)
T ss_dssp TTTC--TTCCEEECTTCEEGGGEE---CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGT
T ss_pred cccc--hhhhhhhhhhcccccccC---chhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHh
Confidence 8888 999999999998654432 677899999999999999999888999999999999999999999765543
Q ss_pred --------CCCCCCCcccCCcccccc--cce-eeecCCCCCCCC
Q 039925 321 --------NSQHNHSFSCPGFEFSVI--KLE-FQIPGNKKLCGG 353 (549)
Q Consensus 321 --------~ls~N~~~~ip~~~~~~l--~l~-~~~~gn~~~c~~ 353 (549)
++++|++..+++..+..+ .++ +++.+||+.|..
T Consensus 540 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 540 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp TCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 899999988887765433 232 789999999964
No 48
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.94 E-value=2.7e-26 Score=229.19 Aligned_cols=233 Identities=22% Similarity=0.246 Sum_probs=171.4
Q ss_pred eEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccc
Q 039925 45 INKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLD 124 (549)
Q Consensus 45 v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~ 124 (549)
+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++| ++|++++|.++...+.
T Consensus 66 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L-~~L~l~~n~i~~~~~~ 141 (332)
T 2ft3_A 66 ISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSL-VELRIHDNRIRKVPKG 141 (332)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTC-CEEECCSSCCCCCCSG
T ss_pred CCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccC-CEEECCCCccCccCHh
Confidence 44444668999999999999999999888999999999999999999999 7887765 788 9999999999987778
Q ss_pred ccCCCCCCCEEEeecceeee--eCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcC
Q 039925 125 FIGNPSAIQVMIFKENSLEG--KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTL 201 (549)
Q Consensus 125 ~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l 201 (549)
.|.++++|++|++++|.++. ..+..+..+ +|++|++++|++++ +|..+. + |++|++++|.+++..+..+. .+
T Consensus 142 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~-~l 216 (332)
T 2ft3_A 142 VFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLL-RY 216 (332)
T ss_dssp GGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSST-TC
T ss_pred HhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhc-CC
Confidence 89999999999999999963 677888888 99999999999985 555443 5 99999999999965555555 55
Q ss_pred CCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCe
Q 039925 202 PKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTY 281 (549)
Q Consensus 202 ~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~ 281 (549)
++ |+.|++++|.+.+..+..+..+ ++|+.|++++|+++ .+ |..+..+++|++
T Consensus 217 ~~---------------------L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~-~l----p~~l~~l~~L~~ 268 (332)
T 2ft3_A 217 SK---------------------LYRLGLGHNQIRMIENGSLSFL--PTLRELHLDNNKLS-RV----PAGLPDLKLLQV 268 (332)
T ss_dssp TT---------------------CSCCBCCSSCCCCCCTTGGGGC--TTCCEEECCSSCCC-BC----CTTGGGCTTCCE
T ss_pred CC---------------------CCEEECCCCcCCcCChhHhhCC--CCCCEEECCCCcCe-ec----ChhhhcCccCCE
Confidence 55 4455555555555444455555 55555555555555 22 344555555555
Q ss_pred eeccCccccccCCccccC------CCCCCEEEccCCccc
Q 039925 282 LALDNNKLQGNLPSSLGY------YQNLMELSVSRNKLS 314 (549)
Q Consensus 282 L~Ls~N~l~~~~p~~l~~------l~~L~~L~Ls~N~l~ 314 (549)
|++++|++++..+..|.. .+.|+.|++++|.++
T Consensus 269 L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 269 VYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp EECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred EECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 555555555433333332 244555555555554
No 49
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=8.9e-26 Score=236.20 Aligned_cols=256 Identities=23% Similarity=0.288 Sum_probs=155.7
Q ss_pred cCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCC
Q 039925 49 LTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGN 128 (549)
Q Consensus 49 lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~ 128 (549)
+| .+..+++|++|+|++|.+++ +|. +.++++|++|++++|.+++ ++. +..+++| ++|++++|.+++..+ +.+
T Consensus 61 l~-~~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L-~~L~L~~n~l~~~~~--~~~ 132 (466)
T 1o6v_A 61 ID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIAD-ITP-LANLTNL-TGLTLFNNQITDIDP--LKN 132 (466)
T ss_dssp CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTC-CEEECCSSCCCCCGG--GTT
T ss_pred Cc-chhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCcccc-Chh-hcCCCCC-CEEECCCCCCCCChH--HcC
Confidence 44 36677778888888887773 343 7777778888888777774 333 7777777 777887777775433 777
Q ss_pred CCCCCEEEeecceeeeeCCc--------------------cccCCCCCCEEecccCcceecccccccccc-cceeeCCCC
Q 039925 129 PSAIQVMIFKENSLEGKFPN--------------------TLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPEN 187 (549)
Q Consensus 129 l~~L~~L~L~~n~l~~~~p~--------------------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n 187 (549)
+++|++|++++|.+.+ ++. .+.++++|++|++++|.+.+. ..+..++ |++|++++|
T Consensus 133 l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 209 (466)
T 1o6v_A 133 LTNLNRLELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 209 (466)
T ss_dssp CTTCSEEEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCC
Confidence 7777777777777763 221 245556666666666666532 2355555 666666666
Q ss_pred cCcccCchhhhhcCCCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCC
Q 039925 188 SFTGNLPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 188 ~l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
.+++..| +. .+++|+.|++++ .+..+..+...++|+.|++++|.+.+..+ +..+ ++|+.|++++|.+++.
T Consensus 210 ~l~~~~~--~~-~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l--~~L~~L~l~~n~l~~~-- 280 (466)
T 1o6v_A 210 QISDITP--LG-ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGL--TKLTELKLGANQISNI-- 280 (466)
T ss_dssp CCCCCGG--GG-GCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTC--TTCSEEECCSSCCCCC--
T ss_pred ccccccc--cc-ccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcC--CCCCEEECCCCccCcc--
Confidence 6664333 33 566666666665 33333344444566666666666665433 5555 6666666666666532
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC--------CCCCCCCccc
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL--------NSQHNHSFSC 330 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--------~ls~N~~~~i 330 (549)
+. +..+++|+.|++++|++.+..+ +..+++|+.|++++|++++..|-. ++++|++..+
T Consensus 281 ---~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 281 ---SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp ---GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred ---cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 12 5556666666666666663222 556666666666666666543311 5555555444
No 50
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=7.1e-26 Score=235.18 Aligned_cols=250 Identities=17% Similarity=0.157 Sum_probs=208.0
Q ss_pred CCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 59 LRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 59 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
.+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++| ++|+|++|.++...+..|.++++|++|+|+
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L-~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHL-EILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSC-CEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCC-CEEECCCCcCCccChhhccCCccCCEEECC
Confidence 456788888888 7887665 789999999999997777899999999 999999999998888999999999999999
Q ss_pred cceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccc
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLY 217 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~ 217 (549)
+|+++...+..|..+++|++|+|++|.+....+..|..++ |++|++++|...+.++...+..+
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l---------------- 184 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL---------------- 184 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC----------------
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc----------------
Confidence 9999966666899999999999999999987778899999 99999999665546665433233
Q ss_pred cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccc
Q 039925 218 WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSL 297 (549)
Q Consensus 218 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l 297 (549)
++|+.|++++|.++. +| .+..+ ++|+.|+|++|.+++.. |..|..+++|+.|+|++|++++..+..|
T Consensus 185 -----~~L~~L~L~~n~l~~-~~-~~~~l--~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 251 (440)
T 3zyj_A 185 -----SNLRYLNLAMCNLRE-IP-NLTPL--IKLDELDLSGNHLSAIR----PGSFQGLMHLQKLWMIQSQIQVIERNAF 251 (440)
T ss_dssp -----SSCCEEECTTSCCSS-CC-CCTTC--SSCCEEECTTSCCCEEC----TTTTTTCTTCCEEECTTCCCCEECTTSS
T ss_pred -----cccCeecCCCCcCcc-cc-ccCCC--cccCEEECCCCccCccC----hhhhccCccCCEEECCCCceeEEChhhh
Confidence 368888899999884 44 47777 99999999999998655 5788999999999999999998888999
Q ss_pred cCCCCCCEEEccCCcccccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCCC
Q 039925 298 GYYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 298 ~~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~ 353 (549)
..+++|+.|+|++|++++..+.. +.. +..+.. +.+.+||+.|..
T Consensus 252 ~~l~~L~~L~L~~N~l~~~~~~~-~~~----------l~~L~~-L~L~~Np~~CdC 295 (440)
T 3zyj_A 252 DNLQSLVEINLAHNNLTLLPHDL-FTP----------LHHLER-IHLHHNPWNCNC 295 (440)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTT-TSS----------CTTCCE-EECCSSCEECSS
T ss_pred cCCCCCCEEECCCCCCCccChhH-hcc----------ccCCCE-EEcCCCCccCCC
Confidence 99999999999999999533221 110 122222 788999999864
No 51
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=9.5e-27 Score=227.31 Aligned_cols=213 Identities=17% Similarity=0.134 Sum_probs=127.8
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccc-ccccccccc
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETH-LSGQLLDFI 126 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~-l~~~~~~~~ 126 (549)
.+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+..+++| ++|++++|. +....|..|
T Consensus 25 ~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~~l~~~~~~~~ 101 (285)
T 1ozn_A 25 AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL-EQLDLSDNAQLRSVDPATF 101 (285)
T ss_dssp SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSCTTCCCCCTTTT
T ss_pred cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCC-CEEeCCCCCCccccCHHHh
Confidence 344433 3567777777777775555666777777777777777765556666667777 777777775 555556666
Q ss_pred CCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCc
Q 039925 127 GNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGR 205 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~ 205 (549)
..+++|++|++++|.+++..|..+..+++|++|++++|.+.+..+..+..++ |++|++++|.++
T Consensus 102 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------- 166 (285)
T 1ozn_A 102 HGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS--------------- 166 (285)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------
T ss_pred cCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc---------------
Confidence 6667777777777776655566666666666666666666644444455555 555555555554
Q ss_pred EeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeecc
Q 039925 206 NYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALD 285 (549)
Q Consensus 206 ~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls 285 (549)
+..+..+..+ ++|+.|++++|.+++.. |..+..+++|++|+++
T Consensus 167 -------------------------------~~~~~~~~~l--~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 167 -------------------------------SVPERAFRGL--HSLDRLLLHQNRVAHVH----PHAFRDLGRLMTLYLF 209 (285)
T ss_dssp -------------------------------EECTTTTTTC--TTCCEEECCSSCCCEEC----TTTTTTCTTCCEEECC
T ss_pred -------------------------------ccCHHHhcCc--cccCEEECCCCcccccC----HhHccCcccccEeeCC
Confidence 3333334444 55555555555555433 3445555556666666
Q ss_pred CccccccCCccccCCCCCCEEEccCCcccc
Q 039925 286 NNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 286 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
+|++++..+..+..+++|+.|++++|+++.
T Consensus 210 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp SSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 665554333445555666666666665553
No 52
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=4.9e-26 Score=222.28 Aligned_cols=227 Identities=19% Similarity=0.232 Sum_probs=158.2
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
++++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++| ++|++++|.+++..|..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNL-TILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCC-CEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 46777777777 566543 3577788888877775555567777777 7777777777766666777777777777777
Q ss_pred ce-eeeeCCccccCCCCCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccccc
Q 039925 140 NS-LEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYW 218 (549)
Q Consensus 140 n~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~ 218 (549)
|. +....|..|..+++|++|++++|.+.+..|..+..++
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~---------------------------------------- 129 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLA---------------------------------------- 129 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT----------------------------------------
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCc----------------------------------------
Confidence 75 6544466666677777777777766654444444444
Q ss_pred ccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCcccc
Q 039925 219 SDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLG 298 (549)
Q Consensus 219 l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 298 (549)
+|++|++++|.+++..+..+..+ ++|+.|++++|++++.. +..+..+++|++|++++|.+++..|..+.
T Consensus 130 -----~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 198 (285)
T 1ozn_A 130 -----ALQYLYLQDNALQALPDDTFRDL--GNLTHLFLHGNRISSVP----ERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (285)
T ss_dssp -----TCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCCEEC----TTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred -----CCCEEECCCCcccccCHhHhccC--CCccEEECCCCcccccC----HHHhcCccccCEEECCCCcccccCHhHcc
Confidence 34445555555554444556677 89999999999998433 45688999999999999999988899999
Q ss_pred CCCCCCEEEccCCcccccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCCC
Q 039925 299 YYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 299 ~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~ 353 (549)
.+++|+.|++++|++++..+.. +.. +..+.. +.+.+|++.|..
T Consensus 199 ~l~~L~~L~l~~n~l~~~~~~~-~~~----------l~~L~~-L~l~~N~~~c~~ 241 (285)
T 1ozn_A 199 DLGRLMTLYLFANNLSALPTEA-LAP----------LRALQY-LRLNDNPWVCDC 241 (285)
T ss_dssp TCTTCCEEECCSSCCSCCCHHH-HTT----------CTTCCE-EECCSSCEECSG
T ss_pred CcccccEeeCCCCcCCcCCHHH-ccc----------CcccCE-EeccCCCccCCC
Confidence 9999999999999998633211 000 122222 667788877754
No 53
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=7e-26 Score=223.53 Aligned_cols=248 Identities=15% Similarity=0.168 Sum_probs=204.5
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCc-ccccccCccceeeecccccccc--cccccCCCCCCCEEE
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPA-NLSHCSNLLTKLFICETHLSGQ--LLDFIGNPSAIQVMI 136 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~ 136 (549)
+.++.+++.++ .+|..+. ++|++|+|++|+++ .+|. .|..+++| ++|++++|.++.. .+..+..+++|++|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQL-TKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTC-SEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccC-CEEECCCCccCcccCcccccccccccCEEE
Confidence 46888899888 7887554 68999999999999 5665 47899999 9999999999843 366777899999999
Q ss_pred eecceeeeeCCccccCCCCCCEEecccCcceeccc-ccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccccc
Q 039925 137 FKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIP-SFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQ 214 (549)
Q Consensus 137 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~ 214 (549)
+++|.++ .+|..+..+++|++|++++|.+.+..+ ..+..++ |++|++++|.+.+..+..+. .+
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l------------- 149 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN-GL------------- 149 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT-TC-------------
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc-cC-------------
Confidence 9999999 678889999999999999999986655 5788888 99999999999866665544 23
Q ss_pred ccccccCcccccEEEcccccccc-ccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccC
Q 039925 215 KLYWSDVSTTATIIAMGGNQISG-TITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNL 293 (549)
Q Consensus 215 ~l~~l~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (549)
++|+.|++++|.+.+ ..|..+..+ ++|+.|++++|.+++.. |..+..+++|++|+|++|++++..
T Consensus 150 --------~~L~~L~l~~n~l~~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 150 --------SSLEVLKMAGNSFQENFLPDIFTEL--RNLTFLDLSQCQLEQLS----PTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp --------TTCCEEECTTCEEGGGEECSCCTTC--TTCCEEECTTSCCCEEC----TTTTTTCTTCCEEECTTSCCSBCC
T ss_pred --------cCCCEEECCCCccccccchhHHhhC--cCCCEEECCCCCcCCcC----HHHhcCCCCCCEEECCCCccCccC
Confidence 378889999999987 678889999 99999999999998654 567889999999999999999777
Q ss_pred CccccCCCCCCEEEccCCcccccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCC
Q 039925 294 PSSLGYYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCG 352 (549)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~ 352 (549)
+..+..+++|+.|++++|++++..|.. +..+|+ .+.. +++.+|++.|.
T Consensus 216 ~~~~~~l~~L~~L~L~~N~l~~~~~~~------~~~~~~----~L~~-L~L~~N~~~~~ 263 (306)
T 2z66_A 216 TFPYKCLNSLQVLDYSLNHIMTSKKQE------LQHFPS----SLAF-LNLTQNDFACT 263 (306)
T ss_dssp SGGGTTCTTCCEEECTTSCCCBCSSSS------CCCCCT----TCCE-EECTTCCEECS
T ss_pred hhhccCcccCCEeECCCCCCcccCHHH------HHhhhc----cCCE-EEccCCCeecc
Confidence 778999999999999999999866543 111221 1221 67788888775
No 54
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.9e-27 Score=235.94 Aligned_cols=221 Identities=17% Similarity=0.113 Sum_probs=161.7
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
.+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++| ++|++++|.+++.. ..++
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L-~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTL-RTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTC-CEEECCSSEEEEEE-----ECTT
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCC-CEEECcCCcccccc-----CCCC
Confidence 44567789999999999997777889999999999999999985444 8899999 99999999988543 3489
Q ss_pred CCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec
Q 039925 132 IQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~ 210 (549)
|++|++++|.+++..+. .+++|++|++++|++++..+..+..++ |++|++++|.+++..+..+...+++
T Consensus 101 L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------- 170 (317)
T 3o53_A 101 IETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT------- 170 (317)
T ss_dssp CCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTT-------
T ss_pred cCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCc-------
Confidence 99999999999865543 367899999999999988788888888 9999999999996666666534554
Q ss_pred ccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCcccc
Q 039925 211 LLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQ 290 (549)
Q Consensus 211 ~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (549)
|++|++++|.+++..+ ...+ ++|+.|++++|++++ + |..+..+++|++|+|++|+++
T Consensus 171 --------------L~~L~L~~N~l~~~~~--~~~l--~~L~~L~Ls~N~l~~-l----~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 171 --------------LEHLNLQYNFIYDVKG--QVVF--AKLKTLDLSSNKLAF-M----GPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp --------------CCEEECTTSCCCEEEC--CCCC--TTCCEEECCSSCCCE-E----CGGGGGGTTCSEEECTTSCCC
T ss_pred --------------CCEEECCCCcCccccc--cccc--ccCCEEECCCCcCCc-c----hhhhcccCcccEEECcCCccc
Confidence 5555555665554311 1124 566666666666652 2 233556666666666666666
Q ss_pred ccCCccccCCCCCCEEEccCCccc
Q 039925 291 GNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 291 ~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
.+|..+..+++|+.|++++|+++
T Consensus 228 -~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 228 -LIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp -EECTTCCCCTTCCEEECTTCCCB
T ss_pred -chhhHhhcCCCCCEEEccCCCcc
Confidence 45555666666666666666665
No 55
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=2.4e-25 Score=232.92 Aligned_cols=277 Identities=22% Similarity=0.235 Sum_probs=214.5
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccc----
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLL---- 123 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~---- 123 (549)
.+|+ +.++++|++|++++|.+++. +. +.++++|++|++++|.+++ ++. +..+++| ++|++++|.+.+...
T Consensus 82 ~~~~-~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L-~~L~l~~n~l~~~~~~~~l 155 (466)
T 1o6v_A 82 DITP-LKNLTKLVDILMNNNQIADI-TP-LANLTNLTGLTLFNNQITD-IDP-LKNLTNL-NRLELSSNTISDISALSGL 155 (466)
T ss_dssp CCGG-GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTC-SEEEEEEEEECCCGGGTTC
T ss_pred Cchh-hhccccCCEEECCCCccccC-hh-hcCCCCCCEEECCCCCCCC-ChH-HcCCCCC-CEEECCCCccCCChhhccC
Confidence 4454 88999999999999999844 43 8899999999999999884 444 8888998 999999988775321
Q ss_pred ---------------cccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCC
Q 039925 124 ---------------DFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPEN 187 (549)
Q Consensus 124 ---------------~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n 187 (549)
..+.++++|++|++++|.++. + ..+..+++|++|++++|.+.+..| +..++ |++|++++|
T Consensus 156 ~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 231 (466)
T 1o6v_A 156 TSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD-I-SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGN 231 (466)
T ss_dssp TTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred CcccEeecCCcccCchhhccCCCCCEEECcCCcCCC-C-hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCC
Confidence 136678889999999999874 3 358899999999999999987655 67778 999999999
Q ss_pred cCcccCchhhhhcCCCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCC
Q 039925 188 SFTGNLPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 188 ~l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
.+++ ++ .+. .+++|+.|++++ .+..+..+...++|+.|++++|.+.+..+ +..+ ++|+.|++++|++++..
T Consensus 232 ~l~~-~~-~l~-~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l--~~L~~L~L~~n~l~~~~- 303 (466)
T 1o6v_A 232 QLKD-IG-TLA-SLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGL--TALTNLELNENQLEDIS- 303 (466)
T ss_dssp CCCC-CG-GGG-GCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTC--TTCSEEECCSSCCSCCG-
T ss_pred Cccc-ch-hhh-cCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCC--CccCeEEcCCCcccCch-
Confidence 9984 43 444 899999999988 44455445666789999999999986544 7778 89999999999988532
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC---------CCCCCCCcccCCcc-cc
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL---------NSQHNHSFSCPGFE-FS 336 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~---------~ls~N~~~~ip~~~-~~ 336 (549)
. +..+++|+.|++++|++++..| +..+++|+.|++++|++++. +.. ++++|++..+++.. +.
T Consensus 304 ----~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~~l~ 375 (466)
T 1o6v_A 304 ----P-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTPLANLT 375 (466)
T ss_dssp ----G-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGGGTTCT
T ss_pred ----h-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccchhhcCC
Confidence 2 7788999999999999986554 78899999999999998864 221 78888876665522 44
Q ss_pred cccceeeecCCCCCC
Q 039925 337 VIKLEFQIPGNKKLC 351 (549)
Q Consensus 337 ~l~l~~~~~gn~~~c 351 (549)
.+.. +.+.+|++..
T Consensus 376 ~L~~-L~l~~n~~~~ 389 (466)
T 1o6v_A 376 RITQ-LGLNDQAWTN 389 (466)
T ss_dssp TCCE-EECCCEEEEC
T ss_pred CCCE-EeccCCcccC
Confidence 4432 5666776554
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=1.8e-25 Score=232.48 Aligned_cols=236 Identities=17% Similarity=0.105 Sum_probs=122.8
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
.|..+++|++|+|++|.+++ +| ++.+++|++|++++|.+++ +| +..+++| ++|++++|++++. + ++.+++
T Consensus 59 ~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L-~~L~L~~N~l~~l-~--~~~l~~ 128 (457)
T 3bz5_A 59 GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKL-TYLNCDTNKLTKL-D--VSQNPL 128 (457)
T ss_dssp TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTC-CEEECCSSCCSCC-C--CTTCTT
T ss_pred hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcC-CEEECCCCcCCee-c--CCCCCc
Confidence 45555556666666555553 33 5555556666666655553 22 5555555 5666666555542 2 555555
Q ss_pred CCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec
Q 039925 132 IQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~ 210 (549)
|++|++++|.+++ ++ ++.+++|++|++++|...+.+ .+..++ |++|++++|++++ +| +. .+++|+.|+++
T Consensus 129 L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~-~l~~L~~L~l~ 199 (457)
T 3bz5_A 129 LTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VS-QNKLLNRLNCD 199 (457)
T ss_dssp CCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CT-TCTTCCEEECC
T ss_pred CCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cc-cCCCCCEEECc
Confidence 6666666665553 22 555555666666555433333 244555 6666666666553 33 32 55566666655
Q ss_pred c-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCcc-------ccCee
Q 039925 211 L-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLT-------LLTYL 282 (549)
Q Consensus 211 ~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~-------~L~~L 282 (549)
. .+..+. +...++|+.|++++|++++ +| +..+ ++|+.|++++|++++.. +..+..+. +|+.|
T Consensus 200 ~N~l~~~~-l~~l~~L~~L~Ls~N~l~~-ip--~~~l--~~L~~L~l~~N~l~~~~----~~~l~~L~~L~l~~n~L~~L 269 (457)
T 3bz5_A 200 TNNITKLD-LNQNIQLTFLDCSSNKLTE-ID--VTPL--TQLTYFDCSVNPLTELD----VSTLSKLTTLHCIQTDLLEI 269 (457)
T ss_dssp SSCCSCCC-CTTCTTCSEEECCSSCCSC-CC--CTTC--TTCSEEECCSSCCSCCC----CTTCTTCCEEECTTCCCSCC
T ss_pred CCcCCeec-cccCCCCCEEECcCCcccc-cC--cccc--CCCCEEEeeCCcCCCcC----HHHCCCCCEEeccCCCCCEE
Confidence 4 233322 2333456666666666654 33 4455 56666666666665422 12222222 34445
Q ss_pred eccCccccccCCccccCCCCCCEEEccCCcccccCC
Q 039925 283 ALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLP 318 (549)
Q Consensus 283 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 318 (549)
++++|.+.+.+| +..+++|+.|++++|...+.+|
T Consensus 270 ~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 270 DLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp CCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred ECCCCccCCccc--ccccccCCEEECCCCcccceec
Confidence 555554444443 3455666666666666555444
No 57
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.9e-25 Score=216.18 Aligned_cols=217 Identities=19% Similarity=0.257 Sum_probs=159.5
Q ss_pred CCCCCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCc
Q 039925 28 IDLCQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNL 107 (549)
Q Consensus 28 ~~~c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L 107 (549)
.++|.|.|+.|+.. ..++.++++++.++ .+|..+. ++|++|+|++|++++..+..|..+++|
T Consensus 2 ~~~C~~~~~~C~c~---------------~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L 63 (270)
T 2o6q_A 2 EALCKKDGGVCSCN---------------NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKL 63 (270)
T ss_dssp CCCBGGGTCSBEEE---------------TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTC
T ss_pred CccCCCCCCCCEeC---------------CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCC
Confidence 47899999998642 24578999999999 6787654 679999999999986555678889999
Q ss_pred cceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCC
Q 039925 108 LTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPE 186 (549)
Q Consensus 108 ~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~ 186 (549)
++|++++|.++...+..|.++++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..++ |++|++++
T Consensus 64 -~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 142 (270)
T 2o6q_A 64 -RLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142 (270)
T ss_dssp -CEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred -CEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCC
Confidence 9999999998877677778888999999999988866666778888888888888888766665566665 66666666
Q ss_pred CcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCC
Q 039925 187 NSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIP 266 (549)
Q Consensus 187 n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p 266 (549)
|.++ +..+..+..+ ++|+.|++++|.+++..
T Consensus 143 n~l~----------------------------------------------~~~~~~~~~l--~~L~~L~L~~n~l~~~~- 173 (270)
T 2o6q_A 143 NELQ----------------------------------------------SLPKGVFDKL--TSLKELRLYNNQLKRVP- 173 (270)
T ss_dssp SCCC----------------------------------------------CCCTTTTTTC--TTCCEEECCSSCCSCCC-
T ss_pred CcCC----------------------------------------------ccCHhHccCC--cccceeEecCCcCcEeC-
Confidence 6555 3223334445 66777777777666322
Q ss_pred CcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 267 HHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 174 ---~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 174 ---EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp ---TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ---hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 3456667777777777777775444556777777777777777764
No 58
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=3.1e-25 Score=230.68 Aligned_cols=252 Identities=19% Similarity=0.172 Sum_probs=192.9
Q ss_pred CccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCC
Q 039925 50 TPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNP 129 (549)
Q Consensus 50 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l 129 (549)
+..++++++|++|++++|.+++ +| .|..+++|++|+|++|++++ +| +..+++| ++|++++|.+++. + ++++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L-~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNL-TYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTC-SEEECCSSCCSCC-C--CTTC
T ss_pred ccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCC-CEEECcCCCCcee-e--cCCC
Confidence 3467788899999999999984 56 68889999999999999985 44 8888999 9999999998864 3 8889
Q ss_pred CCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEee
Q 039925 130 SAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYY 208 (549)
Q Consensus 130 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ 208 (549)
++|++|++++|.+++ +| +..+++|++|++++|++++. + +..++ |++|++++|...+.++ +. .+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~-~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VT-PQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CT-TCTTCCEEE
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--cc-cCCcCCEEE
Confidence 999999999999885 44 88899999999999998863 3 77777 9999999996655653 44 788999999
Q ss_pred ecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCc
Q 039925 209 ILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNN 287 (549)
Q Consensus 209 l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N 287 (549)
++. .+..+. +...++|+.|++++|.+++. .+..+ ++|+.|++++|++++ + | +..+++|++|++++|
T Consensus 177 ls~n~l~~l~-l~~l~~L~~L~l~~N~l~~~---~l~~l--~~L~~L~Ls~N~l~~-i----p--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 177 CSFNKITELD-VSQNKLLNRLNCDTNNITKL---DLNQN--IQLTFLDCSSNKLTE-I----D--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CCSSCCCCCC-CTTCTTCCEEECCSSCCSCC---CCTTC--TTCSEEECCSSCCSC-C----C--CTTCTTCSEEECCSS
T ss_pred CCCCccceec-cccCCCCCEEECcCCcCCee---ccccC--CCCCEEECcCCcccc-c----C--ccccCCCCEEEeeCC
Confidence 987 445544 44556899999999998865 36777 899999999999885 4 4 678889999999999
Q ss_pred cccccCCccccCCC-------CCCEEEccCCcccccCCCC--------CCCCCC-CcccCC
Q 039925 288 KLQGNLPSSLGYYQ-------NLMELSVSRNKLSASLPPL--------NSQHNH-SFSCPG 332 (549)
Q Consensus 288 ~l~~~~p~~l~~l~-------~L~~L~Ls~N~l~~~~p~~--------~ls~N~-~~~ip~ 332 (549)
++++..+..+.++. +|+.|++++|.+.+.+|.. ++++|. .+.+|.
T Consensus 244 ~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~ 304 (457)
T 3bz5_A 244 PLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDC 304 (457)
T ss_dssp CCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEEC
T ss_pred cCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceecc
Confidence 99865444444333 4455566666655555532 777775 455554
No 59
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.3e-26 Score=243.14 Aligned_cols=218 Identities=18% Similarity=0.125 Sum_probs=185.8
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCE
Q 039925 55 NFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQV 134 (549)
Q Consensus 55 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~ 134 (549)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++| ++|+|++|.+++..+ .++|++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L-~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTL-RTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTC-CEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCC-CEEEecCCcCCCCCC-----CCCcCE
Confidence 34589999999999998778899999999999999999996555 8999999 999999999986543 389999
Q ss_pred EEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccc
Q 039925 135 MIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLA 213 (549)
Q Consensus 135 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~ 213 (549)
|++++|.+++..+. .+++|++|+|++|.+++..|..+..++ |++|++++|.+++..|..+...+
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l------------ 168 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS------------ 168 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT------------
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC------------
Confidence 99999999966544 468899999999999998898999999 99999999999987777765333
Q ss_pred cccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccC
Q 039925 214 QKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNL 293 (549)
Q Consensus 214 ~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (549)
++|+.|+|++|.+++..+ +..+ ++|+.|+|++|.+++. |..+..+++|+.|+|++|.++ .+
T Consensus 169 ---------~~L~~L~Ls~N~l~~~~~--~~~l--~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~-~l 229 (487)
T 3oja_A 169 ---------DTLEHLNLQYNFIYDVKG--QVVF--AKLKTLDLSSNKLAFM-----GPEFQSAAGVTWISLRNNKLV-LI 229 (487)
T ss_dssp ---------TTCCEEECTTSCCCEEEC--CCCC--TTCCEEECCSSCCCEE-----CGGGGGGTTCSEEECTTSCCC-EE
T ss_pred ---------CcccEEecCCCccccccc--cccC--CCCCEEECCCCCCCCC-----CHhHcCCCCccEEEecCCcCc-cc
Confidence 368888888998886633 2246 8999999999999853 345888999999999999999 47
Q ss_pred CccccCCCCCCEEEccCCccc
Q 039925 294 PSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
|..+..+++|+.|++++|.++
T Consensus 230 p~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 230 EKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CTTCCCCTTCCEEECTTCCBC
T ss_pred chhhccCCCCCEEEcCCCCCc
Confidence 888889999999999999988
No 60
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.2e-25 Score=224.65 Aligned_cols=239 Identities=14% Similarity=0.104 Sum_probs=201.1
Q ss_pred ecC-ccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccc-cc
Q 039925 48 CLT-PHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLL-DF 125 (549)
Q Consensus 48 ~lp-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~-~~ 125 (549)
.+| ..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..+..+++| ++|++++|+++...+ ..
T Consensus 66 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~l~~~~~ 144 (353)
T 2z80_A 66 YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSL-TFLNLLGNPYKTLGETSL 144 (353)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTC-SEEECTTCCCSSSCSSCS
T ss_pred ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccC-CEEECCCCCCcccCchhh
Confidence 444 489999999999999999998888899999999999999999995444448999999 999999999996555 58
Q ss_pred cCCCCCCCEEEeecc-eeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCC
Q 039925 126 IGNPSAIQVMIFKEN-SLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPK 203 (549)
Q Consensus 126 ~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~ 203 (549)
|.++++|++|++++| .+....+..|.++++|++|++++|.+.+..|..+..++ |++|++++|.+. .+|..+...+++
T Consensus 145 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~ 223 (353)
T 2z80_A 145 FSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSS 223 (353)
T ss_dssp CTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTT
T ss_pred hccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhccc
Confidence 999999999999999 57767788999999999999999999998899999999 999999999997 677777667999
Q ss_pred CcEeeecc-ccccc-----ccccCcccccEEEcccccccc----ccChhhhhccccCccEEEcCCCcccccCCCcCcccc
Q 039925 204 GRNYYILL-LAQKL-----YWSDVSTTATIIAMGGNQISG----TITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSL 273 (549)
Q Consensus 204 L~~L~l~~-~~~~l-----~~l~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l 273 (549)
|+.|++++ .+... ........++.++++++.+.+ .+|..+..+ ++|+.|++++|+++ .+| +..+
T Consensus 224 L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l--~~L~~L~Ls~N~l~-~i~---~~~~ 297 (353)
T 2z80_A 224 VECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQI--SGLLELEFSRNQLK-SVP---DGIF 297 (353)
T ss_dssp EEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTC--TTCCEEECCSSCCC-CCC---TTTT
T ss_pred ccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcc--cCCCEEECCCCCCC-ccC---HHHH
Confidence 99999998 22222 222334578888898888876 467778888 99999999999998 554 2336
Q ss_pred CCccccCeeeccCccccccCC
Q 039925 274 GNLTLLTYLALDNNKLQGNLP 294 (549)
Q Consensus 274 ~~l~~L~~L~Ls~N~l~~~~p 294 (549)
..+++|++|+|++|.+.+..|
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEEeeCCCccCcCC
Confidence 899999999999999986443
No 61
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=3.7e-25 Score=229.97 Aligned_cols=195 Identities=21% Similarity=0.242 Sum_probs=117.0
Q ss_pred eecCccccCCCCCCEEEccCCcceecCCccccCCCCC-------------CEeecccccccc------------------
Q 039925 47 KCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRL-------------EYLLLANNHFSG------------------ 95 (549)
Q Consensus 47 g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~------------------ 95 (549)
|.+|++|+++++|++|++++|.+.+.+|..++++++| ++|++++|.+++
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~~~L~~L~l~~n~l 103 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSL 103 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCCTTCSEEECCSSCC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCcCCCCEEEccCCcC
Confidence 5666666666666666666666666666666655442 455555555442
Q ss_pred -cCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccc
Q 039925 96 -KIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFI 174 (549)
Q Consensus 96 -~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 174 (549)
.+|.. .++| ++|++++|++++. +.. .++|++|++++|.+++ +| .|+++++|++|++++|++++ +|..+
T Consensus 104 ~~lp~~---~~~L-~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~ 172 (454)
T 1jl5_A 104 TELPEL---PQSL-KSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP 172 (454)
T ss_dssp SSCCCC---CTTC-CEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC
T ss_pred Cccccc---cCCC-cEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc
Confidence 13322 1344 5555555555431 111 1578888888888874 66 58888888888888888774 45432
Q ss_pred cccccceeeCCCCcCcccCchhhhhcCCCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccE
Q 039925 175 FNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYA 253 (549)
Q Consensus 175 ~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~ 253 (549)
. .|++|++++|.+++ +| .+. .+++|+.|++++ .+..+. ...++|+.|++++|.+. .+| .+..+ ++|+.
T Consensus 173 ~--~L~~L~L~~n~l~~-l~-~~~-~l~~L~~L~l~~N~l~~l~--~~~~~L~~L~l~~n~l~-~lp-~~~~l--~~L~~ 241 (454)
T 1jl5_A 173 P--SLEFIAAGNNQLEE-LP-ELQ-NLPFLTAIYADNNSLKKLP--DLPLSLESIVAGNNILE-ELP-ELQNL--PFLTT 241 (454)
T ss_dssp T--TCCEEECCSSCCSS-CC-CCT-TCTTCCEEECCSSCCSSCC--CCCTTCCEEECCSSCCS-SCC-CCTTC--TTCCE
T ss_pred c--cccEEECcCCcCCc-Cc-ccc-CCCCCCEEECCCCcCCcCC--CCcCcccEEECcCCcCC-ccc-ccCCC--CCCCE
Confidence 1 28888888888874 66 454 788888888876 233322 12347888888888777 455 36677 77888
Q ss_pred EEcCCCcccc
Q 039925 254 LTMVKNKLSG 263 (549)
Q Consensus 254 L~L~~n~l~~ 263 (549)
|++++|++++
T Consensus 242 L~l~~N~l~~ 251 (454)
T 1jl5_A 242 IYADNNLLKT 251 (454)
T ss_dssp EECCSSCCSS
T ss_pred EECCCCcCCc
Confidence 8888887763
No 62
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=1.6e-26 Score=228.67 Aligned_cols=228 Identities=14% Similarity=0.144 Sum_probs=184.1
Q ss_pred cCccccCCCCCCEEEccCCcce-ecCCcccc-------CCCCCCEeecccccccccCCccc--ccccCccceeeeccccc
Q 039925 49 LTPHVGNFGYLRFINLVDNNFR-GEIPEKVG-------RLFRLEYLLLANNHFSGKIPANL--SHCSNLLTKLFICETHL 118 (549)
Q Consensus 49 lp~~~~~l~~L~~L~L~~n~l~-~~~p~~~~-------~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~~L~Ls~n~l 118 (549)
+|..+... |+.|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|..+ ..+++| ++|++++|++
T Consensus 57 ~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L-~~L~Ls~N~l 133 (312)
T 1wwl_A 57 DLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDL-NILNLRNVSW 133 (312)
T ss_dssp CCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCC-SEEEEESCBC
T ss_pred cHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCc-cEEEccCCCC
Confidence 36655544 888999999984 45777665 78999999999999998888876 889999 9999999999
Q ss_pred ccccccccCCC-----CCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceec--ccccc--cccc-cceeeCCCCc
Q 039925 119 SGQLLDFIGNP-----SAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGL--IPSFI--FNIS-LKWNFLPENS 188 (549)
Q Consensus 119 ~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~~--~~l~-L~~L~l~~n~ 188 (549)
++. |..++.+ ++|++|+|++|++++..|..|..+++|++|++++|++.+. .+..+ ..++ |++|++++|.
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 877 7777766 8999999999999977778999999999999999998765 33344 7778 9999999999
Q ss_pred Ccc--cCchhhhhcCCCCcEeeeccc-cccc---ccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCccc
Q 039925 189 FTG--NLPLEIGVTLPKGRNYYILLL-AQKL---YWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLS 262 (549)
Q Consensus 189 l~~--~~p~~~~~~l~~L~~L~l~~~-~~~l---~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~ 262 (549)
+++ .++..++..+++|+.|+++++ +... ......++|+.|++++|.++ .+|..+. ++|+.|+|++|+++
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~----~~L~~L~Ls~N~l~ 287 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP----AKLSVLDLSYNRLD 287 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC----SEEEEEECCSSCCC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc----CCceEEECCCCCCC
Confidence 983 344455557899999999883 3332 23334579999999999999 6676554 68999999999998
Q ss_pred ccCCCcCccccCCccccCeeeccCccccc
Q 039925 263 GPIPHHIASSLGNLTLLTYLALDNNKLQG 291 (549)
Q Consensus 263 ~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (549)
+. |. +..+++|++|+|++|.+++
T Consensus 288 ~~-----p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 288 RN-----PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SC-----CC-TTTSCEEEEEECTTCTTTC
T ss_pred CC-----hh-HhhCCCCCEEeccCCCCCC
Confidence 43 34 8899999999999999984
No 63
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.2e-24 Score=211.42 Aligned_cols=225 Identities=17% Similarity=0.154 Sum_probs=158.6
Q ss_pred cceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeec
Q 039925 35 GVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFIC 114 (549)
Q Consensus 35 gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls 114 (549)
.+.|... +++ .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|.+++..+..+..+++| ++|+++
T Consensus 11 ~~~c~~~--~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~L~ 84 (276)
T 2z62_A 11 TYQCMEL--NFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL-STLILT 84 (276)
T ss_dssp EEECTTS--CCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTC-CEEECT
T ss_pred eEEecCC--Ccc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCC-CEEECC
Confidence 4667542 222 4566553 478899999999886666688888899999999998886666678888888 888888
Q ss_pred ccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceec-ccccccccc-cceeeCCCCcCccc
Q 039925 115 ETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGL-IPSFIFNIS-LKWNFLPENSFTGN 192 (549)
Q Consensus 115 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~-L~~L~l~~n~l~~~ 192 (549)
+|.+++..+..|.++++|++|++++|.+.+..+..+..+++|++|++++|.+.+. +|..+..++ |++|++++|++++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 8888877777888888888888888888866565788888888888888887753 466666666 66666666666533
Q ss_pred CchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCcc----EEEcCCCcccccCCCc
Q 039925 193 LPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLY----ALTMVKNKLSGPIPHH 268 (549)
Q Consensus 193 ~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~----~L~L~~n~l~~~~p~~ 268 (549)
. +..+..+ .+|+ .|++++|.+++..
T Consensus 165 ~----------------------------------------------~~~~~~l--~~L~~l~l~L~ls~n~l~~~~--- 193 (276)
T 2z62_A 165 Y----------------------------------------------CTDLRVL--HQMPLLNLSLDLSLNPMNFIQ--- 193 (276)
T ss_dssp C----------------------------------------------GGGGHHH--HTCTTCCEEEECCSSCCCEEC---
T ss_pred C----------------------------------------------HHHhhhh--hhccccceeeecCCCcccccC---
Confidence 2 2333333 3333 6677777776322
Q ss_pred CccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCC
Q 039925 269 IASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLP 318 (549)
Q Consensus 269 l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 318 (549)
.......+|++|++++|++++..+..|..+++|+.|++++|++++..|
T Consensus 194 --~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 194 --PGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp --TTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred --ccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 222233467888888888875555556778888888888888876444
No 64
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.1e-24 Score=209.67 Aligned_cols=224 Identities=19% Similarity=0.164 Sum_probs=148.2
Q ss_pred EEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecce
Q 039925 62 INLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENS 141 (549)
Q Consensus 62 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 141 (549)
.+-.+.+++ .+|..+. ++|++|++++|++++..+..|..+++| ++|++++|.+++..+..|.++++|++|++++|.
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPEL-QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTC-SEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCC-cEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 444444555 5665443 467777777777775545566777777 777777777766666667777777777777777
Q ss_pred eeeeCCccccCCCCCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccC
Q 039925 142 LEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDV 221 (549)
Q Consensus 142 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~ 221 (549)
+++..+..|.++++|++|++++|.+.+..+..+..++
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~------------------------------------------- 124 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK------------------------------------------- 124 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCT-------------------------------------------
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCC-------------------------------------------
Confidence 7666666666677777777766666544333344333
Q ss_pred cccccEEEccccccccc-cChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccC----eeeccCccccccCCcc
Q 039925 222 STTATIIAMGGNQISGT-ITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLT----YLALDNNKLQGNLPSS 296 (549)
Q Consensus 222 ~~~L~~L~l~~n~l~~~-~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~----~L~Ls~N~l~~~~p~~ 296 (549)
+|++|++++|.+.+. +|..+..+ ++|+.|++++|++++.. +..+..+++|+ .|++++|.+++..+..
T Consensus 125 --~L~~L~l~~n~l~~~~l~~~~~~l--~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~ 196 (276)
T 2z62_A 125 --TLKELNVAHNLIQSFKLPEYFSNL--TNLEHLDLSSNKIQSIY----CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (276)
T ss_dssp --TCCEEECCSSCCCCCCCCGGGGGC--TTCCEEECCSSCCCEEC----GGGGHHHHTCTTCCEEEECCSSCCCEECTTS
T ss_pred --CCCEEECcCCccceecCchhhccC--CCCCEEECCCCCCCcCC----HHHhhhhhhccccceeeecCCCcccccCccc
Confidence 455555555555542 46777778 99999999999998543 45666777777 8999999999655554
Q ss_pred ccCCCCCCEEEccCCcccccCCCCCCCCCCCcccCCcccccccceeeecCCCCCCCC
Q 039925 297 LGYYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 297 l~~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~ 353 (549)
+ ...+|+.|++++|++++. |...+.. +..+.. +.+.+||+.|..
T Consensus 197 ~-~~~~L~~L~L~~n~l~~~-~~~~~~~----------l~~L~~-L~l~~N~~~c~c 240 (276)
T 2z62_A 197 F-KEIRLKELALDTNQLKSV-PDGIFDR----------LTSLQK-IWLHTNPWDCSC 240 (276)
T ss_dssp S-CSCCEEEEECCSSCCSCC-CTTTTTT----------CCSCCE-EECCSSCBCCCT
T ss_pred c-CCCcccEEECCCCceeec-CHhHhcc----------cccccE-EEccCCcccccC
Confidence 4 445899999999999853 3221111 122222 778899988865
No 65
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=5.4e-25 Score=235.81 Aligned_cols=256 Identities=20% Similarity=0.236 Sum_probs=162.7
Q ss_pred CCCCCCCCCCCCCCCCcc--------eeCCC--------CCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCC
Q 039925 19 GVTSSWSNSIDLCQWRGV--------TCTHQ--------HQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFR 82 (549)
Q Consensus 19 ~~~~~w~~~~~~c~w~gv--------~c~~~--------~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 82 (549)
..+++|....++|.|+|. .|... ..++ ..+|..+. ++|++|+|++|.|+ .+|. .+++
T Consensus 10 ~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L-~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 10 AVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGL-TTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCC-SCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCc-CccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 355678777789999552 22211 1122 36787665 79999999999999 6776 5789
Q ss_pred CCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecc
Q 039925 83 LEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNIN 162 (549)
Q Consensus 83 L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (549)
|++|+|++|+|+ .+|. .+++| ++|++++|.+++. |. .+++|+.|++++|+++ .+|.. +++|++|+++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L-~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGL-LELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVS 149 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTC-CEEEECSCCCCCC-CC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCC-CEEECcCCcCCCC-CC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECc
Confidence 999999999998 6776 67888 9999999999854 33 5688899999999888 46653 4788888888
Q ss_pred cCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc-cccccccc------------------cCc
Q 039925 163 RNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL-LAQKLYWS------------------DVS 222 (549)
Q Consensus 163 ~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~-~~~~l~~l------------------~~~ 222 (549)
+|.+++ +|.. +. |+.|++++|.++ .+| ..+++|+.|++++ .+..+... ...
T Consensus 150 ~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~----~~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~ 220 (622)
T 3g06_A 150 DNQLAS-LPAL---PSELCKLWAYNNQLT-SLP----MLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALP 220 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCC
T ss_pred CCcCCC-cCCc---cCCCCEEECCCCCCC-CCc----ccCCCCcEEECCCCCCCCCCCccchhhEEECcCCcccccCCCC
Confidence 888874 3332 23 555666666555 344 1345555555554 12221110 112
Q ss_pred ccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCC
Q 039925 223 TTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQN 302 (549)
Q Consensus 223 ~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 302 (549)
++|+.|++++|.+++ +| ..+ ++|+.|+|++|.++ .+ |. .+++|+.|+|++|+|+ .+|..+..+++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l--~~L~~L~Ls~N~L~-~l----p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLP--SELKELMVSGNRLT-SL----PM---LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCC--TTCCEEECCSSCCS-CC----CC---CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred CCCCEEEccCCccCc-CC---CCC--CcCcEEECCCCCCC-cC----Cc---ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 455566666665553 23 223 55666666666655 23 22 3455666666666666 55666666666
Q ss_pred CCEEEccCCcccccCC
Q 039925 303 LMELSVSRNKLSASLP 318 (549)
Q Consensus 303 L~~L~Ls~N~l~~~~p 318 (549)
|+.|+|++|++++.+|
T Consensus 286 L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 286 ETTVNLEGNPLSERTL 301 (622)
T ss_dssp TCEEECCSCCCCHHHH
T ss_pred cCEEEecCCCCCCcCH
Confidence 6666666666665433
No 66
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=6.4e-25 Score=217.70 Aligned_cols=219 Identities=17% Similarity=0.119 Sum_probs=180.1
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEe
Q 039925 58 YLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIF 137 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 137 (549)
.++.++++.+.+...+...+..+++|++|+|++|++++..|..|..+++| ++|++++|.+++..+ +..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL-ELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTC-CEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcC-CEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 35667777887775555666778899999999999997777889999999 999999999987665 899999999999
Q ss_pred ecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccc
Q 039925 138 KENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKL 216 (549)
Q Consensus 138 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l 216 (549)
++|.+++. + ..++|++|++++|.+.+..+.. ++ |++|++++|.+++..+..+. .
T Consensus 88 s~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~-~---------------- 142 (317)
T 3o53_A 88 NNNYVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEG-C---------------- 142 (317)
T ss_dssp CSSEEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTG-G----------------
T ss_pred cCCccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhh-c----------------
Confidence 99999843 2 3489999999999998765543 45 99999999999954444443 2
Q ss_pred ccccCcccccEEEccccccccccChhhh-hccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCc
Q 039925 217 YWSDVSTTATIIAMGGNQISGTITLGIK-KLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPS 295 (549)
Q Consensus 217 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~-~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~ 295 (549)
.++|+.|++++|.+++..+..+. .+ ++|+.|++++|.+++. + ....+++|++|+|++|+++ .+|.
T Consensus 143 -----l~~L~~L~Ls~N~l~~~~~~~~~~~l--~~L~~L~L~~N~l~~~-----~-~~~~l~~L~~L~Ls~N~l~-~l~~ 208 (317)
T 3o53_A 143 -----RSRVQYLDLKLNEIDTVNFAELAASS--DTLEHLNLQYNFIYDV-----K-GQVVFAKLKTLDLSSNKLA-FMGP 208 (317)
T ss_dssp -----GSSEEEEECTTSCCCEEEGGGGGGGT--TTCCEEECTTSCCCEE-----E-CCCCCTTCCEEECCSSCCC-EECG
T ss_pred -----cCCCCEEECCCCCCCcccHHHHhhcc--CcCCEEECCCCcCccc-----c-cccccccCCEEECCCCcCC-cchh
Confidence 24789999999999987777664 67 9999999999999843 2 2345899999999999999 4666
Q ss_pred cccCCCCCCEEEccCCcccccCCC
Q 039925 296 SLGYYQNLMELSVSRNKLSASLPP 319 (549)
Q Consensus 296 ~l~~l~~L~~L~Ls~N~l~~~~p~ 319 (549)
.+..+++|+.|++++|++++ +|.
T Consensus 209 ~~~~l~~L~~L~L~~N~l~~-l~~ 231 (317)
T 3o53_A 209 EFQSAAGVTWISLRNNKLVL-IEK 231 (317)
T ss_dssp GGGGGTTCSEEECTTSCCCE-ECT
T ss_pred hhcccCcccEEECcCCcccc-hhh
Confidence 79999999999999999995 443
No 67
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=3.8e-24 Score=222.30 Aligned_cols=259 Identities=21% Similarity=0.256 Sum_probs=179.5
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCc------------cceeeeccccccccc
Q 039925 55 NFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNL------------LTKLFICETHLSGQL 122 (549)
Q Consensus 55 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L------------~~~L~Ls~n~l~~~~ 122 (549)
+.++|++|++++|.+ +.+|++|+++++|++|++++|.+.+.+|..++.+++| +++|++++|.+++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 468999999999999 6999999999999999999999999999999888763 2899999999885 3
Q ss_pred ccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcC
Q 039925 123 LDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTL 201 (549)
Q Consensus 123 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l 201 (549)
|.. .++|++|++++|.+++ +|.. +++|++|++++|++.+ +|.. .+ |++|++++|.+++ +| .+. .+
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~-~l 152 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQ-NS 152 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCT-TC
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccC-CC
Confidence 432 4789999999999995 6754 4789999999999884 3321 15 9999999999984 77 465 89
Q ss_pred CCCcEeeecc-cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccC
Q 039925 202 PKGRNYYILL-LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLT 280 (549)
Q Consensus 202 ~~L~~L~l~~-~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~ 280 (549)
++|++|++++ .+..+. ....+|++|++++|.+++ +| .+..+ ++|+.|++++|.+++ +| .. .++|+
T Consensus 153 ~~L~~L~l~~N~l~~lp--~~~~~L~~L~L~~n~l~~-l~-~~~~l--~~L~~L~l~~N~l~~-l~----~~---~~~L~ 218 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKKLP--DLPPSLEFIAAGNNQLEE-LP-ELQNL--PFLTAIYADNNSLKK-LP----DL---PLSLE 218 (454)
T ss_dssp TTCCEEECCSSCCSCCC--CCCTTCCEEECCSSCCSS-CC-CCTTC--TTCCEEECCSSCCSS-CC----CC---CTTCC
T ss_pred CCCCEEECCCCcCcccC--CCcccccEEECcCCcCCc-Cc-cccCC--CCCCEEECCCCcCCc-CC----CC---cCccc
Confidence 9999999987 333332 223589999999999986 55 58888 999999999999884 43 22 25788
Q ss_pred eeeccCccccccCCccccCCCCCCEEEccCCcccccCCCC-------CCCCCCCcccCCcccccccceeeecCCC
Q 039925 281 YLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL-------NSQHNHSFSCPGFEFSVIKLEFQIPGNK 348 (549)
Q Consensus 281 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-------~ls~N~~~~ip~~~~~~l~l~~~~~gn~ 348 (549)
+|++++|.++ .+|. +..+++|+.|++++|++++ +|.. ++++|++..+|... ..+.. +.+.+|.
T Consensus 219 ~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~l~~~~-~~L~~-L~ls~N~ 288 (454)
T 1jl5_A 219 SIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELP-QSLTF-LDVSENI 288 (454)
T ss_dssp EEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCC-TTCCE-EECCSSC
T ss_pred EEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccccCccc-CcCCE-EECcCCc
Confidence 8999999888 6774 8888899999999998886 3332 78888877777643 33322 4455554
No 68
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.90 E-value=6.6e-24 Score=222.63 Aligned_cols=220 Identities=19% Similarity=0.140 Sum_probs=178.2
Q ss_pred CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCE
Q 039925 79 RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFY 158 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 158 (549)
.+++|++|+|++|.+++..|..|..+++| ++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKL-ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTC-CEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCC-CEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 34489999999999998778899999999 999999999987766 999999999999999998533 2389999
Q ss_pred EecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccc
Q 039925 159 DNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISG 237 (549)
Q Consensus 159 L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~ 237 (549)
|++++|.+.+..+.. ++ |+.|++++|.+++..|..+. .+ ++|+.|++++|.+++
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~-~l---------------------~~L~~L~Ls~N~l~~ 158 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEG-CR---------------------SRVQYLDLKLNEIDT 158 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGG-GG---------------------SSEEEEECTTSCCCE
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhc-CC---------------------CCCCEEECCCCCCCC
Confidence 999999999766543 46 99999999999976666554 22 378999999999999
Q ss_pred ccChhhh-hccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccccc
Q 039925 238 TITLGIK-KLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSAS 316 (549)
Q Consensus 238 ~~~~~~~-~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 316 (549)
..|..+. .+ ++|+.|+|++|.+++.. .+..+++|++|+|++|.+++ +|..+..+++|+.|+|++|.+++
T Consensus 159 ~~~~~l~~~l--~~L~~L~Ls~N~l~~~~------~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~- 228 (487)
T 3oja_A 159 VNFAELAASS--DTLEHLNLQYNFIYDVK------GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL- 228 (487)
T ss_dssp EEGGGGGGGT--TTCCEEECTTSCCCEEE------CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-
T ss_pred cChHHHhhhC--CcccEEecCCCcccccc------ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-
Confidence 8888876 68 99999999999998542 24468999999999999995 56669999999999999999996
Q ss_pred CCCCCCCCCCCcccCCcccccccceeeecCCCCCCCC
Q 039925 317 LPPLNSQHNHSFSCPGFEFSVIKLEFQIPGNKKLCGG 353 (549)
Q Consensus 317 ~p~~~ls~N~~~~ip~~~~~~l~l~~~~~gn~~~c~~ 353 (549)
+|.. +.. +..+.. +++.+|+..|+.
T Consensus 229 lp~~-l~~----------l~~L~~-L~l~~N~l~c~~ 253 (487)
T 3oja_A 229 IEKA-LRF----------SQNLEH-FDLRGNGFHCGT 253 (487)
T ss_dssp ECTT-CCC----------CTTCCE-EECTTCCBCHHH
T ss_pred cchh-hcc----------CCCCCE-EEcCCCCCcCcc
Confidence 4432 110 112222 567777777754
No 69
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.4e-23 Score=203.31 Aligned_cols=203 Identities=21% Similarity=0.258 Sum_probs=111.9
Q ss_pred cCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCC
Q 039925 54 GNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQ 133 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~ 133 (549)
..+++|+.|++++|.++ .++ .+..+++|++|++++|.+++ + ..+..+++| ++|++++|.+++..+..|.++++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNL-TYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTC-CEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred ccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCC-CEEECCCCccCccChhHhcCCcCCC
Confidence 34555666666666555 232 35555666666666666553 2 245555555 5666666655555555555555555
Q ss_pred EEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccc
Q 039925 134 VMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLA 213 (549)
Q Consensus 134 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~ 213 (549)
+|++++|.+++..+..|..+++|++|++++|.+++..+..+..++
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~----------------------------------- 157 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLT----------------------------------- 157 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----------------------------------
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCc-----------------------------------
Confidence 555555555544444455555555555555555544443444444
Q ss_pred cccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccC
Q 039925 214 QKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNL 293 (549)
Q Consensus 214 ~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (549)
+|+.|++++|.+++..+..+..+ ++|+.|++++|++++.. +..+..+++|++|++++|.+.+
T Consensus 158 ----------~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~~~~-- 219 (272)
T 3rfs_A 158 ----------NLTELDLSYNQLQSLPEGVFDKL--TQLKDLRLYQNQLKSVP----DGVFDRLTSLQYIWLHDNPWDC-- 219 (272)
T ss_dssp ----------TCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCSCCC----TTTTTTCTTCCEEECCSSCBCC--
T ss_pred ----------cCCEEECCCCCcCccCHHHhcCC--ccCCEEECCCCcCCccC----HHHHhCCcCCCEEEccCCCccc--
Confidence 34444455555554444444555 66666666666666432 3445666666666666666553
Q ss_pred CccccCCCCCCEEEccCCcccccCCC
Q 039925 294 PSSLGYYQNLMELSVSRNKLSASLPP 319 (549)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~~~~p~ 319 (549)
.+++|+.|+++.|.++|.+|.
T Consensus 220 -----~~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 220 -----TCPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp -----CTTTTHHHHHHHHHTGGGBBC
T ss_pred -----cCcHHHHHHHHHHhCCCcccC
Confidence 234566666666666666654
No 70
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=6.4e-23 Score=194.65 Aligned_cols=204 Identities=17% Similarity=0.157 Sum_probs=153.9
Q ss_pred eecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeeccccc-ccccCCcccccccCccceeeecc-ccccccccc
Q 039925 47 KCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNH-FSGKIPANLSHCSNLLTKLFICE-THLSGQLLD 124 (549)
Q Consensus 47 g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~~L~Ls~-n~l~~~~~~ 124 (549)
..+|. +. ++|++|++++|++++..+..|.++++|++|++++|+ ++...+..|..+++| ++|++++ |.++...+.
T Consensus 24 ~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L-~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 24 QRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV-THIEIRNTRNLTYIDPD 99 (239)
T ss_dssp SSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTC-CEEEEEEETTCCEECTT
T ss_pred cccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCC-cEEECCCCCCeeEcCHH
Confidence 35676 43 389999999999996666689999999999999997 885555678899999 9999998 999877778
Q ss_pred ccCCCCCCCEEEeecceeeeeCCccccCCCCCC---EEecccC-cceecccccccccc-cc-eeeCCCCcCcccCchhhh
Q 039925 125 FIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLF---YDNINRN-EFSGLIPSFIFNIS-LK-WNFLPENSFTGNLPLEIG 198 (549)
Q Consensus 125 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~-L~-~L~l~~n~l~~~~p~~~~ 198 (549)
.|.++++|++|++++|.+++ +|. |..+++|+ +|++++| .+.+..+..|..++ |+ +|++++|.++ .+|...+
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~ 176 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAF 176 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTT
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhc
Confidence 89999999999999999984 676 88888888 9999998 88866666677777 77 7777777776 4444322
Q ss_pred hcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCc-ccccCCCcCccccCCc-
Q 039925 199 VTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNK-LSGPIPHHIASSLGNL- 276 (549)
Q Consensus 199 ~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~-l~~~~p~~l~~~l~~l- 276 (549)
.. ++|+.|++++|+ ++ .+| +..|..+
T Consensus 177 ----------------------------------------------~~--~~L~~L~L~~n~~l~-~i~---~~~~~~l~ 204 (239)
T 2xwt_C 177 ----------------------------------------------NG--TKLDAVYLNKNKYLT-VID---KDAFGGVY 204 (239)
T ss_dssp ----------------------------------------------TT--CEEEEEECTTCTTCC-EEC---TTTTTTCS
T ss_pred ----------------------------------------------CC--CCCCEEEcCCCCCcc-cCC---HHHhhccc
Confidence 12 456666666663 55 332 3456677
Q ss_pred cccCeeeccCccccccCCccccCCCCCCEEEccCCc
Q 039925 277 TLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNK 312 (549)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 312 (549)
++|++|++++|+++ .+|.. .+++|+.|+++++.
T Consensus 205 ~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 205 SGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp BCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC-
T ss_pred cCCcEEECCCCccc-cCChh--HhccCceeeccCcc
Confidence 77888888888887 45543 56777788777653
No 71
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.90 E-value=3.3e-22 Score=214.21 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=199.1
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEE
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMI 136 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 136 (549)
.+++.|++++|.++ .+|..+. ++|++|+|++|.|+ .+|. .+++| ++|+|++|+++. +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L-~~L~Ls~N~l~~-lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL-RTLEVSGNQLTS-LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC-CEEEECSCCCSC-CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC-CEEEcCCCcCCc-CCC---CCCCCCEEE
Confidence 46999999999999 8888776 89999999999999 6777 57888 999999999985 554 689999999
Q ss_pred eecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc-ccc
Q 039925 137 FKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL-LAQ 214 (549)
Q Consensus 137 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~-~~~ 214 (549)
|++|.++ .+|. .+++|++|++++|+++. +|.. ++ |++|++++|.++ .+|. .+++|+.|++++ .+.
T Consensus 108 Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~-~l~~----~~~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 108 IFSNPLT-HLPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA-SLPA----LPSELCKLWAYNNQLT 174 (622)
T ss_dssp ECSCCCC-CCCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCS
T ss_pred CcCCcCC-CCCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC-CcCC----ccCCCCEEECCCCCCC
Confidence 9999999 4565 67899999999999985 5543 36 999999999998 4554 457899999987 444
Q ss_pred ccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCC
Q 039925 215 KLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLP 294 (549)
Q Consensus 215 ~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p 294 (549)
.+. ...++|+.|++++|.+++ +|.. + ++|+.|++++|.++ .+ |. .+++|+.|+|++|++++ +|
T Consensus 175 ~l~--~~~~~L~~L~Ls~N~l~~-l~~~---~--~~L~~L~L~~N~l~-~l----~~---~~~~L~~L~Ls~N~L~~-lp 237 (622)
T 3g06_A 175 SLP--MLPSGLQELSVSDNQLAS-LPTL---P--SELYKLWAYNNRLT-SL----PA---LPSGLKELIVSGNRLTS-LP 237 (622)
T ss_dssp CCC--CCCTTCCEEECCSSCCSC-CCCC---C--TTCCEEECCSSCCS-SC----CC---CCTTCCEEECCSSCCSC-CC
T ss_pred CCc--ccCCCCcEEECCCCCCCC-CCCc---c--chhhEEECcCCccc-cc----CC---CCCCCCEEEccCCccCc-CC
Confidence 444 445799999999999985 3432 3 78999999999998 34 32 24789999999999994 66
Q ss_pred ccccCCCCCCEEEccCCcccccCCCC-------CCCCCCCcccCCcc--cccccceeeecCCCCC
Q 039925 295 SSLGYYQNLMELSVSRNKLSASLPPL-------NSQHNHSFSCPGFE--FSVIKLEFQIPGNKKL 350 (549)
Q Consensus 295 ~~l~~l~~L~~L~Ls~N~l~~~~p~~-------~ls~N~~~~ip~~~--~~~l~l~~~~~gn~~~ 350 (549)
..+++|+.|+|++|+|+. +|.. ++++|++..+|..+ +..+.. +++.+|+..
T Consensus 238 ---~~l~~L~~L~Ls~N~L~~-lp~~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~-L~L~~N~l~ 297 (622)
T 3g06_A 238 ---VLPSELKELMVSGNRLTS-LPMLPSGLLSLSVYRNQLTRLPESLIHLSSETT-VNLEGNPLS 297 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCCSCCGGGGGSCTTCE-EECCSCCCC
T ss_pred ---CCCCcCcEEECCCCCCCc-CCcccccCcEEeCCCCCCCcCCHHHhhccccCE-EEecCCCCC
Confidence 456899999999999985 4433 89999999999876 444433 677888754
No 72
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=8.3e-23 Score=199.53 Aligned_cols=203 Identities=20% Similarity=0.189 Sum_probs=136.4
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAI 132 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L 132 (549)
+.++++++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|..+++| ++|++++|.+++..+. +.+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRL-TQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTC-CEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCC-CEEECCCCccCcccCC--CCCCcC
Confidence 566777888888888877 6666554 577888888888876666777777777 7888888777754332 667777
Q ss_pred CEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc
Q 039925 133 QVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL 211 (549)
Q Consensus 133 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~ 211 (549)
++|++++|.++ .+|..+..+++|++|++++|++++..+..|..++ |++|++++|+++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~--------------------- 137 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK--------------------- 137 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC---------------------
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC---------------------
Confidence 77777777777 6677777777777777777777755555566665 666666666555
Q ss_pred cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccc
Q 039925 212 LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQG 291 (549)
Q Consensus 212 ~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (549)
+..+..|..+ ++|+.|+|++|+++ .+| +..+..+++|++|+|++|+++
T Consensus 138 -------------------------~~~~~~~~~l--~~L~~L~L~~N~l~-~l~---~~~~~~l~~L~~L~L~~N~l~- 185 (290)
T 1p9a_G 138 -------------------------TLPPGLLTPT--PKLEKLSLANNNLT-ELP---AGLLNGLENLDTLLLQENSLY- 185 (290)
T ss_dssp -------------------------CCCTTTTTTC--TTCCEEECTTSCCS-CCC---TTTTTTCTTCCEEECCSSCCC-
T ss_pred -------------------------ccChhhcccc--cCCCEEECCCCcCC-ccC---HHHhcCcCCCCEEECCCCcCC-
Confidence 3333334444 66666666666666 332 234566677777777777776
Q ss_pred cCCccccCCCCCCEEEccCCcccc
Q 039925 292 NLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 292 ~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
.+|..+..+++|+.|+|++|.+..
T Consensus 186 ~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 186 TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccChhhcccccCCeEEeCCCCccC
Confidence 566666666677777777777653
No 73
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.7e-25 Score=226.82 Aligned_cols=250 Identities=16% Similarity=0.190 Sum_probs=188.6
Q ss_pred ecCccccCCCCCCEEEccCCcceec----CCccccCCCCCCEeecccc---cccccCCccc-------ccccCccceeee
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGE----IPEKVGRLFRLEYLLLANN---HFSGKIPANL-------SHCSNLLTKLFI 113 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~~L~L 113 (549)
.++..+..+++|++|+|++|.++.. ++..|..+++|++|+|++| ++++.+|..+ ..+++| ++|+|
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L-~~L~L 101 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKL-HTVRL 101 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTC-CEEEC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcc-cEEEC
Confidence 5677788889999999999998865 3445778999999999986 4455666655 678888 99999
Q ss_pred ccccccc----ccccccCCCCCCCEEEeecceeeeeCCcc----ccCC---------CCCCEEecccCcce-eccc---c
Q 039925 114 CETHLSG----QLLDFIGNPSAIQVMIFKENSLEGKFPNT----LSNL---------RSLFYDNINRNEFS-GLIP---S 172 (549)
Q Consensus 114 s~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~p~~----~~~l---------~~L~~L~L~~n~l~-~~~p---~ 172 (549)
++|.++. .+|..+..+++|++|+|++|.++...+.. +..+ ++|++|++++|.+. ..++ .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 9999887 46778888899999999999886443333 3334 88999999999887 3344 4
Q ss_pred cccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccc----cccChhhhhcc
Q 039925 173 FIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQIS----GTITLGIKKLI 247 (549)
Q Consensus 173 ~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~----~~~~~~~~~l~ 247 (549)
.+..++ |++|++++|.++..--..+.. ..+...++|+.|+|++|.++ ..+|..+..+
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~-----------------~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~- 243 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLL-----------------EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW- 243 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHH-----------------TTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC-
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHH-----------------HHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC-
Confidence 566777 999999999887321001110 01112347889999999996 5677888888
Q ss_pred ccCccEEEcCCCcccccCCCcCcccc--CCccccCeeeccCccccc----cCCccc-cCCCCCCEEEccCCcccccC
Q 039925 248 FVNLYALTMVKNKLSGPIPHHIASSL--GNLTLLTYLALDNNKLQG----NLPSSL-GYYQNLMELSVSRNKLSASL 317 (549)
Q Consensus 248 ~~~L~~L~L~~n~l~~~~p~~l~~~l--~~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~L~Ls~N~l~~~~ 317 (549)
++|+.|+|++|.+++.....++..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 244 -~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 244 -PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp -TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred -CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 9999999999999865322335666 448999999999999997 478777 66899999999999998643
No 74
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.3e-22 Score=198.25 Aligned_cols=206 Identities=20% Similarity=0.201 Sum_probs=151.9
Q ss_pred cccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCC
Q 039925 76 KVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRS 155 (549)
Q Consensus 76 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 155 (549)
.+.++++|+++++++|.++ .+|..+. +.+ +.|++++|.+++..+..|..+++|++|+|++|.+++..+ ...+++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 78 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDT-TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPV 78 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTC-CEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTT
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCC-CEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCc
Confidence 3667888899999988888 6776664 567 888888888887777788888888888888888874332 256777
Q ss_pred CCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccc
Q 039925 156 LFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQI 235 (549)
Q Consensus 156 L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l 235 (549)
|++|++++|++. .+|..+..++ +|+.|++++|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~---------------------------------------------~L~~L~l~~N~l 112 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLP---------------------------------------------ALTVLDVSFNRL 112 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCT---------------------------------------------TCCEEECCSSCC
T ss_pred CCEEECCCCcCC-cCchhhccCC---------------------------------------------CCCEEECCCCcC
Confidence 777777777765 3443333333 455566666666
Q ss_pred ccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 236 SGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 236 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
++..+..|..+ ++|+.|+|++|++++ +| +..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+++.
T Consensus 113 ~~l~~~~~~~l--~~L~~L~L~~N~l~~-~~---~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 186 (290)
T 1p9a_G 113 TSLPLGALRGL--GELQELYLKGNELKT-LP---PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT 186 (290)
T ss_dssp CCCCSSTTTTC--TTCCEEECTTSCCCC-CC---TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred cccCHHHHcCC--CCCCEEECCCCCCCc-cC---hhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc
Confidence 65556677778 999999999999984 43 4667899999999999999996555667899999999999999983
Q ss_pred cCCCCCCCCCCCcccCCcccccccce-eeecCCCCCCCC
Q 039925 316 SLPPLNSQHNHSFSCPGFEFSVIKLE-FQIPGNKKLCGG 353 (549)
Q Consensus 316 ~~p~~~ls~N~~~~ip~~~~~~l~l~-~~~~gn~~~c~~ 353 (549)
+|. .++....++ +.+.|||+.|..
T Consensus 187 -ip~-------------~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 187 -IPK-------------GFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp -CCT-------------TTTTTCCCSEEECCSCCBCCSG
T ss_pred -cCh-------------hhcccccCCeEEeCCCCccCcC
Confidence 443 332221221 778999999963
No 75
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=5.7e-23 Score=206.55 Aligned_cols=243 Identities=14% Similarity=0.104 Sum_probs=188.6
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCc-ccccccCccc
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPA-NLSHCSNLLT 109 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~ 109 (549)
|+|+.|.|+. .+++ .||..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.+++++++
T Consensus 9 C~~~~v~C~~--~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~ 83 (350)
T 4ay9_X 9 CSNRVFLCQE--SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE 83 (350)
T ss_dssp EETTEEEEES--TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCE
T ss_pred eeCCEEEecC--CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhh
Confidence 6899999975 3444 678766 36899999999999954456899999999999999998766664 5788988845
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEeccc-Ccceecccccccccc--cceeeCCC
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINR-NEFSGLIPSFIFNIS--LKWNFLPE 186 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~--L~~L~l~~ 186 (549)
.+.++.|+++...|..|..+++|++|++++|++....+..+....++..|++.+ +.+....+..|..+. ++.|++++
T Consensus 84 ~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 84 IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS
T ss_pred hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccc
Confidence 688888999988899999999999999999999966666777888899999976 567666666777775 89999999
Q ss_pred CcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccc-cccccccChhhhhccccCccEEEcCCCcccccC
Q 039925 187 NSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGG-NQISGTITLGIKKLIFVNLYALTMVKNKLSGPI 265 (549)
Q Consensus 187 n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~-n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~ 265 (549)
|+++ .+|..++ .. .+|+.|++++ |.++...+..|..+ ++|+.|+|++|+++ .+
T Consensus 164 N~i~-~i~~~~f-~~---------------------~~L~~l~l~~~n~l~~i~~~~f~~l--~~L~~LdLs~N~l~-~l 217 (350)
T 4ay9_X 164 NGIQ-EIHNSAF-NG---------------------TQLDELNLSDNNNLEELPNDVFHGA--SGPVILDISRTRIH-SL 217 (350)
T ss_dssp SCCC-EECTTSS-TT---------------------EEEEEEECTTCTTCCCCCTTTTTTE--ECCSEEECTTSCCC-CC
T ss_pred cccc-CCChhhc-cc---------------------cchhHHhhccCCcccCCCHHHhccC--cccchhhcCCCCcC-cc
Confidence 9998 6666554 11 2678888875 66665545678888 99999999999998 45
Q ss_pred CCcCccccCCccccCeeeccCc-cccccCCccccCCCCCCEEEccCCc
Q 039925 266 PHHIASSLGNLTLLTYLALDNN-KLQGNLPSSLGYYQNLMELSVSRNK 312 (549)
Q Consensus 266 p~~l~~~l~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N~ 312 (549)
| +..+. +|+.|.+.++ .+. .+|. +..+++|+.++++++.
T Consensus 218 p---~~~~~---~L~~L~~l~~~~l~-~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 218 P---SYGLE---NLKKLRARSTYNLK-KLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp C---SSSCT---TCCEEECTTCTTCC-CCCC-TTTCCSCCEEECSCHH
T ss_pred C---hhhhc---cchHhhhccCCCcC-cCCC-chhCcChhhCcCCCCc
Confidence 4 23344 4445544443 344 6674 8889999999998764
No 76
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.6e-22 Score=195.66 Aligned_cols=211 Identities=17% Similarity=0.245 Sum_probs=159.9
Q ss_pred CCCCCCCCCC--CCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCc
Q 039925 22 SSWSNSIDLC--QWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPA 99 (549)
Q Consensus 22 ~~w~~~~~~c--~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 99 (549)
=.|.+..=-| .|..+.|+. .+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++...+.
T Consensus 5 C~~~~~~C~c~~~~~~l~~~~--~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 5 CKKDGGVCSCNNNKNSVDCSS--KKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp BGGGTCSBEEETTTTEEECTT--SCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred CCCCCCCCEeCCCCCEEEccC--CCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 3575444124 578899975 3444 5676654 6899999999999966667899999999999999999954444
Q ss_pred ccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-
Q 039925 100 NLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS- 178 (549)
Q Consensus 100 ~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~- 178 (549)
.|..+++| ++|++++|.++...+..|..+++|++|++++|.+++..+..|..+++|++|+|++|.+.+..+..|..++
T Consensus 80 ~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 158 (270)
T 2o6q_A 80 IFKELKNL-ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158 (270)
T ss_dssp TTSSCTTC-CEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhcCCCCC-CEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcc
Confidence 56889999 9999999999988888899999999999999999987788899999999999999999976666678888
Q ss_pred cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCC
Q 039925 179 LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVK 258 (549)
Q Consensus 179 L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~ 258 (549)
|++|++++|.+++..+..+. .+ ++|+.|++++|.+++..+..+..+ ++|+.|+|++
T Consensus 159 L~~L~L~~n~l~~~~~~~~~-~l---------------------~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~l~~ 214 (270)
T 2o6q_A 159 LKELRLYNNQLKRVPEGAFD-KL---------------------TELKTLKLDNNQLKRVPEGAFDSL--EKLKMLQLQE 214 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTT-TC---------------------TTCCEEECCSSCCSCCCTTTTTTC--TTCCEEECCS
T ss_pred cceeEecCCcCcEeChhHhc-cC---------------------CCcCEEECCCCcCCcCCHHHhccc--cCCCEEEecC
Confidence 88888888888732222222 12 245556666666655444445555 5666666666
Q ss_pred Cccc
Q 039925 259 NKLS 262 (549)
Q Consensus 259 n~l~ 262 (549)
|.+.
T Consensus 215 N~~~ 218 (270)
T 2o6q_A 215 NPWD 218 (270)
T ss_dssp SCBC
T ss_pred CCee
Confidence 6554
No 77
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.1e-24 Score=220.25 Aligned_cols=254 Identities=17% Similarity=0.137 Sum_probs=185.3
Q ss_pred ceEeecCccccCCCCCCEEEccCCcceecCC----ccccCCC-CCCEeecccccccccCCcccccc-----cCccceeee
Q 039925 44 RINKCLTPHVGNFGYLRFINLVDNNFRGEIP----EKVGRLF-RLEYLLLANNHFSGKIPANLSHC-----SNLLTKLFI 113 (549)
Q Consensus 44 ~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~~L~L 113 (549)
++.|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++| ++|+|
T Consensus 9 ~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L-~~L~L 87 (362)
T 3goz_A 9 PGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV-TSLNL 87 (362)
T ss_dssp TTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC-CEEEC
T ss_pred cchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc-cEEEC
Confidence 4455667666666779999999999885555 6777888 89999999999987767777665 888 99999
Q ss_pred cccccccccccc----cCCC-CCCCEEEeecceeeeeCCccc----cC-CCCCCEEecccCcceeccc----ccccccc-
Q 039925 114 CETHLSGQLLDF----IGNP-SAIQVMIFKENSLEGKFPNTL----SN-LRSLFYDNINRNEFSGLIP----SFIFNIS- 178 (549)
Q Consensus 114 s~n~l~~~~~~~----~~~l-~~L~~L~L~~n~l~~~~p~~~----~~-l~~L~~L~L~~n~l~~~~p----~~~~~l~- 178 (549)
++|.+++..+.. +..+ ++|++|+|++|.+++..+..+ .. .++|++|+|++|.+....+ ..+....
T Consensus 88 s~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 167 (362)
T 3goz_A 88 SGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPA 167 (362)
T ss_dssp CSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCT
T ss_pred cCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCc
Confidence 999988766654 3344 789999999999885544443 33 3689999999998885333 3344443
Q ss_pred -cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccc----cChhhhhccccCccE
Q 039925 179 -LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGT----ITLGIKKLIFVNLYA 253 (549)
Q Consensus 179 -L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~~~L~~ 253 (549)
|++|++++|++++..+..+...+. ...++|+.|++++|.+++. ++..+.... ++|+.
T Consensus 168 ~L~~L~Ls~n~l~~~~~~~l~~~l~-----------------~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~-~~L~~ 229 (362)
T 3goz_A 168 NVNSLNLRGNNLASKNCAELAKFLA-----------------SIPASVTSLDLSANLLGLKSYAELAYIFSSIP-NHVVS 229 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHH-----------------TSCTTCCEEECTTSCGGGSCHHHHHHHHHHSC-TTCCE
T ss_pred cccEeeecCCCCchhhHHHHHHHHH-----------------hCCCCCCEEECCCCCCChhHHHHHHHHHhcCC-CCceE
Confidence 899999999888666655542111 1113799999999999863 444555530 58999
Q ss_pred EEcCCCcccccCCCcCccccCCccccCeeeccCcccccc-------CCccccCCCCCCEEEccCCccccc
Q 039925 254 LTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGN-------LPSSLGYYQNLMELSVSRNKLSAS 316 (549)
Q Consensus 254 L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~-------~p~~l~~l~~L~~L~Ls~N~l~~~ 316 (549)
|+|++|.+++..+..+...+..+++|+.|+|++|.+.+. ++..+..+++|+.||+++|++...
T Consensus 230 L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 230 LNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp EECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred EECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 999999998654333445567889999999999985432 334677888999999999998865
No 78
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=3.4e-25 Score=231.48 Aligned_cols=296 Identities=15% Similarity=0.098 Sum_probs=192.0
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccc-cCCC----CCCEeecccccccc----cCCcccccccCccceeeeccccc
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKV-GRLF----RLEYLLLANNHFSG----KIPANLSHCSNLLTKLFICETHL 118 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~----~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~~L~Ls~n~l 118 (549)
.++..+..+++|++|+|++|.+++..+..+ ..++ +|++|+|++|.++. .+|..+..+++| ++|++++|.+
T Consensus 47 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L-~~L~Ls~n~i 125 (461)
T 1z7x_W 47 DISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTL-QELHLSDNLL 125 (461)
T ss_dssp HHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTC-CEEECCSSBC
T ss_pred HHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCce-eEEECCCCcC
Confidence 455667777788888888887765333322 2344 58888888887773 456777777787 8888888877
Q ss_pred ccccccc-----cCCCCCCCEEEeecceeeee----CCccccCCCCCCEEecccCcceeccccccc-----ccc-cceee
Q 039925 119 SGQLLDF-----IGNPSAIQVMIFKENSLEGK----FPNTLSNLRSLFYDNINRNEFSGLIPSFIF-----NIS-LKWNF 183 (549)
Q Consensus 119 ~~~~~~~-----~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-----~l~-L~~L~ 183 (549)
+...+.. +...++|++|++++|.++.. ++..+..+++|++|++++|.+....+..+. ..+ |++|+
T Consensus 126 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~ 205 (461)
T 1z7x_W 126 GDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALK 205 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEE
T ss_pred chHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEE
Confidence 6543332 22356788888888877753 345566678888888888887654443333 244 88888
Q ss_pred CCCCcCccc----CchhhhhcCCCCcEeeeccc-cccc------c-cccCcccccEEEccccccccc----cChhhhhcc
Q 039925 184 LPENSFTGN----LPLEIGVTLPKGRNYYILLL-AQKL------Y-WSDVSTTATIIAMGGNQISGT----ITLGIKKLI 247 (549)
Q Consensus 184 l~~n~l~~~----~p~~~~~~l~~L~~L~l~~~-~~~l------~-~l~~~~~L~~L~l~~n~l~~~----~~~~~~~l~ 247 (549)
+++|.++.. ++..+. .+++|+.|+++++ +... . .....++|+.|++++|.++.. ++..+..+
T Consensus 206 L~~n~l~~~~~~~l~~~l~-~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~- 283 (461)
T 1z7x_W 206 LESCGVTSDNCRDLCGIVA-SKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK- 283 (461)
T ss_dssp CTTSCCBTTHHHHHHHHHH-HCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC-
T ss_pred ccCCCCcHHHHHHHHHHHH-hCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC-
Confidence 888887753 455554 7788888888773 1111 0 111245888888888888764 56666677
Q ss_pred ccCccEEEcCCCcccccCCCcCccccC-CccccCeeeccCcccccc----CCccccCCCCCCEEEccCCcccccC-----
Q 039925 248 FVNLYALTMVKNKLSGPIPHHIASSLG-NLTLLTYLALDNNKLQGN----LPSSLGYYQNLMELSVSRNKLSASL----- 317 (549)
Q Consensus 248 ~~~L~~L~L~~n~l~~~~p~~l~~~l~-~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~----- 317 (549)
++|++|++++|.+++..+..+...+. ..++|++|++++|.+++. ++..+..+++|+.|++++|.+++..
T Consensus 284 -~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 284 -ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp -TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred -CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 88888888888886543211222222 236888888888888754 4566777888888888888886431
Q ss_pred -------CCC---CCCCCCCc-----ccCCcc--cccccceeeecCCC
Q 039925 318 -------PPL---NSQHNHSF-----SCPGFE--FSVIKLEFQIPGNK 348 (549)
Q Consensus 318 -------p~~---~ls~N~~~-----~ip~~~--~~~l~l~~~~~gn~ 348 (549)
+.. ++++|+++ .+|..+ +..+.. +++.+|+
T Consensus 363 ~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~-L~l~~N~ 409 (461)
T 1z7x_W 363 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE-LDLSNNC 409 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE-EECCSSS
T ss_pred HHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE-EECCCCC
Confidence 111 77788766 556554 333332 5666665
No 79
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=8.1e-23 Score=201.90 Aligned_cols=227 Identities=13% Similarity=0.113 Sum_probs=176.6
Q ss_pred CCCCEEEccCCcceec-CCc--cccCCCCCCEeecccccccccCCccc--ccccCccceeeecccccccccc----cccC
Q 039925 57 GYLRFINLVDNNFRGE-IPE--KVGRLFRLEYLLLANNHFSGKIPANL--SHCSNLLTKLFICETHLSGQLL----DFIG 127 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~-~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~~L~Ls~n~l~~~~~----~~~~ 127 (549)
..++.|.+.++.++.. +.. .+..+++|++|++++|.+++..|..+ ..+++| ++|++++|.+++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L-~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLAL-SSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCC-SSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCC-CEEEeecccccchhhhhHHHHhh
Confidence 4578888888777532 111 12345779999999999998888888 889999 999999999987544 3456
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceec--c--cccccccc-cceeeCCCCcCcccCchh---hhh
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGL--I--PSFIFNIS-LKWNFLPENSFTGNLPLE---IGV 199 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~-L~~L~l~~n~l~~~~p~~---~~~ 199 (549)
.+++|++|+|++|.+.+..+..|..+++|++|+|++|++.+. + +..+..++ |++|++++|+++ .++.. +..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 789999999999999988888999999999999999997652 2 23346778 999999999997 33332 221
Q ss_pred cCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhcc-ccCccEEEcCCCcccccCCCcCccccCCccc
Q 039925 200 TLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLI-FVNLYALTMVKNKLSGPIPHHIASSLGNLTL 278 (549)
Q Consensus 200 ~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~ 278 (549)
.+ ++|++|++++|.+++..|..+..+. .++|++|+|++|+++ .+| ..+. ++
T Consensus 222 ~l---------------------~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp----~~~~--~~ 273 (310)
T 4glp_A 222 AG---------------------VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVP----KGLP--AK 273 (310)
T ss_dssp HT---------------------CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCC----SCCC--SC
T ss_pred cC---------------------CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chh----hhhc--CC
Confidence 22 3788899999999988777666551 159999999999998 564 3332 79
Q ss_pred cCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 279 LTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 279 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
|++|+|++|++++ +|. +..+++|+.|++++|+++.
T Consensus 274 L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 274 LRVLDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred CCEEECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 9999999999995 444 6788999999999999874
No 80
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=1.1e-22 Score=197.05 Aligned_cols=179 Identities=21% Similarity=0.194 Sum_probs=115.1
Q ss_pred cCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCC
Q 039925 126 IGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKG 204 (549)
Q Consensus 126 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L 204 (549)
+..+++|++|++++|.+++ + ..+..+++|++|++++|.+++..+..+..++ |++|++++|.+++..+..+. .+
T Consensus 59 l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l--- 132 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFD-KL--- 132 (272)
T ss_dssp GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT-TC---
T ss_pred cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhc-cC---
Confidence 3344444444444444442 1 2344444455555555444444444444444 55555555555422222222 22
Q ss_pred cEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeec
Q 039925 205 RNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLAL 284 (549)
Q Consensus 205 ~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~L 284 (549)
++|++|++++|.+++..+..+..+ ++|+.|++++|++++.. +..+..+++|++|++
T Consensus 133 ------------------~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L 188 (272)
T 3rfs_A 133 ------------------TNLTYLNLAHNQLQSLPKGVFDKL--TNLTELDLSYNQLQSLP----EGVFDKLTQLKDLRL 188 (272)
T ss_dssp ------------------TTCCEEECCSSCCCCCCTTTTTTC--TTCCEEECCSSCCCCCC----TTTTTTCTTCCEEEC
T ss_pred ------------------CCCCEEECCCCccCccCHHHhccC--ccCCEEECCCCCcCccC----HHHhcCCccCCEEEC
Confidence 256666777777776666667788 99999999999998543 456789999999999
Q ss_pred cCccccccCCccccCCCCCCEEEccCCcccccCCCC---CCCCCC-CcccCCcc
Q 039925 285 DNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPL---NSQHNH-SFSCPGFE 334 (549)
Q Consensus 285 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~---~ls~N~-~~~ip~~~ 334 (549)
++|++++..+..+..+++|+.|++++|.+++..|.. +++.|. .+.+|..+
T Consensus 189 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 189 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGBBCTT
T ss_pred CCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHHHHHHHHHHhCCCcccCcc
Confidence 999999877778899999999999999999887754 444444 45666644
No 81
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.9e-22 Score=191.55 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=94.9
Q ss_pred CCCCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCcc
Q 039925 29 DLCQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLL 108 (549)
Q Consensus 29 ~~c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 108 (549)
+||.|.|+.|.. ..++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|
T Consensus 3 ~Cp~~~gC~C~~-----------------~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L- 61 (251)
T 3m19_A 3 TCETVTGCTCNE-----------------GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKL- 61 (251)
T ss_dssp -CHHHHSSEEEG-----------------GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTC-
T ss_pred cCCCCCceEcCC-----------------CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccC-
Confidence 467888988843 2346777777777 6665554 567777777777776666667777777
Q ss_pred ceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCC
Q 039925 109 TKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPEN 187 (549)
Q Consensus 109 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n 187 (549)
++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..++ |++|++++|
T Consensus 62 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 141 (251)
T 3m19_A 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCC
Confidence 7777777777766666677777777777777777755556667777777777777777654444455555 555555555
Q ss_pred cCc
Q 039925 188 SFT 190 (549)
Q Consensus 188 ~l~ 190 (549)
.++
T Consensus 142 ~l~ 144 (251)
T 3m19_A 142 QLQ 144 (251)
T ss_dssp CCC
T ss_pred cCC
Confidence 555
No 82
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.88 E-value=2.1e-24 Score=225.49 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=40.8
Q ss_pred cccEEEccccccccc----cChhhhhccccCccEEEcCCCcccccCCCcCccccCC-ccccCeeeccCccccc----cCC
Q 039925 224 TATIIAMGGNQISGT----ITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGN-LTLLTYLALDNNKLQG----NLP 294 (549)
Q Consensus 224 ~L~~L~l~~n~l~~~----~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~-l~~L~~L~Ls~N~l~~----~~p 294 (549)
+|+.|++++|.+++. ++..+..+ ++|+.|++++|.+++..+..+...+.. .++|++|+|++|++++ .+|
T Consensus 314 ~L~~L~L~~n~l~~~~~~~l~~~l~~~--~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 391 (461)
T 1z7x_W 314 QLESLWVKSCSFTAACCSHFSSVLAQN--RFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 391 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHC--SSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred cceeeEcCCCCCchHHHHHHHHHHhhC--CCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHH
Confidence 455555555555433 23334444 555555555555543321111111211 3455555555555553 344
Q ss_pred ccccCCCCCCEEEccCCccc
Q 039925 295 SSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 295 ~~l~~l~~L~~L~Ls~N~l~ 314 (549)
..+..+++|+.|++++|+++
T Consensus 392 ~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 392 ATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHCCCCCEEECCSSSCC
T ss_pred HHHHhCCCccEEECCCCCCC
Confidence 44555555555555555554
No 83
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=199.03 Aligned_cols=204 Identities=15% Similarity=0.132 Sum_probs=169.1
Q ss_pred CCCCCEEEccCCcceecCCccc--cCCCCCCEeecccccccccCC----cccccccCccceeeecccccccccccccCCC
Q 039925 56 FGYLRFINLVDNNFRGEIPEKV--GRLFRLEYLLLANNHFSGKIP----ANLSHCSNLLTKLFICETHLSGQLLDFIGNP 129 (549)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l 129 (549)
+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++| ++|++++|.+++..+..|+.+
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L-~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGL-KVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCC-CEEEEECCSSCCCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCC-CEEEeeCCCcchhhHHHhccC
Confidence 4679999999999999999888 899999999999999997655 345679999 999999999998888999999
Q ss_pred CCCCEEEeecceeeee--C--CccccCCCCCCEEecccCcceecccc----cccccc-cceeeCCCCcCcccCchhhhhc
Q 039925 130 SAIQVMIFKENSLEGK--F--PNTLSNLRSLFYDNINRNEFSGLIPS----FIFNIS-LKWNFLPENSFTGNLPLEIGVT 200 (549)
Q Consensus 130 ~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~n~l~~~~p~----~~~~l~-L~~L~l~~n~l~~~~p~~~~~~ 200 (549)
++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+..++ |++|++++|.+++..|..+. .
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~-~ 246 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP-R 246 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS-S
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH-h
Confidence 9999999999998642 2 3345789999999999999973 232 356778 99999999999977677665 2
Q ss_pred CCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccC
Q 039925 201 LPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLT 280 (549)
Q Consensus 201 l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~ 280 (549)
+. ..++|++|++++|+++ .+|..+. ++|+.|+|++|++++ +| . +..+++|+
T Consensus 247 ~~------------------~~~~L~~L~Ls~N~l~-~lp~~~~----~~L~~L~Ls~N~l~~-~~----~-~~~l~~L~ 297 (310)
T 4glp_A 247 CM------------------WSSALNSLNLSFAGLE-QVPKGLP----AKLRVLDLSSNRLNR-AP----Q-PDELPEVD 297 (310)
T ss_dssp CC------------------CCTTCCCEECCSSCCC-SCCSCCC----SCCSCEECCSCCCCS-CC----C-TTSCCCCS
T ss_pred cc------------------CcCcCCEEECCCCCCC-chhhhhc----CCCCEEECCCCcCCC-Cc----h-hhhCCCcc
Confidence 21 1248999999999999 5666553 799999999999984 22 2 57789999
Q ss_pred eeeccCccccc
Q 039925 281 YLALDNNKLQG 291 (549)
Q Consensus 281 ~L~Ls~N~l~~ 291 (549)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999974
No 84
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=1.7e-23 Score=209.15 Aligned_cols=217 Identities=14% Similarity=0.137 Sum_probs=132.6
Q ss_pred CCEEEccCCcceecCCccccCC--CCCCEeecccccccccCCcccccccCccceeeecccccccc-cccccCCCCCCCEE
Q 039925 59 LRFINLVDNNFRGEIPEKVGRL--FRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQ-LLDFIGNPSAIQVM 135 (549)
Q Consensus 59 L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~-~~~~~~~l~~L~~L 135 (549)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++| ++|++++|.+++. ++..+..+++|++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L-~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRV-QHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCC-CEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCC-CEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 567778777766 3455556 7788888888888754444 5567788 8888888887655 67777778888888
Q ss_pred EeecceeeeeCCccccCCCCCCEEecccC-ccee-cccccccccc-cceeeCCCC-cCccc-CchhhhhcCC-CCcEeee
Q 039925 136 IFKENSLEGKFPNTLSNLRSLFYDNINRN-EFSG-LIPSFIFNIS-LKWNFLPEN-SFTGN-LPLEIGVTLP-KGRNYYI 209 (549)
Q Consensus 136 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~-~~p~~~~~l~-L~~L~l~~n-~l~~~-~p~~~~~~l~-~L~~L~l 209 (549)
++++|.+++..+..+..+++|++|++++| .+++ .++..+..++ |++|++++| .+++. ++..+. .++ +|++|++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~-~l~~~L~~L~l 202 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA-HVSETITQLNL 202 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH-HSCTTCCEEEC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH-hcccCCCEEEe
Confidence 88888877667777777888888888887 5654 2556667777 888888888 77643 344444 555 5554444
Q ss_pred cccc---c--cc-ccccCcccccEEEccccc-cccccChhhhhccccCccEEEcCCCc-ccccCCCcCccccCCccccCe
Q 039925 210 LLLA---Q--KL-YWSDVSTTATIIAMGGNQ-ISGTITLGIKKLIFVNLYALTMVKNK-LSGPIPHHIASSLGNLTLLTY 281 (549)
Q Consensus 210 ~~~~---~--~l-~~l~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~~~L~~L~L~~n~-l~~~~p~~l~~~l~~l~~L~~ 281 (549)
+++- . .+ ..+...++|+.|++++|. +++..+..+..+ ++|+.|++++|. +.... ...+..+++|++
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l--~~L~~L~l~~~~~~~~~~----~~~l~~~~~L~~ 276 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL--NYLQHLSLSRCYDIIPET----LLELGEIPTLKT 276 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC--TTCCEEECTTCTTCCGGG----GGGGGGCTTCCE
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC--CCCCEeeCCCCCCCCHHH----HHHHhcCCCCCE
Confidence 4321 0 00 011122345555555555 444444455555 555555555553 11100 113445555555
Q ss_pred eeccCc
Q 039925 282 LALDNN 287 (549)
Q Consensus 282 L~Ls~N 287 (549)
|++++|
T Consensus 277 L~l~~~ 282 (336)
T 2ast_B 277 LQVFGI 282 (336)
T ss_dssp EECTTS
T ss_pred EeccCc
Confidence 555555
No 85
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.6e-21 Score=192.20 Aligned_cols=194 Identities=19% Similarity=0.299 Sum_probs=109.4
Q ss_pred cCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCC
Q 039925 54 GNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQ 133 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~ 133 (549)
.++++|++|++++|.++ .+| .+..+++|++|+|++|.++ .++. +..+++| ++|++++|.+++. ..+..+++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L-~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKI-TELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSC-CEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCC-CEEEccCCcCCCc--hhhcCCCCCC
Confidence 34566666666666666 344 4666666666666666666 3333 6666666 6666666666542 2455666666
Q ss_pred EEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccc
Q 039925 134 VMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLA 213 (549)
Q Consensus 134 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~ 213 (549)
+|++++|.+++ ++. +..+++|++|++++|.+.+..+ +..++
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~----------------------------------- 151 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLT----------------------------------- 151 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCT-----------------------------------
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCC-----------------------------------
Confidence 66666666653 222 5556666666666665553222 44444
Q ss_pred cccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccC
Q 039925 214 QKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNL 293 (549)
Q Consensus 214 ~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (549)
+|+.|++++|.+++..+ +..+ ++|+.|++++|.+++ + +. +..+++|++|+|++|++++.
T Consensus 152 ----------~L~~L~l~~n~l~~~~~--l~~l--~~L~~L~l~~n~l~~-~----~~-l~~l~~L~~L~L~~N~l~~~- 210 (308)
T 1h6u_A 152 ----------NLQYLSIGNAQVSDLTP--LANL--SKLTTLKADDNKISD-I----SP-LASLPNLIEVHLKNNQISDV- 210 (308)
T ss_dssp ----------TCCEEECCSSCCCCCGG--GTTC--TTCCEEECCSSCCCC-C----GG-GGGCTTCCEEECTTSCCCBC-
T ss_pred ----------CccEEEccCCcCCCChh--hcCC--CCCCEEECCCCccCc-C----hh-hcCCCCCCEEEccCCccCcc-
Confidence 34444444444443222 4445 566666666666652 2 11 55666666666666666633
Q ss_pred CccccCCCCCCEEEccCCcccc
Q 039925 294 PSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
+ .+..+++|+.|++++|++++
T Consensus 211 ~-~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 211 S-PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp G-GGTTCTTCCEEEEEEEEEEC
T ss_pred c-cccCCCCCCEEEccCCeeec
Confidence 2 25666666666666666654
No 86
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=3.7e-23 Score=209.00 Aligned_cols=236 Identities=14% Similarity=0.075 Sum_probs=182.7
Q ss_pred EEEccCCcceecCCccccCCCCCCEeecccccccccCC----ccccccc-CccceeeecccccccccccccCCC-----C
Q 039925 61 FINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIP----ANLSHCS-NLLTKLFICETHLSGQLLDFIGNP-----S 130 (549)
Q Consensus 61 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~~L~Ls~n~l~~~~~~~~~~l-----~ 130 (549)
++++++|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +| ++|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L-~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASV-TSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTC-CEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCce-eEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 47899999998888888777789999999999996555 6778888 89 999999999998777776664 9
Q ss_pred CCCEEEeecceeeeeCCcc----ccCC-CCCCEEecccCcceeccccccc----c-cc-cceeeCCCCcCcccCchhhhh
Q 039925 131 AIQVMIFKENSLEGKFPNT----LSNL-RSLFYDNINRNEFSGLIPSFIF----N-IS-LKWNFLPENSFTGNLPLEIGV 199 (549)
Q Consensus 131 ~L~~L~L~~n~l~~~~p~~----~~~l-~~L~~L~L~~n~l~~~~p~~~~----~-l~-L~~L~l~~n~l~~~~p~~~~~ 199 (549)
+|++|+|++|.+++..+.. +..+ ++|++|+|++|.+++..+..+. . .+ |++|++++|.++......+..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999998665554 4444 8999999999999876665543 3 24 999999999998655544431
Q ss_pred cCCCCcEeeecccccccccccCcccccEEEccccccccccChhhh----hccccCccEEEcCCCcccccCCCcCccccCC
Q 039925 200 TLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIK----KLIFVNLYALTMVKNKLSGPIPHHIASSLGN 275 (549)
Q Consensus 200 ~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~----~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~ 275 (549)
.+. ...++|++|++++|.+++..+..+. .. .++|+.|+|++|.+++.....++..+..
T Consensus 161 ~l~-----------------~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~-~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 161 ILA-----------------AIPANVNSLNLRGNNLASKNCAELAKFLASI-PASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp HHH-----------------TSCTTCCEEECTTSCGGGSCHHHHHHHHHTS-CTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred HHh-----------------cCCccccEeeecCCCCchhhHHHHHHHHHhC-CCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 111 1123799999999999877665443 33 0389999999999986433334556665
Q ss_pred -ccccCeeeccCccccccCC----ccccCCCCCCEEEccCCcccc
Q 039925 276 -LTLLTYLALDNNKLQGNLP----SSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 276 -l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
.++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+++
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTT
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccc
Confidence 4599999999999986443 345778999999999999553
No 87
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=8.2e-22 Score=182.82 Aligned_cols=182 Identities=15% Similarity=0.200 Sum_probs=141.4
Q ss_pred CCCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccc
Q 039925 30 LCQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLT 109 (549)
Q Consensus 30 ~c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 109 (549)
.|.|.+|.|+.. +++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++| +
T Consensus 6 ~C~~~~v~c~~~--~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~ 79 (208)
T 2o6s_A 6 SCSGTTVECYSQ--GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL-T 79 (208)
T ss_dssp EEETTEEECCSS--CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC-C
T ss_pred EECCCEEEecCC--Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCc-C
Confidence 378999999753 222 455544 4589999999999996666678899999999999999995555567889999 9
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCc
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENS 188 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~ 188 (549)
+|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..++ |++|++++|.
T Consensus 80 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 80 YLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 999999999977777788999999999999999866666688899999999999998866666677777 8888888887
Q ss_pred CcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhc
Q 039925 189 FTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKL 246 (549)
Q Consensus 189 l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l 246 (549)
+.+..| +|+.|+++.|++++.+|..+..+
T Consensus 160 ~~~~~~-----------------------------~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 160 WDCTCP-----------------------------GIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp BCCCTT-----------------------------TTHHHHHHHHHCTTTBBCTTSSB
T ss_pred eecCCC-----------------------------CHHHHHHHHHhCCceeeccCccc
Confidence 663221 45556666666666666655544
No 88
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=4.9e-22 Score=210.37 Aligned_cols=208 Identities=18% Similarity=0.256 Sum_probs=152.9
Q ss_pred CCCCCCCCCCCC-----CCCcc-eeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccc
Q 039925 20 VTSSWSNSIDLC-----QWRGV-TCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHF 93 (549)
Q Consensus 20 ~~~~w~~~~~~c-----~w~gv-~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l 93 (549)
.+.+|..+.++| .|.|+ .|.. .+|+.|+|++|++++ +|..+. ++|++|+|++|+|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~----------------~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l 92 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI----------------NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNAL 92 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH----------------TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCC
T ss_pred HHHHHhccCCccccccchhhhcccccc----------------CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCC
Confidence 355687666778 68888 5742 268999999999995 887663 8899999999999
Q ss_pred cccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceeccccc
Q 039925 94 SGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSF 173 (549)
Q Consensus 94 ~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 173 (549)
+ .+| ..+++| ++|++++|+|++ +|. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|.
T Consensus 93 ~-~ip---~~l~~L-~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~- 157 (571)
T 3cvr_A 93 I-SLP---ELPASL-EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE- 157 (571)
T ss_dssp S-CCC---CCCTTC-CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-
T ss_pred c-ccc---cccCCC-CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-
Confidence 9 788 457888 999999999987 666 655 89999999999985 666 68899999999999885 554
Q ss_pred ccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCc-
Q 039925 174 IFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNL- 251 (549)
Q Consensus 174 ~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L- 251 (549)
.++ |++|++++|.+++ +|. +. ++|+.|+|++|.|+ .+|. +. .+|
T Consensus 158 --~l~~L~~L~Ls~N~L~~-lp~-l~------------------------~~L~~L~Ls~N~L~-~lp~-~~----~~L~ 203 (571)
T 3cvr_A 158 --LPTSLEVLSVRNNQLTF-LPE-LP------------------------ESLEALDVSTNLLE-SLPA-VP----VRNH 203 (571)
T ss_dssp --CCTTCCEEECCSSCCSC-CCC-CC------------------------TTCCEEECCSSCCS-SCCC-CC--------
T ss_pred --cCCCcCEEECCCCCCCC-cch-hh------------------------CCCCEEECcCCCCC-chhh-HH----Hhhh
Confidence 455 8888888888874 554 32 26777777777777 4444 32 244
Q ss_pred ------cEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCC
Q 039925 252 ------YALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYY 300 (549)
Q Consensus 252 ------~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 300 (549)
+.|+|++|.|+ .+ |..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 204 ~~~~~L~~L~Ls~N~l~-~l----p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 204 HSEETEIFFRCRENRIT-HI----PENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp ----CCEEEECCSSCCC-CC----CGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cccccceEEecCCCcce-ec----CHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 77777777776 23 4555567777777777777776666665543
No 89
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=2.8e-21 Score=183.30 Aligned_cols=189 Identities=18% Similarity=0.196 Sum_probs=130.1
Q ss_pred cCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccc-cccccccccCCCCCCCEEEeec-ceeeeeCCcc
Q 039925 72 EIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETH-LSGQLLDFIGNPSAIQVMIFKE-NSLEGKFPNT 149 (549)
Q Consensus 72 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~ 149 (549)
.+|. +. ++|++|++++|++++..+..|..+++| ++|++++|. ++...+..|.++++|++|++++ |.+++..+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L-~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNI-SRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTC-CEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCC-cEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 4555 33 367777777777774444466667777 777777775 6655555666667777777766 6666555556
Q ss_pred ccCCCCCCEEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEE
Q 039925 150 LSNLRSLFYDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIA 229 (549)
Q Consensus 150 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~ 229 (549)
|.++++|++|++++|.+++ +|. +. .+++|+ .|+.|+
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~------------------------~l~~L~------------------~L~~L~ 136 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LT------------------------KVYSTD------------------IFFILE 136 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CT------------------------TCCBCC------------------SEEEEE
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cc------------------------cccccc------------------cccEEE
Confidence 6666666666666666653 332 22 222211 244777
Q ss_pred cccc-ccccccChhhhhccccCcc-EEEcCCCcccccCCCcCccccCCccccCeeeccCcc-ccccCCccccCC-CCCCE
Q 039925 230 MGGN-QISGTITLGIKKLIFVNLY-ALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNK-LQGNLPSSLGYY-QNLME 305 (549)
Q Consensus 230 l~~n-~l~~~~~~~~~~l~~~~L~-~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~ 305 (549)
+++| .++...+..|..+ ++|+ .|++++|.++ .+| +..+.. ++|++|++++|+ +++..+..|..+ ++|+.
T Consensus 137 l~~N~~l~~i~~~~~~~l--~~L~~~L~l~~n~l~-~i~---~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~ 209 (239)
T 2xwt_C 137 ITDNPYMTSIPVNAFQGL--CNETLTLKLYNNGFT-SVQ---GYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSL 209 (239)
T ss_dssp EESCTTCCEECTTTTTTT--BSSEEEEECCSCCCC-EEC---TTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSE
T ss_pred CCCCcchhhcCcccccch--hcceeEEEcCCCCCc-ccC---HhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcE
Confidence 7777 7776666677888 9999 9999999998 554 234444 899999999995 996667789999 99999
Q ss_pred EEccCCcccc
Q 039925 306 LSVSRNKLSA 315 (549)
Q Consensus 306 L~Ls~N~l~~ 315 (549)
|++++|++++
T Consensus 210 L~l~~N~l~~ 219 (239)
T 2xwt_C 210 LDVSQTSVTA 219 (239)
T ss_dssp EECTTCCCCC
T ss_pred EECCCCcccc
Confidence 9999999985
No 90
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=1.1e-20 Score=180.49 Aligned_cols=180 Identities=17% Similarity=0.175 Sum_probs=125.3
Q ss_pred CCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEe
Q 039925 81 FRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDN 160 (549)
Q Consensus 81 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (549)
...++++++++.++ .+|..+. +.+ +.|++++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l-~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 89 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADT-EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTC-CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCC-CEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEE
Confidence 34677888888887 6776654 466 7888888888777777777778888888888877766666677777777777
Q ss_pred cccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccccc
Q 039925 161 INRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTI 239 (549)
Q Consensus 161 L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~ 239 (549)
|++|.+++..+..|..++ |++|++++|.++ +..
T Consensus 90 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~----------------------------------------------~~~ 123 (251)
T 3m19_A 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLK----------------------------------------------SLP 123 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------------------------------CCC
T ss_pred CCCCcccccChhHhcccCCCCEEEcCCCcCC----------------------------------------------CcC
Confidence 777777755555555555 555555555544 333
Q ss_pred ChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccccc
Q 039925 240 TLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSAS 316 (549)
Q Consensus 240 ~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 316 (549)
+..+..+ ++|+.|+|++|++++.. +..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++.
T Consensus 124 ~~~~~~l--~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 124 SGVFDRL--TKLKELRLNTNQLQSIP----AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTC--TTCCEEECCSSCCCCCC----TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred hhHhccC--CcccEEECcCCcCCccC----HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 3444555 67777777777776322 34567777888888888888765566777788888888888887753
No 91
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=5.2e-21 Score=180.07 Aligned_cols=167 Identities=17% Similarity=0.198 Sum_probs=145.2
Q ss_pred CCCCCCCCCCCCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcc
Q 039925 21 TSSWSNSIDLCQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPAN 100 (549)
Q Consensus 21 ~~~w~~~~~~c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 100 (549)
...|......|+|.+|.|+.. ++ +.+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|+...+..
T Consensus 9 ~~~~~~~~~~Cs~~~v~c~~~--~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 83 (229)
T 3e6j_A 9 HSAACPSQCSCSGTTVDCRSK--RH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGV 83 (229)
T ss_dssp --CCCCTTCEEETTEEECTTS--CC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred hhccCCCCCEEeCCEeEccCC--Cc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhh
Confidence 345666778999999999753 33 36676554 89999999999999888899999999999999999998544456
Q ss_pred cccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-c
Q 039925 101 LSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-L 179 (549)
Q Consensus 101 l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L 179 (549)
|..+++| ++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+..+..|..++ |
T Consensus 84 ~~~l~~L-~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 161 (229)
T 3e6j_A 84 FDSLTQL-TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161 (229)
T ss_dssp TTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cccCCCc-CEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCC
Confidence 7899999 99999999999888888999999999999999999 8899999999999999999999977777889998 9
Q ss_pred ceeeCCCCcCcccCc
Q 039925 180 KWNFLPENSFTGNLP 194 (549)
Q Consensus 180 ~~L~l~~n~l~~~~p 194 (549)
+.|++++|.+....+
T Consensus 162 ~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 162 THAYLFGNPWDCECR 176 (229)
T ss_dssp CEEECTTSCBCTTBG
T ss_pred CEEEeeCCCccCCcc
Confidence 999999999985543
No 92
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=1e-22 Score=207.70 Aligned_cols=230 Identities=13% Similarity=0.120 Sum_probs=173.4
Q ss_pred EccCCcceecCCccccCCCCCCEeecccccccccCC----cccccccCccceeeecccc---ccccccccc-------CC
Q 039925 63 NLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIP----ANLSHCSNLLTKLFICETH---LSGQLLDFI-------GN 128 (549)
Q Consensus 63 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~~L~Ls~n~---l~~~~~~~~-------~~ 128 (549)
.++...+. .++..+..+++|++|+|++|.++...+ ..+..+++| ++|+|++|. +++.+|..+ ..
T Consensus 15 ~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L-~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~ 92 (386)
T 2ca6_A 15 AITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDL-EIAEFSDIFTGRVKDEIPEALRLLLQALLK 92 (386)
T ss_dssp SCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTC-CEEECCSCCTTSCGGGSHHHHHHHHHHHTT
T ss_pred CCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCc-cEEeCcccccCccccchhHHHHHHHHHHhh
Confidence 33333444 577888899999999999999986533 447789999 999999964 444555544 78
Q ss_pred CCCCCEEEeecceeee----eCCccccCCCCCCEEecccCcceecccccc----ccc---------c-cceeeCCCCcCc
Q 039925 129 PSAIQVMIFKENSLEG----KFPNTLSNLRSLFYDNINRNEFSGLIPSFI----FNI---------S-LKWNFLPENSFT 190 (549)
Q Consensus 129 l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l---------~-L~~L~l~~n~l~ 190 (549)
+++|++|+|++|.++. .+|..+..+++|++|+|++|.+....+..+ ..+ + |++|++++|+++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 9999999999999986 477788899999999999999875444433 333 6 999999999987
Q ss_pred c-cCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccc-----ccChhhhhccccCccEEEcCCCccccc
Q 039925 191 G-NLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISG-----TITLGIKKLIFVNLYALTMVKNKLSGP 264 (549)
Q Consensus 191 ~-~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~-----~~~~~~~~l~~~~L~~L~L~~n~l~~~ 264 (549)
. .++. +...+ ...++|+.|++++|.++. ..+..+..+ ++|+.|+|++|.++..
T Consensus 173 ~~~~~~-l~~~l------------------~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~--~~L~~L~Ls~n~l~~~ 231 (386)
T 2ca6_A 173 NGSMKE-WAKTF------------------QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC--QELKVLDLQDNTFTHL 231 (386)
T ss_dssp GGGHHH-HHHHH------------------HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC--TTCCEEECCSSCCHHH
T ss_pred cHHHHH-HHHHH------------------HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC--CCccEEECcCCCCCcH
Confidence 3 3332 11011 112378899999999873 233477788 9999999999999621
Q ss_pred CCCcCccccCCccccCeeeccCcccccc----CCcccc--CCCCCCEEEccCCcccc
Q 039925 265 IPHHIASSLGNLTLLTYLALDNNKLQGN----LPSSLG--YYQNLMELSVSRNKLSA 315 (549)
Q Consensus 265 ~p~~l~~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~--~l~~L~~L~Ls~N~l~~ 315 (549)
....+|..+..+++|++|+|++|.+++. ++..+. .+++|+.|+|++|.+++
T Consensus 232 g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 232 GSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 1113367888999999999999999865 566664 38999999999999986
No 93
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=1.8e-21 Score=194.46 Aligned_cols=237 Identities=14% Similarity=0.115 Sum_probs=186.9
Q ss_pred CccccCC--CCCCEEEccCCcceecCCccccCCCCCCEeeccccccccc-CCcccccccCccceeeeccccccccccccc
Q 039925 50 TPHVGNF--GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGK-IPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 50 p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
|..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++| ++|++++|.+++..+..+
T Consensus 61 ~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L-~~L~L~~~~l~~~~~~~l 138 (336)
T 2ast_B 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL-QNLSLEGLRLSDPIVNTL 138 (336)
T ss_dssp HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCC-SEEECTTCBCCHHHHHHH
T ss_pred HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCC-CEEeCcCcccCHHHHHHH
Confidence 3455666 8999999999999966554 66799999999999999865 78888999999 999999999988888899
Q ss_pred CCCCCCCEEEeecc-eeee-eCCccccCCCCCCEEecccC-cceec-ccccccccc--cceeeCCCC--cCc-ccCchhh
Q 039925 127 GNPSAIQVMIFKEN-SLEG-KFPNTLSNLRSLFYDNINRN-EFSGL-IPSFIFNIS--LKWNFLPEN--SFT-GNLPLEI 197 (549)
Q Consensus 127 ~~l~~L~~L~L~~n-~l~~-~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~--L~~L~l~~n--~l~-~~~p~~~ 197 (549)
+.+++|++|++++| .+++ .++..+..+++|++|++++| .+++. ++..+..++ |++|++++| .++ +.++..+
T Consensus 139 ~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~ 218 (336)
T 2ast_B 139 AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLV 218 (336)
T ss_dssp TTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHH
T ss_pred hcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHH
Confidence 99999999999999 6775 36677888999999999999 88754 566677665 999999999 555 3566655
Q ss_pred hhcCCCCcEeeecccc----cccccccCcccccEEEccccc-cccccChhhhhccccCccEEEcCCCcccccCCCcCccc
Q 039925 198 GVTLPKGRNYYILLLA----QKLYWSDVSTTATIIAMGGNQ-ISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASS 272 (549)
Q Consensus 198 ~~~l~~L~~L~l~~~~----~~l~~l~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~ 272 (549)
. .+++|+.|+++++. ..+..+...++|+.|++++|. +.......+..+ ++|+.|++++| ++ ...
T Consensus 219 ~-~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~--~~L~~L~l~~~-i~-------~~~ 287 (336)
T 2ast_B 219 R-RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEI--PTLKTLQVFGI-VP-------DGT 287 (336)
T ss_dssp H-HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGC--TTCCEEECTTS-SC-------TTC
T ss_pred h-hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcC--CCCCEEeccCc-cC-------HHH
Confidence 5 89999999998832 223444555799999999995 433333367778 99999999999 44 233
Q ss_pred cCCc-cccCeeeccCccccccCCccccC
Q 039925 273 LGNL-TLLTYLALDNNKLQGNLPSSLGY 299 (549)
Q Consensus 273 l~~l-~~L~~L~Ls~N~l~~~~p~~l~~ 299 (549)
+..+ .+|..|++++|++++..|..++.
T Consensus 288 ~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 288 LQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp HHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHHHhhCcceEEecccCccccCCcccc
Confidence 4444 34888889999999888876654
No 94
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.83 E-value=2.6e-21 Score=188.58 Aligned_cols=148 Identities=20% Similarity=0.264 Sum_probs=108.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------Cc-e----------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------KW-T----------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~----------------------------------~g~~~~~~~ 430 (549)
...++|...+.||+|+||.||+|++.+ +. + +|+|.+
T Consensus 10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 86 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE--- 86 (299)
T ss_dssp CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee---
Confidence 345678888999999999999999753 11 1 788887
Q ss_pred CCCceEEEEEeecCCCCcccccccCC-------CCCCCCCCchhhhHHHHHHHHHHHHHhh-------------------
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSN-------NKLKPSSLSMIRKLSTTIDVASAIEYLR------------------- 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~-------~~~~~~~l~~~~~~~ia~~va~gl~yLH------------------- 484 (549)
++..++|||||++|+|.++|+... .......++|.++++|+.|||+||+|||
T Consensus 87 --~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 87 --GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN 164 (299)
T ss_dssp --SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred --CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC
Confidence 788999999999999999997542 1123457999999999999999999999
Q ss_pred ------------------------------------------------------------c--cccCCc-----ceeeec
Q 039925 485 ------------------------------------------------------------V--KMALPE-----KVMEIV 497 (549)
Q Consensus 485 ------------------------------------------------------------~--~~~~~~-----~~~~~~ 497 (549)
. ...+.+ ....+.
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 244 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 244 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 0 000000 001111
Q ss_pred cCcccchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhh
Q 039925 498 ESSLLLEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENV 544 (549)
Q Consensus 498 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~ 544 (549)
.....+.+..|+.++.+++.+||+.+|++||||.||++.|+++.+..
T Consensus 245 ~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 245 QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 11122223567888999999999999999999999999999987643
No 95
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.83 E-value=3.5e-21 Score=187.78 Aligned_cols=143 Identities=22% Similarity=0.331 Sum_probs=107.7
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..+++...+.||+|+||+||+|++.+... +|+|.. +..+
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~~~ 107 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DNLA 107 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSCE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------CeEE
Confidence 45678888899999999999999865422 677754 5679
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh---------------------------------
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR--------------------------------- 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH--------------------------------- 484 (549)
+|||||++|+|.++|+... ..++|.++++|+.|||+||+|||
T Consensus 108 iVmEy~~gGsL~~~l~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEEECCSSCBHHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEEcCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 9999999999999998654 46999999999999999999999
Q ss_pred --------------------------------------------------ccccCCc-----ceeeec-----cCcccch
Q 039925 485 --------------------------------------------------VKMALPE-----KVMEIV-----ESSLLLE 504 (549)
Q Consensus 485 --------------------------------------------------~~~~~~~-----~~~~~~-----~~~~~~~ 504 (549)
....+.+ .+..++ .+.+...
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~ 262 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKL 262 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTS
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccc
Confidence 0000000 000000 0111111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhhc
Q 039925 505 IEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVAC 546 (549)
Q Consensus 505 ~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~~ 546 (549)
+.+|+.++.+++.+||+.+|++||||.||++.|+.++..++.
T Consensus 263 ~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 245778899999999999999999999999999999876653
No 96
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.82 E-value=2.7e-21 Score=189.29 Aligned_cols=142 Identities=23% Similarity=0.248 Sum_probs=104.5
Q ss_pred cccCcCCCccccCceecEEEEEeCC------Cc-e-----------------------------------eEEEeccccC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE------KW-T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~-----------------------------------~g~~~~~~~~ 431 (549)
.+++...+.||+|+||.||+|++.+ +. | +|+|..
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---- 100 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK---- 100 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE----
Confidence 3445566789999999999999843 11 1 788887
Q ss_pred CCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh-----------------
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR----------------- 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH----------------- 484 (549)
.+..++|||||++|+|.++|+..... .....++|.++++|+.|||+||+|||
T Consensus 101 -~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 101 -DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY 179 (308)
T ss_dssp -SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence 78899999999999999999754310 01246899999999999999999999
Q ss_pred --------------------------------------------------------------c--cccCCc----c-eee
Q 039925 485 --------------------------------------------------------------V--KMALPE----K-VME 495 (549)
Q Consensus 485 --------------------------------------------------------------~--~~~~~~----~-~~~ 495 (549)
. ...+.+ . ...
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~ 259 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 0 000110 0 111
Q ss_pred eccCcccchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q 039925 496 IVESSLLLEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHA 540 (549)
Q Consensus 496 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~ 540 (549)
+.+....+.+.+|+.++.+++.+||+.+|++||+|.||++.|+.+
T Consensus 260 i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111122223367888999999999999999999999999999865
No 97
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=1.4e-19 Score=181.82 Aligned_cols=225 Identities=18% Similarity=0.143 Sum_probs=168.5
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccc-cccCCCCCCCE-EEe
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLL-DFIGNPSAIQV-MIF 137 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~-~~~~~l~~L~~-L~L 137 (549)
++++-++++++ .+|..+ .+++++|+|++|+|+...+..|.++++| ++|+|++|++.+.+| ..|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L-~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDL-EKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTC-CEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCC-CEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 46778888998 888776 3689999999999994334578999999 999999999876555 57899998875 667
Q ss_pred ecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCC-CcCcccCchhhhhcCCCCcEeeecccccc
Q 039925 138 KENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPE-NSFTGNLPLEIGVTLPKGRNYYILLLAQK 215 (549)
Q Consensus 138 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~-n~l~~~~p~~~~~~l~~L~~L~l~~~~~~ 215 (549)
+.|+++...|..|..+++|++|++++|++....+..+.... +..|++.+ +.+. .++...+.
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~---------------- 150 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFV---------------- 150 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSST----------------
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchh----------------
Confidence 78999988889999999999999999999866665665555 88888865 4555 45543221
Q ss_pred cccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCc
Q 039925 216 LYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPS 295 (549)
Q Consensus 216 l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~ 295 (549)
.....++.|++++|+++.. +...... .+|+.|++++|+..+.+| +..|..+++|++|+|++|+|+ .+|.
T Consensus 151 ----~~~~~l~~L~L~~N~i~~i-~~~~f~~--~~L~~l~l~~~n~l~~i~---~~~f~~l~~L~~LdLs~N~l~-~lp~ 219 (350)
T 4ay9_X 151 ----GLSFESVILWLNKNGIQEI-HNSAFNG--TQLDELNLSDNNNLEELP---NDVFHGASGPVILDISRTRIH-SLPS 219 (350)
T ss_dssp ----TSBSSCEEEECCSSCCCEE-CTTSSTT--EEEEEEECTTCTTCCCCC---TTTTTTEECCSEEECTTSCCC-CCCS
T ss_pred ----hcchhhhhhccccccccCC-Chhhccc--cchhHHhhccCCcccCCC---HHHhccCcccchhhcCCCCcC-ccCh
Confidence 1223688899999999854 4444445 689999998644444665 467899999999999999999 5654
Q ss_pred cccCCCCCCEEEccCCcccccCC
Q 039925 296 SLGYYQNLMELSVSRNKLSASLP 318 (549)
Q Consensus 296 ~l~~l~~L~~L~Ls~N~l~~~~p 318 (549)
. .+.+|+.|.+.++.--..+|
T Consensus 220 ~--~~~~L~~L~~l~~~~l~~lP 240 (350)
T 4ay9_X 220 Y--GLENLKKLRARSTYNLKKLP 240 (350)
T ss_dssp S--SCTTCCEEECTTCTTCCCCC
T ss_pred h--hhccchHhhhccCCCcCcCC
Confidence 2 35667777765544333344
No 98
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.82 E-value=7.3e-21 Score=188.02 Aligned_cols=147 Identities=21% Similarity=0.309 Sum_probs=109.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------Cc-e----------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------KW-T----------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~----------------------------------~g~~~~~~~ 430 (549)
...++|...+.||+|+||.||+|++++ +. + +|+|.+
T Consensus 38 i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 114 (329)
T 4aoj_A 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE--- 114 (329)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE---
Confidence 345678888899999999999999853 21 1 788887
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCC---------CCCCCCchhhhHHHHHHHHHHHHHhh-----------------
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNK---------LKPSSLSMIRKLSTTIDVASAIEYLR----------------- 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~---------~~~~~l~~~~~~~ia~~va~gl~yLH----------------- 484 (549)
.+..++|||||++|+|.++|+..... ....+++|.++++|+.|||+||+|||
T Consensus 115 --~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 115 --GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 192 (329)
T ss_dssp --SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred --CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence 78899999999999999999865310 12356999999999999999999999
Q ss_pred -------------------------------ccccCCc------------------ceeeec------------------
Q 039925 485 -------------------------------VKMALPE------------------KVMEIV------------------ 497 (549)
Q Consensus 485 -------------------------------~~~~~~~------------------~~~~~~------------------ 497 (549)
...+.|+ .+.+++
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 272 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 0000000 001111
Q ss_pred --cCcccchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhh
Q 039925 498 --ESSLLLEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHAREN 543 (549)
Q Consensus 498 --~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~ 543 (549)
.....+.+..|+.++.+++.+||+.+|++||||.||++.|+.+.+.
T Consensus 273 i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1111122356778899999999999999999999999999998753
No 99
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=4.8e-20 Score=172.30 Aligned_cols=155 Identities=15% Similarity=0.227 Sum_probs=139.4
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccce
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTK 110 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~ 110 (549)
|.|..|.|+.. +++ .+|..+. ++|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|..+++| ++
T Consensus 11 C~~~~v~c~~~--~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L-~~ 84 (220)
T 2v9t_B 11 CSNNIVDCRGK--GLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL-NS 84 (220)
T ss_dssp EETTEEECTTS--CCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC-CE
T ss_pred ECCCEEEcCCC--CcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC-CE
Confidence 68999999753 333 5676654 689999999999997777799999999999999999998889999999999 99
Q ss_pred eeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcC
Q 039925 111 LFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSF 189 (549)
Q Consensus 111 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l 189 (549)
|+|++|.++...+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..|..++ |++|++++|.+
T Consensus 85 L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 85 LVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred EECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99999999977777899999999999999999988889999999999999999999988888899998 99999999998
Q ss_pred cc
Q 039925 190 TG 191 (549)
Q Consensus 190 ~~ 191 (549)
..
T Consensus 165 ~c 166 (220)
T 2v9t_B 165 IC 166 (220)
T ss_dssp EC
T ss_pred CC
Confidence 74
No 100
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.4e-19 Score=167.50 Aligned_cols=158 Identities=16% Similarity=0.255 Sum_probs=139.9
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCC-ccccCCCCCCEeecccccccccCCcccccccCccc
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIP-EKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLT 109 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 109 (549)
|.|..+.|+.. +++ .+|..+. +.+++|+|++|.|++..| ..|..+++|++|+|++|+|++..+..|..+++| +
T Consensus 11 C~~~~l~~s~n--~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L-~ 84 (220)
T 2v70_A 11 CEGTTVDCSNQ--KLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV-N 84 (220)
T ss_dssp EETTEEECCSS--CCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTC-C
T ss_pred ECCCEeEeCCC--Ccc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCC-C
Confidence 68999999753 333 5777664 457899999999997655 468999999999999999997777789999999 9
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCc
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENS 188 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~ 188 (549)
+|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..++ |+.|++++|.
T Consensus 85 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 85 EILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp EEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 999999999988888999999999999999999988899999999999999999999988899999999 9999999999
Q ss_pred CcccCc
Q 039925 189 FTGNLP 194 (549)
Q Consensus 189 l~~~~p 194 (549)
+....+
T Consensus 165 l~c~c~ 170 (220)
T 2v70_A 165 FNCNCY 170 (220)
T ss_dssp EECSGG
T ss_pred CcCCCc
Confidence 986554
No 101
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=2.3e-19 Score=166.28 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=77.7
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..+..+++| ++|++++|++++..+..|..+++|++|++++
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSL-TQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTC-SEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccC-cEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 45666777666 555443 3467777777777774444456667777 7777777777655555666677777777777
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCc
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
|.+++..+..|..+++|++|++++|++.+..+..+..++ |++|++++|.++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 776644444556666666666666666644444444444 444444444444
No 102
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.79 E-value=6.7e-19 Score=173.40 Aligned_cols=131 Identities=21% Similarity=0.294 Sum_probs=110.9
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+| .+..+++|++|+|++|.++ .++. +..+++|++|+|++|.+++ ++ .+..+++| ++|++++|.+++.. .+.
T Consensus 55 ~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L-~~L~l~~n~l~~~~--~l~ 126 (308)
T 1h6u_A 55 TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSI-KTLDLTSTQITDVT--PLA 126 (308)
T ss_dssp CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTC-CEEECTTSCCCCCG--GGT
T ss_pred Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCC-CEEECCCCCCCCch--hhc
Confidence 355 6889999999999999999 4555 9999999999999999984 44 68999999 99999999998643 389
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCc
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
.+++|++|++++|.+++. +. +..+++|++|++++|.+++..+ +..++ |+.|++++|.++
T Consensus 127 ~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 127 GLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp TCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 999999999999999854 43 8899999999999999985433 66666 777777777776
No 103
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.78 E-value=1.1e-19 Score=178.02 Aligned_cols=82 Identities=20% Similarity=0.272 Sum_probs=67.7
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEEEe
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
.++...+.||+|+||.||+|++.+..+ +|+|...+ ......+||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEEEec
Confidence 356778899999999999999976555 67776511 01135799999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||++|+|.++|+.. .++|..+++++.|+|+||+|||
T Consensus 82 y~~~gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH 117 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLH 117 (303)
T ss_dssp CCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999864 4899999999999999999998
No 104
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.4e-19 Score=177.68 Aligned_cols=181 Identities=21% Similarity=0.252 Sum_probs=148.0
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCcccc-CCCCCCEeecccccccccCCcccccccCccc
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVG-RLFRLEYLLLANNHFSGKIPANLSHCSNLLT 109 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 109 (549)
|.+..+.|... +++ .+|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++| +
T Consensus 18 C~~~~l~c~~~--~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L-~ 91 (361)
T 2xot_A 18 CASNILSCSKQ--QLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNL-R 91 (361)
T ss_dssp EETTEEECCSS--CCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTC-C
T ss_pred ECCCEEEeCCC--CcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCC-C
Confidence 57888888653 333 5676654 4689999999999977777787 99999999999999997777789999999 9
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccc---cccc-cceeeCC
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFI---FNIS-LKWNFLP 185 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~---~~l~-L~~L~l~ 185 (549)
+|+|++|+++...+..|..+++|++|+|++|.++...|..|..+++|++|+|++|+++...+..| ..++ |+.|+|+
T Consensus 92 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~ 171 (361)
T 2xot_A 92 YLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLS 171 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECC
T ss_pred EEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECC
Confidence 99999999998888899999999999999999998889999999999999999999996555555 5677 9999999
Q ss_pred CCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccc
Q 039925 186 ENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISG 237 (549)
Q Consensus 186 ~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~ 237 (549)
+|+++ .+|......++++ .++.|++++|.+.-
T Consensus 172 ~N~l~-~l~~~~~~~l~~~-------------------~l~~l~l~~N~~~C 203 (361)
T 2xot_A 172 SNKLK-KLPLTDLQKLPAW-------------------VKNGLYLHNNPLEC 203 (361)
T ss_dssp SSCCC-CCCHHHHHHSCHH-------------------HHTTEECCSSCEEC
T ss_pred CCCCC-ccCHHHhhhccHh-------------------hcceEEecCCCccC
Confidence 99999 5554433233321 24678888888763
No 105
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=5.1e-20 Score=201.84 Aligned_cols=185 Identities=18% Similarity=0.131 Sum_probs=107.8
Q ss_pred hhHHHHHHHHhhcCCC-CCCCCCCCC-CCCCCCCCcceeCCCCCceE---------eecCccccCCCCCCEEEccCCcce
Q 039925 2 TDHLALLAIKSLLHDR-RGVTSSWSN-SIDLCQWRGVTCTHQHQRIN---------KCLTPHVGNFGYLRFINLVDNNFR 70 (549)
Q Consensus 2 ~~~~~l~~~~~~~~~~-~~~~~~w~~-~~~~c~w~gv~c~~~~~~v~---------g~lp~~~~~l~~L~~L~L~~n~l~ 70 (549)
.++++|+++..++... ...-..|.. ....+.|.++.++.. +++ ..+|..+ |+.++|+.|.|.
T Consensus 132 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~l~L~~n~~~~~~~~~-----l~~l~Ls~~~i~ 204 (727)
T 4b8c_D 132 CTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTP--LTPKIELFANGKDEANQAL-----LQHKKLSQYSID 204 (727)
T ss_dssp CCCHHHHHHHHHHHHHHTTC------------------------------------------------------------
T ss_pred cchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCC--ccceEEeeCCCCCcchhhH-----hhcCccCccccc
Confidence 3568888888776421 123345633 335677887776542 111 1122222 333444444333
Q ss_pred e---------cCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecce
Q 039925 71 G---------EIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENS 141 (549)
Q Consensus 71 ~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 141 (549)
+ ..|+.|..+++|+.|+|++|.+. .+|..++.+++| ++|+|++|.|+ .+|..|+++++|++|+|++|.
T Consensus 205 ~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 205 EDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL-TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC-SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred CccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC-CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 2 45677888888888888888888 788888888888 88888888888 777888888888888888888
Q ss_pred eeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhh
Q 039925 142 LEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIG 198 (549)
Q Consensus 142 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~ 198 (549)
|+ .+|..|+.+++|++|+|++|.++ .+|..|..++ |++|+|++|.+++.+|..+.
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 88 77888888888888888888886 6777788888 88888888888877776664
No 106
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.5e-18 Score=175.05 Aligned_cols=178 Identities=15% Similarity=0.158 Sum_probs=147.4
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccc-cccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLS-HCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
++++++++.++ .+|..+. +.++.|+|++|+|++..+..+. .+++| ++|+|++|+|++..+..|.++++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L-~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNL-HSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhccccc-CEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 57899999999 6887664 4689999999999966666676 89999 999999999998888899999999999999
Q ss_pred cceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccc
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLY 217 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~ 217 (549)
+|+++...+..|..+++|++|+|++|++.+..|..|..++ |++|+|++|.++ .+|..++..+.
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~--------------- 160 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGN--------------- 160 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC------------------
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcc---------------
Confidence 9999987778899999999999999999988889999999 999999999998 56665431111
Q ss_pred cccCcccccEEEccccccccccChhhhhccccC--ccEEEcCCCccc
Q 039925 218 WSDVSTTATIIAMGGNQISGTITLGIKKLIFVN--LYALTMVKNKLS 262 (549)
Q Consensus 218 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~--L~~L~L~~n~l~ 262 (549)
..++|+.|+|++|.++...+..+..+ +. ++.|+|++|.+.
T Consensus 161 ---~l~~L~~L~L~~N~l~~l~~~~~~~l--~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 161 ---KLPKLMLLDLSSNKLKKLPLTDLQKL--PAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ----CTTCCEEECCSSCCCCCCHHHHHHS--CHHHHTTEECCSSCEE
T ss_pred ---cCCcCCEEECCCCCCCccCHHHhhhc--cHhhcceEEecCCCcc
Confidence 12367888888888886655667766 55 477888888776
No 107
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=4.7e-20 Score=198.75 Aligned_cols=253 Identities=10% Similarity=0.033 Sum_probs=122.9
Q ss_pred cCCCCCCEEEccCCcceec----CCccccCCCCCCEeeccccccc----ccCCcccccccCccceeeecccccccccccc
Q 039925 54 GNFGYLRFINLVDNNFRGE----IPEKVGRLFRLEYLLLANNHFS----GKIPANLSHCSNLLTKLFICETHLSGQLLDF 125 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~----~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~ 125 (549)
.++++|++|+|++|.+++. ++..+..+++|++|++++|.++ +.++..+..+++| ++|++++|.+.+ ++..
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L-~~L~L~~~~~~~-l~~~ 238 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSL-VSVKVGDFEILE-LVGF 238 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTC-CEEECSSCBGGG-GHHH
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCC-cEEeccCccHHH-HHHH
Confidence 3567777777777776544 3334455667777777777665 2333344556666 777777666543 2233
Q ss_pred cCCCCCCCEEEeeccee--------------------------eeeCCccccCCCCCCEEecccCcceeccc-cccc---
Q 039925 126 IGNPSAIQVMIFKENSL--------------------------EGKFPNTLSNLRSLFYDNINRNEFSGLIP-SFIF--- 175 (549)
Q Consensus 126 ~~~l~~L~~L~L~~n~l--------------------------~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~--- 175 (549)
+..+++|++|+++.+.. ...+|..+..+++|++|++++|.+++... ..+.
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~ 318 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCP 318 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCT
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCc
Confidence 33333333333321100 01223334444555555555555432211 1122
Q ss_pred ---------------------ccc-cceeeCC-----------CCcCcccCchhhhhcCCCCcEeeecc-cccc--cccc
Q 039925 176 ---------------------NIS-LKWNFLP-----------ENSFTGNLPLEIGVTLPKGRNYYILL-LAQK--LYWS 219 (549)
Q Consensus 176 ---------------------~l~-L~~L~l~-----------~n~l~~~~p~~~~~~l~~L~~L~l~~-~~~~--l~~l 219 (549)
.++ |++|+++ .|.+++.....+...+++|++|++.. .+.. +..+
T Consensus 319 ~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l 398 (592)
T 3ogk_B 319 NLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESI 398 (592)
T ss_dssp TCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHH
T ss_pred CCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHH
Confidence 333 5555554 23333222222222455555555522 1110 0011
Q ss_pred -cCcccccEEEcc----ccccccc-----cChhhhhccccCccEEEcCCCc--ccccCCCcCcccc-CCccccCeeeccC
Q 039925 220 -DVSTTATIIAMG----GNQISGT-----ITLGIKKLIFVNLYALTMVKNK--LSGPIPHHIASSL-GNLTLLTYLALDN 286 (549)
Q Consensus 220 -~~~~~L~~L~l~----~n~l~~~-----~~~~~~~l~~~~L~~L~L~~n~--l~~~~p~~l~~~l-~~l~~L~~L~Ls~ 286 (549)
...++|+.|+++ .|.+++. ++..+..+ ++|+.|+++.|. +++.. +..+ ..+++|++|+|++
T Consensus 399 ~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~--~~L~~L~L~~~~~~l~~~~----~~~~~~~~~~L~~L~L~~ 472 (592)
T 3ogk_B 399 GTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGC--KKLRRFAFYLRQGGLTDLG----LSYIGQYSPNVRWMLLGY 472 (592)
T ss_dssp HHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHC--TTCCEEEEECCGGGCCHHH----HHHHHHSCTTCCEEEECS
T ss_pred HhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhC--CCCCEEEEecCCCCccHHH----HHHHHHhCccceEeeccC
Confidence 113466677664 4555542 22334555 667777775432 44322 1122 2356677777777
Q ss_pred cccccc-CCccccCCCCCCEEEccCCccc
Q 039925 287 NKLQGN-LPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 287 N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
|++++. ++..+..+++|+.|++++|.++
T Consensus 473 n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 473 VGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred CCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 776642 3444456677777777777665
No 108
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.76 E-value=1.8e-19 Score=179.61 Aligned_cols=148 Identities=15% Similarity=0.174 Sum_probs=107.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-------e------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-------T------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|++.+.. + +|+|...
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 34678888999999999999999875421 1 6777651
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh--------------
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR-------------- 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH-------------- 484 (549)
....++|||||++|+|.++|+..... .....++|.+++.|+.|||+||+|||
T Consensus 141 ----~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI 216 (353)
T 4ase_A 141 ----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216 (353)
T ss_dssp ----TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred ----CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence 35689999999999999999754310 11346899999999999999999999
Q ss_pred -----------------------------------------------------------------c--cccCCc-----c
Q 039925 485 -----------------------------------------------------------------V--KMALPE-----K 492 (549)
Q Consensus 485 -----------------------------------------------------------------~--~~~~~~-----~ 492 (549)
. ...+++ .
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~ 296 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 0 000111 0
Q ss_pred eeeeccCc-ccchHHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhh
Q 039925 493 VMEIVESS-LLLEIEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHAREN 543 (549)
Q Consensus 493 ~~~~~~~~-~~~~~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~ 543 (549)
+...+..+ .+..+..++.++.+++.+||+.||++||||.||++.|+.+.+.
T Consensus 297 ~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 01111111 1112245778899999999999999999999999999988654
No 109
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=3.3e-18 Score=166.99 Aligned_cols=172 Identities=21% Similarity=0.334 Sum_probs=90.8
Q ss_pred cCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCC
Q 039925 78 GRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLF 157 (549)
Q Consensus 78 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 157 (549)
..+++|++|++++|.+. .++ .+..+++| ++|++++|++++..+ +..+++|++|++++|.+++ ++ .+..+++|+
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L-~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQ-GIQYLPNV-TKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTC-CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhcCcccEEEccCCCcc-cCh-hHhcCCCC-CEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 34555555555555555 233 25555555 555555555554333 5555555555555555552 22 255555555
Q ss_pred EEecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccccc
Q 039925 158 YDNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISG 237 (549)
Q Consensus 158 ~L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~ 237 (549)
+|++++|.+.+. ..+..++ +|+.|++++|.+++
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~---------------------------------------------~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLP---------------------------------------------QLESLYLGNNKITD 148 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCT---------------------------------------------TCCEEECCSSCCCC
T ss_pred EEECCCCcCCCC--hhhcCCC---------------------------------------------CCCEEEccCCcCCc
Confidence 555555555431 2233333 34444444444443
Q ss_pred ccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 238 TITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 238 ~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
. ..+..+ ++|+.|++++|.+++.. . +..+++|++|++++|.+++ ++ .+..+++|+.|++++|+++.
T Consensus 149 ~--~~l~~l--~~L~~L~L~~N~l~~~~-----~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 149 I--TVLSRL--TKLDTLSLEDNQISDIV-----P-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp C--GGGGGC--TTCSEEECCSSCCCCCG-----G-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred c--hhhccC--CCCCEEEccCCccccch-----h-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 2 334445 66666666666665321 2 5566666666666666663 33 36666666666666666653
No 110
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=3.2e-18 Score=167.10 Aligned_cols=127 Identities=17% Similarity=0.260 Sum_probs=107.5
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAI 132 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L 132 (549)
+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++ ++. +..+++| ++|++++|.+++. + .+..+++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L-~~L~l~~n~l~~~-~-~l~~l~~L 114 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNL-GWLFLDENKVKDL-S-SLKDLKKL 114 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTC-CEEECCSSCCCCG-G-GGTTCTTC
T ss_pred hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCC-CEEECCCCcCCCC-h-hhccCCCC
Confidence 457889999999999998 555 48899999999999999995 554 8999999 9999999999863 3 49999999
Q ss_pred CEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCc
Q 039925 133 QVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 133 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
++|++++|.+++ + ..+..+++|++|++++|.+++. ..+..++ |++|++++|.++
T Consensus 115 ~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 115 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred CEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 999999999985 3 5788999999999999999854 4566666 777777777766
No 111
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=5e-18 Score=181.59 Aligned_cols=172 Identities=18% Similarity=0.272 Sum_probs=111.6
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAI 132 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L 132 (549)
+..+++|+.|++++|.+. .+| .|..+++|+.|+|++|.+++ ++. +..+++| +.|+|++|.+.+. ..+..+++|
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~~l~~L-~~L~Ls~N~l~~l--~~l~~l~~L 111 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LTNLKNL-GWLFLDENKIKDL--SSLKDLKKL 111 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCC-CGG-GGGCTTC-CEEECCSSCCCCC--TTSTTCTTC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCC-Chh-hccCCCC-CEEECcCCCCCCC--hhhccCCCC
Confidence 445667777777777776 444 46777777777777777774 333 6777777 7777777777642 256777777
Q ss_pred CEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecc
Q 039925 133 QVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILL 211 (549)
Q Consensus 133 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~ 211 (549)
++|+|++|.+.+ + ..+..+++|+.|+|++|.+.+. ..+..++ |+.|+|++|.+++..| +. .+
T Consensus 112 ~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~-~l---------- 174 (605)
T 1m9s_A 112 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA-GL---------- 174 (605)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GT-TC----------
T ss_pred CEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hc-cC----------
Confidence 777777777763 2 3467777777777777777643 4566666 7777777777764333 22 22
Q ss_pred cccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccc
Q 039925 212 LAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSG 263 (549)
Q Consensus 212 ~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~ 263 (549)
++|+.|+|++|.+++. ..+..+ ++|+.|+|++|.+.+
T Consensus 175 -----------~~L~~L~Ls~N~i~~l--~~l~~l--~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 175 -----------TKLQNLYLSKNHISDL--RALAGL--KNLDVLELFSQECLN 211 (605)
T ss_dssp -----------TTCCEEECCSSCCCBC--GGGTTC--TTCSEEECCSEEEEC
T ss_pred -----------CCCCEEECcCCCCCCC--hHHccC--CCCCEEEccCCcCcC
Confidence 2455666666666543 245555 666666666666653
No 112
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.75 E-value=3.3e-18 Score=181.06 Aligned_cols=193 Identities=21% Similarity=0.279 Sum_probs=153.5
Q ss_pred CcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeee
Q 039925 34 RGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFI 113 (549)
Q Consensus 34 ~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~L 113 (549)
..+.++. .++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +| ++|++
T Consensus 62 ~~L~Ls~--n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L-~~L~L 127 (571)
T 3cvr_A 62 SELQLNR--LNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SL-KHLDV 127 (571)
T ss_dssp SEEECCS--SCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TC-CEEEC
T ss_pred cEEEeCC--CCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CC-CEEEC
Confidence 3455543 34554 887663 89999999999999 788 457999999999999995 887 665 88 99999
Q ss_pred cccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCccc
Q 039925 114 CETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGN 192 (549)
Q Consensus 114 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~ 192 (549)
++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. |. + |++|++++|.++ .
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~ 194 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-S 194 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-S
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-c
Confidence 9999997 555 68999999999999995 676 67899999999999996 666 55 6 999999999999 7
Q ss_pred CchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccc
Q 039925 193 LPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASS 272 (549)
Q Consensus 193 ~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~ 272 (549)
+|. +.. +|. ...+.|+.|+|++|.|+ .+|..+..+ ++|+.|+|++|.+++.+ |..
T Consensus 195 lp~-~~~---~L~--------------~~~~~L~~L~Ls~N~l~-~lp~~l~~l--~~L~~L~L~~N~l~~~~----p~~ 249 (571)
T 3cvr_A 195 LPA-VPV---RNH--------------HSEETEIFFRCRENRIT-HIPENILSL--DPTCTIILEDNPLSSRI----RES 249 (571)
T ss_dssp CCC-CC-------------------------CCEEEECCSSCCC-CCCGGGGGS--CTTEEEECCSSSCCHHH----HHH
T ss_pred hhh-HHH---hhh--------------cccccceEEecCCCcce-ecCHHHhcC--CCCCEEEeeCCcCCCcC----HHH
Confidence 776 441 110 11224599999999999 578888888 99999999999999876 455
Q ss_pred cCCccc
Q 039925 273 LGNLTL 278 (549)
Q Consensus 273 l~~l~~ 278 (549)
+..++.
T Consensus 250 l~~l~~ 255 (571)
T 3cvr_A 250 LSQQTA 255 (571)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 555443
No 113
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=4.5e-18 Score=181.99 Aligned_cols=191 Identities=20% Similarity=0.293 Sum_probs=146.8
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEE
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMI 136 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 136 (549)
..+..+.+..+.+....+ +..+++|+.|++++|.+. .+| .+..+++| +.|+|++|.+++..+ +..+++|+.|+
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L-~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNV-TKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTC-CEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCC-CEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 345556666676664433 567889999999999998 455 58889999 999999999987655 88899999999
Q ss_pred eecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccc
Q 039925 137 FKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQK 215 (549)
Q Consensus 137 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~ 215 (549)
|++|.+.+ +| .+..+++|++|+|++|.+.+. ..+..++ |+.|+|++|.+++ + ..+. .
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l-~~l~-~--------------- 151 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I-TVLS-R--------------- 151 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCC-C-GGGG-S---------------
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCC-c-hhhc-c---------------
Confidence 99999984 44 688899999999999998853 4577778 8999999888874 2 2222 2
Q ss_pred cccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCcccccc
Q 039925 216 LYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGN 292 (549)
Q Consensus 216 l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~ 292 (549)
+++|+.|+|++|.+.+..| +..+ ++|+.|+|++|.+++ + ..+..+++|+.|+|++|.+.+.
T Consensus 152 ------l~~L~~L~Ls~N~l~~~~~--l~~l--~~L~~L~Ls~N~i~~-l-----~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 152 ------LTKLDTLSLEDNQISDIVP--LAGL--TKLQNLYLSKNHISD-L-----RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp ------CTTCSEEECCSSCCCCCGG--GTTC--TTCCEEECCSSCCCB-C-----GGGTTCTTCSEEECCSEEEECC
T ss_pred ------cCCCCEEECcCCcCCCchh--hccC--CCCCEEECcCCCCCC-C-----hHHccCCCCCEEEccCCcCcCC
Confidence 2367788888888886655 7777 888888888888874 2 2477888888888888888743
No 114
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.73 E-value=1.5e-17 Score=155.26 Aligned_cols=152 Identities=14% Similarity=0.149 Sum_probs=131.2
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+.++++++.++ .+|..+. ++|+.|+|++|+|++..+..|..+++| ++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L-~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKL-RRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTC-CEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCC-CEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 47889999998 7887665 789999999999997666789999999 9999999999988899999999999999999
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccccc
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYW 218 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~ 218 (549)
|.++...+..|..+++|++|+|++|++.+..|..|..++ |++|++++|.+++..+..+. .++
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~---------------- 152 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS-PLR---------------- 152 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT-TCT----------------
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh-CCC----------------
Confidence 999965556688999999999999999988899999999 99999999999954443343 333
Q ss_pred ccCcccccEEEcccccccc
Q 039925 219 SDVSTTATIIAMGGNQISG 237 (549)
Q Consensus 219 l~~~~~L~~L~l~~n~l~~ 237 (549)
+|+.|++++|.+..
T Consensus 153 -----~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 153 -----AIQTMHLAQNPFIC 166 (220)
T ss_dssp -----TCCEEECCSSCEEC
T ss_pred -----CCCEEEeCCCCcCC
Confidence 67778888888764
No 115
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.73 E-value=1.6e-17 Score=155.09 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=134.3
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCC-cccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIP-ANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
+.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++| ++|+|++|.+++..+..|.++++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L-~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQL-RKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCC-CEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 48999999998 6887664 457999999999996645 458899999 999999999998888899999999999999
Q ss_pred cceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccc
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLY 217 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~ 217 (549)
+|.+++..+..|..+++|++|+|++|++.+..|..|..++ |++|++++|++++..|..+. .++
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~--------------- 153 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD-TLH--------------- 153 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT-TCT---------------
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc-CCC---------------
Confidence 9999977777899999999999999999988899999999 99999999999966676654 333
Q ss_pred cccCcccccEEEccccccccccC
Q 039925 218 WSDVSTTATIIAMGGNQISGTIT 240 (549)
Q Consensus 218 ~l~~~~~L~~L~l~~n~l~~~~~ 240 (549)
+|+.|++++|.+....+
T Consensus 154 ------~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 154 ------SLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ------TCCEEECCSCCEECSGG
T ss_pred ------CCCEEEecCcCCcCCCc
Confidence 67788888898875433
No 116
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=6.2e-18 Score=154.37 Aligned_cols=135 Identities=21% Similarity=0.266 Sum_probs=112.9
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCc-cccCCCCCCEeecccccccccCCcccccccCccc
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPE-KVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLT 109 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 109 (549)
|.|+.+.|+.. ++ +.+|..+.. +|++|+|++|.|++..+. .|..+++|++|+|++|.|++..|..|..+++| +
T Consensus 8 C~~~~l~~s~~--~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~ 81 (192)
T 1w8a_A 8 CEGTTVDCTGR--GL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI-Q 81 (192)
T ss_dssp EETTEEECTTS--CC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC-C
T ss_pred ECCCEEEcCCC--Cc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccC-C
Confidence 68888988753 33 467776544 889999999999855554 48889999999999999997778889999999 9
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceeccc
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIP 171 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 171 (549)
+|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+.+..+
T Consensus 82 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999999998888889999999999999999998888889999999999999998886544
No 117
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=1.7e-19 Score=191.76 Aligned_cols=190 Identities=14% Similarity=0.131 Sum_probs=118.7
Q ss_pred CCCCCCEeecccccccccCCcccccccCccceeeecccc-------------cccccccccCCCCCCCEEE-eecc----
Q 039925 79 RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETH-------------LSGQLLDFIGNPSAIQVMI-FKEN---- 140 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~-------------l~~~~~~~~~~l~~L~~L~-L~~n---- 140 (549)
.+++|+.|+|++|+++ .+|..++.+++| +.|++++|. +.+.+|..++.+++|+.|+ ++.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L-~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKEL-QELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHH-HHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHH-HHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 3444555555555554 445555555555 555544443 3334444455555555554 3333
Q ss_pred ---------eeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec
Q 039925 141 ---------SLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 141 ---------~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~ 210 (549)
.++. +|. ..|+.|+|++|.+++ +|. +..++ |+.|++++|.++ .+|..+. .++
T Consensus 425 L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~-------- 486 (567)
T 1dce_A 425 LRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA-ALR-------- 486 (567)
T ss_dssp HHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG-GCT--------
T ss_pred hhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh-cCC--------
Confidence 3331 111 247778888887774 555 77777 888888888877 6777665 333
Q ss_pred ccccccccccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCcccc
Q 039925 211 LLAQKLYWSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQ 290 (549)
Q Consensus 211 ~~~~~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (549)
+|+.|+|++|.+++ +| .+..+ ++|+.|+|++|.+++... |..++.+++|+.|+|++|.++
T Consensus 487 -------------~L~~L~Ls~N~l~~-lp-~l~~l--~~L~~L~Ls~N~l~~~~~---p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 487 -------------CLEVLQASDNALEN-VD-GVANL--PRLQELLLCNNRLQQSAA---IQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp -------------TCCEEECCSSCCCC-CG-GGTTC--SSCCEEECCSSCCCSSST---TGGGGGCTTCCEEECTTSGGG
T ss_pred -------------CCCEEECCCCCCCC-Cc-ccCCC--CCCcEEECCCCCCCCCCC---cHHHhcCCCCCEEEecCCcCC
Confidence 57777777888875 45 67777 888888888888875430 467788888888888888888
Q ss_pred ccCCc---cccCCCCCCEEEc
Q 039925 291 GNLPS---SLGYYQNLMELSV 308 (549)
Q Consensus 291 ~~~p~---~l~~l~~L~~L~L 308 (549)
+..|. .+..+++|+.|++
T Consensus 547 ~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 547 QEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GSSSCTTHHHHHCTTCSEEEC
T ss_pred CCccHHHHHHHHCcccCccCC
Confidence 55432 2344788888864
No 118
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.4e-17 Score=152.83 Aligned_cols=154 Identities=14% Similarity=0.171 Sum_probs=127.0
Q ss_pred ccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCC
Q 039925 53 VGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAI 132 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L 132 (549)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ . +..+..+++| ++|++++|.+++..+..+..+++|
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L-~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNL-ERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTC-CEEEEECTTCBGGGSCCCTTCTTC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCC-CEEEeECCccCcccChhhcCCCCC
Confidence 367789999999999999 677 6899999999999999776 3 3478899999 999999999998888899999999
Q ss_pred CEEEeecceeeeeCCccccCCCCCCEEecccCc-ceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec
Q 039925 133 QVMIFKENSLEGKFPNTLSNLRSLFYDNINRNE-FSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL 210 (549)
Q Consensus 133 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~ 210 (549)
++|++++|.+++..|..+..+++|++|++++|. +. .+| .+..++ |++|++++|.+++ ++ .+. .+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~-~l--------- 180 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIE-DF--------- 180 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGG-GC---------
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-Hhc-cC---------
Confidence 999999999998788889999999999999998 55 555 688888 9999999999984 44 333 33
Q ss_pred ccccccccccCcccccEEEcccccccc
Q 039925 211 LLAQKLYWSDVSTTATIIAMGGNQISG 237 (549)
Q Consensus 211 ~~~~~l~~l~~~~~L~~L~l~~n~l~~ 237 (549)
++|+.|++++|++.+
T Consensus 181 ------------~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 181 ------------PKLNQLYAFSQTIGG 195 (197)
T ss_dssp ------------SSCCEEEECBC----
T ss_pred ------------CCCCEEEeeCcccCC
Confidence 367778888887753
No 119
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.71 E-value=6.3e-17 Score=152.06 Aligned_cols=153 Identities=16% Similarity=0.175 Sum_probs=131.5
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|..+++| ++|+|++|+++...+..|..+++|++|+|++
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINL-KELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCC-cEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 46888898888 7887654 899999999999998878899999999 9999999999877778899999999999999
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccccc
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYW 218 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~ 218 (549)
|++++..+..|..+++|++|+|++|++. .+|..+..++ |++|++++|+++ .++...+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l----------------- 158 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRL----------------- 158 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCTTTTTTC-----------------
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-ccCHHHHhCC-----------------
Confidence 9999776777899999999999999998 7888899999 999999999999 4554332133
Q ss_pred ccCcccccEEEcccccccccc
Q 039925 219 SDVSTTATIIAMGGNQISGTI 239 (549)
Q Consensus 219 l~~~~~L~~L~l~~n~l~~~~ 239 (549)
++|+.|++++|.+....
T Consensus 159 ----~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 159 ----SSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp ----TTCCEEECTTSCBCTTB
T ss_pred ----CCCCEEEeeCCCccCCc
Confidence 36788888889887543
No 120
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=1.2e-19 Score=193.07 Aligned_cols=181 Identities=18% Similarity=0.144 Sum_probs=147.5
Q ss_pred ccccCccceeeecccccccccccccCCCCCCCEEEeecce-------------eeeeCCccccCCCCCCEEe-cccCcce
Q 039925 102 SHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENS-------------LEGKFPNTLSNLRSLFYDN-INRNEFS 167 (549)
Q Consensus 102 ~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~ 167 (549)
..+++| +.|+|++|+++ .+|..++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L-~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQL-FRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTS-SSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccc-eeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 568888 99999999997 789999999999999997765 4456677788888888888 6666543
Q ss_pred ecccc------ccccc---ccceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccc
Q 039925 168 GLIPS------FIFNI---SLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGT 238 (549)
Q Consensus 168 ~~~p~------~~~~l---~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~ 238 (549)
. ++. .+..+ .|+.|++++|.++ .+|. +. .+ ++|+.|+|++|.++ .
T Consensus 424 ~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~-~lp~-~~-~l---------------------~~L~~L~Ls~N~l~-~ 477 (567)
T 1dce_A 424 D-LRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH-LE-QL---------------------LLVTHLDLSHNRLR-A 477 (567)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCSEEECTTSCCS-SCCC-GG-GG---------------------TTCCEEECCSSCCC-C
T ss_pred h-hhhhhhhcccccccCccCceEEEecCCCCC-CCcC-cc-cc---------------------ccCcEeecCccccc-c
Confidence 2 111 12222 2888999999988 4664 44 22 37889999999999 7
Q ss_pred cChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccC-CccccCCCCCCEEEccCCcccccC
Q 039925 239 ITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNL-PSSLGYYQNLMELSVSRNKLSASL 317 (549)
Q Consensus 239 ~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~ 317 (549)
+|..+..+ ++|+.|+|++|.+++ + | .++.+++|+.|+|++|++++.. |..+..+++|+.|+|++|++++..
T Consensus 478 lp~~~~~l--~~L~~L~Ls~N~l~~-l----p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 478 LPPALAAL--RCLEVLQASDNALEN-V----D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CCGGGGGC--TTCCEEECCSSCCCC-C----G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred cchhhhcC--CCCCEEECCCCCCCC-C----c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 88899999 999999999999984 4 5 7899999999999999999766 999999999999999999999855
Q ss_pred C
Q 039925 318 P 318 (549)
Q Consensus 318 p 318 (549)
|
T Consensus 550 ~ 550 (567)
T 1dce_A 550 G 550 (567)
T ss_dssp S
T ss_pred c
Confidence 4
No 121
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=5.3e-18 Score=185.87 Aligned_cols=144 Identities=19% Similarity=0.207 Sum_probs=127.5
Q ss_pred cCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCC
Q 039925 49 LTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGN 128 (549)
Q Consensus 49 lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~ 128 (549)
.|..|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|..+++| ++|+|++|.|+ .+|..|++
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNL-RVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTC-CEEECTTSCCS-SCCSSGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCC-CEEeCcCCcCC-ccChhhcC
Confidence 4678899999999999999999 88988889999999999999999 899999999999 99999999999 77999999
Q ss_pred CCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc--cceeeCCCCcCcccCchhh
Q 039925 129 PSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS--LKWNFLPENSFTGNLPLEI 197 (549)
Q Consensus 129 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~--L~~L~l~~n~l~~~~p~~~ 197 (549)
+++|++|+|++|.|+ .+|..|+.+++|++|+|++|.+++.+|..+..+. +..+++++|.+++.+|..+
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 999999999999998 8899999999999999999999999999887765 4568899999998777543
No 122
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.1e-17 Score=160.78 Aligned_cols=123 Identities=12% Similarity=0.167 Sum_probs=60.3
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEE
Q 039925 56 FGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVM 135 (549)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L 135 (549)
+.++..+++++|.++ .++ .+..+++|++|++++|.++ .+| .+..+++| ++|++++|++++..+ +..+++|++|
T Consensus 18 l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L-~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNL-KELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTC-CEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCC-CEEECCCCccCCChh--hccCCCCCEE
Confidence 334445555555555 222 3455555666666665555 344 45555555 555555555554333 5555555555
Q ss_pred EeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCc
Q 039925 136 IFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 136 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~ 190 (549)
++++|++++ +|... . ++|++|++++|.+++. + .+..++ |++|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCC
Confidence 555555552 23211 1 4555555555555431 1 233444 444444444443
No 123
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=8.4e-17 Score=147.50 Aligned_cols=106 Identities=20% Similarity=0.222 Sum_probs=69.5
Q ss_pred cCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCC
Q 039925 78 GRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLF 157 (549)
Q Consensus 78 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 157 (549)
..+++|++|++++|.++ .+| .+..+++| ++|++++|.++. +..+..+++|++|++++|.+++..+..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L-~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNI-KDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTC-SEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCC-CEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 55667777777777777 555 56677777 777777775542 23566677777777777777655666666777777
Q ss_pred EEecccCcceecccccccccc-cceeeCCCCc
Q 039925 158 YDNINRNEFSGLIPSFIFNIS-LKWNFLPENS 188 (549)
Q Consensus 158 ~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~ 188 (549)
+|++++|.+++..+..+..++ |++|++++|.
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 777777766655555555555 5555555554
No 124
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.4e-16 Score=145.37 Aligned_cols=132 Identities=22% Similarity=0.254 Sum_probs=120.4
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCc-ccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPA-NLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
+++++++|.++ .+|..+.. +|++|++++|++++..+. .+..+++| ++|+|++|++++..|..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHL-VKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTC-CEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCC-CEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 68999999997 88886654 899999999999955554 48999999 999999999999999999999999999999
Q ss_pred cceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCch
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPL 195 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~ 195 (549)
+|++++..+..|..+++|++|+|++|++++..|..|..++ |++|++++|.+.+..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9999988888899999999999999999999999999999 99999999999876553
No 125
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=2.2e-17 Score=158.59 Aligned_cols=170 Identities=18% Similarity=0.209 Sum_probs=101.7
Q ss_pred CCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCE
Q 039925 79 RLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFY 158 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 158 (549)
.+.++..+++++|.++ .++ .+..+++| ++|++++|.++. ++ .+..+++|++|+|++|.+++ ++. +..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L-~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGV-QNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTC-SEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcC-cEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCE
Confidence 3455666667776666 333 45666666 666666666653 23 45566666666666666663 232 566666666
Q ss_pred EecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEccccccccc
Q 039925 159 DNINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQISGT 238 (549)
Q Consensus 159 L~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l~~~ 238 (549)
|++++|++++ +|.... + +|+.|++++|.+++.
T Consensus 90 L~L~~N~l~~-l~~~~~--~---------------------------------------------~L~~L~L~~N~l~~~ 121 (263)
T 1xeu_A 90 LSVNRNRLKN-LNGIPS--A---------------------------------------------CLSRLFLDNNELRDT 121 (263)
T ss_dssp EECCSSCCSC-CTTCCC--S---------------------------------------------SCCEEECCSSCCSBS
T ss_pred EECCCCccCC-cCcccc--C---------------------------------------------cccEEEccCCccCCC
Confidence 6666666553 221111 2 455555555555532
Q ss_pred cChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 239 ITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 239 ~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
..+..+ ++|+.|++++|++++ + + .+..+++|++|++++|++++. ..+..+++|+.|++++|++++
T Consensus 122 --~~l~~l--~~L~~L~Ls~N~i~~-~----~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 122 --DSLIHL--KNLEILSIRNNKLKS-I----V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp --GGGTTC--TTCCEEECTTSCCCB-C----G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred --hhhcCc--ccccEEECCCCcCCC-C----h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 235555 677777777777663 2 2 466677777777777777744 556777777777777777764
No 126
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.4e-16 Score=143.43 Aligned_cols=135 Identities=16% Similarity=0.222 Sum_probs=103.0
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccce
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTK 110 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~ 110 (549)
|+|.++.|+.. +++ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|++++..+..+..+++| ++
T Consensus 7 C~~~~l~~~~~--~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~ 80 (177)
T 2o6r_A 7 CSGTEIRCNSK--GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL-TI 80 (177)
T ss_dssp EETTEEECCSS--CCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC-CE
T ss_pred eCCCEEEecCC--CCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCcc-CE
Confidence 78999999653 233 4565443 688899999998886555677888899999999998885555557788888 88
Q ss_pred eeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceeccc
Q 039925 111 LFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIP 171 (549)
Q Consensus 111 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 171 (549)
|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..|
T Consensus 81 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 81 LYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8888888887777778888888888888888885555556778888888888887775443
No 127
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=7.6e-17 Score=143.77 Aligned_cols=137 Identities=20% Similarity=0.158 Sum_probs=114.1
Q ss_pred CCCCCCEEEccCCcce-ecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCC
Q 039925 55 NFGYLRFINLVDNNFR-GEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQ 133 (549)
Q Consensus 55 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~ 133 (549)
..++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++| ++|++++|.+++.+|..+.++++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKL-KKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSC-CEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCC-CEEECcCCcCchHHHHHHhhCCCCC
Confidence 3478999999999998 67888888999999999999999854 778889999 9999999999877888888899999
Q ss_pred EEEeecceeeeeC-CccccCCCCCCEEecccCcceeccc---ccccccc-cceeeCCCCcCcccCch
Q 039925 134 VMIFKENSLEGKF-PNTLSNLRSLFYDNINRNEFSGLIP---SFIFNIS-LKWNFLPENSFTGNLPL 195 (549)
Q Consensus 134 ~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~-L~~L~l~~n~l~~~~p~ 195 (549)
+|++++|.+++.. +..+..+++|++|++++|.+++..+ ..+..++ |++|++++|.+. .+|.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 9999999998432 2678889999999999999885544 4778888 999999988877 4543
No 128
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=2.8e-16 Score=143.36 Aligned_cols=130 Identities=17% Similarity=0.225 Sum_probs=81.0
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccce
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTK 110 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~ 110 (549)
|.|..+.|+.. +++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|.|++..+..|..+++| ++
T Consensus 10 C~~~~l~~~~~--~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L-~~ 82 (193)
T 2wfh_A 10 CLDTVVRCSNK--GLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL-LT 82 (193)
T ss_dssp EETTEEECTTS--CCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC-CE
T ss_pred eCCCEEEcCCC--CCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCC-CE
Confidence 45666666532 222 4554432 46666777777666 566666666677777777776665555556666666 66
Q ss_pred eeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcce
Q 039925 111 LFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFS 167 (549)
Q Consensus 111 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 167 (549)
|+|++|+++...+..|..+++|++|+|++|.++...+..|..+++|++|+|++|.+.
T Consensus 83 L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 83 LILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp EECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred EECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666666666666666666666666666666666444445666666666666666654
No 129
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.66 E-value=2.1e-17 Score=177.96 Aligned_cols=246 Identities=14% Similarity=0.096 Sum_probs=154.5
Q ss_pred CCCCCcceeCCCCCceE------eecCccccCCCCCCEEEccCCcce---ecCCcccc------------CCCCCCEeec
Q 039925 30 LCQWRGVTCTHQHQRIN------KCLTPHVGNFGYLRFINLVDNNFR---GEIPEKVG------------RLFRLEYLLL 88 (549)
Q Consensus 30 ~c~w~gv~c~~~~~~v~------g~lp~~~~~l~~L~~L~L~~n~l~---~~~p~~~~------------~l~~L~~L~L 88 (549)
|+.|.++.+... ..+. ...+..+..+++|++|+|+++... +.+|..++ .+++|++|+|
T Consensus 41 ck~W~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L 119 (592)
T 3ogk_B 41 CRRWFKIDSETR-EHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHF 119 (592)
T ss_dssp CHHHHHHHHHHC-CEEEESCGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEE
T ss_pred hHHHHHhhhccc-cEEEEeeccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEe
Confidence 337887754321 2222 122334567899999999886421 23443333 7899999999
Q ss_pred ccccccccCCcccccc-c-Cccceeeecccc-ccc-ccccccCCCCCCCEEEeecceeeee----CCccccCCCCCCEEe
Q 039925 89 ANNHFSGKIPANLSHC-S-NLLTKLFICETH-LSG-QLLDFIGNPSAIQVMIFKENSLEGK----FPNTLSNLRSLFYDN 160 (549)
Q Consensus 89 s~n~l~~~~p~~l~~l-~-~L~~~L~Ls~n~-l~~-~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~ 160 (549)
++|.+++..+..+... + +| ++|++++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 120 ~~~~i~~~~~~~l~~~~~~~L-~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~ 198 (592)
T 3ogk_B 120 RRMIVSDLDLDRLAKARADDL-ETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLN 198 (592)
T ss_dssp ESCBCCHHHHHHHHHHHGGGC-CEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEE
T ss_pred eccEecHHHHHHHHHhccccC-cEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEE
Confidence 9999887666666663 3 48 999999987 221 2333445789999999999998755 333456789999999
Q ss_pred cccCcce----ecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccc------cccccccCcccccEEE
Q 039925 161 INRNEFS----GLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLA------QKLYWSDVSTTATIIA 229 (549)
Q Consensus 161 L~~n~l~----~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~------~~l~~l~~~~~L~~L~ 229 (549)
+++|.+. ..++..+..++ |++|++++|.+. .++..+. .+++|+.|+++... .....+...++|+.|+
T Consensus 199 L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ 276 (592)
T 3ogk_B 199 FYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFK-AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLG 276 (592)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHH-HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEE
T ss_pred eeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHh-hhhHHHhhcccccccccchHHHHHHhhccccccccC
Confidence 9999987 34455666778 999999999988 4776666 89999999997411 0111222233555555
Q ss_pred ccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeecc
Q 039925 230 MGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALD 285 (549)
Q Consensus 230 l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls 285 (549)
++++.. ..+|..+..+ ++|++|+|++|.+++... +..+..+++|++|+++
T Consensus 277 l~~~~~-~~l~~~~~~~--~~L~~L~Ls~~~l~~~~~---~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 277 LSYMGP-NEMPILFPFA--AQIRKLDLLYALLETEDH---CTLIQKCPNLEVLETR 326 (592)
T ss_dssp ETTCCT-TTGGGGGGGG--GGCCEEEETTCCCCHHHH---HHHHTTCTTCCEEEEE
T ss_pred ccccch-hHHHHHHhhc--CCCcEEecCCCcCCHHHH---HHHHHhCcCCCEEecc
Confidence 554322 2334444444 555555555555432210 1223444445555444
No 130
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.65 E-value=8.3e-17 Score=158.42 Aligned_cols=81 Identities=20% Similarity=0.227 Sum_probs=69.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------eEEEeccccCCCceEEEEEe
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
..+.|...+.||+|+||.||+|+... +.. ++++.+ .+..++|||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~-----~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVRE-----GPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEE-----TTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEE-----CCEEEEEEe
Confidence 34567777889999999999999753 332 577776 788999999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||++|+|.++|+..+ .+++.+...|+.||++||+|||
T Consensus 131 y~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH 167 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLH 167 (336)
T ss_dssp CCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999998654 6999999999999999999999
No 131
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=7.8e-16 Score=140.41 Aligned_cols=128 Identities=20% Similarity=0.269 Sum_probs=117.2
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+++++++|.++ .+|..+. ++|++|+|++|.|+ .+|..|..+++| ++|+|++|.|++..+..|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L-~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHL-TLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCC-CEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 57999999999 7887654 68999999999999 789999999999 9999999999988889999999999999999
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCccc
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGN 192 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~ 192 (549)
|.+++..|..|..+++|++|+|++|.++...+..|..++ |+.|++++|.+...
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999988888999999999999999999976667788999 99999999998743
No 132
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.63 E-value=1.7e-15 Score=150.08 Aligned_cols=87 Identities=32% Similarity=0.590 Sum_probs=73.8
Q ss_pred ccccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCce
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
..++++|...+.||+|+||.||+|++.++.. ++++.. .+.
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 109 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNE 109 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-----TTC
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----CCe
Confidence 3688999999999999999999999875543 456655 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .....++|..++.++.|+++||+|||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSD--LPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSC--CCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHhccC--CCccccCHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999997653 12346899999999999999999999
No 133
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.63 E-value=4.2e-17 Score=175.73 Aligned_cols=37 Identities=16% Similarity=0.042 Sum_probs=25.9
Q ss_pred ccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeeccc
Q 039925 176 NIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLL 212 (549)
Q Consensus 176 ~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~ 212 (549)
.++ |++|++++|.+++.....+...+++|+.|++.+.
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 456 8888888888765444444447788888888763
No 134
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.63 E-value=1e-16 Score=158.56 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=64.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|+... +.. ++++.+ .
T Consensus 21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-----~ 95 (350)
T 4b9d_A 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-----N 95 (350)
T ss_dssp SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred CcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-----C
Confidence 345678888999999999999999753 332 566666 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++|||||++|+|.++|+..+ ...+++.+...|+.||+.||+|||
T Consensus 96 ~~~yiVmEy~~gg~L~~~i~~~~----~~~~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 96 GSLYIVMDYCEGGDLFKRINAQK----GVLFQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999997543 345788888999999999999999
No 135
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=2.5e-16 Score=137.41 Aligned_cols=108 Identities=19% Similarity=0.211 Sum_probs=58.5
Q ss_pred CCCCEEEccCCcce-ecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEE
Q 039925 57 GYLRFINLVDNNFR-GEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVM 135 (549)
Q Consensus 57 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L 135 (549)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++| ++|++++|.+++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L-~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKL-KKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTC-CEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCC-CEEECCCCcccchHHHHhhhCCCCCEE
Confidence 45666666666665 45555556666666666666666532 445555555 555555555554445444445555555
Q ss_pred Eeecceeeee-CCccccCCCCCCEEecccCcce
Q 039925 136 IFKENSLEGK-FPNTLSNLRSLFYDNINRNEFS 167 (549)
Q Consensus 136 ~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~ 167 (549)
++++|.+++. .+..+..+++|++|++++|.++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 5555555431 1244444555555555555444
No 136
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.61 E-value=2.3e-17 Score=177.76 Aligned_cols=252 Identities=13% Similarity=0.070 Sum_probs=140.5
Q ss_pred ccCCCCCCEEEccCC-cceecCCccccCCCCCCEeeccccc-------cc-----------------------ccCCccc
Q 039925 53 VGNFGYLRFINLVDN-NFRGEIPEKVGRLFRLEYLLLANNH-------FS-----------------------GKIPANL 101 (549)
Q Consensus 53 ~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~Ls~n~-------l~-----------------------~~~p~~l 101 (549)
+.++++|++|++++| .+. .+|..+..+++|++|+++.+. +. ..+|..+
T Consensus 207 ~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~ 285 (594)
T 2p1m_B 207 VTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVY 285 (594)
T ss_dssp HHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGH
T ss_pred HHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHH
Confidence 355799999999988 444 477777788888888755442 11 1122333
Q ss_pred ccccCccceeeeccccccccc-ccccCCCCCCCEEEeecceeee-eCCccccCCCCCCEEeccc---------Ccceecc
Q 039925 102 SHCSNLLTKLFICETHLSGQL-LDFIGNPSAIQVMIFKENSLEG-KFPNTLSNLRSLFYDNINR---------NEFSGLI 170 (549)
Q Consensus 102 ~~l~~L~~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~---------n~l~~~~ 170 (549)
..+++| ++|++++|.+++.. ...+..+++|++|++++| +.. .++.....+++|++|++.+ +.++...
T Consensus 286 ~~~~~L-~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~ 363 (594)
T 2p1m_B 286 SVCSRL-TTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQG 363 (594)
T ss_dssp HHHTTC-CEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHH
T ss_pred HhhCCC-CEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHH
Confidence 345666 77777777655332 223456677777777766 331 1222223466677776632 3333222
Q ss_pred ccccc-ccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeec-------ccccccc-------cccCcccccEEEccccc
Q 039925 171 PSFIF-NIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYIL-------LLAQKLY-------WSDVSTTATIIAMGGNQ 234 (549)
Q Consensus 171 p~~~~-~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~-------~~~~~l~-------~l~~~~~L~~L~l~~n~ 234 (549)
...+. .++ |++|.+..|.+++.....+...+++|+.|++. ..+.... .+...++|+.|++++ .
T Consensus 364 l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~ 442 (594)
T 2p1m_B 364 LVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-L 442 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-S
T ss_pred HHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-c
Confidence 22222 345 66676666666655555555456777777776 2222110 022234677777755 5
Q ss_pred cccccChhhhh-ccccCccEEEcCCCcccccCCCcCcccc-CCccccCeeeccCccccccCCc-cccCCCCCCEEEccCC
Q 039925 235 ISGTITLGIKK-LIFVNLYALTMVKNKLSGPIPHHIASSL-GNLTLLTYLALDNNKLQGNLPS-SLGYYQNLMELSVSRN 311 (549)
Q Consensus 235 l~~~~~~~~~~-l~~~~L~~L~L~~n~l~~~~p~~l~~~l-~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N 311 (549)
+++..+..+.. + ++|+.|+|++|.+++.. +..+ ..+++|++|+|++|.+++..+. .+..+++|+.|++++|
T Consensus 443 l~~~~~~~l~~~~--~~L~~L~L~~~~i~~~~----~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 443 LTDKVFEYIGTYA--KKMEMLSVAFAGDSDLG----MHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp CCHHHHHHHHHHC--TTCCEEEEESCCSSHHH----HHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred ccHHHHHHHHHhc--hhccEeeccCCCCcHHH----HHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 55444444443 4 66777777777665433 1222 4566777777777776533222 2344667777777777
Q ss_pred ccc
Q 039925 312 KLS 314 (549)
Q Consensus 312 ~l~ 314 (549)
+++
T Consensus 517 ~~~ 519 (594)
T 2p1m_B 517 SVS 519 (594)
T ss_dssp CCB
T ss_pred CCC
Confidence 664
No 137
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=3.8e-15 Score=133.94 Aligned_cols=132 Identities=14% Similarity=0.191 Sum_probs=115.5
Q ss_pred CCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 59 LRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 59 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..+..+++| ++|++++|.+++..+..|..+++|++|+++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQL-TKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTC-SEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccc-cEEECCCCcceEeChhHccCCCccCEEECC
Confidence 468999999998 6776543 799999999999996555667899999 999999999998878889999999999999
Q ss_pred cceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCc
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLP 194 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p 194 (549)
+|.+++..+..+..+++|++|++++|.+++..+..+..++ |++|++++|.+.+..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999977677789999999999999999976666678888 9999999999986554
No 138
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.3e-15 Score=132.74 Aligned_cols=129 Identities=16% Similarity=0.070 Sum_probs=111.5
Q ss_pred CCCCCCEeeccccccc-ccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCC
Q 039925 79 RLFRLEYLLLANNHFS-GKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLF 157 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 157 (549)
..++|+.|++++|.++ +.+|..+..+++| ++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEEL-EFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTC-CEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCC-cEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC
Confidence 3478999999999998 7899989999999 9999999999876 7899999999999999999977888888899999
Q ss_pred EEecccCcceec-ccccccccc-cceeeCCCCcCcccCc--hhhhhcCCCCcEeeec
Q 039925 158 YDNINRNEFSGL-IPSFIFNIS-LKWNFLPENSFTGNLP--LEIGVTLPKGRNYYIL 210 (549)
Q Consensus 158 ~L~L~~n~l~~~-~p~~~~~l~-L~~L~l~~n~l~~~~p--~~~~~~l~~L~~L~l~ 210 (549)
+|++++|.+++. .+..+..++ |++|++++|.+++..+ ......+++|+.|+++
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999999864 447889999 9999999999995443 1333378888887765
No 139
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.60 E-value=2.3e-15 Score=147.98 Aligned_cols=85 Identities=33% Similarity=0.470 Sum_probs=70.2
Q ss_pred cccccCcCC------CccccCceecEEEEEeCCCce--------------------------------------eEEEec
Q 039925 392 TVTNEFSSS------NMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEG 427 (549)
Q Consensus 392 ~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~ 427 (549)
.++++|+.. +.||+|+||.||+|...+..+ ++++..
T Consensus 22 ~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 101 (307)
T 2nru_A 22 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD 101 (307)
T ss_dssp HHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec
Confidence 567777766 889999999999998755433 466655
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ....++|..+..++.|+++||+|||
T Consensus 102 -----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH 150 (307)
T 2nru_A 102 -----GDDLCLVYVYMPNGSLLDRLSCLD---GTPPLSWHMRCKIAQGAANGINFLH 150 (307)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHTGG---GCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCceEEEEEecCCCcHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 677899999999999999997543 2346899999999999999999999
No 140
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=6.4e-15 Score=131.19 Aligned_cols=113 Identities=19% Similarity=0.127 Sum_probs=100.8
Q ss_pred CCCCCCEeeccccccc-ccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCC
Q 039925 79 RLFRLEYLLLANNHFS-GKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLF 157 (549)
Q Consensus 79 ~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 157 (549)
..++|++|++++|.++ +.+|..+..+++| ++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNL-EFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGC-CEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCC-CEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 3478999999999998 7889989999999 9999999999866 7899999999999999999977888888899999
Q ss_pred EEecccCcceecc-cccccccc-cceeeCCCCcCcccCch
Q 039925 158 YDNINRNEFSGLI-PSFIFNIS-LKWNFLPENSFTGNLPL 195 (549)
Q Consensus 158 ~L~L~~n~l~~~~-p~~~~~l~-L~~L~l~~n~l~~~~p~ 195 (549)
+|++++|.+++.. +..+..++ |++|++++|.+++ +|.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~ 137 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN-LND 137 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT-STT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc-hHH
Confidence 9999999998642 27888898 9999999999984 444
No 141
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.57 E-value=6.7e-16 Score=156.52 Aligned_cols=83 Identities=22% Similarity=0.327 Sum_probs=70.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|++.. +.. +|+|.. .+
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 185 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQ 185 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-----SS
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-----CC
Confidence 356688888999999999999999863 322 577766 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++++... ..+++..++.++.|+|+||+|||
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH 230 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLE 230 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998643 45889999999999999999999
No 142
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.57 E-value=8.5e-16 Score=148.53 Aligned_cols=80 Identities=24% Similarity=0.294 Sum_probs=63.3
Q ss_pred cCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCceEEEE
Q 039925 398 SSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 398 ~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
...+.||+|+||.||+|+...... ++++... ..++...++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEEE
Confidence 445679999999999999864332 4554321 1113568999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++|+|.++++... .+++.....++.||++||+|||
T Consensus 108 mEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH 146 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLH 146 (290)
T ss_dssp EECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998654 6899999999999999999999
No 143
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=2e-15 Score=150.01 Aligned_cols=199 Identities=12% Similarity=0.069 Sum_probs=120.3
Q ss_pred ccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcc----eecccccccccc-
Q 039925 104 CSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEF----SGLIPSFIFNIS- 178 (549)
Q Consensus 104 l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l----~~~~p~~~~~l~- 178 (549)
+++| +.|+|.+ .++...+.+|.++++|+.|++++|.+....+..|..+.++..+.+..+.. .......|.++.
T Consensus 100 ~~~L-~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 100 KQTL-EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp CTTC-CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred cCCC-cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 5555 5555555 55544445555566666666665555545555555555555544443211 111112232333
Q ss_pred cc-eeeCCCCcCcccCchhhhh---cCCCCcEeeecccccccccc---cCcccccEEEccccccccccChhhhhccccCc
Q 039925 179 LK-WNFLPENSFTGNLPLEIGV---TLPKGRNYYILLLAQKLYWS---DVSTTATIIAMGGNQISGTITLGIKKLIFVNL 251 (549)
Q Consensus 179 L~-~L~l~~n~l~~~~p~~~~~---~l~~L~~L~l~~~~~~l~~l---~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L 251 (549)
|+ .+.+... +.++..++. ...++..+.+.+.+.....- ..+++|+.+++++|+++...+..|.++ .+|
T Consensus 178 L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~--~~L 252 (329)
T 3sb4_A 178 LETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQK--KYL 252 (329)
T ss_dssp CEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTC--TTC
T ss_pred cceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCC--CCC
Confidence 32 2222221 122332221 23445555555432211111 124689999999999987777889999 999
Q ss_pred cEEEcCCCcccccCCCcCccccCCccccC-eeeccCccccccCCccccCCCCCCEEEccCCcccc
Q 039925 252 YALTMVKNKLSGPIPHHIASSLGNLTLLT-YLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 252 ~~L~L~~n~l~~~~p~~l~~~l~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
+.|+|.+| ++ .++ +..|.++++|+ .+++.+ .++...+.+|.++++|+.+++++|+++.
T Consensus 253 ~~l~l~~n-i~-~I~---~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~ 311 (329)
T 3sb4_A 253 LKIKLPHN-LK-TIG---QRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITT 311 (329)
T ss_dssp CEEECCTT-CC-EEC---TTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCE
T ss_pred CEEECCcc-cc-eeh---HHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCc
Confidence 99999988 55 454 57789999999 999988 7775667899999999999999998885
No 144
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.56 E-value=1e-14 Score=144.70 Aligned_cols=86 Identities=26% Similarity=0.475 Sum_probs=73.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
.++++|...+.||+|+||.||+|...++.. ++++.. ...
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 101 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-----PTE 101 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC-----SSC
T ss_pred HHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec-----CCc
Confidence 578899999999999999999998765443 466665 677
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... .....++|..+..++.|+++||+|||
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 102 RLLVYPYMANGSVASCLRERP--ESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp CEEEEECCTTCBHHHHHHCCS--TTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeccCCCHHHHHHhcc--ccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998654 12346999999999999999999999
No 145
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.6e-15 Score=133.95 Aligned_cols=132 Identities=16% Similarity=0.221 Sum_probs=94.4
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCC-CCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLF-RLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPS 130 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~ 130 (549)
.+.++++|+.|++++|.++ .+|. +..+. +|++|++++|.+++ + ..+..+++| ++|++++|.+++..+..|..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRL-KTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSC-CEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCC-CEEECCCCcccccCcchhhcCC
Confidence 4566778888888888887 4554 44444 78888888888874 3 567777788 8888888888765555567778
Q ss_pred CCCEEEeecceeeeeCCc--cccCCCCCCEEecccCcceeccccc----ccccc-cceeeCCCCcCc
Q 039925 131 AIQVMIFKENSLEGKFPN--TLSNLRSLFYDNINRNEFSGLIPSF----IFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 131 ~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~----~~~l~-L~~L~l~~n~l~ 190 (549)
+|++|++++|.++ .+|. .+..+++|++|++++|.+. .+|.. +..++ |+.|++++|...
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888888888876 4555 6777778888888888776 34443 66666 777777777654
No 146
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.55 E-value=2.6e-15 Score=155.85 Aligned_cols=144 Identities=25% Similarity=0.270 Sum_probs=106.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce--------------------------------eEEEeccccCCCceEEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
...++|...+.||+|+||.||+|.+.+..+ +|+|... ....++|
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~~iv 265 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLYIV 265 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSCEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCceEEE
Confidence 456788888999999999999999876544 5666551 3478999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-----------------------------c-----
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR-----------------------------V----- 485 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH-----------------------------~----- 485 (549)
||||++|+|.++++... ...+++..++.++.|||+||+||| .
T Consensus 266 ~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHC----TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 99999999999998653 234789999999999999999999 0
Q ss_pred ---------cccCCc------------------ceeeecc-C------------------c-ccchHHHHHHHHHHHHHH
Q 039925 486 ---------KMALPE------------------KVMEIVE-S------------------S-LLLEIEDCLVSVLTIGIL 518 (549)
Q Consensus 486 ---------~~~~~~------------------~~~~~~~-~------------------~-~~~~~~~~~~~l~~l~~~ 518 (549)
....|+ .+.+++. . + ....+..++.++.+++.+
T Consensus 342 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 000000 0001111 0 0 011124566789999999
Q ss_pred hccCCCCCCCCHHHHHHHHHHhhhh
Q 039925 519 CSVESPSERMEKPYIVSKLSHAREN 543 (549)
Q Consensus 519 C~~~~P~~RP~~~~v~~~L~~~~~~ 543 (549)
||+.+|++||+|.+|++.|+.+...
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999998754
No 147
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.55 E-value=6.3e-15 Score=145.09 Aligned_cols=82 Identities=20% Similarity=0.281 Sum_probs=70.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+|..... .. ++++.. .+..
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~ 82 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKRL 82 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCee
Confidence 456888899999999999999998542 22 567766 6789
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ..++|..+..++.|+++||+|||
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH 125 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSMD-----SQYPWSQRVSFAKDIASGMAYLH 125 (310)
T ss_dssp EEEEECCTTCBHHHHHHHCC-----TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 46899999999999999999999
No 148
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.54 E-value=2.3e-15 Score=152.18 Aligned_cols=83 Identities=24% Similarity=0.427 Sum_probs=69.1
Q ss_pred cccccCcCCCccccCceecEEEEEeC----CCc-e-----------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG----EKW-T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~-~-----------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+|+||.||+|++. ++. + +|++..
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 117 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK---- 117 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee----
Confidence 35568999999999999999999864 221 1 566766
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++... ..+++.+++.++.|+++||+|||
T Consensus 118 -~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 164 (373)
T 2qol_A 118 -SKPVMIVTEYMENGSLDSFLRKHD-----AQFTVIQLVGMLRGIASGMKYLS 164 (373)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEEeCCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 46899999999999999999999
No 149
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.54 E-value=2.1e-15 Score=148.94 Aligned_cols=81 Identities=17% Similarity=0.123 Sum_probs=69.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|...+.||+|+||.||+|+... +.. ++++.. ++.
T Consensus 71 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~ 145 (346)
T 4fih_A 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDE 145 (346)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred ChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CCE
Confidence 445678888899999999999999853 332 566766 788
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++|||||++|+|.++++.. .+++.+...|+.||+.||+|||
T Consensus 146 ~~ivmEy~~gg~L~~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH 187 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLH 187 (346)
T ss_dssp EEEEECCCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999753 4899999999999999999999
No 150
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.53 E-value=3.8e-15 Score=147.72 Aligned_cols=83 Identities=20% Similarity=0.347 Sum_probs=69.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cc----e-----------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KW----T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~----~-----------------------------------~g~~~~~~~~ 431 (549)
...+.|...+.||+|+||.||+|.+.. +. + ++++..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 121 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR---- 121 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG----
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 345678888999999999999999742 11 2 566665
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 122 -~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH 168 (325)
T 3kul_A 122 -GRLAMIVTEYMENGSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLS 168 (325)
T ss_dssp -GGCCEEEEECCTTCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCccEEEeeCCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999997543 46899999999999999999999
No 151
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.1e-16 Score=146.93 Aligned_cols=135 Identities=15% Similarity=0.166 Sum_probs=83.4
Q ss_pred cCCCCCCEEEccCCcceecCCc------cccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 54 GNFGYLRFINLVDNNFRGEIPE------KVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.....++.++++.+.+++.+|. .|..+++|++|+|++|.+++ +| .+..+++| ++|++++|.++ .+|..+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L-~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENL-RILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTC-CEEEEEEEEEC-SCSSHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCC-CEEECCCCCcc-cccchhh
Confidence 3344555556666666555554 66666677777777776663 55 66666666 77777777666 4455555
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceeccc-ccccccc-cceeeCCCCcCcccCc
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIP-SFIFNIS-LKWNFLPENSFTGNLP 194 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~-L~~L~l~~n~l~~~~p 194 (549)
.+++|++|++++|.+++ +| .+..+++|++|++++|++....+ ..+..++ |++|++++|.+.+..|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 56667777777776663 33 46666667777777776664322 3556666 7777777776654433
No 152
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.52 E-value=4.2e-15 Score=156.03 Aligned_cols=84 Identities=21% Similarity=0.369 Sum_probs=71.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc--e---------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW--T---------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~---------------------------------~g~~~~~~~~~~~~~ 436 (549)
...++|...+.||+|+||.||+|++.... + +|+|.. ....
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~~ 291 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPF 291 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSC
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEec-----CCcE
Confidence 35667888899999999999999986422 1 577776 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|||||++|+|.++++... ...+++..++.++.|||+||+|||
T Consensus 292 ~lv~E~~~~g~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp EEEEECCTTCBHHHHHHHSC----TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 346899999999999999999999
No 153
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.52 E-value=4.1e-15 Score=144.90 Aligned_cols=87 Identities=16% Similarity=0.251 Sum_probs=62.2
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccc-------c
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTD-------F 430 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~-------~ 430 (549)
+||...+.||+|+||+||+|+... +.. ++++...+ .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468888999999999999999753 322 34443211 0
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
......++|||||++|+|.++++... .....++...+.|+.||++||+|||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~al~ylH 135 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC---TIEERERSVCLHIFLQIAEAVEFLH 135 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC---SGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC---CCChhHHHHHHHHHHHHHHHHHHHH
Confidence 11234789999999999999998654 2234566677899999999999999
No 154
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.51 E-value=2.9e-15 Score=146.36 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=66.8
Q ss_pred ccccCcCCCccccCceecEEEEEeC-----CCce-----------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-----EKWT-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~-----------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|++. ++.. ++++...+
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 84 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--- 84 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 4567888899999999999999863 2221 45554311
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 131 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLG 131 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHCG-----GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCHHHHHHhcc-----cccCHHHHHHHHHHHHHHHHHHh
Confidence 345799999999999999998654 45899999999999999999999
No 155
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.51 E-value=6.2e-15 Score=141.92 Aligned_cols=85 Identities=12% Similarity=0.167 Sum_probs=70.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+|++.+..+ ++++... .....
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~ 84 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPHP 84 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSSC
T ss_pred CHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCCe
Confidence 45678888999999999999999875444 4555541 12678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ...+++..+..++.|+++||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH 128 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGT----NFVVDQSQAVKFALDMARGMAFLH 128 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCS----SCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeeecccCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998653 346899999999999999999999
No 156
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.51 E-value=9.3e-15 Score=140.73 Aligned_cols=82 Identities=24% Similarity=0.334 Sum_probs=69.7
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|.+.++.. ++++.. ....++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 82 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICL 82 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCceEE
Confidence 44678888999999999999999865442 466665 677899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 83 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~lH 123 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQR-----GLFAAETLLGMCLDVCEGMAYLE 123 (269)
T ss_dssp EEECCTTCBHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhcC-----cccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 46899999999999999999999
No 157
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.51 E-value=4.8e-15 Score=150.07 Aligned_cols=82 Identities=17% Similarity=0.123 Sum_probs=70.0
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCc
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~ 434 (549)
....+.|...+.||+|+||.||+|+... +.. ++++.. .+
T Consensus 147 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~ 221 (423)
T 4fie_A 147 GDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GD 221 (423)
T ss_dssp SCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred CChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-----CC
Confidence 3456779889999999999999999753 332 566666 78
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++|||||++|+|.++++.. .+++.+...|+.||++||+|||
T Consensus 222 ~~~iVmEy~~gG~L~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH 264 (423)
T 4fie_A 222 ELWVVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLH 264 (423)
T ss_dssp EEEEEEECCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCcHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999753 4899999999999999999999
No 158
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.50 E-value=4.5e-15 Score=144.22 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=67.5
Q ss_pred cccCcCCCccccCceecEEEEEeCC----Cce-------------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE----KWT-------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~-------------------------------------~g~~~~~~~~~ 432 (549)
.++|...+.||+|+||+||+|+... +.. ++++.+
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~----- 97 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT----- 97 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-----
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----
Confidence 3679999999999999999998632 111 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++..++|||||++|+|.++++..+ .+++.....++.|++.||+|||
T Consensus 98 ~~~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 98 EGKLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp TTEEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998654 6899999999999999999999
No 159
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.50 E-value=3.6e-15 Score=154.98 Aligned_cols=83 Identities=13% Similarity=0.272 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...++|...+.||+|+||.||+|.+.++.. ++++. .+..+
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~~ 258 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIY 258 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSCE
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCccE
Confidence 466788889999999999999999875432 45543 35689
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|||||++|+|.++++... ...+++..++.++.|||+||+|||
T Consensus 259 lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH----HHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998542 235788899999999999999999
No 160
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=5.4e-14 Score=126.22 Aligned_cols=114 Identities=12% Similarity=0.048 Sum_probs=97.5
Q ss_pred cccCCCCCCEeecccccccccCCccccccc-CccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCC
Q 039925 76 KVGRLFRLEYLLLANNHFSGKIPANLSHCS-NLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLR 154 (549)
Q Consensus 76 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 154 (549)
.+.++.+|++|++++|.++ .+|. +..+. +| ++|++++|.+++. ..|..+++|++|++++|.+++..+..+..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L-~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQF-DAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCC-SEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCC-CEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 5678899999999999999 5665 55555 89 9999999999875 6899999999999999999965555568999
Q ss_pred CCCEEecccCcceecccc--cccccc-cceeeCCCCcCcccCchh
Q 039925 155 SLFYDNINRNEFSGLIPS--FIFNIS-LKWNFLPENSFTGNLPLE 196 (549)
Q Consensus 155 ~L~~L~L~~n~l~~~~p~--~~~~l~-L~~L~l~~n~l~~~~p~~ 196 (549)
+|++|++++|.+. .+|. .+..++ |+.|++++|.++ .+|..
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~ 131 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHY 131 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhH
Confidence 9999999999996 4555 788888 999999999998 56664
No 161
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.50 E-value=1.4e-14 Score=146.34 Aligned_cols=87 Identities=17% Similarity=0.259 Sum_probs=68.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC--------Cc-e------------------------------------eEEEec
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE--------KW-T------------------------------------AGYSEG 427 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--------~~-~------------------------------------~g~~~~ 427 (549)
..++|...+.||+|+||.||+|++.+ +. + +++|..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 45678888999999999999998631 11 1 466665
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++..... .....++|..++.++.|+++||+|||
T Consensus 159 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 220 (370)
T 2psq_A 159 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 220 (370)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999864310 11245899999999999999999999
No 162
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.49 E-value=1.3e-14 Score=146.54 Aligned_cols=143 Identities=20% Similarity=0.297 Sum_probs=101.2
Q ss_pred cCcCCCccccCceecEEEEEeCCC--c---e-----------------------------------eEEEeccccCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEK--W---T-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~--~---~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
.|...+.||+|+||.||+|++.+. . + +++|.. ..+.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCCC
Confidence 355667899999999999987321 1 1 455543 1456
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-----------------------------cc
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR-----------------------------VK 486 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH-----------------------------~~ 486 (549)
.++||||+++|+|.++++... ..+++..+..++.|+++||+||| ..
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccc
Confidence 789999999999999998643 46889999999999999999999 00
Q ss_pred ---------------------ccCCcc------------------eeeeccCcc--------------------cchHHH
Q 039925 487 ---------------------MALPEK------------------VMEIVESSL--------------------LLEIED 507 (549)
Q Consensus 487 ---------------------~~~~~~------------------~~~~~~~~~--------------------~~~~~~ 507 (549)
...|+. +.+++..+. ...+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~ 320 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 320 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTT
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 000000 001111000 000133
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhhcc
Q 039925 508 CLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVACN 547 (549)
Q Consensus 508 ~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~~~ 547 (549)
++.++.+++.+||+.+|++||++.||++.|+++...+.+.
T Consensus 321 ~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 321 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 5677899999999999999999999999999998765543
No 163
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.49 E-value=1.2e-14 Score=142.80 Aligned_cols=82 Identities=28% Similarity=0.412 Sum_probs=67.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...++|...+.||+|+||.||+|.+.+... ++++. .+..
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~~ 106 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDNL 106 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred ecccceEEEeEecCCCCeEEEEEEECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCcE
Confidence 355678888999999999999998765322 34443 4567
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH 149 (307)
T 3lb7_A 107 AIVTQWCEGSSLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLH 149 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999997543 46899999999999999999999
No 164
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.49 E-value=8.8e-15 Score=140.17 Aligned_cols=78 Identities=22% Similarity=0.270 Sum_probs=62.5
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+... +.. ++++.+ ++.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-----~~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KDE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CCE
Confidence 579999999999999999998643 332 455555 778
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+ +|+|.+++.... .+++.....++.|++.||+|||
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH 129 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCH 129 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999 689999998653 6899999999999999999999
No 165
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.48 E-value=4.3e-14 Score=139.95 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=67.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
..++|...+.||+|+||.||+|++.+..+ ++++.... ......++|
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~lv 100 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLWLI 100 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEE
T ss_pred chhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEEEE
Confidence 45678889999999999999999876544 45554411 112346999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.++++.. .++|..+..++.|+++||+|||
T Consensus 101 ~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH 138 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLH 138 (322)
T ss_dssp EECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999754 3899999999999999999999
No 166
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.48 E-value=2e-14 Score=139.46 Aligned_cols=83 Identities=22% Similarity=0.321 Sum_probs=67.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...++|...+.||+|+||.||+|.+.++.. ++++.. ....+
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 95 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPIF 95 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSEE
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEec-----CCCeE
Confidence 456678888999999999999999876532 466655 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 96 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 137 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMR-----HRFQTQQLLEMCKDVCEAMEYLE 137 (283)
T ss_dssp EEECCCTTCBHHHHHHCGG-----GCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 45899999999999999999999
No 167
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.48 E-value=1.2e-14 Score=145.08 Aligned_cols=88 Identities=23% Similarity=0.329 Sum_probs=70.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC------c-e-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK------W-T-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~------~-~-----------------------------------~g~~~~~~ 429 (549)
...++|...+.||+|+||.||+|+..+. . + ++++..
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 121 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-- 121 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--
Confidence 5678899999999999999999997531 1 1 566666
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCC------------------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNK------------------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~------------------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++..... .....+++..++.++.|+++||+|||
T Consensus 122 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH 191 (343)
T 1luf_A 122 ---GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 191 (343)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999764210 01256899999999999999999999
No 168
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.48 E-value=1e-14 Score=140.38 Aligned_cols=82 Identities=21% Similarity=0.295 Sum_probs=70.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|.+.++.. ++++.. ....++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 80 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-----EYPIYI 80 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCceEE
Confidence 45678888999999999999999876642 466655 678899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 81 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 121 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSHG-----KGLEPSQLLEMCYDVCEGMAFLE 121 (268)
T ss_dssp EEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCcHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998643 45899999999999999999999
No 169
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.3e-13 Score=122.95 Aligned_cols=105 Identities=15% Similarity=0.207 Sum_probs=72.0
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++| ++|+|++|+|++..+..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L-~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQL-TRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTC-SEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccC-CEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 45666666666 5665543 667777777777775556667777777 7777777777766666667777777777777
Q ss_pred ceeeeeCCccccCCCCCCEEecccCccee
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFSG 168 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 168 (549)
|++++..+..|..+++|++|+|++|.+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 77775555567777777777777777653
No 170
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.47 E-value=9.5e-15 Score=151.63 Aligned_cols=83 Identities=20% Similarity=0.292 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...++|...+.||+|+||.||+|.+.++.. +|++. .+..+
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------~~~~~ 254 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 254 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEc------CCceE
Confidence 456678888999999999999999876532 45554 35679
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|||||++|+|.++++... ...+++..++.++.|+|+||+|||
T Consensus 255 iv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp EEECCCTTCBHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEehhhcCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998532 235889999999999999999999
No 171
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.47 E-value=5.8e-15 Score=143.50 Aligned_cols=81 Identities=20% Similarity=0.189 Sum_probs=69.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||+||+|+... +.. ++++.+ +
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~ 104 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-----D 104 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----C
Confidence 34689999999999999999999753 332 455665 7
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++|||||++|+|.++++..+ .+++.....++.||+.||+|||
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH 149 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLH 149 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999998654 6899999999999999999999
No 172
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.47 E-value=1.3e-14 Score=142.90 Aligned_cols=85 Identities=26% Similarity=0.300 Sum_probs=71.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
...++|...+.||+|+||.||+|++.+..+ ++++.. .+.
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 108 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-----PPN 108 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----TTC
T ss_pred CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCc
Confidence 456788889999999999999998865444 466655 677
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ....+++..++.++.|+++||+|||
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH 154 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSG---AREQLDERRRLSMAYDVAKGMNYLH 154 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTT---HHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCcHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998643 1234899999999999999999999
No 173
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.47 E-value=2e-14 Score=145.03 Aligned_cols=88 Identities=24% Similarity=0.412 Sum_probs=70.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC------c-e-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK------W-T-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~------~-~-----------------------------------~g~~~~~~ 429 (549)
...++|...+.||+|+||.||+|++.+. . + ++++..
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-- 145 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-- 145 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec--
Confidence 3456788889999999999999996531 1 1 466655
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCC-CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNK-LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~-~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++..... .....+++..++.++.|+++||+|||
T Consensus 146 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 198 (367)
T 3l9p_A 146 ---SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198 (367)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999865411 12346899999999999999999999
No 174
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.47 E-value=2.9e-14 Score=139.39 Aligned_cols=82 Identities=23% Similarity=0.365 Sum_probs=64.9
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-----e-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-----T-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~-----------------------------------~g~~~~~~~~~~ 433 (549)
...|...+.||+|+||.||+|++.+.. + +++|.. ..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SE 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CC
Confidence 345777889999999999999874322 1 355443 14
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~ql~~~l~~lH 145 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKYLA 145 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTT-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 57789999999999999997543 46789999999999999999999
No 175
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=1.3e-15 Score=139.66 Aligned_cols=135 Identities=17% Similarity=0.143 Sum_probs=113.7
Q ss_pred ecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 48 CLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 48 ~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+|..|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++| ++|++++|++++ +| .+.
T Consensus 39 ~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L-~~L~L~~N~l~~-l~-~~~ 112 (198)
T 1ds9_A 39 KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL-EELWISYNQIAS-LS-GIE 112 (198)
T ss_dssp CCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC-SEEEEEEEECCC-HH-HHH
T ss_pred hhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC-CEEECcCCcCCc-CC-ccc
Confidence 344489999999999999999995 77 8999999999999999999 789888888999 999999999986 44 688
Q ss_pred CCCCCCEEEeecceeeeeCC-ccccCCCCCCEEecccCcceeccccc----------ccccc-cceeeCCCCcCc
Q 039925 128 NPSAIQVMIFKENSLEGKFP-NTLSNLRSLFYDNINRNEFSGLIPSF----------IFNIS-LKWNFLPENSFT 190 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~----------~~~l~-L~~L~l~~n~l~ 190 (549)
.+++|++|++++|.++...+ ..+..+++|++|++++|.+.+..|.. +..++ |+.|+ +|.++
T Consensus 113 ~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 113 KLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred cCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 89999999999999984322 47899999999999999998766542 55666 77765 55444
No 176
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.46 E-value=7.9e-14 Score=138.81 Aligned_cols=86 Identities=23% Similarity=0.325 Sum_probs=68.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
...++|...+.||+|+||.||+|++.+..+ ++.+......+....++
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred cChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 345678889999999999999998865444 33333322333556789
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... .+|..+..++.|+++||+|||
T Consensus 90 v~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~~L~~LH 128 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT-------SDWVSSCRLAHSVTRGLAYLH 128 (336)
T ss_dssp EECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHH
Confidence 999999999999997653 588999999999999999999
No 177
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.46 E-value=3.2e-14 Score=141.58 Aligned_cols=82 Identities=23% Similarity=0.466 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc------e-----------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW------T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~------~-----------------------------------~g~~~~~~~~ 431 (549)
..+.|...+.||+|+||.||+|.+.... + ++++..
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 117 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK---- 117 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS----
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec----
Confidence 4456777889999999999999874321 1 456655
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ..+++..++.++.|+++||+|||
T Consensus 118 -~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 164 (333)
T 1mqb_A 118 -YKPMMIITEYMENGALDKFLREKD-----GEFSVLQLVGMLRGIAAGMKYLA 164 (333)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHTT-----TCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcEEEEeCCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 46899999999999999999999
No 178
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.46 E-value=4.8e-14 Score=138.96 Aligned_cols=154 Identities=24% Similarity=0.333 Sum_probs=102.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-----e------------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-----T------------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~------------------------------------~g~~~~~~~ 430 (549)
...++|...+.||+|+||.||+|.+.... + ++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 45678889999999999999999864321 1 455544221
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhhcc------------------------
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLRVK------------------------ 486 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH~~------------------------ 486 (549)
.+....++||||+++|+|.+++...........+++..++.++.|+++||.|||..
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEee
Confidence 11234599999999999999985432112345789999999999999999999900
Q ss_pred ------------------------ccCCc------------------ceeeecc-Ccc-------------------cch
Q 039925 487 ------------------------MALPE------------------KVMEIVE-SSL-------------------LLE 504 (549)
Q Consensus 487 ------------------------~~~~~------------------~~~~~~~-~~~-------------------~~~ 504 (549)
...|+ .+.+++. ... ...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 270 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ 270 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCC
Confidence 00000 0001111 000 000
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhhhh
Q 039925 505 IEDCLVSVLTIGILCSVESPSERMEKPYIVSKLSHARENVA 545 (549)
Q Consensus 505 ~~~~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~~~ 545 (549)
+..++.++.+++.+||+.+|++||++.+|++.|+++..+++
T Consensus 271 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 12345678899999999999999999999999999987765
No 179
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.45 E-value=2.8e-14 Score=137.02 Aligned_cols=82 Identities=23% Similarity=0.297 Sum_probs=69.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|.+.++.. ++++.. .+..++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 80 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPICL 80 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSCEE
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCeEE
Confidence 34678888999999999999999865532 466665 677899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 81 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 121 (267)
T 3t9t_A 81 VTEFMEHGCLSDYLRTQR-----GLFAAETLLGMCLDVCEGMAYLE 121 (267)
T ss_dssp EECCCTTCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHhhCc-----ccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998643 46889999999999999999999
No 180
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.3e-13 Score=122.86 Aligned_cols=107 Identities=19% Similarity=0.254 Sum_probs=94.3
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccce
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTK 110 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~ 110 (549)
|+|..+.|+.. +++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++| ++
T Consensus 9 C~~~~l~~s~n--~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L-~~ 82 (170)
T 3g39_A 9 CSGTTVDCSGK--SLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL-TQ 82 (170)
T ss_dssp EETTEEECTTS--CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC-CE
T ss_pred cCCCEEEeCCC--CcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCC-CE
Confidence 68999999753 343 5777664 899999999999997778899999999999999999996556667899999 99
Q ss_pred eeecccccccccccccCCCCCCCEEEeecceee
Q 039925 111 LFICETHLSGQLLDFIGNPSAIQVMIFKENSLE 143 (549)
Q Consensus 111 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 143 (549)
|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 83 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 83 LSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred EECCCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 999999999888888999999999999999987
No 181
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.45 E-value=4e-14 Score=137.25 Aligned_cols=82 Identities=18% Similarity=0.265 Sum_probs=66.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-----e-----------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-----T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~-----------------------------------~g~~~~~~~~ 431 (549)
...+.|...+.||+|+||.||+|...... + ++++.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----- 86 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT----- 86 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-----
Confidence 34567888899999999999999875321 1 34443
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 87 -~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 133 (281)
T 1mp8_A 87 -ENPVWIIMELCTLGELRSFLQVRK-----YSLDLASLILYAYQLSTALAYLE 133 (281)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred -cCccEEEEecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999998543 46899999999999999999999
No 182
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.4e-13 Score=121.59 Aligned_cols=104 Identities=18% Similarity=0.278 Sum_probs=80.3
Q ss_pred CEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeec
Q 039925 60 RFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKE 139 (549)
Q Consensus 60 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 139 (549)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++| ++|+|++|+|++..+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNL-QQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCC-CEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 56788888886 6776654 778888888888886667778888888 8888888888876666677888888888888
Q ss_pred ceeeeeCCccccCCCCCCEEecccCcce
Q 039925 140 NSLEGKFPNTLSNLRSLFYDNINRNEFS 167 (549)
Q Consensus 140 n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 167 (549)
|+|++..+..|..+++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 8888544445777888888888888776
No 183
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.45 E-value=4.7e-14 Score=140.00 Aligned_cols=81 Identities=22% Similarity=0.377 Sum_probs=66.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce----------------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~----------------------------------------~g~~~~~~~~ 431 (549)
..++|...+.||+|+||.||+|++... .. +++|..
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 88 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 88 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES----
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec----
Confidence 456788899999999999999986422 10 455654
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++|+||+++|+|.++++... ..+++..++.++.|+++||+|||
T Consensus 89 --~~~~~v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH 134 (327)
T 3poz_A 89 --STVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLE 134 (327)
T ss_dssp --SSEEEEEECCTTCBHHHHHHHST-----TSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHh
Confidence 34789999999999999998654 46899999999999999999999
No 184
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.45 E-value=5e-14 Score=136.98 Aligned_cols=84 Identities=21% Similarity=0.364 Sum_probs=70.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...++|...+.||+|+||.||+|....... ++++.. ....
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 84 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPF 84 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCE
Confidence 356778888999999999999999864322 466665 6778
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ...+++..+..++.++++||+|||
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH 128 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLE 128 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCC----TTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHhcc----cCCccHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 356899999999999999999999
No 185
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.45 E-value=3.4e-14 Score=139.15 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=62.6
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
.++|...+.||+|+||.||+|++.+..+ ++++.... ......++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~lv~ 80 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLVS 80 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCC-CccceeEEEE
Confidence 3678899999999999999999875544 34444410 0012689999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++.. .+++..+..++.|+++||+|||
T Consensus 81 e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH 117 (303)
T 3gxj_A 81 DYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLH 117 (303)
T ss_dssp ECCTTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CC
T ss_pred eccCCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHH
Confidence 999999999999754 4888889999999999999998
No 186
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.45 E-value=2.1e-14 Score=141.11 Aligned_cols=82 Identities=20% Similarity=0.272 Sum_probs=66.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce--------------------------------eEEEeccccCCCceEEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
..++|...+.||+|+||.||+|.+.+..+ +|++. +..++||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~lv~ 78 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCLVM 78 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEEEE
T ss_pred CHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEEEE
Confidence 45678888999999999999999876544 23332 3478999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.++++... ....+++...+.++.|+++||+|||
T Consensus 79 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH 119 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAE---PLPYYTAAHAMSWCLQCSQGVAYLH 119 (307)
T ss_dssp ECCTTCBHHHHHHCSS---SEECCCHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHhccC---CCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 2235788889999999999999999
No 187
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.45 E-value=3.9e-14 Score=143.75 Aligned_cols=88 Identities=19% Similarity=0.203 Sum_probs=69.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC---------ce------------------------------------eEEEe
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK---------WT------------------------------------AGYSE 426 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~---------~~------------------------------------~g~~~ 426 (549)
...+.|...+.||+|+||.||+|+..+. .+ ++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 4567888899999999999999986321 01 46666
Q ss_pred ccccCCCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 427 GTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 427 ~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
. .+..++||||+++|+|.+++...... .....+++..+..++.|+++||+|||
T Consensus 146 ~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 208 (382)
T 3tt0_A 146 Q-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA 208 (382)
T ss_dssp S-----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred c-----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 5 67789999999999999999864310 11246899999999999999999999
No 188
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=2.6e-13 Score=134.68 Aligned_cols=220 Identities=12% Similarity=0.025 Sum_probs=158.6
Q ss_pred CCCCCEEEccCCcce--------------------ecCCccccC--------CCCCCEeecccccccccCCcccccccCc
Q 039925 56 FGYLRFINLVDNNFR--------------------GEIPEKVGR--------LFRLEYLLLANNHFSGKIPANLSHCSNL 107 (549)
Q Consensus 56 l~~L~~L~L~~n~l~--------------------~~~p~~~~~--------l~~L~~L~Ls~n~l~~~~p~~l~~l~~L 107 (549)
+++|++|||++|+|. ..-+..|.+ +++|+.|+|.+ .++..-+.+|..|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999988 222346778 99999999999 8885555679999999
Q ss_pred cceeeecccccccccccccCCCCCCCEEEeeccee----eeeCCccccCCCCCC--------------------------
Q 039925 108 LTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSL----EGKFPNTLSNLRSLF-------------------------- 157 (549)
Q Consensus 108 ~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l----~~~~p~~~~~l~~L~-------------------------- 157 (549)
+.|++++|.+....+.+|..+.++..+.+..+.. ...-...|.++.+|+
T Consensus 127 -~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~ 205 (329)
T 3sb4_A 127 -KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDIN 205 (329)
T ss_dssp -CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCS
T ss_pred -ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccc
Confidence 9999999999888888999888887776655322 111222344444444
Q ss_pred EEecccCcceecccccc-cccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccccccccccCcccccEEEcccccc
Q 039925 158 YDNINRNEFSGLIPSFI-FNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYWSDVSTTATIIAMGGNQI 235 (549)
Q Consensus 158 ~L~L~~n~l~~~~p~~~-~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~l~~~~~L~~L~l~~n~l 235 (549)
.+.+.++-.. .....+ ..++ |+.+++++|+++ .+|...+..++ +|+.+++.+| +
T Consensus 206 ~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~---------------------~L~~l~l~~n-i 261 (329)
T 3sb4_A 206 FLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKK---------------------YLLKIKLPHN-L 261 (329)
T ss_dssp EEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCT---------------------TCCEEECCTT-C
T ss_pred eEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCC---------------------CCCEEECCcc-c
Confidence 3333222111 111111 1356 999999999988 67776554444 5666667666 6
Q ss_pred ccccChhhhhccccCcc-EEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEc
Q 039925 236 SGTITLGIKKLIFVNLY-ALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSV 308 (549)
Q Consensus 236 ~~~~~~~~~~l~~~~L~-~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 308 (549)
....+.+|.++ .+|+ .+++.+ .++ .++ +..|.++++|+.++++.|.++...+.+|.++++|+.++.
T Consensus 262 ~~I~~~aF~~~--~~L~~~l~l~~-~l~-~I~---~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 262 KTIGQRVFSNC--GRLAGTLELPA-SVT-AIE---FGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CEECTTTTTTC--TTCCEEEEECT-TCC-EEC---TTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceehHHHhhCC--hhccEEEEEcc-cce-EEc---hhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 65666788888 8999 999988 565 343 578999999999999999999777779999999999864
No 189
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.44 E-value=4.4e-14 Score=140.04 Aligned_cols=81 Identities=25% Similarity=0.300 Sum_probs=66.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-c-----e-----------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-W-----T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~-----~-----------------------------------~g~~~~~~~~ 431 (549)
..++|...+.||+|+||.||+|++... . + +++|.
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----- 85 (325)
T 3kex_A 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP----- 85 (325)
T ss_dssp CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence 345788889999999999999987432 1 1 45443
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 86 -~~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 132 (325)
T 3kex_A 86 -GSSLQLVTQYLPLGSLLDHVRQHR-----GALGPQLLLNWGVQIAKGMYYLE 132 (325)
T ss_dssp -BSSEEEEEECCTTCBSHHHHHSSG-----GGSCTTHHHHHHHHHHHHHHHHH
T ss_pred -CCccEEEEEeCCCCCHHHHHHHcc-----ccCCHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999998643 46899999999999999999999
No 190
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.44 E-value=4.9e-14 Score=137.72 Aligned_cols=80 Identities=25% Similarity=0.354 Sum_probs=62.8
Q ss_pred cCcCCCccccCceecEEEEEeCCC-c----e-----------------------------------eEEEeccccCCCce
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEK-W----T-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~-~----~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
.|...+.||+|+||.||+|++.+. . + ++++.. ....
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP----PEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec----CCCC
Confidence 345568899999999999986322 1 1 455544 1334
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ..+++..+..++.|++.||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH 141 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLA 141 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccCCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999998643 46899999999999999999999
No 191
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.44 E-value=9.4e-14 Score=149.42 Aligned_cols=72 Identities=18% Similarity=0.330 Sum_probs=60.1
Q ss_pred ccccCceecEEEEEeCC---Cc-e-----------------------------------eEEEeccccCCCceEEEEEee
Q 039925 402 MIGQGSFGSVYKGILGE---KW-T-----------------------------------AGYSEGTDFKGIDFKAVVFDY 442 (549)
Q Consensus 402 ~lG~G~~g~Vy~~~~~~---~~-~-----------------------------------~g~~~~~~~~~~~~~~lv~ey 442 (549)
.||+|+||.||+|.+.. +. + +|+|.. +..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCeEEEEEe
Confidence 69999999999998742 11 1 566653 458999999
Q ss_pred cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 443 MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 443 ~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|++|+|.+++.... ..+++..+..++.|||+||+|||
T Consensus 417 ~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH 453 (613)
T 2ozo_A 417 AGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLE 453 (613)
T ss_dssp CTTCBHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999997543 46899999999999999999999
No 192
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.43 E-value=2e-14 Score=152.37 Aligned_cols=83 Identities=20% Similarity=0.292 Sum_probs=68.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...++|...+.||+|+||.||+|.+.++.. ++++. .+..+
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~------~~~~~ 337 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 337 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCE
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEe------eccce
Confidence 356678888999999999999999876432 45554 35679
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+|||||++|+|.++++... ...+++..++.++.||++||+|||
T Consensus 338 lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp EEECCCTTEEHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeeehhcCCcHHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998532 235889999999999999999999
No 193
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.43 E-value=3.4e-14 Score=138.31 Aligned_cols=82 Identities=27% Similarity=0.417 Sum_probs=65.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...+.|...+.||+|+||.||+|++.+... ++++. ....
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~~ 94 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------APQL 94 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------CCcc
Confidence 455678889999999999999998765322 34332 4567
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH 137 (289)
T 3og7_A 95 AIVTQWCEGSSLYHHLHASE-----TKFEMKKLIDIARQTARGMDYLH 137 (289)
T ss_dssp EEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997543 46899999999999999999999
No 194
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.42 E-value=9.4e-14 Score=137.21 Aligned_cols=78 Identities=22% Similarity=0.340 Sum_probs=63.1
Q ss_pred CcCCCccccCceecEEEEEeCC-----Cc-e-----------------------------------eEEEeccccCCCce
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-----KW-T-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-----~~-~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
|...+.||+|+||.||++.+.. +. + ++++... +...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---TTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---CCce
Confidence 4788899999999999987642 11 1 4555441 1457
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++... .+++..+..++.|+++||+|||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH 151 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLH 151 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999754 3899999999999999999999
No 195
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.42 E-value=2.3e-13 Score=135.38 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
...++|...+.||+|+||.||+|++.+..+ ++++.... ......++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~l 112 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGT-GSWTQLYL 112 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGGCEEEE
T ss_pred ccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCCCceEE
Confidence 445789999999999999999999875544 34444410 00157899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++.. .+++..+..++.|++.||+|||
T Consensus 113 v~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH 151 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLH 151 (337)
T ss_dssp EECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999754 4899999999999999999999
No 196
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.42 E-value=7e-14 Score=138.42 Aligned_cols=93 Identities=26% Similarity=0.437 Sum_probs=63.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-----e------------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-----T------------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~------------------------------------~g~~~~~~~ 430 (549)
...++|...+.||+|+||.||+|+..... + ++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 46678999999999999999999875431 2 344443110
Q ss_pred CC-CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KG-IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~-~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+ ....++||||+++|+|.+++...........+++..+..++.|+++||+|||
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH 154 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS 154 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 00 1123899999999999999975432122336899999999999999999999
No 197
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.41 E-value=1e-13 Score=139.68 Aligned_cols=86 Identities=17% Similarity=0.296 Sum_probs=66.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-------e-------------------------------------------
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-------T------------------------------------------- 421 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-------~------------------------------------------- 421 (549)
...++|...+.||+|+||.||+|.+..+. +
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 35568999999999999999999986542 1
Q ss_pred --eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 --AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 --~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++... ..+....++||||+ +|+|.+++.... ..+++..++.++.|+++||+|||
T Consensus 112 ~~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH 169 (364)
T 3op5_A 112 KYWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIH 169 (364)
T ss_dssp CEEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2333321 01124579999999 999999998643 46999999999999999999999
No 198
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.41 E-value=5.3e-14 Score=135.47 Aligned_cols=80 Identities=18% Similarity=0.256 Sum_probs=66.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|.+.+..+ ++++.. .+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 79 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-----EP 79 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-----C-
T ss_pred chhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-----CC
Confidence 45678889999999999999998765443 455655 66
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++++.. .+++..+..++.|+++||+|||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH 122 (271)
T 3dtc_A 80 NLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLH 122 (271)
T ss_dssp -CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998643 4889999999999999999999
No 199
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.41 E-value=7.1e-12 Score=127.34 Aligned_cols=241 Identities=10% Similarity=0.007 Sum_probs=167.3
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCE
Q 039925 55 NFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQV 134 (549)
Q Consensus 55 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~ 134 (549)
.+..++.+.+.+ .++..-..+|.++ +|+.+.+..+ ++..-..+|.++ +| +.+.+.. .++...+.+|.++++|+.
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L-~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TV-QEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CC-CEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-Cc-eEEEeCC-CccEehHHHhhCcccCCe
Confidence 346677777754 3553445567664 6888888766 553334455553 57 7888875 566566677888888888
Q ss_pred EEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhhhcCCCCcEeeecccc
Q 039925 135 MIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLA 213 (549)
Q Consensus 135 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~ 213 (549)
++++.|+++..-...|. ..+|+.+.+..+ +.......|.++. |+.+++..| ++ .++...+.. .+|+.+.+..++
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~lp~~i 259 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKLPNGV 259 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CCCSEEEEETTC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc-CCccEEEeCCCc
Confidence 88888888744444454 578888888744 6656667777777 888888764 44 455544434 678888887655
Q ss_pred cccc--cccCcccccEEEccccccc-----cccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccC
Q 039925 214 QKLY--WSDVSTTATIIAMGGNQIS-----GTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDN 286 (549)
Q Consensus 214 ~~l~--~l~~~~~L~~L~l~~n~l~-----~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~ 286 (549)
..+. .+..+++|+.+.+.+|.+. ...+..|.++ ++|+.++|.+ .++ .++ ...|.++++|+.++|..
T Consensus 260 ~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c--~~L~~l~l~~-~i~-~I~---~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 260 TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGC--PKLARFEIPE-SIR-ILG---QGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp CEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTC--TTCCEECCCT-TCC-EEC---TTTTTTCCSCCEEEECT
T ss_pred cEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCC--ccCCeEEeCC-ceE-EEh---hhhhcCCCCccEEEECc
Confidence 5443 2334468888888887765 3456778888 8999999984 455 343 46788999999999966
Q ss_pred ccccccCCccccCCCCCCEEEccCCcccc
Q 039925 287 NKLQGNLPSSLGYYQNLMELSVSRNKLSA 315 (549)
Q Consensus 287 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (549)
| ++..-..+|.++ +|+.+++++|.+..
T Consensus 333 ~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 333 N-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp T-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred c-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 5 665567789998 99999999998764
No 200
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.41 E-value=8.6e-14 Score=139.89 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhhh
Q 039925 508 CLVSVLTIGILCSVESPSERMEKPYIVSKLSHAREN 543 (549)
Q Consensus 508 ~~~~l~~l~~~C~~~~P~~RP~~~~v~~~L~~~~~~ 543 (549)
++.++.+++.+||+.+|++||++.||++.|+++...
T Consensus 321 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 321 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 445788999999999999999999999999988764
No 201
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.41 E-value=9.6e-14 Score=135.94 Aligned_cols=83 Identities=14% Similarity=0.319 Sum_probs=64.9
Q ss_pred cccCcCCCccccCceecEEEEEeCC-----Cce------------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-----KWT------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~------------------------------------~g~~~~~~~~~ 432 (549)
...|...+.||+|+||.||+|++.. +.. ++++... +
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---G 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---C
Confidence 3457778899999999999999632 111 3555441 1
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 143 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMDYLG 143 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCcHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHhh
Confidence 356799999999999999996543 45899999999999999999999
No 202
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.41 E-value=9.6e-14 Score=137.66 Aligned_cols=84 Identities=21% Similarity=0.332 Sum_probs=65.4
Q ss_pred ccccCcCCCccccCceecEEEEEeC-----CCce-----------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-----EKWT-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~-----------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|++. ++.. .+++... .
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~ 115 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---G 115 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-----
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---C
Confidence 4456788889999999999999863 2221 3444431 1
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... ..+++..++.++.|+++||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 162 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHK-----ERIDHIKLLQYTSQICKGMEYLG 162 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHST-----TSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 346799999999999999998653 46899999999999999999999
No 203
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=8.1e-13 Score=118.13 Aligned_cols=105 Identities=15% Similarity=0.247 Sum_probs=94.6
Q ss_pred CCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecc
Q 039925 83 LEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNIN 162 (549)
Q Consensus 83 L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (549)
-+.+++++|+++ .+|..+. ++| ++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDK-QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTC-SEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCC-cEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 478999999998 7888775 788 999999999999889999999999999999999996655667999999999999
Q ss_pred cCcceecccccccccc-cceeeCCCCcCcc
Q 039925 163 RNEFSGLIPSFIFNIS-LKWNFLPENSFTG 191 (549)
Q Consensus 163 ~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~ 191 (549)
+|++.+..+..|..++ |++|++++|.+..
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9999976666799999 9999999999983
No 204
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.40 E-value=1.5e-13 Score=148.31 Aligned_cols=72 Identities=22% Similarity=0.344 Sum_probs=59.6
Q ss_pred CccccCceecEEEEEeCCCc----e------------------------------------eEEEeccccCCCceEEEEE
Q 039925 401 NMIGQGSFGSVYKGILGEKW----T------------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~~~----~------------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+.||+|+||.||+|.+.... + +|+|.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 46999999999999764221 1 566643 4578999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||++|+|.++++... .+++..+..|+.||++||+|||
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH 486 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLE 486 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997543 6899999999999999999999
No 205
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.40 E-value=1e-13 Score=137.85 Aligned_cols=88 Identities=18% Similarity=0.183 Sum_probs=68.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-c------e------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-W------T------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~------~------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|...+. . + ++++..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH- 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-
Confidence 3567788899999999999999997431 1 1 466665
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCC--------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNN--------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~--------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++..... ......+++..++.++.|+++||+|||
T Consensus 122 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 181 (333)
T 2i1m_A 122 ----GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181 (333)
T ss_dssp ----SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh
Confidence 6788999999999999999975320 001235789999999999999999999
No 206
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.40 E-value=7.4e-14 Score=135.12 Aligned_cols=82 Identities=18% Similarity=0.332 Sum_probs=67.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~l 438 (549)
..++|...+.||+|+||.||+|...++.. ++++. .+..++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 84 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYI 84 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCcEE
Confidence 45678888999999999999999876532 34443 345789
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH 126 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFIE 126 (279)
T ss_dssp EEECCTTCBHHHHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997542 235899999999999999999999
No 207
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.40 E-value=8.8e-14 Score=137.99 Aligned_cols=85 Identities=24% Similarity=0.336 Sum_probs=68.0
Q ss_pred cccccCcCCCccccCceecEEEEEeC-----CCce-----------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-----EKWT-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~-----------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+|+||.||+|++. ++.. .+++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 96 (327)
T 3lxl_A 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP--- 96 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---
T ss_pred hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---
Confidence 34567888899999999999999963 1211 4555431
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH 144 (327)
T 3lxl_A 97 GRQSLRLVMEYLPSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLG 144 (327)
T ss_dssp SSCEEEEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 1567899999999999999998643 35899999999999999999999
No 208
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.40 E-value=1.3e-13 Score=137.15 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=68.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC--------Cc-e------------------------------------eEEEe
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE--------KW-T------------------------------------AGYSE 426 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~--------~~-~------------------------------------~g~~~ 426 (549)
...++|...+.||+|+||.||+|...+ +. + ++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 356788889999999999999998742 11 1 46665
Q ss_pred ccccCCCceEEEEEeecCCCCcccccccCCCC----------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 427 GTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNK----------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 427 ~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~----------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
. .+..++||||+++|+|.+++...... .....+++..++.++.|+++||+|||
T Consensus 112 ~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 174 (334)
T 2pvf_A 112 Q-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA 174 (334)
T ss_dssp S-----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred c-----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 5 67889999999999999999865410 01235889999999999999999999
No 209
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.39 E-value=3.3e-13 Score=131.97 Aligned_cols=85 Identities=19% Similarity=0.290 Sum_probs=67.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
...++|...+.||+|+||.||+|++.+..+ ++++... .......++
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~~~l 83 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQLWL 83 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEEEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCceeEE
Confidence 346789999999999999999999865444 3443321 111345789
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.++++.. .+++..+.+++.|+++||+|||
T Consensus 84 v~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH 122 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLH 122 (301)
T ss_dssp EECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHH
T ss_pred ehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999643 4899999999999999999998
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.39 E-value=6.1e-14 Score=135.66 Aligned_cols=85 Identities=28% Similarity=0.296 Sum_probs=67.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce--------------------------------eEEEeccccCCCceEEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
...++|...+.||+|+||.||+|...+..+ ++++.. ..+..++|
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv 93 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYIV 93 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCEEE
T ss_pred CChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceEEE
Confidence 345678889999999999999999875443 344433 13468999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 94 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH 134 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLE 134 (278)
T ss_dssp ECCCTTEEHHHHHHHHH----HHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997543 223788899999999999999999
No 211
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.39 E-value=1.7e-13 Score=134.83 Aligned_cols=88 Identities=18% Similarity=0.232 Sum_probs=68.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------Cc-e-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------KW-T-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~-----------------------------------~g~~~~~~ 429 (549)
...++|...+.||+|+||.||+|.... +. + ++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 97 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-- 97 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec--
Confidence 356778888999999999999998621 11 1 466655
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCC------------------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNK------------------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~------------------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++...... .....+++..+..++.|+++||+|||
T Consensus 98 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 167 (314)
T 2ivs_A 98 ---DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167 (314)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999999864310 01234889999999999999999999
No 212
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.39 E-value=1.7e-13 Score=136.81 Aligned_cols=88 Identities=18% Similarity=0.252 Sum_probs=67.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCC----Cc---e------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE----KW---T------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~---~------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|+..+ +. + ++++..
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 120 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL- 120 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-
Confidence 456788889999999999999999621 11 1 455555
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCC-----------------CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKL-----------------KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~-----------------~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++....... ....++|..++.++.|+++||+|||
T Consensus 121 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 189 (344)
T 1rjb_A 121 ----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 189 (344)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999998653100 0134899999999999999999999
No 213
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.39 E-value=5.2e-13 Score=130.16 Aligned_cols=83 Identities=27% Similarity=0.368 Sum_probs=63.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...+.|...+.||+|+||.||+|+... +.. ++.+.. .....+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecC----CCCceE
Confidence 456789999999999999999999643 221 233322 156789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+ +|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH 122 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS-----RKFSLKTVLLLADQMISRIEYIH 122 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcc-CCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999998543 45899999999999999999999
No 214
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.39 E-value=1.7e-13 Score=132.76 Aligned_cols=82 Identities=18% Similarity=0.399 Sum_probs=67.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-----e-----------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-----T-----------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~-----------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+|+||.||+|++.+.. + ++++.
T Consensus 9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----- 83 (281)
T 3cc6_A 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE----- 83 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-----
T ss_pred ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-----
Confidence 45678999999999999999999864321 1 35443
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 84 -~~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 130 (281)
T 3cc6_A 84 -EEPTWIIMELYPYGELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLE 130 (281)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHH
Confidence 345689999999999999997643 45889999999999999999999
No 215
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.39 E-value=1.7e-13 Score=133.55 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=63.7
Q ss_pred cccCcCCC-ccccCceecEEEEEeCCCc----e------------------------------------eEEEeccccCC
Q 039925 394 TNEFSSSN-MIGQGSFGSVYKGILGEKW----T------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 394 ~~~~~~~~-~lG~G~~g~Vy~~~~~~~~----~------------------------------------~g~~~~~~~~~ 432 (549)
.+.|...+ .||+|+||.||+|.+.... + ++++ .
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~----- 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E----- 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E-----
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C-----
Confidence 45566666 8999999999999653211 1 4555 2
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999998643 5889999999999999999999
No 216
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.39 E-value=2.4e-13 Score=134.84 Aligned_cols=81 Identities=22% Similarity=0.377 Sum_probs=66.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce----------------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~----------------------------------------~g~~~~~~~~ 431 (549)
..++|...+.||+|+||.||+|.+... .. +++|..
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 88 (327)
T 3lzb_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 88 (327)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES----
T ss_pred CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec----
Confidence 456788999999999999999997432 11 355543
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++|+||+++|+|.+++.... ..+++..++.++.|+++||+|||
T Consensus 89 --~~~~~v~~~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 134 (327)
T 3lzb_A 89 --STVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLE 134 (327)
T ss_dssp --SSEEEEECCCSSCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHh
Confidence 34789999999999999998654 46899999999999999999999
No 217
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.39 E-value=1.6e-13 Score=134.01 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=67.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..++|...+.||+|+||.||+|+... +.. ++++.. ....+
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-----~~~~~ 82 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-----GLHNV 82 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----TTEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCC-----CceeE
Confidence 45678889999999999999999632 222 345554 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+ +|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 123 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCG-----RKFSVKTVAMAAKQMLARVQSIH 123 (298)
T ss_dssp EEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec-CCCHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999998643 45899999999999999999999
No 218
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.38 E-value=1.6e-13 Score=135.50 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=70.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...++|...+.||+|+||.||+|.+.+... ++++.. .+..
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~ 104 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-----PPHL 104 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-----SSCE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----CCce
Confidence 456788999999999999999998764322 466666 6778
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH 147 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLH 147 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecccCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 46899999999999999999999
No 219
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.38 E-value=3e-13 Score=134.17 Aligned_cols=88 Identities=26% Similarity=0.366 Sum_probs=70.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+|+||.||+|+...... ++++..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~---- 97 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH---- 97 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE----
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee----
Confidence 566789999999999999999998643210 455555
Q ss_pred CCceEEEEEeecCCCCcccccccCCC----------CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNN----------KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~----------~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++..... ......+++..++.++.|+++||+|||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 159 (327)
T 1fvr_A 98 -RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 159 (327)
T ss_dssp -TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999975420 011246899999999999999999999
No 220
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.38 E-value=1.9e-13 Score=135.49 Aligned_cols=88 Identities=24% Similarity=0.410 Sum_probs=67.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC------c-e-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK------W-T-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~------~-~-----------------------------------~g~~~~~~ 429 (549)
...++|...+.||+|+||.||+|++.+. . + ++++..
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 104 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-- 104 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC--
Confidence 4567899999999999999999985421 1 1 466665
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCC-CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNK-LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~-~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++...... .....+++..++.++.|+++||+|||
T Consensus 105 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH 157 (327)
T 2yfx_A 105 ---SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157 (327)
T ss_dssp ---SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 66789999999999999999865411 11245889999999999999999999
No 221
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.38 E-value=3.2e-13 Score=131.26 Aligned_cols=80 Identities=16% Similarity=0.323 Sum_probs=63.4
Q ss_pred cccCcCCC-ccccCceecEEEEEeC---CCc-e-----------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSN-MIGQGSFGSVYKGILG---EKW-T-----------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~-~-----------------------------------~g~~~~~~~~~~ 433 (549)
.++|.... .||+|+||.||+|++. ++. + ++++. .
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 81 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------A 81 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------S
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------C
Confidence 34454444 8999999999999864 221 1 45553 4
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 127 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLE 127 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999997543 46899999999999999999999
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.37 E-value=2.4e-13 Score=147.25 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=66.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-----e-----------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-----T-----------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-----~-----------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|.+.... + +|++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence 4456777889999999999999975321 1 45553
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... ..+++..+..++.|+++||+|||
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 508 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLE 508 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEEcCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 356799999999999999998543 46899999999999999999999
No 223
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.37 E-value=2.6e-11 Score=123.22 Aligned_cols=216 Identities=13% Similarity=0.104 Sum_probs=126.9
Q ss_pred CCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEE
Q 039925 80 LFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYD 159 (549)
Q Consensus 80 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 159 (549)
+..++.+.+..+ ++..-..+|.++ +| +.+.+..+ ++.....+|.+. +|+.+.+.. .++..-+..|.++++|+.+
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L-~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QI-AKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CC-SEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-Cc-cEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 456666666543 442333445553 56 77777655 554555566663 577777764 5554555667777777777
Q ss_pred ecccCcceecccccccccccceeeCCCCcCcccCchhhhhcCCCCcEeeeccccccccc--ccCcccccEEEcccccccc
Q 039925 160 NINRNEFSGLIPSFIFNISLKWNFLPENSFTGNLPLEIGVTLPKGRNYYILLLAQKLYW--SDVSTTATIIAMGGNQISG 237 (549)
Q Consensus 160 ~L~~n~l~~~~p~~~~~l~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~~--l~~~~~L~~L~l~~n~l~~ 237 (549)
++..|.+.......|....|+.+.+..+ +. .++...+..+++|+.+.+..++..+.. +.. .+|+.+.+ .+.+..
T Consensus 186 ~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 186 DLSKTKITKLPASTFVYAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPENVSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp ECTTSCCSEECTTTTTTCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTTCCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred ecCCCcceEechhhEeecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCCccCcccccccc-CCccEEEe-CCCccE
Confidence 7777777655445555322777777643 44 455444446777777777664433321 111 36777777 344554
Q ss_pred ccChhhhhccccCccEEEcCCCcccc----cCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCC
Q 039925 238 TITLGIKKLIFVNLYALTMVKNKLSG----PIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRN 311 (549)
Q Consensus 238 ~~~~~~~~l~~~~L~~L~L~~n~l~~----~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 311 (549)
.....|.++ ++|+.+++.+|.+.. .++ +..|.++++|+.++|. +.++..-..+|.++++|+.++|..|
T Consensus 262 I~~~aF~~c--~~L~~l~l~~~~~~~~~~~~I~---~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 262 IASRAFYYC--PELAEVTTYGSTFNDDPEAMIH---PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ECTTTTTTC--TTCCEEEEESSCCCCCTTCEEC---TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred EChhHhhCC--CCCCEEEeCCccccCCcccEEC---HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 555666677 777777776665430 122 3566777777777777 3355444556777777777777444
No 224
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.37 E-value=3.8e-13 Score=140.07 Aligned_cols=82 Identities=27% Similarity=0.385 Sum_probs=66.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...++|...+.||+|+||.||+|+... +.. ..++.. .+..
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~-----~~~~ 78 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVE-----GDYN 78 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEE-----TTEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEee-----CCEE
Confidence 345789999999999999999999743 322 223333 5678
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+ +|+|.+++.... ..+++..++.|+.||+.||+|||
T Consensus 79 ~lvme~~-g~sL~~ll~~~~-----~~l~~~~~~~i~~qi~~aL~yLH 120 (483)
T 3sv0_A 79 VLVMDLL-GPSLEDLFNFCS-----RKLSLKTVLMLADQMINRVEFVH 120 (483)
T ss_dssp EEEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECC-CCCHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999998533 46999999999999999999999
No 225
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.37 E-value=7.1e-14 Score=135.98 Aligned_cols=82 Identities=21% Similarity=0.384 Sum_probs=68.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc---------e----------------------------------eEEEeccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW---------T----------------------------------AGYSEGTD 429 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~---------~----------------------------------~g~~~~~~ 429 (549)
..++|...+.||+|+||.||+|+..... + ++++..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 83 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-- 83 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC--
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe--
Confidence 4567888899999999999999864311 1 566665
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 84 ---~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH 130 (289)
T 4fvq_A 84 ---GDENILVQEFVKFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLE 130 (289)
T ss_dssp ---TTCCEEEEECCTTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCEEEEECCCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHh
Confidence 677899999999999999998653 35889999999999999999999
No 226
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.37 E-value=4.6e-13 Score=130.64 Aligned_cols=83 Identities=27% Similarity=0.368 Sum_probs=66.6
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce---------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT---------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~---------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...++|...+.||+|+||.||+|+.. ++.. ++.+.. .....+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 3uzp_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence 45678999999999999999999963 3322 233322 156779
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+ +|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 122 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS-----RKFSLKTVLLLADQMISRIEYIH 122 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec-CCCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999997433 46899999999999999999999
No 227
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.36 E-value=2.4e-13 Score=133.79 Aligned_cols=88 Identities=19% Similarity=0.210 Sum_probs=68.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------Cc-e------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------KW-T------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|++.+ +. + ++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 98 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI- 98 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-
Confidence 345678888999999999999998521 11 1 456655
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCC------------CCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNK------------LKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~------------~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++...... .....+++..+..++.|+++||+|||
T Consensus 99 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH 162 (313)
T 1t46_A 99 ----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 162 (313)
T ss_dssp ----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999999865310 01235899999999999999999999
No 228
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.35 E-value=3.2e-13 Score=132.75 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=67.1
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|... ++.. ++++..
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 34567889999999999999999864 2221 466665
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .....+++..+..++.++++||+|||
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 104 DNELNIVLELADAGDLSRMIKHFK--KQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp TTEEEEEEECCCSCBHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCCCHHHHHHHhc--ccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 678899999999999999987422 01246889999999999999999999
No 229
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.35 E-value=2e-13 Score=135.04 Aligned_cols=88 Identities=22% Similarity=0.345 Sum_probs=69.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------Cc-e-----------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------KW-T-----------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~-~-----------------------------------~g~~~~~~ 429 (549)
.+.++|...+.||+|+||.||+|+..+ +. + ++++..
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 99 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-- 99 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS--
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc--
Confidence 466789999999999999999997652 11 1 466655
Q ss_pred cCCCceEEEEEeecCCCCcccccccCC----CCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSN----NKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~----~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++... .......+++..++.++.|+++||+|||
T Consensus 100 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 155 (322)
T 1p4o_A 100 ---GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN 155 (322)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999997532 0001235789999999999999999999
No 230
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.35 E-value=6e-13 Score=132.70 Aligned_cols=84 Identities=19% Similarity=0.280 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
..++|...+.||+|+||.||+|++.+..+ ++++.... ......++|
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~~~~~~lv 118 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLV 118 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SSCCCEEEE
T ss_pred ccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-CccceeEEE
Confidence 45678889999999999999999865443 35554410 001278999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.++++.. .+++..++.++.|+|+||+|||
T Consensus 119 ~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH 156 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLH 156 (342)
T ss_dssp ECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999753 4899999999999999999999
No 231
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=9.4e-13 Score=130.16 Aligned_cols=82 Identities=16% Similarity=0.261 Sum_probs=69.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..+.|...+.||+|+||.||+|+...... ++++.. .+..+
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~ 77 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES-----MEELV 77 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEec-----CCEEE
Confidence 35678888999999999999998754321 566666 67899
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ..+++.....++.|+++||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH 119 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA-----FELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997543 46899999999999999999999
No 232
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.35 E-value=7.7e-13 Score=130.93 Aligned_cols=80 Identities=13% Similarity=0.192 Sum_probs=68.1
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.++|...+.||+|+||.||+|+... +.. ++++.. .+..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CCeE
Confidence 4678889999999999999998753 221 466665 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH 122 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLH 122 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998543 5899999999999999999999
No 233
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.34 E-value=5.5e-13 Score=131.23 Aligned_cols=79 Identities=19% Similarity=0.140 Sum_probs=67.1
Q ss_pred ccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCCce
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~~~ 435 (549)
++|...+.||+|+||.||+|+.. ++.. .++|.. .+.
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-----~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-----GGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-----CCE
Confidence 57888889999999999999986 3332 566666 778
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+ +|+|.+++.... ..++|..+..++.|++.||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 174 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLH 174 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999 779999987653 46999999999999999999999
No 234
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.34 E-value=1.6e-12 Score=126.21 Aligned_cols=138 Identities=12% Similarity=0.066 Sum_probs=97.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..+.|...+.||+|+||.||+|+... +.. ++++.. .
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 103 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----R 103 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----T
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----C
Confidence 34678888999999999999999864 221 455555 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh-----------------------------
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR----------------------------- 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH----------------------------- 484 (549)
+..++||||+++|+|.++++.. .......+++.|+++||+|||
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~ 175 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT 175 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC
T ss_pred CcEEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc
Confidence 7889999999999999999632 234467889999999999999
Q ss_pred ----------------------ccccCCc-cee-------eeccCcccch---HHHHHHHHHHHHHHhccCCCCCCCCHH
Q 039925 485 ----------------------VKMALPE-KVM-------EIVESSLLLE---IEDCLVSVLTIGILCSVESPSERMEKP 531 (549)
Q Consensus 485 ----------------------~~~~~~~-~~~-------~~~~~~~~~~---~~~~~~~l~~l~~~C~~~~P~~RP~~~ 531 (549)
....+.+ ... ..+....... ..+++.++.+++.+||+.||++| ++.
T Consensus 176 ~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~ 254 (286)
T 3uqc_A 176 MPDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SAS 254 (286)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHH
T ss_pred cCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHH
Confidence 0001110 000 1111111110 13456788999999999999999 999
Q ss_pred HHHHHHHHhhhhh
Q 039925 532 YIVSKLSHARENV 544 (549)
Q Consensus 532 ~v~~~L~~~~~~~ 544 (549)
|+++.|+++....
T Consensus 255 el~~~L~~~~~~~ 267 (286)
T 3uqc_A 255 TLLNLMQQATAVA 267 (286)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHhccC
Confidence 9999999887543
No 235
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.34 E-value=5.2e-13 Score=130.47 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=68.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|...+.||+|+||.||+|.... +.. ++++.. .+.
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 91 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE 91 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCE
Confidence 456679999999999999999998633 222 466665 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++... .+++.....++.|+++||+|||
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH 133 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLH 133 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999754 3889999999999999999999
No 236
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.9e-12 Score=129.51 Aligned_cols=108 Identities=15% Similarity=0.189 Sum_probs=75.3
Q ss_pred CCCCcceeCCCCCceEeecCccccCCCCCCEEEccC-CcceecCCccccCCCCCCEeecccccccccCCcccccccCccc
Q 039925 31 CQWRGVTCTHQHQRINKCLTPHVGNFGYLRFINLVD-NNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLT 109 (549)
Q Consensus 31 c~w~gv~c~~~~~~v~g~lp~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 109 (549)
|.|..|.|+.. .+++ .||. |..+++|++|+|++ |.|++..+..|.++++|++|+|++|+|++..|..|..+++| +
T Consensus 8 C~~~~v~~~~~-n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-~ 83 (347)
T 2ifg_A 8 HGSSGLRCTRD-GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL-S 83 (347)
T ss_dssp SSSSCEECCSS-CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCC-C
T ss_pred ccCCEEEcCCC-CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCC-C
Confidence 88988988652 1344 4777 77778888888875 77776666677777778888877777776666667777777 7
Q ss_pred eeeecccccccccccccCCCCCCCEEEeecceee
Q 039925 110 KLFICETHLSGQLLDFIGNPSAIQVMIFKENSLE 143 (549)
Q Consensus 110 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 143 (549)
+|+|++|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred EEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777777777655555555444 666666666554
No 237
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=5.8e-14 Score=141.35 Aligned_cols=110 Identities=15% Similarity=0.070 Sum_probs=48.8
Q ss_pred CCCCEEEccCCcceecCCccccC-----CCCCCEeecccccccccCCccc-ccccCccceeeeccccccccccccc----
Q 039925 57 GYLRFINLVDNNFRGEIPEKVGR-----LFRLEYLLLANNHFSGKIPANL-SHCSNLLTKLFICETHLSGQLLDFI---- 126 (549)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~~L~Ls~n~l~~~~~~~~---- 126 (549)
++|+.|+|++|.++......|.. .++|++|+|++|.++......+ ..+++| ++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L-~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRA-RKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTE-EEEECCSSCCCHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhc-cHhhcCCCCCCHHHHHHHHHHH
Confidence 45556666666655322222211 1456666666665543222222 223445 555555555543322222
Q ss_pred -CCCCCCCEEEeecceeee----eCCccccCCCCCCEEecccCcce
Q 039925 127 -GNPSAIQVMIFKENSLEG----KFPNTLSNLRSLFYDNINRNEFS 167 (549)
Q Consensus 127 -~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~ 167 (549)
...++|++|+|++|.++. .++..+..+++|++|+|++|.+.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 223445555555555442 12223344444555555555443
No 238
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.33 E-value=4.5e-13 Score=132.02 Aligned_cols=89 Identities=17% Similarity=0.222 Sum_probs=67.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCC------Cce-------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE------KWT-------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~-------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|++.+ +.. ++++..
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 102 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK- 102 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC-
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec-
Confidence 456788899999999999999998532 111 345443
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCC----------CCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKL----------KPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~----------~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||+++|+|.+++....... ....+++..+..++.|+++||+|||
T Consensus 103 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 165 (316)
T 2xir_A 103 ---PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165 (316)
T ss_dssp ---TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH
Confidence 1345899999999999999998654100 0123889999999999999999999
No 239
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.33 E-value=3.9e-13 Score=130.01 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=70.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~ 432 (549)
.+.++|...+.||+|+||.||+|....... ++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD----- 80 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----
Confidence 366789999999999999999998765431 566666
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++..+..++.|+++|++|||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH 126 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCH 126 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 5889999999999999999999
No 240
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.33 E-value=4.9e-13 Score=131.89 Aligned_cols=89 Identities=11% Similarity=0.030 Sum_probs=66.5
Q ss_pred ccccCcCCCccccCceecEEEEEeC-CCce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-EKWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+++.. ++.. ++++... .......
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 105 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEA 105 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCcee
Confidence 5568999999999999999999973 3322 3555420 0113577
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .....+++..+..++.|+++||+|||
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH 151 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLK--DKGNFLTEDQILWLLLGICRGLEAIH 151 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999997532 11356899999999999999999999
No 241
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.33 E-value=1.2e-12 Score=129.93 Aligned_cols=81 Identities=25% Similarity=0.314 Sum_probs=66.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------eEEEeccccCCCceEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------~g~~~~~~~~~~~~~~ 437 (549)
..++|...+.||+|+||.||+|+... +.. ++++.. ....+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~~ 81 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYNA 81 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCccE
Confidence 45688999999999999999999633 221 455555 67789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+ +|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH 122 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVH 122 (330)
T ss_dssp EEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC-CCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999998643 46899999999999999999999
No 242
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.33 E-value=4e-13 Score=130.35 Aligned_cols=86 Identities=22% Similarity=0.230 Sum_probs=70.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|+... +.. ++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~----- 82 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE----- 82 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----
Confidence 345678888999999999999999852 322 466665
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .....+++..+..++.|+++||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~al~~lH 132 (289)
T 1x8b_A 83 DDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAELKDLLLQVGRGLRYIH 132 (289)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHHH--HHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCcHHHHHHhhc--ccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998542 01245899999999999999999999
No 243
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.33 E-value=5.2e-13 Score=141.93 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=69.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..++|...+.||+|+||.||+|+... +.. ++++.. ....
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~~~~ 229 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-----DNEM 229 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-----SSEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEE
Confidence 34678889999999999999999753 322 455665 7889
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++|||||++|+|.++|.... ..+++.+...++.||++||+|||
T Consensus 230 ~iv~E~~~gg~L~~~i~~~~-----~~l~e~~~~~~~~qi~~al~ylH 272 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMH 272 (573)
T ss_dssp EEEEECCCCCBHHHHHTCTT-----SCEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997543 46899999999999999999999
No 244
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.32 E-value=6.6e-13 Score=129.56 Aligned_cols=81 Identities=16% Similarity=0.239 Sum_probs=68.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~ 433 (549)
..+.|...+.||+|+||.||+|+..... . ++++.. .
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 83 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-----D 83 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-----S
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-----C
Confidence 3467888899999999999999864322 1 455655 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ++++..+..++.|+++||+|||
T Consensus 84 ~~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 128 (294)
T 4eqm_A 84 DCYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAH 128 (294)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999998653 6899999999999999999999
No 245
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.32 E-value=1.1e-12 Score=127.08 Aligned_cols=87 Identities=21% Similarity=0.441 Sum_probs=66.8
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCce-------------------------------eEEEecccc-----------
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------AGYSEGTDF----------- 430 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------~g~~~~~~~----------- 430 (549)
.++|...+.||+|+||.||+|... ++.. .+++...++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 356888899999999999999986 3322 344332111
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
......++||||+++|+|.+++.... ...+++..+..++.|+++||.|||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH 139 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKRR----GEKLDKVLALELFEQITKGVDYIH 139 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHGG----GSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEeccCCCCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11345799999999999999997543 246899999999999999999999
No 246
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.31 E-value=2.4e-12 Score=125.00 Aligned_cols=81 Identities=27% Similarity=0.379 Sum_probs=65.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|+... +.. ++++..
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 94 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN- 94 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT-
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC-
Confidence 566789999999999999999999753 222 233322
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... ..+++..+..++.|+++|++|||
T Consensus 95 ------~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH 139 (287)
T 4f0f_A 95 ------PPRMVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQ 139 (287)
T ss_dssp ------TTEEEEECCTTCBHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCeEEEEecCCCCHHHHHhccc-----CCccHHHHHHHHHHHHHHHHHHH
Confidence 2379999999999999987543 46899999999999999999999
No 247
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.31 E-value=6e-13 Score=132.83 Aligned_cols=82 Identities=18% Similarity=0.176 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
...+.|...+.||+|+||.||+|+.. ++.. ++++.. .+
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----~~ 81 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-----AN 81 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CC
Confidence 34567888999999999999999863 2322 456655 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 82 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH 125 (347)
T 3zgw_A 82 KIFMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVH 125 (347)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999997654 5899999999999999999999
No 248
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.31 E-value=7.1e-13 Score=131.39 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=69.4
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|+.. ++.. ++++.. .
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~ 86 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-----E 86 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----C
Confidence 34568999999999999999999973 3332 466665 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH 131 (328)
T 3fe3_A 87 KTLYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCH 131 (328)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999997654 5889999999999999999999
No 249
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.30 E-value=1.7e-12 Score=125.33 Aligned_cols=83 Identities=18% Similarity=0.314 Sum_probs=69.5
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|+.. ++.. ++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 82 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED----- 82 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-----
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-----
Confidence 34567888999999999999999974 3332 456665
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 129 (278)
T 3cok_A 83 SNYVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLH 129 (278)
T ss_dssp SSEEEEEEECCTTEEHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 46899999999999999999999
No 250
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.30 E-value=1.3e-12 Score=129.59 Aligned_cols=47 Identities=19% Similarity=0.311 Sum_probs=40.2
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++++... .....++..+..++.|+++||+|||
T Consensus 135 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH 181 (332)
T 3qd2_B 135 YLYIQMQLCRKENLKDWMNRRC---SLEDREHGVCLHIFIQIAEAVEFLH 181 (332)
T ss_dssp EEEEEEECCCSSCHHHHHHTCC---SGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCHHHHHhccc---CccchhhHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999998654 2345567778999999999999999
No 251
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=4.8e-14 Score=141.98 Aligned_cols=72 Identities=15% Similarity=0.099 Sum_probs=41.7
Q ss_pred cccEEEcccccccccc----ChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccc
Q 039925 224 TATIIAMGGNQISGTI----TLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSL 297 (549)
Q Consensus 224 ~L~~L~l~~n~l~~~~----~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l 297 (549)
+|++|+|++|.+++.. +..+... ++|+.|+|++|.+++.....++..+...++|++|+|++|.|++.....+
T Consensus 184 ~L~~L~Ls~N~l~~~g~~~L~~~L~~~--~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 184 SVTHLSLLHTGLGDEGLELLAAQLDRN--RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SCCEEECTTSSCHHHHHHHHHHHGGGC--SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CcCEEeCCCCCCCcHHHHHHHHHHhcC--CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 5666666666665422 3344555 6777777777777643222223445556777777777777765433333
No 252
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.30 E-value=1.4e-12 Score=130.56 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=69.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc--e--------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW--T--------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~--~--------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...+.|...+.||+|+||.||+|+..+.. + ++++.. ....+
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~ 124 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFET-----PTEIS 124 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEEC-----SSEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEec-----CCeEE
Confidence 45667888999999999999999986432 1 456665 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 125 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH 165 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLH 165 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 5899999999999999999999
No 253
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.29 E-value=1e-12 Score=139.48 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=70.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------------~g~~~~~~ 429 (549)
..-++|...++||+|+||.||+|+... +.. ++++.+
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-- 263 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-- 263 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC--
T ss_pred CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE--
Confidence 346789999999999999999999754 332 345555
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++|||||+||+|.++|+..+ .+++.....|+.||+.||+|||
T Consensus 264 ---~~~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH 309 (689)
T 3v5w_A 264 ---PDKLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMH 309 (689)
T ss_dssp ---SSEEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999998654 6899999999999999999999
No 254
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.28 E-value=1.4e-12 Score=125.84 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=68.2
Q ss_pred ccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|+.. ++.. ++++.. .
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 83 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-----P 83 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----C
Confidence 3467888899999999999999975 3322 455655 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 128 (276)
T 2h6d_A 84 TDFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCH 128 (276)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999997643 5889999999999999999999
No 255
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.28 E-value=9e-13 Score=129.56 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=67.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|.... +.. ++++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~----- 105 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI----- 105 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----
Confidence 345688899999999999999999753 221 466665
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++..+..++.|+++||+|||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH 151 (309)
T 2h34_A 106 DGQLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAH 151 (309)
T ss_dssp TTEEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 5899999999999999999999
No 256
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.28 E-value=1.3e-12 Score=126.11 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=68.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
..+.|...+.||+|+||.||+|...+... ++++.. ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-----NTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCeE
Confidence 34568888999999999999999865432 566665 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH 123 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCH 123 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987643 5899999999999999999999
No 257
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.28 E-value=1.9e-12 Score=127.90 Aligned_cols=77 Identities=22% Similarity=0.130 Sum_probs=64.8
Q ss_pred cCcCCCccccCceecEEEEEeC-CCce-----------------------------------eEEEeccccCCCceEEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILG-EKWT-----------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~-----------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
.|...+.||+|+||.||+|+.. ++.. ++++.. .+..++|
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 120 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-----GEELWVL 120 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEEEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEEEE
Confidence 3566678999999999999975 3332 466666 6789999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++... .++|..+..++.|+++||+|||
T Consensus 121 ~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH 158 (321)
T 2c30_A 121 MEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLH 158 (321)
T ss_dssp ECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998743 4899999999999999999999
No 258
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.28 E-value=4.7e-12 Score=129.02 Aligned_cols=86 Identities=20% Similarity=0.225 Sum_probs=68.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCce
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
..+.|...+.||+|+||.||+|+... +.. ++++... ....
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---~~~~ 83 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRH 83 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCC
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC---CCCe
Confidence 34578888999999999999999864 222 3455441 1346
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.++++... ....+++..+..++.|++.||+|||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH 129 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPS---NAYGLPESEFLIVLRDVVGGMNHLR 129 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGG---GTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCHHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999998654 2234899999999999999999999
No 259
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.27 E-value=8e-13 Score=128.34 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=68.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCce
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
..+.|...+.||+|+||.||+|....... ++++.. ...
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 94 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-----YHN 94 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-----CCe
Confidence 45678888999999999999998753321 566665 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .....+++..+..++.|+++||+|||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH 141 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQ--ARGKALSEGYVAELMKQMMNALAYFH 141 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHH--HHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhhh--hcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999986432 01246899999999999999999999
No 260
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.27 E-value=1.9e-12 Score=128.24 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=67.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------------eEEEecccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------------~g~~~~~~~ 430 (549)
..+.|...+.||+|+||.||+|.... +.. ++++..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 85 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN--- 85 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 34568888999999999999998753 221 455555
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 86 --~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH 131 (326)
T 2y0a_A 86 --KTDVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLH 131 (326)
T ss_dssp --SSEEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999997543 6899999999999999999999
No 261
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.27 E-value=3e-12 Score=133.09 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=68.7
Q ss_pred ccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|+.. ++.. ++++.. .
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-----~ 88 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-----P 88 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 4567888899999999999999975 3322 466665 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 89 ~~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH 133 (476)
T 2y94_A 89 SDIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCH 133 (476)
T ss_dssp SEEEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999998543 6899999999999999999999
No 262
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.27 E-value=2.1e-12 Score=129.90 Aligned_cols=82 Identities=15% Similarity=0.088 Sum_probs=69.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------eEEEeccccCCCceE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------~g~~~~~~~~~~~~~ 436 (549)
...+.|...+.||+|+||.||+++... +.. ++++.. ....
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~ 91 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT-----PTHL 91 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEee-----CCEE
Confidence 345678889999999999999999753 322 466666 6789
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 92 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH 133 (361)
T 3uc3_A 92 AIIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCH 133 (361)
T ss_dssp EEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997543 5899999999999999999999
No 263
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.27 E-value=1.3e-12 Score=127.13 Aligned_cols=82 Identities=20% Similarity=0.187 Sum_probs=62.1
Q ss_pred cccccCcCCCccccCceecEEEEEeC--CCc---e-------------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG--EKW---T-------------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~---~-------------------------------------~g~~~~~~ 429 (549)
...++|...+.||+|+||.||+|++. ++. + ++++..
T Consensus 15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 92 (291)
T 1u46_A 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-- 92 (291)
T ss_dssp CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--
Confidence 34567888999999999999999863 222 1 344443
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 93 ----~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 138 (291)
T 1u46_A 93 ----PPMKMVTELAPLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLE 138 (291)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCceeeEecccCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999999999998643 45889999999999999999999
No 264
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.27 E-value=2e-12 Score=128.51 Aligned_cols=80 Identities=18% Similarity=0.180 Sum_probs=66.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
.-++|...+.||+|+||.||+|.... +.. ++++.. .
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~ 81 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-----P 81 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----C
Confidence 34678889999999999999999743 221 466666 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+ +|+|.+++.... .+++.....++.|+++||+|||
T Consensus 82 ~~~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH 125 (336)
T 3h4j_B 82 TDIVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCH 125 (336)
T ss_dssp SEEEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7889999999 789999987643 5899999999999999999999
No 265
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.27 E-value=1.3e-12 Score=130.48 Aligned_cols=84 Identities=21% Similarity=0.378 Sum_probs=60.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCC----Cce----------------------------------------------e
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE----KWT----------------------------------------------A 422 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~----------------------------------------------~ 422 (549)
..++|...+.||+|+||.||+|+... +.. +
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~ 114 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY 114 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence 34678899999999999999999864 111 2
Q ss_pred EEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 423 GYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 423 g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++.. ...+....++||||+ +|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 115 ~~~~~-~~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH 168 (345)
T 2v62_A 115 GSGLT-EFKGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIH 168 (345)
T ss_dssp EEEEE-ESSSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-ccCCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 22222 112246789999999 999999998643 6899999999999999999999
No 266
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.27 E-value=6.7e-12 Score=123.87 Aligned_cols=86 Identities=20% Similarity=0.225 Sum_probs=68.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCce
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~ 435 (549)
..+.|...+.||+|+||.||+|+... +.. ++++... ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 83 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRH 83 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCC
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC---CCce
Confidence 34568888999999999999999864 221 3444431 1347
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... ....+++..+..++.|+++||+|||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH 129 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPS---NAYGLPESEFLIVLRDVVGGMNHLR 129 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGG---GTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999998654 2234899999999999999999999
No 267
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.26 E-value=2.7e-12 Score=125.03 Aligned_cols=83 Identities=18% Similarity=0.193 Sum_probs=66.5
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce------------------------------------eEEEeccccCCCceEE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
.++|....+||+|+||.||+|....... ++++.. .+..+
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 95 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIK 95 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEE
Confidence 3455566689999999999999743321 566665 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ....+++..+..++.|+++||+|||
T Consensus 96 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH 139 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKW---GPLKDNEQTIGFYTKQILEGLKYLH 139 (295)
T ss_dssp EEEECCSEEEHHHHHHHTT---CCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhhc---cCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998653 2345678888899999999999999
No 268
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.26 E-value=3.8e-12 Score=127.79 Aligned_cols=82 Identities=20% Similarity=0.212 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------------~g~~~~~~ 429 (549)
...+.|...+.||+|+||.||+|+... +.. ++++..
T Consensus 9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-- 86 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-- 86 (361)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--
T ss_pred ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe--
Confidence 456678889999999999999998753 221 455555
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 87 ---~~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH 132 (361)
T 2yab_A 87 ---RTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLH 132 (361)
T ss_dssp ---SSEEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999997543 6899999999999999999999
No 269
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.26 E-value=2.2e-12 Score=130.68 Aligned_cols=83 Identities=12% Similarity=0.173 Sum_probs=69.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|...+.||+|+||.||+|.... +.. ++++.. ...
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~ 122 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYE 122 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCE
Confidence 345678889999999999999998753 322 456665 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... ..+++.....++.|+++||+|||
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 166 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQACEGLKHMH 166 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997543 46899999999999999999999
No 270
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.26 E-value=4.4e-12 Score=123.95 Aligned_cols=87 Identities=14% Similarity=0.234 Sum_probs=66.0
Q ss_pred ccccCcCC-CccccCceecEEEEEeCC-Cce-------------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSS-NMIGQGSFGSVYKGILGE-KWT-------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~-~~lG~G~~g~Vy~~~~~~-~~~-------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
..++|... ++||+|+||.||+|.... +.. ++++... .......++|
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~~lv 93 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCLLIV 93 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceEEEE
Confidence 34456554 779999999999999743 322 3333220 1124568999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||
T Consensus 94 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH 134 (299)
T 3m2w_A 94 MECLDGGELFSRIQDRG----DQAFTEREASEIMKSIGEAIQYLH 134 (299)
T ss_dssp ECCCCSCBHHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998653 346899999999999999999999
No 271
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.26 E-value=1.4e-12 Score=127.72 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=67.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
...+.|...+.||+|+||.||+|+... +.. ++++.. ..
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 93 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DT 93 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CC
Confidence 345568888999999999999998643 322 466665 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++... .+++..+..++.|+++||.|||
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH 136 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLH 136 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998743 4899999999999999999999
No 272
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.26 E-value=5.4e-12 Score=129.50 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=66.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e-------------------------------------------eEEEec
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T-------------------------------------------AGYSEG 427 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~-------------------------------------------~g~~~~ 427 (549)
...++|...+.||+|+||.||+|...... . ++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678888999999999999999875431 1 34443
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 211 -----~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH 256 (419)
T 3i6u_A 211 -----AEDYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLH 256 (419)
T ss_dssp -----SSEEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----cCceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999987543 6899999999999999999999
No 273
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.26 E-value=1.1e-12 Score=126.91 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=67.8
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCce
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
.++|...+.||+|+||.||+|.... +.. ++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 4678888999999999999999753 322 4544321 1467
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .....+++..+..++.|+++||+|||
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGT--KERQYLDEEFVLRVMTQLTLALKECH 128 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHhhc--ccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999997543 11345899999999999999999999
No 274
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.25 E-value=4.7e-12 Score=122.08 Aligned_cols=79 Identities=13% Similarity=0.199 Sum_probs=66.8
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||+|+... +.. ++++.. ....+
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 81 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNIQY 81 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-----CCEEE
Confidence 567888899999999999998753 322 466655 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++... ..+++.....++.|+++||+|||
T Consensus 82 lv~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH 122 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPD------IGMPEPDAQRFFHQLMAGVVYLH 122 (276)
T ss_dssp EEEECCTTEEGGGGSBTT------TBCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999754 35889999999999999999999
No 275
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.25 E-value=2.8e-12 Score=126.96 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=63.8
Q ss_pred CCccccCceecEEEEEeCC-Cce---------------------------------eEEEeccccCCCceEEEEEeecCC
Q 039925 400 SNMIGQGSFGSVYKGILGE-KWT---------------------------------AGYSEGTDFKGIDFKAVVFDYMQN 445 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------~g~~~~~~~~~~~~~~lv~ey~~~ 445 (549)
++.||+|+||.||+|+... +.. ++++.. ....++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHD-----QLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-----CCEEEEEEEccCC
Confidence 5789999999999999864 322 566666 7788999999999
Q ss_pred CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 446 RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 446 GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 91 ~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH 123 (325)
T 3kn6_A 91 GELFERIKKKK------HFSETEASYIMRKLVSAVSHMH 123 (325)
T ss_dssp CBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998643 6899999999999999999999
No 276
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.25 E-value=1.3e-12 Score=127.44 Aligned_cols=81 Identities=19% Similarity=0.302 Sum_probs=68.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~~ 433 (549)
..+.|...+.||+|+||.||+|...+.. . ++++.. .
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 87 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----N 87 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----C
Confidence 4557888899999999999999986432 1 566666 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 88 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH 132 (294)
T 2rku_A 88 DFVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLH 132 (294)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999987543 6899999999999999999999
No 277
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.25 E-value=4.3e-12 Score=126.27 Aligned_cols=88 Identities=16% Similarity=0.252 Sum_probs=67.7
Q ss_pred cccccCcC-CCccccCceecEEEEEeCC-Cce-------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSS-SNMIGQGSFGSVYKGILGE-KWT-------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~-~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------~g~~~~~~~~~~~~~~l 438 (549)
...++|.. .++||+|+||.||+|.... +.. ++++... ..+....++
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~~l 103 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENM-HHGKRCLLI 103 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCceEEE
Confidence 56678887 4579999999999999863 322 3333321 111345799
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 104 v~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~ql~~~l~~LH 145 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERG----DQAFTEREAAEIMRDIGTAIQFLH 145 (336)
T ss_dssp EEECCTTEEHHHHHHTC-----CCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998653 346999999999999999999999
No 278
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.25 E-value=2.2e-12 Score=124.98 Aligned_cols=81 Identities=15% Similarity=0.219 Sum_probs=68.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
-.++|...+.||+|+||.||+|..... .. ++++.. ..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 78 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ES 78 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----CC
Confidence 457888899999999999999987542 21 466665 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 79 ~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH 122 (284)
T 3kk8_A 79 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCH 122 (284)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999987643 5899999999999999999999
No 279
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.24 E-value=6.5e-12 Score=127.16 Aligned_cols=86 Identities=19% Similarity=0.236 Sum_probs=66.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEecc-ccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGT-DFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~-~~~~ 432 (549)
...++|...+.||+|+||+||+|+... +.. ++++... .+..
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 130 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE 130 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence 445679999999999999999999753 332 3333221 1122
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++|||||+ |+|.+++...+ .+++.+...|+.|++.||+|||
T Consensus 131 ~~~~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH 175 (398)
T 4b99_A 131 FKSVYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMH 175 (398)
T ss_dssp CCCEEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999996 78999998643 6999999999999999999999
No 280
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.24 E-value=3e-12 Score=123.53 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=56.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|+... +.. ++++.. .
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 85 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----K 85 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----C
Confidence 45679999999999999999998643 221 456655 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+ +|++.+++.... .+++..+..++.|+++|+.|||
T Consensus 86 ~~~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH 129 (275)
T 2eue_A 86 DEIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCH 129 (275)
T ss_dssp SCEEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7889999998 778888887543 5899999999999999999999
No 281
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.24 E-value=3.5e-12 Score=126.44 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=62.3
Q ss_pred CccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCceEEEEEe
Q 039925 401 NMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGIDFKAVVFD 441 (549)
Q Consensus 401 ~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~~~~lv~e 441 (549)
+.||+|+||.||+|+... +.. ++++.. .+..++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-----~~~~~lv~e 109 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-----TSEIILILE 109 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SSEEEEEEE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-----CCeEEEEEE
Confidence 789999999999998763 222 455555 678899999
Q ss_pred ecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 442 YMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 442 y~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|+++|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 110 ~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~ql~~~L~~LH 148 (327)
T 3lm5_A 110 YAAGGEIFSLCLPEL----AEMVSENDVIRLIKQILEGVYYLH 148 (327)
T ss_dssp CCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999997543 356899999999999999999999
No 282
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.24 E-value=3e-12 Score=127.62 Aligned_cols=82 Identities=18% Similarity=0.226 Sum_probs=69.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~l 438 (549)
...++|...+.||+|+||.||+|+...... ++++.. ....++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~l 93 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD-----GKYVYV 93 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEc-----CCEEEE
Confidence 345678888999999999999999754321 466665 778999
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 94 v~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH 133 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLH 133 (342)
T ss_dssp EECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 5899999999999999999999
No 283
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.24 E-value=7.4e-12 Score=124.47 Aligned_cols=82 Identities=22% Similarity=0.265 Sum_probs=67.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce--------------------------------------------eEEEec
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------------AGYSEG 427 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------------~g~~~~ 427 (549)
...++|...+.||+|+||.||+|+...... ++++..
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 345678888999999999999998643221 455555
Q ss_pred cccCCCceEEEEEeecCCC-CcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNR-SLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~G-sL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+..| +|.+++.... .+++..+..++.|+++||+|||
T Consensus 101 -----~~~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH 147 (335)
T 3dls_A 101 -----QGFFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLR 147 (335)
T ss_dssp -----SSEEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCEEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 67889999999877 9999998643 5899999999999999999999
No 284
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.3e-11 Score=123.44 Aligned_cols=104 Identities=16% Similarity=0.087 Sum_probs=77.8
Q ss_pred EEEccCC-cceecCCccccCCCCCCEeeccc-ccccccCCcccccccCccceeeecccccccccccccCCCCCCCEEEee
Q 039925 61 FINLVDN-NFRGEIPEKVGRLFRLEYLLLAN-NHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSAIQVMIFK 138 (549)
Q Consensus 61 ~L~L~~n-~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 138 (549)
.++.+++ +++ .+|. |..+++|++|+|++ |.|++..|..|..+++| ++|+|++|+|++..|..|.++++|++|+|+
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGEL-RNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCC-SEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCC-CEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 4577777 777 6777 88888888888885 88886555678888888 888888888887777778888888888888
Q ss_pred cceeeeeCCccccCCCCCCEEecccCccee
Q 039925 139 ENSLEGKFPNTLSNLRSLFYDNINRNEFSG 168 (549)
Q Consensus 139 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 168 (549)
+|+|++..+..|..++ |++|+|.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8888744444444444 8888888877763
No 285
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.23 E-value=2.8e-12 Score=129.43 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=59.7
Q ss_pred CcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceEEEEE
Q 039925 397 FSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+...+.||+|+||.||+|.... +.. ++++.. .+..++||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~lv~ 165 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-----KNDIVLVM 165 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSEEEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEEEEE
Confidence 3446679999999999998753 322 566666 67899999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||+++|+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 166 E~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 204 (373)
T 2x4f_A 166 EYVDGGELFDRIIDES-----YNLTELDTILFMKQICEGIRHMH 204 (373)
T ss_dssp ECCTTCEEHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 46899999999999999999999
No 286
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.23 E-value=7.6e-12 Score=127.16 Aligned_cols=84 Identities=14% Similarity=0.060 Sum_probs=70.8
Q ss_pred cccccCcCCCccccC--ceecEEEEEeCC-Cce-------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQG--SFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G--~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+| +||.||+|+... +.. ++++..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 97 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA---- 97 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE----
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE----
Confidence 356678999999999 999999999863 322 466666
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++|||||++|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~LH 145 (389)
T 3gni_B 98 -DNELWVVTSFMAYGSAKDLICTHF----MDGMNELAIAYILQGVLKALDYIH 145 (389)
T ss_dssp -TTEEEEEEECCTTCBHHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEEccCCCCHHHHHhhhc----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999998653 245899999999999999999999
No 287
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.23 E-value=4.1e-12 Score=127.27 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=65.3
Q ss_pred cccCcCCCccccCceecEEEEEeCC---------Cce-------------------------------------------
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE---------KWT------------------------------------------- 421 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~------------------------------------------- 421 (549)
.++|...+.||+|+||.||+|+... +..
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 4689999999999999999999764 221
Q ss_pred --eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 --AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 --~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.. .....++||||+ +|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 121 ~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH 176 (352)
T 2jii_A 121 TCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLH 176 (352)
T ss_dssp CCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcccc----CCcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112221 146789999999 999999998642 246999999999999999999999
No 288
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.23 E-value=2.9e-12 Score=124.20 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=68.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|+...... ++++.. .
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 86 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-----R 86 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-----C
Confidence 34678889999999999999999864331 456655 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 131 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCH 131 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999998643 5889999999999999999999
No 289
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.23 E-value=4.2e-12 Score=126.25 Aligned_cols=80 Identities=21% Similarity=0.216 Sum_probs=67.9
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
.++|...+.||+|+||.||+|+... +.. .+++.. .+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-----SS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-----CC
Confidence 4678889999999999999999753 322 455655 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 122 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLH 122 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998643 5889999999999999999999
No 290
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.23 E-value=3.7e-12 Score=124.59 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=68.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCce
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~ 435 (549)
...+.|...+.||+|+||.||+|.... +.. ++++.. .+.
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 90 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-----DGK 90 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----C-C
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-----CCe
Confidence 455678888899999999999999864 322 466665 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... ..+++..+..++.|+++||.|||
T Consensus 91 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH 134 (302)
T 2j7t_A 91 LWIMIEFCPGGAVDAIMLELD-----RGLTEPQIQVVCRQMLEALNFLH 134 (302)
T ss_dssp EEEEEECCTTEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999987543 45899999999999999999999
No 291
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.23 E-value=4.1e-12 Score=131.06 Aligned_cols=81 Identities=14% Similarity=0.092 Sum_probs=66.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
-.++|...+.||+|+||.||+|.... +.. ++++.. .+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----EG 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-----SS
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-----CC
Confidence 45678888999999999999998643 221 466665 77
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|+++|++|||
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH 127 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCH 127 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998654 5899999999999999999999
No 292
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.23 E-value=1.7e-12 Score=129.18 Aligned_cols=82 Identities=18% Similarity=0.297 Sum_probs=69.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~ 432 (549)
...+.|...+.||+|+||.||++...+.. . ++++..
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 112 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 112 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 45567888999999999999999975432 1 566666
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH 158 (335)
T 2owb_A 113 NDFVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLH 158 (335)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999987543 6899999999999999999999
No 293
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.22 E-value=5.9e-12 Score=126.07 Aligned_cols=85 Identities=16% Similarity=0.129 Sum_probs=68.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~ 431 (549)
..+.|...+.||+|+||.||+|+... +.. ++++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 97 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS---- 97 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE----
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 34568888999999999999998753 221 455655
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .....+++.....++.|+++||+|||
T Consensus 98 -~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~qi~~al~~lH 147 (351)
T 3c0i_A 98 -DGMLYMVFEFMDGADLCFEIVKRA--DAGFVYSEAVASHYMRQILEALRYCH 147 (351)
T ss_dssp -TTEEEEEEECCSSCBHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEeCCCCCCHHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999998886432 01235889999999999999999999
No 294
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.22 E-value=3.4e-12 Score=128.36 Aligned_cols=81 Identities=15% Similarity=0.219 Sum_probs=68.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|..... .. ++++.. .+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 456788899999999999999987532 21 466666 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH 145 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCH 145 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999997543 6899999999999999999999
No 295
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.22 E-value=5.6e-12 Score=124.55 Aligned_cols=81 Identities=20% Similarity=0.214 Sum_probs=67.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------------eEEEecccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------------~g~~~~~~~ 430 (549)
..+.|...+.||+|+||.||+|+... +.. ++++..
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 86 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN--- 86 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec---
Confidence 45678888999999999999998753 221 455555
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 87 --~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH 132 (321)
T 2a2a_A 87 --RTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLH 132 (321)
T ss_dssp --SSEEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999997543 6899999999999999999999
No 296
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.22 E-value=3.2e-12 Score=123.73 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=66.6
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------------eEEEeccccCC
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------------~g~~~~~~~~~ 432 (549)
++|...+.||+|+||.||+|+... +.. .+++..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN----- 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-----
Confidence 567888899999999999998753 221 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH 125 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLH 125 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999997543 5899999999999999999999
No 297
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.21 E-value=1.8e-12 Score=129.20 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=68.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce---------------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~---------------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|+.... .. ++++..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~----- 89 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT----- 89 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-----
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-----
Confidence 457899999999999999999998643 21 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 90 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 135 (345)
T 1xjd_A 90 KENLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLH 135 (345)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998643 5899999999999999999999
No 298
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.21 E-value=9.2e-12 Score=122.32 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=66.8
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|+... +.. ++++.. .+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-----KRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-----CCeE
Confidence 567888899999999999999854 322 566665 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++... .+++.....++.|+++||+|||
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH 119 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCH 119 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887543 5899999999999999999999
No 299
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.21 E-value=6.6e-12 Score=127.35 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=69.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~ 431 (549)
...++|...++||+|+||.||+|+...... ++++..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~---- 124 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT---- 124 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE----
Confidence 356789999999999999999999865432 455555
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|..+++... .+++.....++.|++.||+|||
T Consensus 125 -~~~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH 170 (396)
T 4dc2_A 125 -ESRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLH 170 (396)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 5899999999999999999999
No 300
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.21 E-value=1.2e-11 Score=120.76 Aligned_cols=88 Identities=17% Similarity=0.115 Sum_probs=64.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cc-e-----------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KW-T-----------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~-~-----------------------------------~g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|.... +. + ++++.. .+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-----KD 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-----SS
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----cC
Confidence 356789999999999999999998632 22 1 455555 66
Q ss_pred eEEEEEeecCCCCcccccccCC--CCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSN--NKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~--~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .......+++..+..++.|+++||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 138 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999987421 0012346899999999999999999999
No 301
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.20 E-value=3.8e-12 Score=127.35 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=67.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|+... +.. ++++..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~----- 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT----- 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-----
Confidence 45689999999999999999999754 322 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 141 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLH 141 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998654 5899999999999999999999
No 302
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.20 E-value=1.2e-11 Score=124.35 Aligned_cols=82 Identities=18% Similarity=0.197 Sum_probs=69.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~------------------------------------~g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|..... .. ++++.. .+
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 104 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 104 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TT
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CC
Confidence 3456899999999999999999998632 22 466665 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++++... .+++.....++.++++||+|||
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh 148 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLR 148 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998653 5889999999999999999999
No 303
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.20 E-value=4.9e-12 Score=126.87 Aligned_cols=81 Identities=15% Similarity=0.109 Sum_probs=67.0
Q ss_pred ccccCcCCCccccCceecEEEEEeC----CCce----------------------------------------eEEEecc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG----EKWT----------------------------------------AGYSEGT 428 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~----------------------------------------~g~~~~~ 428 (549)
..++|...+.||+|+||.||+|+.. ++.. .+++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 130 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 130 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-
Confidence 4478999999999999999999873 2221 344444
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 131 ----~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 176 (355)
T 1vzo_A 131 ----ETKLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLH 176 (355)
T ss_dssp ----TTEEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CceEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999998643 5889999999999999999999
No 304
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.20 E-value=6.6e-12 Score=125.54 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=69.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|+... +.. .+++..
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 112 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD----- 112 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----
Confidence 455789999999999999999999753 322 355555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 113 ~~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 158 (350)
T 1rdq_E 113 NSNLYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLH 158 (350)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 5889999999999999999999
No 305
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.20 E-value=6.3e-12 Score=123.68 Aligned_cols=83 Identities=25% Similarity=0.272 Sum_probs=63.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...+.|...+.||+|+||.||+|.... +.. ++++.. ....+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 100 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NTDLW 100 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEEE
Confidence 456678888999999999999999864 322 466665 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... ..+++..+..++.++++||.|||
T Consensus 101 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH 142 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRN-----KTLTEDEIATILQSTLKGLEYLH 142 (314)
T ss_dssp EEEECCTTEEHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997432 46899999999999999999999
No 306
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.19 E-value=1.9e-11 Score=119.91 Aligned_cols=88 Identities=16% Similarity=0.239 Sum_probs=64.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------------eEEEec
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------------AGYSEG 427 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------------~g~~~~ 427 (549)
..++.|...+.||+|+||.||+|+... +.. ++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 356789999999999999999998532 221 344443
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.........++||||++ |+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH 137 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP----PPGLPAETIKDLMRQFLRGLDFLH 137 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCC----TTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11111225789999998 69999998654 344899999999999999999999
No 307
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.19 E-value=6.5e-12 Score=130.08 Aligned_cols=82 Identities=22% Similarity=0.210 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|.... +.. .+++..
T Consensus 145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----- 219 (446)
T 4ejn_A 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT----- 219 (446)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-----
T ss_pred CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-----
Confidence 356789999999999999999998643 221 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++|||||++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 678899999999999999997643 6899999999999999999999
No 308
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.19 E-value=9.1e-12 Score=121.07 Aligned_cols=82 Identities=23% Similarity=0.279 Sum_probs=64.4
Q ss_pred cCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCceEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
.|...+.||+|+||.||+|....... ++++... .......+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceEE
Confidence 35667789999999999998754432 3333321 12245689
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 106 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 146 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLH 146 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998643 5889999999999999999999
No 309
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.19 E-value=9.9e-12 Score=122.22 Aligned_cols=82 Identities=13% Similarity=0.238 Sum_probs=68.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|+..++.. ++++.. +.
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 92 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-----ER 92 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-----SS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-----CC
Confidence 456788899999999999999999866543 455555 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++ +|.+++.... ..+++.....++.|+++||+|||
T Consensus 93 ~~~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH 136 (311)
T 3niz_A 93 CLTLVFEFMEK-DLKKVLDENK-----TGLQDSQIKIYLYQLLRGVAHCH 136 (311)
T ss_dssp CEEEEEECCSE-EHHHHHHTCT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCC-CHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999984 8888887543 45889999999999999999999
No 310
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.19 E-value=1.6e-11 Score=122.65 Aligned_cols=83 Identities=16% Similarity=0.276 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------------------
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------------------- 421 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------------------- 421 (549)
..++|...+.||+|+||.||+|...+..+
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45688999999999999999998732211
Q ss_pred eEEEeccccCCCceEEEEEeecCCCCcccc------cccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 AGYSEGTDFKGIDFKAVVFDYMQNRSLEDW------PYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 ~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~------l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.. .+..++||||+++|+|.++ +.... ...+++..+..++.|+++||+|||
T Consensus 109 ~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH 168 (348)
T 2pml_X 109 EGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIH 168 (348)
T ss_dssp SEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHh
Confidence 344444 5788999999999999999 55421 357899999999999999999999
No 311
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.19 E-value=3.5e-11 Score=118.47 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=64.7
Q ss_pred ccCcC-CCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSS-SNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~-~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
+.|.. ++.||+|+||.||+|.... +.. ++++.. .+..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-----~~~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-----EDRF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----CCEE
Confidence 34555 4789999999999998642 221 456665 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH 128 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLH 128 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 5889999999999999999999
No 312
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.19 E-value=5.9e-12 Score=127.22 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=69.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|....... ++++.. .
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~ 87 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-----E 87 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----S
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----C
Confidence 45678899999999999999999764331 456665 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH 132 (384)
T 4fr4_A 88 EDMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQ 132 (384)
T ss_dssp SEEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999998643 6899999999999999999999
No 313
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.19 E-value=1.3e-11 Score=120.48 Aligned_cols=82 Identities=23% Similarity=0.283 Sum_probs=62.4
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------------------
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------------------- 421 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------------------- 421 (549)
..++|...+.||+|+||.||+|+......
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 45678889999999999999997643211
Q ss_pred -----------eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 -----------AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 -----------~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.. ......++||||+++|+|.+++.. ..+++.....++.|+++||+|||
T Consensus 91 ~~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH 154 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLH 154 (298)
T ss_dssp HTCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 222222 124578999999999999998653 35899999999999999999999
No 314
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.2e-11 Score=121.22 Aligned_cols=83 Identities=13% Similarity=0.228 Sum_probs=63.2
Q ss_pred cccCcCCCccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCCC
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~~ 433 (549)
.++|...+.||+|+||.||+|...... . ++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---EK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---CC
Confidence 467899999999999999999975432 1 4555321 14
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++| +.+++.... ...+++..+..++.|+++||+|||
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH 126 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVP----EKRFPVCQAHGYFCQLIDGLEYLH 126 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHST----TCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEehhccCC-HHHHHHhCc----ccccCHHHHHHHHHHHHHHHHHHH
Confidence 5789999999987 777776433 346899999999999999999999
No 315
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.19 E-value=1.9e-11 Score=122.33 Aligned_cols=79 Identities=22% Similarity=0.288 Sum_probs=65.2
Q ss_pred cccccCcCCCccccCceecEEEEEeC--C--Cc-e---------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG--E--KW-T---------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~--~~-~---------------------------------~g~~~~~~~~~~ 433 (549)
...+.|...+.||+|+||+||+|+.+ . +. + ++++.. .
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-----~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRK-----N 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-----T
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEE-----C
Confidence 34577999999999999999999753 1 11 1 344555 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++|||||++|+|.++++ .+++.+...++.|++.|++|||
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH 134 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIH 134 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCcccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999985 3788888999999999999999
No 316
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.19 E-value=7.1e-12 Score=125.06 Aligned_cols=88 Identities=18% Similarity=0.164 Sum_probs=66.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~ 430 (549)
...+.|...+.||+|+||.||+|+...... ++++..
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--- 99 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED--- 99 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc---
Confidence 456788899999999999999998753321 566666
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCC----------------------------------CCCCCchhhhHHHHHHH
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKL----------------------------------KPSSLSMIRKLSTTIDV 476 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~----------------------------------~~~~l~~~~~~~ia~~v 476 (549)
.+..++||||+++|+|.+++....... ....+++.....++.|+
T Consensus 100 --~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 100 --EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp --SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 678999999999999999986211000 01123566778899999
Q ss_pred HHHHHHhh
Q 039925 477 ASAIEYLR 484 (549)
Q Consensus 477 a~gl~yLH 484 (549)
++||+|||
T Consensus 178 ~~~l~~LH 185 (345)
T 3hko_A 178 FSALHYLH 185 (345)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999999
No 317
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.19 E-value=2.1e-11 Score=118.41 Aligned_cols=79 Identities=19% Similarity=0.274 Sum_probs=65.7
Q ss_pred ccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||+|...++.. ++++.. .+..+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 76 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-----KKRLV 76 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-----SSCEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-----CCeEE
Confidence 467778899999999999999864443 455655 67889
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++ +|.+++.... ..+++.....++.|+++||+|||
T Consensus 77 lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 117 (288)
T 1ob3_A 77 LVFEHLDQ-DLKKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCH 117 (288)
T ss_dssp EEEECCSE-EHHHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCC-CHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999985 9999887543 46889999999999999999999
No 318
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.18 E-value=8e-12 Score=127.36 Aligned_cols=87 Identities=14% Similarity=0.223 Sum_probs=64.5
Q ss_pred ccccCcCC-CccccCceecEEEEEeCC-Cce-------------------------------eEEEeccccCCCceEEEE
Q 039925 393 VTNEFSSS-NMIGQGSFGSVYKGILGE-KWT-------------------------------AGYSEGTDFKGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~-~~lG~G~~g~Vy~~~~~~-~~~-------------------------------~g~~~~~~~~~~~~~~lv 439 (549)
..++|... ++||+|+||.||+|.... +.. ++++.. .+.+....++|
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~-~~~~~~~~~lv 137 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYEN-LYAGRKCLLIV 137 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEE-EETTEEEEEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEee-cccCCcEEEEE
Confidence 34455554 689999999999999753 322 333321 01124568999
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++|+|.++++... ...+++..+..++.|+++||+|||
T Consensus 138 ~E~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH 178 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRG----DQAFTEREASEIMKSIGEAIQYLH 178 (400)
T ss_dssp EECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998643 346999999999999999999999
No 319
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.18 E-value=6.9e-12 Score=125.47 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=67.8
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|+..+... .+++..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-----
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-----
Confidence 45688889999999999999999865321 344444
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 138 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQ 138 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 5899999999999999999999
No 320
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.18 E-value=6.1e-12 Score=123.70 Aligned_cols=86 Identities=13% Similarity=0.224 Sum_probs=66.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...+.|...+.||+|+||.||+|+... +.. ++++.... ..
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 87 (311)
T 3ork_A 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PA 87 (311)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TT
T ss_pred eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CC
Confidence 345678889999999999999999643 221 33333210 01
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++... .+++.....++.|+++||+|||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 133 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH 133 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 123489999999999999998643 5899999999999999999999
No 321
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.18 E-value=4.1e-12 Score=123.40 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=66.9
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|.... +.. ++++.. ++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-----~~ 79 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----EG 79 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-----cC
Confidence 45788899999999999999999743 322 466665 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++ |+|.++++... .....+++..+..++.|+++||+|||
T Consensus 80 ~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH 126 (290)
T 3fme_A 80 DVWICMELMD-TSLDKFYKQVI--DKGQTIPEDILGKIAVSIVKALEHLH 126 (290)
T ss_dssp SEEEEEECCS-EEHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEehhc-cchHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 8899999998 58888776421 01246899999999999999999999
No 322
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.18 E-value=2e-11 Score=128.42 Aligned_cols=82 Identities=13% Similarity=0.191 Sum_probs=66.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-------------------------------------------------e
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------------------A 422 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------------------~ 422 (549)
...+.|...+.||+|+||.||+|....+.. +
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 456788899999999999999998753221 3
Q ss_pred EEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 423 GYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 423 g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+++.. ....++||||+++|+|.+++.... .+++..+..++.|++.||+|||
T Consensus 113 ~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH 163 (504)
T 3q5i_A 113 DVFED-----KKYFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLH 163 (504)
T ss_dssp EEEEC-----SSEEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEc-----CCEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 44544 677899999999999999997643 5899999999999999999999
No 323
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.18 E-value=8.4e-12 Score=121.77 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=67.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCC-ce---------------------------------------------eEEEe
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEK-WT---------------------------------------------AGYSE 426 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~---------------------------------------------~g~~~ 426 (549)
-.++|...+.||+|+||.||+|..... .. ++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 456788889999999999999987532 21 34454
Q ss_pred ccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 427 GTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 427 ~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
. ....++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 95 ~-----~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 141 (298)
T 1phk_A 95 T-----NTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALH 141 (298)
T ss_dssp C-----SSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred c-----CCeEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 4 677899999999999999998643 5899999999999999999999
No 324
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.18 E-value=9.6e-12 Score=130.55 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=65.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
..+.|...+.||+|+||.||+|+...... ++++.. ..
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 109 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-----KR 109 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CC
Confidence 44568888999999999999999753221 566666 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 110 ~~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH 153 (494)
T 3lij_A 110 NYYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLH 153 (494)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999987543 5889999999999999999999
No 325
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.17 E-value=5.8e-12 Score=126.93 Aligned_cols=82 Identities=23% Similarity=0.230 Sum_probs=68.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~ 431 (549)
...++|...+.||+|+||.||+|+...... ++++..
T Consensus 35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~---- 110 (373)
T 2r5t_A 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT---- 110 (373)
T ss_dssp CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC----
T ss_pred CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe----
Confidence 355789999999999999999999764322 344444
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 111 -~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 156 (373)
T 2r5t_A 111 -ADKLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLH 156 (373)
T ss_dssp -SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998643 5888888999999999999999
No 326
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.17 E-value=1.3e-11 Score=121.94 Aligned_cols=80 Identities=18% Similarity=0.225 Sum_probs=64.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce--------------------------------------------eEEEecc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------------AGYSEGT 428 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------------~g~~~~~ 428 (549)
..++|...+.||+|+||.||+|....... ++++.
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-- 85 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 85 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc--
Confidence 34678888999999999999998754221 23333
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++... ..+++.....++.|+++||+|||
T Consensus 86 ----~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH 131 (322)
T 2ycf_A 86 ----AEDYYIVLELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLH 131 (322)
T ss_dssp ----SSSEEEEEECCTTEETHHHHSTT------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEEecCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 23479999999999999998754 36889999999999999999999
No 327
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.17 E-value=8.1e-12 Score=124.43 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=68.2
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|+.. ++.. ++++.. .
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-----~ 122 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----E 122 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-----S
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-----C
Confidence 46778888999999999999999974 3322 566666 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++ +|.+++.... .....+++..+..++.|+++||+|||
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~l~~lH 170 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQVI--DKGQTIPEDILGKIAVSIVKALEHLH 170 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHHH--HTSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEHHHhhC-cHHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 789999999985 9998886421 01246899999999999999999999
No 328
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.17 E-value=4.7e-12 Score=126.54 Aligned_cols=82 Identities=23% Similarity=0.231 Sum_probs=66.7
Q ss_pred cccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...+.|...+.||+|+||.||+|+.. ++.. ++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 125 (348)
T 1u5q_A 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR----- 125 (348)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----
T ss_pred chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----
Confidence 44566888889999999999999864 3322 566666
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||++ |++.+++.... ..+++..+..++.|+++||+|||
T Consensus 126 ~~~~~lv~e~~~-g~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH 171 (348)
T 1u5q_A 126 EHTAWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLH 171 (348)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999998 78888886433 46899999999999999999999
No 329
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.17 E-value=1e-11 Score=123.94 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=68.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce----------------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------~g~~~~~~~~~ 432 (549)
..++|...+.||+|+||.||+|+...... ++++..
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 81 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----- 81 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----
Confidence 34678889999999999999999864321 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH 127 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLH 127 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998643 5899999999999999999999
No 330
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.17 E-value=1e-11 Score=121.70 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccccCCCceE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~~~~~~~ 436 (549)
..+.|...+.||+|+||.||+|+... +.. .+++.. ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 81 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-----TTHY 81 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-----CCEE
Confidence 34567888899999999999998752 322 455555 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.+++.... .+++.....++.|+++||.|||
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 123 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLH 123 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987543 5889999999999999999999
No 331
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.17 E-value=1.4e-11 Score=122.31 Aligned_cols=82 Identities=16% Similarity=0.258 Sum_probs=69.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|+... +.. ++++.. .
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 96 (331)
T 4aaa_A 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-----K 96 (331)
T ss_dssp BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-----C
Confidence 566788889999999999999999864 222 566666 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+++++|.+++.... .+++..+..++.|+++||+|||
T Consensus 97 ~~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH 141 (331)
T 4aaa_A 97 KRWYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCH 141 (331)
T ss_dssp TEEEEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999998876433 5899999999999999999999
No 332
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.16 E-value=1.4e-11 Score=121.35 Aligned_cols=80 Identities=21% Similarity=0.216 Sum_probs=68.1
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCCc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~~ 434 (549)
.++|...+.||+|+||.||+|+... +.. ++++.. ..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-----AQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----SS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----CC
Confidence 4678888999999999999999753 322 456665 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.++++... .+++.....++.|++.||+|||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLH 123 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998643 5889999999999999999999
No 333
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.16 E-value=1.3e-11 Score=122.59 Aligned_cols=88 Identities=11% Similarity=0.072 Sum_probs=65.7
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccc---cCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTD---FKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~---~~~ 432 (549)
...+|...+.||+|+||.||+|+... +.. ++++.... ...
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 34578888999999999999999743 222 34442110 122
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+. |+|.+++.... ....+++..+..++.|+++||+|||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKME---SRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHH---TTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEecC-CCHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456799999996 79999987532 2346999999999999999999999
No 334
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.16 E-value=2.2e-11 Score=120.07 Aligned_cols=85 Identities=15% Similarity=0.281 Sum_probs=54.0
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceE
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~ 436 (549)
.++|...+.||+|+||.||+|.... +.. ++++.. .+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-----ENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-----TTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-----CCeE
Confidence 4678899999999999999998753 221 455655 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++ |+|.+++...........+++..+..++.|+++||+|||
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH 125 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999 699999875431122346889999999999999999999
No 335
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.16 E-value=1.2e-11 Score=123.30 Aligned_cols=80 Identities=18% Similarity=0.228 Sum_probs=67.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~ 433 (549)
..+.|...+.||+|+||.||+|...++.. ++++.. .
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-----~ 81 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----D 81 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-----C
Confidence 34568888999999999999998766543 455555 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||| +.+|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH 125 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 125 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEe-CCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999 57889999998653 6889999999999999999999
No 336
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.16 E-value=1.8e-11 Score=119.43 Aligned_cols=80 Identities=16% Similarity=0.267 Sum_probs=65.7
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|+... +.. ++++.. .+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CCce
Confidence 578888899999999999998753 322 455655 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||++ |+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH 120 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASA----LTGIPLPLIKSYLFQLLQGLAFCH 120 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccc-CCHHHHHHhhh----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998 69999987643 245888899999999999999999
No 337
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.16 E-value=3e-11 Score=121.61 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=67.5
Q ss_pred ccccCcCCCccccCceecEEEEEeC-CCce--------------------------------------------eEEEec
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILG-EKWT--------------------------------------------AGYSEG 427 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--------------------------------------------~g~~~~ 427 (549)
..++|...+.||+|+||.||+|+.. ++.. ++++..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 3456888899999999999999985 3332 344444
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .+++..+..++.|+++||.|||
T Consensus 172 -----~~~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH 217 (365)
T 2y7j_A 172 -----SSFMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLH 217 (365)
T ss_dssp -----SSEEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCEEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999998543 6899999999999999999999
No 338
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.15 E-value=4.8e-11 Score=120.13 Aligned_cols=87 Identities=15% Similarity=0.099 Sum_probs=68.8
Q ss_pred cccccCcCCCccccCceecEEEEEeC------CCce-----------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG------EKWT-----------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~-----------------------------------~g~~~~~~~ 430 (549)
...+.|...+.||+|+||.||+|++. .+.. ++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~--- 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF--- 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC---
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeec---
Confidence 45677888899999999999999532 2221 455655
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++|||||++|+|.++++.... .....++|..+..|+.|+++||+|||
T Consensus 139 --~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~lH 189 (365)
T 3e7e_A 139 --QNGSVLVGELYSYGTLLNAINLYKN-TPEKVMPQGLVISFAMRMLYMIEQVH 189 (365)
T ss_dssp --SSCEEEEECCCCSCBHHHHHHHHHT-STTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcEEEEeccCCCcHHHHHHHhhc-ccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 6788999999999999999975320 12346999999999999999999999
No 339
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.15 E-value=1.2e-11 Score=130.63 Aligned_cols=84 Identities=20% Similarity=0.267 Sum_probs=70.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...++||+|+||.||+|+... +.. ++++..
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~----- 255 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET----- 255 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----
Confidence 456789999999999999999999753 332 455555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~~----~~~l~e~~~~~i~~qIl~aL~yLH 303 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHMG----QAGFPEARAVFYAAEICCGLEDLH 303 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSSS----SCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999997643 345899999999999999999999
No 340
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.15 E-value=1.3e-11 Score=119.77 Aligned_cols=80 Identities=21% Similarity=0.167 Sum_probs=67.2
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCce
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDF 435 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~ 435 (549)
.+.|...+.||+|+||.||+|+... +.. ++++.. ...
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 95 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SSS 95 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-----CCe
Confidence 4578888999999999999998753 221 455655 678
Q ss_pred EEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH 138 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMH 138 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987543 5899999999999999999999
No 341
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.14 E-value=1.5e-11 Score=120.13 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=66.1
Q ss_pred cccCcCCCccccCceecEEEEEeC-CCce----------------------------------eEEEeccc--------c
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILG-EKWT----------------------------------AGYSEGTD--------F 430 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----------------------------------~g~~~~~~--------~ 430 (549)
.++|...+.||+|+||.||+|+.. ++.. ++++.... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 467888899999999999999975 3322 34433210 0
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
......++||||+++|+|.++++... ..+++.....++.|+++||+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH 133 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIH 133 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHH
Confidence 11456899999999999999998543 45778888999999999999999
No 342
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.14 E-value=1.8e-11 Score=120.90 Aligned_cols=82 Identities=21% Similarity=0.272 Sum_probs=66.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce--------------------------------------------eEEEec
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------------AGYSEG 427 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------------~g~~~~ 427 (549)
...++|...+.||+|+||.||+|+...... ++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 456678899999999999999998643221 334443
Q ss_pred cccCCCceEEEEEeecCC-CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQN-RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~-GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+.+ |+|.+++.... .+++..+..++.|+++||+|||
T Consensus 120 -----~~~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 120 -----PDSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp -----SSEEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCcEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999986 89999998643 5889999999999999999999
No 343
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.14 E-value=1.7e-11 Score=133.16 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=67.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~~ 432 (549)
..++|...++||+|+||.||+|+..+.. . .+++..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~----- 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-----
Confidence 4568889999999999999999976432 1 233333
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... .+++..+..++.||+.||+|||
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH 459 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQ 459 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999998653 5899999999999999999999
No 344
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.14 E-value=2.2e-11 Score=127.54 Aligned_cols=81 Identities=21% Similarity=0.166 Sum_probs=68.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
..+.|...+.||+|+||.||+|+... +.. ++++.. ..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SS 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-----CC
Confidence 44578888999999999999999753 322 466665 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... .+++.....++.|+++||.|||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH 138 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMH 138 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999987643 5899999999999999999999
No 345
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.13 E-value=3.7e-11 Score=119.12 Aligned_cols=81 Identities=19% Similarity=0.308 Sum_probs=66.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|+.... .. ++++.. .
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 105 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-----N 105 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-----T
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-----C
Confidence 4667899999999999999999986432 21 455655 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||++ |+|.+++.... .+++..+..++.|+++||+|||
T Consensus 106 ~~~~lv~e~~~-~~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH 149 (329)
T 3gbz_A 106 HRLHLIFEYAE-NDLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCH 149 (329)
T ss_dssp TEEEEEEECCS-EEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCC-CCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999998 59999998653 5889999999999999999999
No 346
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.13 E-value=1.5e-11 Score=120.89 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=60.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e---------------------------------------------eEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T---------------------------------------------AGYS 425 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------------~g~~ 425 (549)
...++|...+.||+|+||.||+|+..... . ++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34567999999999999999999864322 1 2223
Q ss_pred eccccCCCceEEEEEee-cCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 426 EGTDFKGIDFKAVVFDY-MQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 426 ~~~~~~~~~~~~lv~ey-~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.. .+..++|||| +++|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 108 ~~-----~~~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH 156 (312)
T 2iwi_A 108 ET-----QEGFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCH 156 (312)
T ss_dssp ----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred ec-----CCeEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 22 4567899999 89999999998643 5899999999999999999999
No 347
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.13 E-value=1.5e-11 Score=121.74 Aligned_cols=82 Identities=11% Similarity=0.044 Sum_probs=67.6
Q ss_pred cccccCcCCCccccCceecEEEEEeC----CCce---------------------------------------eEEEecc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG----EKWT---------------------------------------AGYSEGT 428 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~---------------------------------------~g~~~~~ 428 (549)
...++|...+.||+|+||.||+|+.. ++.. ++++..
T Consensus 14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~- 92 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT- 92 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-
T ss_pred CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-
Confidence 34567889999999999999999873 2222 345554
Q ss_pred ccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 429 DFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 429 ~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.+++.... .+++.....++.|++.||+|||
T Consensus 93 ----~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH 138 (327)
T 3a62_A 93 ----GGKLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLH 138 (327)
T ss_dssp ----SSCEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999998643 5888899999999999999999
No 348
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.13 E-value=1.5e-11 Score=121.67 Aligned_cols=79 Identities=15% Similarity=0.304 Sum_probs=64.9
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~~~~ 437 (549)
++|...+.||+|+||.||+|+... +.. ++++.. ....+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-----SSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-----CCEEE
Confidence 467788899999999999999753 321 455555 67789
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ |+|.+++.... ..+++.....++.|+++||+|||
T Consensus 77 lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH 117 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCG-----NIINMHNVKLFLFQLLRGLAYCH 117 (324)
T ss_dssp EEEECCS-EEHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccc-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999998 59999887643 46889999999999999999999
No 349
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.13 E-value=1.9e-11 Score=124.13 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=65.8
Q ss_pred cccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCCCc
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~~~ 434 (549)
...|...+.||+|+||.||+|...++.. ++++.. .+
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-----~~ 129 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----DQ 129 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SS
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-----CC
Confidence 4468889999999999999998765543 345555 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||| +.+|+|.+++.... .+++..+..++.||++||+|||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH 172 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 172 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999 57899999998643 6888899999999999999999
No 350
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.13 E-value=4.2e-11 Score=116.50 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=62.9
Q ss_pred ccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCceE
Q 039925 395 NEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 395 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~~~ 436 (549)
++|...+.||+|+||.||+|+... +.. ++++.. ....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-----CCEE
Confidence 467788899999999999999754 221 466665 6788
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++ ++.+++.... ..+++.....++.|+++||+|||
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH 118 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCH 118 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC-CHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999986 5555554432 46899999999999999999999
No 351
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.12 E-value=2.1e-11 Score=127.69 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=68.2
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..+.|...+.||+|+||.||+|+... +.. ++++.. .
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~ 98 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-----K 98 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----S
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----C
Confidence 45678888999999999999998752 221 455655 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++|+|.+++.... .+++.....++.|+++||+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH 143 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMH 143 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999997543 6899999999999999999999
No 352
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.12 E-value=6.1e-11 Score=117.23 Aligned_cols=88 Identities=11% Similarity=0.184 Sum_probs=67.9
Q ss_pred cccccCcCCCccccCceecEEEEEeC--CCce----------------------------------------eEEEeccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILG--EKWT----------------------------------------AGYSEGTD 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~----------------------------------------~g~~~~~~ 429 (549)
.+.++|...+.||+|+||.||+|+.. ++.. ++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 56678999999999999999999973 3322 34443111
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.......++||||++ |+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~lH 137 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLH 137 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSC----TTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112567899999998 79999998653 245899999999999999999999
No 353
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.12 E-value=4.2e-11 Score=120.24 Aligned_cols=83 Identities=22% Similarity=0.268 Sum_probs=68.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e---------------------------------------eEEEeccccC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T---------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~---------------------------------------~g~~~~~~~~ 431 (549)
...+.|...+.||+|+||.||+|+..... . ++++..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~---- 107 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY---- 107 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE----
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE----
Confidence 45678999999999999999999984332 1 455555
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+ +|+|.+++.... ...+++.....++.|+++||+|||
T Consensus 108 -~~~~~lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH 154 (360)
T 3llt_A 108 -YDHMCLIFEPL-GPSLYEIITRNN----YNGFHIEDIKLYCIEILKALNYLR 154 (360)
T ss_dssp -TTEEEEEECCC-CCBHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCeeEEEEcCC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 67889999999 999999998654 245889999999999999999999
No 354
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.11 E-value=3.4e-11 Score=121.03 Aligned_cols=87 Identities=14% Similarity=0.147 Sum_probs=67.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce----------------------------------------------eEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT----------------------------------------------AGYS 425 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~----------------------------------------------~g~~ 425 (549)
...+.|...+.||+|+||.||+|...++.. ++++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 98 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF 98 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred HhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence 567899999999999999999998655432 2444
Q ss_pred eccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 426 EGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 426 ~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...+.......++||||++ |+|.+++.... ..+++..+..++.|+++||+|||
T Consensus 99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 151 (362)
T 3pg1_A 99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLH 151 (362)
T ss_dssp EECCTTTCCEEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCcceEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 3221122346799999998 68888887543 46899999999999999999999
No 355
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.11 E-value=1.8e-11 Score=125.89 Aligned_cols=83 Identities=18% Similarity=0.119 Sum_probs=71.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCc-e--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKW-T--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~--------------------------------------~g~~~~~~~~~ 432 (549)
..+++|...++||+|+||.||+|+..... . ++++..
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~----- 145 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD----- 145 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-----
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----
Confidence 56789999999999999999999986533 2 466666
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++|||||++|+|.++++... ..+++.....++.|++.||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~-----~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE-----DRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999998633 46899999999999999999999
No 356
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.10 E-value=3.8e-11 Score=123.53 Aligned_cols=83 Identities=16% Similarity=0.182 Sum_probs=67.4
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~ 430 (549)
.....|...+.||+|+||.||+|....... ++++..
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~--- 170 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--- 170 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE---
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc---
Confidence 345578889999999999999998754321 345555
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||++ |+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 171 --~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH 217 (429)
T 3kvw_A 171 --RNHICMTFELLS-MNLYELIKKNK----FQGFSLPLVRKFAHSILQCLDALH 217 (429)
T ss_dssp --TTEEEEEECCCC-CBHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEeccC-CCHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999996 69999988654 345899999999999999999999
No 357
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.09 E-value=2.1e-11 Score=120.54 Aligned_cols=89 Identities=17% Similarity=0.167 Sum_probs=69.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEecccc-CCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTDF-KGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~~-~~~~ 434 (549)
...+.|...+.||+|+||.||+|+... +.. ++++..... ....
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 567889999999999999999999843 322 344433110 0135
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... ...+++.....++.|++.||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH 146 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLH 146 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCcHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999998643 246888899999999999999999
No 358
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.09 E-value=3.6e-11 Score=118.20 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=67.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce---------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT---------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------------~g~~~~~~~~~ 432 (549)
...+.|...+.||+|+||.||+|...++.. ++++..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~----- 99 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----- 99 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-----
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-----
Confidence 355678899999999999999998766543 355555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||| +.+|+|.+++.... .+++..+..++.|+++||+|||
T Consensus 100 ~~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH 144 (313)
T 3cek_A 100 DQYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 144 (313)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 677899999 67899999998643 6889999999999999999999
No 359
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.09 E-value=2e-11 Score=124.46 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=69.6
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|+.... .. ++++..
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----- 140 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD----- 140 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----
Confidence 5678999999999999999999998643 22 466666
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.++++.. .+++.....++.|++.||+|||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH 185 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIH 185 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999753 3788888999999999999999
No 360
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.08 E-value=4.3e-11 Score=125.91 Aligned_cols=86 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...++||+|+||.||+|+... +.. .+++..
T Consensus 182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~----- 256 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET----- 256 (543)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----
Confidence 456788899999999999999999853 332 355555
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|+|.+++.... .....+++.....++.||+.||+|||
T Consensus 257 ~~~l~lVmE~~~gg~L~~~l~~~~--~~~~~l~e~~~~~~~~qi~~aL~~LH 306 (543)
T 3c4z_A 257 KTDLCLVMTIMNGGDIRYHIYNVD--EDNPGFQEPRAIFYTAQIVSGLEHLH 306 (543)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTSS--TTSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeccCCCHHHHHHHhh--cccccccHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999987543 12346899999999999999999999
No 361
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.08 E-value=8.9e-11 Score=116.52 Aligned_cols=82 Identities=15% Similarity=0.273 Sum_probs=66.7
Q ss_pred ccccCcCCCccccCceecEEEEEe-C-CCce----------------------------------------eEEEecccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGIL-G-EKWT----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~-~-~~~~----------------------------------------~g~~~~~~~ 430 (549)
..+.|...+.||+|+||.||+|.. . ++.. .+++..
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~--- 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH--- 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE---
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc---
Confidence 446788899999999999999987 2 2321 344444
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+ +|+|.+++.... ...+++..+..++.|+++||+|||
T Consensus 89 --~~~~~lv~e~~-~~~l~~~l~~~~----~~~~~~~~~~~~~~qi~~~l~~lH 135 (339)
T 1z57_A 89 --HGHICIVFELL-GLSTYDFIKENG----FLPFRLDHIRKMAYQICKSVNFLH 135 (339)
T ss_dssp --TTEEEEEEECC-CCBHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEEcCC-CCCHHHHHHhcC----CCCCcHHHHHHHHHHHHHHHHHHH
Confidence 67889999999 899999998653 346889999999999999999999
No 362
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.07 E-value=3.3e-11 Score=121.87 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=37.5
Q ss_pred EEEEEeecCCCCcccccccCCC-CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNN-KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~-~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+ +|+|.+++..... ......++|..++.|+.|+++||+|||
T Consensus 175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 223 (377)
T 3byv_A 175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 223 (377)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 78999999 6899999985330 001234567888999999999999999
No 363
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.07 E-value=3.5e-11 Score=122.72 Aligned_cols=83 Identities=13% Similarity=0.137 Sum_probs=70.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~ 432 (549)
...++|...+.||+|+||.||+|+... +.. ++++..
T Consensus 58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~----- 132 (412)
T 2vd5_A 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD----- 132 (412)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC-----
T ss_pred CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----
Confidence 567899999999999999999999853 332 455665
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++|+|.++++... ..+++.....++.+++.||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998643 36889999999999999999999
No 364
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.06 E-value=1.2e-10 Score=115.17 Aligned_cols=85 Identities=15% Similarity=0.135 Sum_probs=65.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
..++|...+.||+|+||.||+|.... +.. ++++.. .+
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-----~~ 94 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-----EG 94 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-----SS
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-----CC
Confidence 45678889999999999999999853 322 566666 67
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++ +|.+++..... .....+++..+..++.++++||.|||
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH 142 (327)
T 3aln_A 95 DCWICMELMST-SFDKFYKYVYS-VLDDVIPEEILGKITLATVKALNHLK 142 (327)
T ss_dssp EEEEEECCCSE-EHHHHHHHHHH-TTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeecCC-ChHHHHHHHHh-hhcccCcHHHHHHHHHHHHHHHHHHh
Confidence 88999999985 78777753110 01246889999999999999999999
No 365
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.06 E-value=1.4e-10 Score=114.75 Aligned_cols=81 Identities=15% Similarity=0.230 Sum_probs=64.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce---------------------------------eEEEeccccCCCceEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------~g~~~~~~~~~~~~~~ 437 (549)
...++|...+.||+|+||.||+|+... +.. .+++... .....+
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~~ 109 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDP---VSRTPA 109 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCCEE
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccC---CCCceE
Confidence 456789999999999999999998643 322 3444331 145679
Q ss_pred EEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||+++|+|.++++ .+++.....++.|+++||+|||
T Consensus 110 lv~e~~~~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH 147 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCH 147 (330)
T ss_dssp EEEECCCCCCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCchhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999885 3778889999999999999999
No 366
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.05 E-value=1.1e-10 Score=118.37 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=67.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-----------------------------------------eEEEecccc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------------AGYSEGTDF 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------------~g~~~~~~~ 430 (549)
...++|...+.||+|+||.||+|+...... .+++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--- 127 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF--- 127 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE---
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc---
Confidence 456789999999999999999998753321 344444
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||
T Consensus 128 --~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 128 --RNHLCLVFEMLS-YNLYDLLRNTN----FRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp --TTEEEEEEECCC-CBHHHHHHHTT----TSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred --CCceEEEEecCC-CCHHHHHhhcC----cCCCCHHHHHHHHHHHHHHHHHhc
Confidence 678899999996 59999998653 245899999999999999999998
No 367
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.05 E-value=1.6e-10 Score=115.42 Aligned_cols=81 Identities=20% Similarity=0.276 Sum_probs=62.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------------eEEEeccccC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------------AGYSEGTDFK 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------------~g~~~~~~~~ 431 (549)
..+.|...+.||+|+||.||+|+... +.. ++++..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH---- 83 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----
Confidence 45678889999999999999998753 221 344444
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++ +|.+++.... ..+++..+..++.|+++||+|||
T Consensus 84 -~~~~~lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH 129 (346)
T 1ua2_A 84 -KSNISLVFDFMET-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLH 129 (346)
T ss_dssp -TTCCEEEEECCSE-EHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHH
T ss_pred -CCceEEEEEcCCC-CHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHH
Confidence 6678999999996 8888887543 46889999999999999999999
No 368
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.03 E-value=5.3e-09 Score=106.21 Aligned_cols=245 Identities=10% Similarity=-0.005 Sum_probs=139.6
Q ss_pred ecC-ccccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccc---------
Q 039925 48 CLT-PHVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETH--------- 117 (549)
Q Consensus 48 ~lp-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~--------- 117 (549)
.|. .+|.++++|+.+.|.. .++..-..+|.++++|+.++|..+ ++..-...|..+.+| +.+.+..+-
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L-~~i~~p~~l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYAL-KSILLPLMLKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC-CCCCCCTTCCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccc-hhhcccCceeeecceeee
Confidence 454 4788999999999975 477444568999999999999765 553334567777777 666554331
Q ss_pred ------------cccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeC
Q 039925 118 ------------LSGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFL 184 (549)
Q Consensus 118 ------------l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l 184 (549)
+......+|.++++|+.+.+..+... .-...|.++.+|+.+.+..+ +.......|.+.. |+.+.+
T Consensus 138 ~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 138 GCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF 215 (394)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC
T ss_pred cccccccccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeec
Confidence 11112345677778888887655433 55566777778888777665 3434445566666 666665
Q ss_pred CCCcCcccCchhhhhcCCCCcEeeecccccccc--cc-----------------------cCcccccEEEcccccccccc
Q 039925 185 PENSFTGNLPLEIGVTLPKGRNYYILLLAQKLY--WS-----------------------DVSTTATIIAMGGNQISGTI 239 (549)
Q Consensus 185 ~~n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~--~l-----------------------~~~~~L~~L~l~~n~l~~~~ 239 (549)
..+... +....+ ...+|+.+.+......+. .+ .....++.+....+.+ .
T Consensus 216 ~~~~~~--i~~~~~-~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~ 289 (394)
T 4fs7_A 216 PNSLYY--LGDFAL-SKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---P 289 (394)
T ss_dssp CTTCCE--ECTTTT-TTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---C
T ss_pred CCCceE--eehhhc-ccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---c
Confidence 544322 111112 233444444433111110 00 1112233333222211 1
Q ss_pred ChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCC
Q 039925 240 TLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRN 311 (549)
Q Consensus 240 ~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 311 (549)
...|..+ .+|+.+.+..+ ++ .++ ...|.++.+|+.++|..+ ++..-..+|.++.+|+.+++..|
T Consensus 290 ~~~F~~~--~~L~~i~l~~~-i~-~I~---~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 290 EKTFYGC--SSLTEVKLLDS-VK-FIG---EEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTTTC--TTCCEEEECTT-CC-EEC---TTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred ccccccc--ccccccccccc-cc-eec---hhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 2345556 67777777654 33 232 356777778888877644 55344567777788888777655
No 369
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.03 E-value=8.9e-11 Score=118.40 Aligned_cols=45 Identities=9% Similarity=-0.106 Sum_probs=37.3
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhh------HHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRK------LSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~------~~ia~~va~gl~yLH 484 (549)
...++|||||+ |+|.++++... ..+.+..+ ..++.|+++||+|||
T Consensus 161 ~~~~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 161 ANYLLLMPAAS-VDLELLFSTLD-----FVYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp EEEEEEECCCS-EEHHHHHHHHH-----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEecCCC-CCHHHHHHHhc-----cccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 34799999999 99999998643 23566666 788999999999999
No 370
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.02 E-value=6e-10 Score=121.53 Aligned_cols=84 Identities=21% Similarity=0.382 Sum_probs=63.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC--Cce------------------------------------eEEEeccccCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE--KWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
..+.|...+.||+|+||.||+|.... +.. ++++...+..+..
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 45789999999999999999998752 322 4555542211222
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.. .++|.+++.++.||++||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH 199 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLH 199 (681)
T ss_dssp EEEEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHH
Confidence 36999999999999988753 4899999999999999999999
No 371
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.02 E-value=1.2e-10 Score=117.96 Aligned_cols=90 Identities=19% Similarity=0.189 Sum_probs=62.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------eEEEecccc---------
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------AGYSEGTDF--------- 430 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------~g~~~~~~~--------- 430 (549)
...+.|...+.||+|+||.||+|+... +.. ++++.....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 356788999999999999999998743 322 344432110
Q ss_pred ------------------------CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 ------------------------KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ------------------------~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
......++||||++ |+|.+.++... .....+++.....++.|+++||+|||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI--RSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12345789999999 58887776321 01346899999999999999999999
No 372
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.01 E-value=1.7e-10 Score=113.60 Aligned_cols=85 Identities=13% Similarity=0.191 Sum_probs=59.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-----------------------------------eEEEeccc------
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-----------------------------------AGYSEGTD------ 429 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-----------------------------------~g~~~~~~------ 429 (549)
...+.|...+.||+|+||.||+|+... +.. ++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 345678888999999999999999864 221 34432110
Q ss_pred ---cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 ---FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ---~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.......++||||++ |+|.+++... .+++.....++.|+++||+|||
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH 137 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIH 137 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHH
Confidence 012467899999998 6999998743 4888999999999999999999
No 373
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.00 E-value=2.9e-10 Score=113.64 Aligned_cols=82 Identities=11% Similarity=0.248 Sum_probs=64.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-C-c-e---------------------------------------eEEEecccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-K-W-T---------------------------------------AGYSEGTDF 430 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~-~-~---------------------------------------~g~~~~~~~ 430 (549)
..++|...+.||+|+||.||+|.... + . + .+++..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~--- 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF--- 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE---
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee---
Confidence 45678888999999999999998743 2 1 2 233444
Q ss_pred CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 ~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+ +|++.+++.... ...+++..+..++.|+++||+|||
T Consensus 94 --~~~~~lv~e~~-~~~l~~~l~~~~----~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 94 --HGHMCIAFELL-GKNTFEFLKENN----FQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp --TTEEEEEEECC-CCBHHHHHHHTT----TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEecc-CCChHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56889999999 677777776543 246899999999999999999999
No 374
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.00 E-value=1e-10 Score=115.09 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=57.2
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|.... +.. ++++.. .
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-----~ 96 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-----N 96 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-----C
Confidence 345678888999999999999999853 322 566666 6
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||+ ++.+..+.... ...+++..+..++.|+++||+|||
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH 141 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRM-----QGPIPERILGKMTVAIVKALYYLK 141 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHH-----TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecc-CCcHHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999 34444443322 246889999999999999999999
No 375
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.00 E-value=3.5e-10 Score=113.71 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=65.8
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce-------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------~g~~~~~~~~~~~ 434 (549)
...+.|...+.||+|+||.||+|....... ++++.........
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 445678899999999999999998753322 3444432222234
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++ |+|.++++.. .+++..+..++.|+++||+|||
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH 145 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIH 145 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccC-cCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 6899999998 5999998753 4899999999999999999999
No 376
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.98 E-value=2.7e-10 Score=113.90 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=66.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccccCCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTDFKGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~~~~~~ 434 (549)
...++|...+.||+|+||.||+|+... +.. ++++....+....
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 456789999999999999999999763 322 3444332222236
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++ |+|.+++... .+++..+..++.|+++||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH 129 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLH 129 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeccC-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999998 6899988753 4889999999999999999999
No 377
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.96 E-value=2.1e-10 Score=115.65 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=63.5
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEecccc-C
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDF-K 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~-~ 431 (549)
|...+.|...+.||+|+||.||+|.... +.. ++++..... .
T Consensus 38 ~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 117 (371)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred ecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence 4667789999999999999999998753 222 344543110 0
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||++ |+|.+++. ..+++..+..++.|+++||+|||
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH 161 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIMG--------MEFSEEKIQYLVYQMLKGLKYIH 161 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHTT--------SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cceeEEEEEcccc-ccHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 0112399999998 68888764 24889999999999999999999
No 378
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.96 E-value=9e-10 Score=111.01 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=62.3
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~~~ 433 (549)
..++|...+.||+|+||.||+|.... +.. ++++.... ....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 45678889999999999999998643 221 34444311 0112
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||+++ +|.+++.. .+++.....++.|+++||+|||
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH 144 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLH 144 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEcCCC-CHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHH
Confidence 367999999984 78888752 3788899999999999999999
No 379
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.96 E-value=2.5e-10 Score=114.87 Aligned_cols=85 Identities=14% Similarity=0.217 Sum_probs=59.1
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FKG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~~ 432 (549)
...+.|...+.||+|+||.||+|.... +.. ++++.... ...
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 566788899999999999999998743 322 34443310 001
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+ +++|.++++.. .+++.....++.|+++||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH 145 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIH 145 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 13469999999 88999998753 4889999999999999999999
No 380
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.96 E-value=3.6e-10 Score=113.84 Aligned_cols=85 Identities=11% Similarity=0.120 Sum_probs=64.2
Q ss_pred cccCcCCCccccCceecEEEEEeCC-Cce---------------------------------------------eEEEec
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGE-KWT---------------------------------------------AGYSEG 427 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~---------------------------------------------~g~~~~ 427 (549)
.++|...+.||+|+||.||+|+... +.. ++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4578888999999999999999643 221 122222
Q ss_pred cccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 428 TDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 428 ~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.. ......++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||
T Consensus 98 ~~-~~~~~~~lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH 148 (373)
T 1q8y_A 98 KG-PNGVHVVMVFEVL-GENLLALIKKYE----HRGIPLIYVKQISKQLLLGLDYMH 148 (373)
T ss_dssp EE-TTEEEEEEEECCC-CEEHHHHHHHTT----TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCCceEEEEEecC-CCCHHHHHHHhh----ccCCcHHHHHHHHHHHHHHHHHHH
Confidence 00 0123689999999 999999998643 245889999999999999999999
No 381
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=3.1e-10 Score=113.18 Aligned_cols=86 Identities=12% Similarity=0.172 Sum_probs=45.8
Q ss_pred ccccEEEccccccccccChhhh---hccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccC
Q 039925 223 TTATIIAMGGNQISGTITLGIK---KLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGY 299 (549)
Q Consensus 223 ~~L~~L~l~~n~l~~~~~~~~~---~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 299 (549)
++|+.|+|.+|.+.+..+..+. .+ ++|+.|+|+.|.+.+..+..++..+..+++|+.|+|++|.++...-..+..
T Consensus 252 p~Lr~L~L~~~~i~~~~~~~la~a~~~--~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 252 PNLKWLGIVDAEEQNVVVEMFLESDIL--PQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TTCCEEEEESCTTHHHHHHHHHHCSSG--GGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCcCEEeCCCCCCchHHHHHHHhCccC--CCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 3566666666666543333332 23 667777777776664322222333445667777777777666433333332
Q ss_pred -CCCCCEEEccCCc
Q 039925 300 -YQNLMELSVSRNK 312 (549)
Q Consensus 300 -l~~L~~L~Ls~N~ 312 (549)
+ ...+++++|.
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3456666655
No 382
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.95 E-value=1.4e-09 Score=108.71 Aligned_cols=86 Identities=15% Similarity=0.215 Sum_probs=63.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEecccc---C
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDF---K 431 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~---~ 431 (549)
..++|...+.||+|+||.||+|+... +.. ++++..... .
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 44678888999999999999999743 322 344443110 0
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++||||+++ ++.+.+.... ..+++..+..++.|+++||+|||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH 141 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLYYIH 141 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeccCC-CHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 13467999999985 7777776543 45899999999999999999999
No 383
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.94 E-value=4.2e-10 Score=120.23 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=64.5
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce------------------------------------eEEEeccc-cCCCc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT------------------------------------AGYSEGTD-FKGID 434 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~------------------------------------~g~~~~~~-~~~~~ 434 (549)
..++|...+.||+|+||.||+|.... +.. ++++.... ....+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 44789999999999999999998643 221 22222111 11245
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++|+|.+++.... ....+++..+..++.++++||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~---~~~~lse~~i~~I~~QLl~aL~yLH 138 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFE---NCCGLKEGPIRTLLSDISSALRYLH 138 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSS---CTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCHHHHHHhcc---cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999998654 2346889999999999999999999
No 384
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.94 E-value=5.3e-10 Score=111.87 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=62.7
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEecccc-CC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDF-KG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~-~~ 432 (549)
...++|...+.||+|+||.||+|+... +.. ++++..... ..
T Consensus 21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 456788899999999999999998753 222 344443100 00
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||++ |+|.+++.. .+++..+..++.|+++||+|||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH 143 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIH 143 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHH
Confidence 123599999998 688888752 4889999999999999999999
No 385
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.94 E-value=1.9e-09 Score=111.96 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=60.6
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccccCC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTDFKG 432 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~~~~ 432 (549)
+...++|...+.||+|+||.||+|+... +.. ++++.......
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 128 (458)
T 3rp9_A 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK 128 (458)
T ss_dssp CCSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred CccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc
Confidence 4667889999999999999999998653 222 34443322222
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+. |+|.++++.. ..+++.....++.||++||+|||
T Consensus 129 ~~~~~lv~e~~~-~~L~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH 173 (458)
T 3rp9_A 129 FDELYVVLEIAD-SDFKKLFRTP------VYLTELHIKTLLYNLLVGVKYVH 173 (458)
T ss_dssp CCCEEEEECCCS-EEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccc-cchhhhcccC------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999975 7999998754 36899999999999999999999
No 386
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.94 E-value=4.2e-10 Score=115.72 Aligned_cols=82 Identities=13% Similarity=0.301 Sum_probs=62.3
Q ss_pred cccccCcCCCccccCceecE-EEEEeCCCce--------------------------------eEEEeccccCCCceEEE
Q 039925 392 TVTNEFSSSNMIGQGSFGSV-YKGILGEKWT--------------------------------AGYSEGTDFKGIDFKAV 438 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~V-y~~~~~~~~~--------------------------------~g~~~~~~~~~~~~~~l 438 (549)
....+|...++||+|+||.| |++...+..+ ++++.. ....++
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-----~~~~~l 95 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKD-----RQFQYI 95 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEE-----TTEEEE
T ss_pred EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCEEEE
Confidence 35567888999999999985 4554444333 455555 678899
Q ss_pred EEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 439 VFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 439 v~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||||++ |+|.+++.... ....+.....++.|+++||+|||
T Consensus 96 v~E~~~-g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH 135 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD-----FAHLGLEPITLLQQTTSGLAHLH 135 (432)
T ss_dssp EEECCS-EEHHHHHHSSS-----CCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEECCC-CCHHHHHHhcC-----CCccchhHHHHHHHHHHHHHHHH
Confidence 999997 69999998654 23455567789999999999999
No 387
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.93 E-value=4.3e-10 Score=114.33 Aligned_cols=89 Identities=17% Similarity=0.266 Sum_probs=62.6
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-------------------------------eEEEecccc-CCCceEEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------AGYSEGTDF-KGIDFKAVVF 440 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------~g~~~~~~~-~~~~~~~lv~ 440 (549)
....|...+.||+|+||.||+|+...+.. ++++..... ......++||
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 34568889999999999999999854432 344433111 1133478999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||++++.+....+... ....+++.....++.|+++||+|||
T Consensus 118 e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH 158 (394)
T 4e7w_A 118 EYVPETVYRASRHYAK---LKQTMPMLLIKLYMYQLLRSLAYIH 158 (394)
T ss_dssp ECCSEEHHHHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccCccHHHHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999765443332111 1246889999999999999999999
No 388
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.93 E-value=1.5e-09 Score=110.32 Aligned_cols=86 Identities=16% Similarity=0.188 Sum_probs=63.0
Q ss_pred ccccCcCCCccccCceecEEEEEeCCCce-------------------------------------------eEEEeccc
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGEKWT-------------------------------------------AGYSEGTD 429 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~-------------------------------------------~g~~~~~~ 429 (549)
..+.|...+.||+|+||.||+|+...... ++++...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~- 113 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS- 113 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE-
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec-
Confidence 34678888999999999999998754322 2222210
Q ss_pred cCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 430 FKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 430 ~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.......++||||+ +|++.+++.... ...+++..+..++.|+++||+|||
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH 163 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSN----YQGLPLPCVKKIIQQVLQGLDYLH 163 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTT----TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00145789999999 666766665432 246899999999999999999999
No 389
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.92 E-value=3.8e-10 Score=113.52 Aligned_cols=86 Identities=13% Similarity=0.159 Sum_probs=57.8
Q ss_pred ccccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------------eEEEeccc-cC
Q 039925 391 STVTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------------AGYSEGTD-FK 431 (549)
Q Consensus 391 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------------~g~~~~~~-~~ 431 (549)
|...+.|...+.||+|+||.||+|.... +.. ++++.... ..
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 25 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EEEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred cCCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 4667889999999999999999998643 221 34443210 01
Q ss_pred CCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.....++|+||+ +++|.++++.. .+++..+..++.|+++||+|||
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH 149 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIH 149 (367)
T ss_dssp GCCCCEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 124579999998 78999998753 4899999999999999999999
No 390
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.91 E-value=1.4e-09 Score=112.76 Aligned_cols=84 Identities=17% Similarity=0.095 Sum_probs=62.0
Q ss_pred cccccCcCCCccccCceecEEEEEeCCC-ce-------------------------------------eEEEecccc-CC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEK-WT-------------------------------------AGYSEGTDF-KG 432 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~-------------------------------------~g~~~~~~~-~~ 432 (549)
...+.|...+.||+|+||.||+|..... .. ++++..... ..
T Consensus 59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 4567888899999999999999986532 21 344433110 11
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++|||||+++ +.+.+.. .+++.++..++.|+++||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH 181 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM--------ELDHERMSYLLYQMLCGIKHLH 181 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCC-HHHHHhh--------cCCHHHHHHHHHHHHHHHHHHH
Confidence 24679999999865 5555542 3788999999999999999999
No 391
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.91 E-value=8e-10 Score=110.79 Aligned_cols=90 Identities=19% Similarity=0.202 Sum_probs=52.9
Q ss_pred cccccCcCCCccccCceecEEEEEeCC-Cce----------------------------------eEEEecccc--CCCc
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGE-KWT----------------------------------AGYSEGTDF--KGID 434 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~----------------------------------~g~~~~~~~--~~~~ 434 (549)
...++|...+.||+|+||.||+|+... +.. ++++..... ....
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 466789999999999999999999753 322 455543211 1122
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++++ +...+.... .....+++.....++.|++.|+.|||
T Consensus 100 ~~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 100 YLNVVMEYVPDT-LHRCCRNYY--RRQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp EEEEEEECCSCB-HHHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEeeccccc-HHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 378999999964 444333211 01246788889999999999999999
No 392
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.90 E-value=3.7e-10 Score=114.59 Aligned_cols=81 Identities=22% Similarity=0.309 Sum_probs=57.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce--------------------------------------eEEEeccccCCC
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
..++|...+.||+|+||.||+|.... +.. ++++... ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---ND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---TS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---CC
Confidence 34678888999999999999998643 222 3444431 13
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++|||||+ |+|.++++.. .+++..+..++.|+++||+|||
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccC-cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999998 6899998753 4889999999999999999999
No 393
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.89 E-value=3.8e-09 Score=108.65 Aligned_cols=86 Identities=15% Similarity=0.180 Sum_probs=67.5
Q ss_pred cccccCcCCCccccCceecEEEEEeCCCce--------------------------------------eEEEeccccCCC
Q 039925 392 TVTNEFSSSNMIGQGSFGSVYKGILGEKWT--------------------------------------AGYSEGTDFKGI 433 (549)
Q Consensus 392 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~--------------------------------------~g~~~~~~~~~~ 433 (549)
...++|...+.||+|+||.||+|+...... ++++........
T Consensus 23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 567789999999999999999998754322 344433211122
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...++||||++ |+|.++++.. ..+++.....++.|+++||.|||
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~------~~l~~~~~~~i~~qil~aL~~LH 146 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP------IFLTEEHIKTILYNLLLGENFIH 146 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCC-cCHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 56899999987 5999999754 36899999999999999999999
No 394
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=7.3e-10 Score=110.50 Aligned_cols=85 Identities=14% Similarity=0.129 Sum_probs=42.2
Q ss_pred CccccCCCCCCEEEccCCcce---------ecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccc
Q 039925 50 TPHVGNFGYLRFINLVDNNFR---------GEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSG 120 (549)
Q Consensus 50 p~~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~ 120 (549)
.+++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-. .++. + .+++| ++|+|..|.+..
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L-~~L~L~~~~l~~ 207 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNL-KSLEIISGGLPD 207 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTC-SEEEEECSBCCH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCC-cEEEEecCCCCh
Confidence 344556777888877554221 112333445566666666665211 1222 2 25555 666666555543
Q ss_pred ccccccC--CCCCCCEEEee
Q 039925 121 QLLDFIG--NPSAIQVMIFK 138 (549)
Q Consensus 121 ~~~~~~~--~l~~L~~L~L~ 138 (549)
.....+. .+++|++|+|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHHHHHccCCCCcEEEEe
Confidence 3222222 45556666554
No 395
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.87 E-value=2.3e-09 Score=109.38 Aligned_cols=86 Identities=21% Similarity=0.216 Sum_probs=54.8
Q ss_pred ccCcC-CCccccCceecEEEEEeCCC---c-e--------------------------------eEEEeccccCCCceEE
Q 039925 395 NEFSS-SNMIGQGSFGSVYKGILGEK---W-T--------------------------------AGYSEGTDFKGIDFKA 437 (549)
Q Consensus 395 ~~~~~-~~~lG~G~~g~Vy~~~~~~~---~-~--------------------------------~g~~~~~~~~~~~~~~ 437 (549)
+.|.. +++||+|+||.||+|++.+. . + ++++... .....+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CCCeEE
Confidence 34544 56899999999999997632 1 1 3455321 156789
Q ss_pred EEEeecCCCCcccccccCC---CCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 438 VVFDYMQNRSLEDWPYQSN---NKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 438 lv~ey~~~GsL~~~l~~~~---~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+||||++ |+|.+++.... .......+++..+..++.|++.||+|||
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 145 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999987 58888775322 0011235899999999999999999999
No 396
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.80 E-value=4e-09 Score=108.57 Aligned_cols=82 Identities=17% Similarity=0.089 Sum_probs=55.7
Q ss_pred CcCCCccccCceecEEEEEeCCCce---------------------------------eEEEeccccCCCceEEEEEeec
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKWT---------------------------------AGYSEGTDFKGIDFKAVVFDYM 443 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~~---------------------------------~g~~~~~~~~~~~~~~lv~ey~ 443 (549)
|...++||+|+||+||.+...++.. ++++.. ....++||||+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-----~~~~~lv~E~~ 91 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT-----DRFLYIALELC 91 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEEEECCC
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCeEEEEEecC
Confidence 3456789999999997655444432 455555 67889999999
Q ss_pred CCCCcccccccCCCCCCC-CCCchhhhHHHHHHHHHHHHHhh
Q 039925 444 QNRSLEDWPYQSNNKLKP-SSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 444 ~~GsL~~~l~~~~~~~~~-~~l~~~~~~~ia~~va~gl~yLH 484 (549)
. |+|.+++......... ...++...+.++.||++||+|||
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 132 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 6 6999999865410000 11244456789999999999999
No 397
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.79 E-value=3.3e-09 Score=108.72 Aligned_cols=89 Identities=18% Similarity=0.279 Sum_probs=62.1
Q ss_pred ccccCcCCCccccCceecEEEEEeCC-Cce-------------------------------eEEEecccc-CCCceEEEE
Q 039925 393 VTNEFSSSNMIGQGSFGSVYKGILGE-KWT-------------------------------AGYSEGTDF-KGIDFKAVV 439 (549)
Q Consensus 393 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~-------------------------------~g~~~~~~~-~~~~~~~lv 439 (549)
....|...+.||+|+||.||+|+... +.. ++++..... ......++|
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 34468888999999999999999853 332 344432110 112346799
Q ss_pred EeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 440 FDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 440 ~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
|||+++ ++.+.+.... .....+++.....++.|+++||+|||
T Consensus 132 ~e~~~~-~l~~~~~~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYS--RAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp EECCCE-EHHHHHHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccc-cHHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999996 5666554211 01246899999999999999999999
No 398
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.75 E-value=4.3e-07 Score=92.06 Aligned_cols=109 Identities=13% Similarity=0.098 Sum_probs=73.2
Q ss_pred cccCCC-CCCEEEccCCcceecCCccccCCCCCCEeeccccc---ccccCCcccccccCccceeeecccccccccccccC
Q 039925 52 HVGNFG-YLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNH---FSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 52 ~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~---l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
+|.+++ .|+.+.+..+ ++..-..+|.++++|+.+.+..|. ++..-..+|..+.+| +.+.+..+ ++......|.
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L-~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSEL-TDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTC-CBCGGGTT-CSEECTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccc-eeeccCCc-cceehhhhhh
Confidence 677774 5888888754 664556688888999998887764 553334567777777 77766544 4445556777
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccC
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRN 164 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 164 (549)
.+.+|+.+.+..+. .......|..+.+|+.+.+..+
T Consensus 135 ~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~ 170 (394)
T 4gt6_A 135 HCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS 170 (394)
T ss_dssp TCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT
T ss_pred hhccccccccccee-eeecccceecccccccccccce
Confidence 78888888876543 3245556677777777776544
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.75 E-value=1.7e-07 Score=95.12 Aligned_cols=80 Identities=11% Similarity=0.082 Sum_probs=50.8
Q ss_pred ccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCC
Q 039925 223 TTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQN 302 (549)
Q Consensus 223 ~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 302 (549)
.+|+.+.+..+ +......+|.++ .+|+.++|..+ ++ .++ ..+|.++.+|+.+++..+ ++..-..+|.++++
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c--~~L~~i~lp~~-v~-~I~---~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESC--TSLVSIDLPYL-VE-EIG---KRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTC--TTCCEECCCTT-CC-EEC---TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccc-cceechhhhcCC--CCCCEEEeCCc-cc-EEh---HHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 35555655443 443444567777 77888877644 43 232 356777888888888766 55445567778888
Q ss_pred CCEEEccCC
Q 039925 303 LMELSVSRN 311 (549)
Q Consensus 303 L~~L~Ls~N 311 (549)
|+.+++..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 888877644
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.71 E-value=6.3e-10 Score=105.34 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=67.4
Q ss_pred ccCCCCCCE--eeccccccc---ccCCcccccccCccceeeeccccccc--ccccccCCCCCCCEEEeecceeeeeCCcc
Q 039925 77 VGRLFRLEY--LLLANNHFS---GKIPANLSHCSNLLTKLFICETHLSG--QLLDFIGNPSAIQVMIFKENSLEGKFPNT 149 (549)
Q Consensus 77 ~~~l~~L~~--L~Ls~n~l~---~~~p~~l~~l~~L~~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 149 (549)
|...+.|+. ++++.|... ..++....++++| +.|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L-~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPEL-LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTC-CEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCC-CEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 344444554 666666433 1122222457778 888888888876 3456667788888888888888743 33
Q ss_pred ccCCC--CCCEEecccCcceecccc-------cccccc-cceee
Q 039925 150 LSNLR--SLFYDNINRNEFSGLIPS-------FIFNIS-LKWNF 183 (549)
Q Consensus 150 ~~~l~--~L~~L~L~~n~l~~~~p~-------~~~~l~-L~~L~ 183 (549)
+..+. +|++|+|++|.+.+.+|. .+..++ |+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44444 888888888888765552 345566 77775
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.68 E-value=7.9e-07 Score=90.08 Aligned_cols=248 Identities=9% Similarity=0.017 Sum_probs=153.3
Q ss_pred ccccCCCCCCEEEccCCc---ceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccC
Q 039925 51 PHVGNFGYLRFINLVDNN---FRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIG 127 (549)
Q Consensus 51 ~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~ 127 (549)
.+|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++..-...|..+.+| +.+.+..+ +.......|.
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L-~~i~lp~~-~~~I~~~~F~ 157 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEEL-DTVTIPEG-VTSVADGMFS 157 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTC-CEEECCTT-CCEECTTTTT
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccc-ccccccce-eeeeccccee
Confidence 478999999999998764 55344568888999999888765 443444567888888 88888644 3435556777
Q ss_pred CCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCC--------------------
Q 039925 128 NPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPE-------------------- 186 (549)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~-------------------- 186 (549)
.+.+|+.+.+..+ ++..-...|. ..+|+.+.+..+-.. .....|.+.. +.......
T Consensus 158 ~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (394)
T 4gt6_A 158 YCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYA 234 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEE
T ss_pred cccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccccccceeeccccccccc
Confidence 8888888888654 3323333343 345666665433211 1112222222 22111110
Q ss_pred ----------------CcCcccCchhhhhcCCCCcEeeecccccccc--cccCcccccEEEccccccccccChhhhhccc
Q 039925 187 ----------------NSFTGNLPLEIGVTLPKGRNYYILLLAQKLY--WSDVSTTATIIAMGGNQISGTITLGIKKLIF 248 (549)
Q Consensus 187 ----------------n~l~~~~p~~~~~~l~~L~~L~l~~~~~~l~--~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 248 (549)
+.+. .+....+..+.+|+.+.+......+. .+.....|+.+.+. +.+.......|.++
T Consensus 235 ~~~~~~~~~~~~~~ip~~v~-~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c-- 310 (394)
T 4gt6_A 235 LIRYPSQREDPAFKIPNGVA-RIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGC-- 310 (394)
T ss_dssp EEECCTTCCCSEEECCTTEE-EECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTC--
T ss_pred ccccccccccceEEcCCcce-EcccceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCC--
Confidence 1111 12222333677788887766433322 12233578888875 44554555678888
Q ss_pred cCccEEEcCCCcccccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccc
Q 039925 249 VNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 249 ~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
.+|+.+.|..+ ++ .+. ...|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.+|...
T Consensus 311 ~~L~~i~lp~~-v~-~I~---~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 311 ISLKSIDIPEG-IT-QIL---DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TTCCEEECCTT-CC-EEC---TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCcCEEEeCCc-cc-Eeh---HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 89999999765 43 232 467888999999999654 55344568899999999999887643
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.59 E-value=4.8e-09 Score=94.39 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=59.9
Q ss_pred ccccCCCCCCEEEccCC-cceec----CCccccCCCCCCEeeccccccccc----CCcccccccCccceeeecccccccc
Q 039925 51 PHVGNFGYLRFINLVDN-NFRGE----IPEKVGRLFRLEYLLLANNHFSGK----IPANLSHCSNLLTKLFICETHLSGQ 121 (549)
Q Consensus 51 ~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~~L~Ls~n~l~~~ 121 (549)
..+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...+.| ++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L-~~L~L~~N~i~~~ 108 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTL-KSLNVESNFISGS 108 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSC-CEEECCSSCCCHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCc-CEEECcCCcCCHH
Confidence 34556677777777777 66532 344455566777777777776531 22333444555 6666666665532
Q ss_pred ----cccccCCCCCCCEEEe--ecceeeee----CCccccCCCCCCEEecccCcc
Q 039925 122 ----LLDFIGNPSAIQVMIF--KENSLEGK----FPNTLSNLRSLFYDNINRNEF 166 (549)
Q Consensus 122 ----~~~~~~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l 166 (549)
+...+...++|++|+| ++|.+... +...+...++|++|+|++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2333444445555555 44554421 122233334444444444443
No 403
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.51 E-value=3.8e-08 Score=100.50 Aligned_cols=48 Identities=15% Similarity=0.150 Sum_probs=34.0
Q ss_pred EEEEEeecCCCCcccccccCCC-CCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQNRSLEDWPYQSNN-KLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~GsL~~~l~~~~~-~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+++|++ .+|+|.+++..... ......++|..++.++.|+++||+|||
T Consensus 180 ~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 228 (413)
T 3dzo_A 180 RFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 228 (413)
T ss_dssp EEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3455554 56899988841100 001346889999999999999999999
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=3.1e-08 Score=89.08 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=49.7
Q ss_pred cccEEEccccccccc----cChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeec--cCcccccc----C
Q 039925 224 TATIIAMGGNQISGT----ITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLAL--DNNKLQGN----L 293 (549)
Q Consensus 224 ~L~~L~l~~n~l~~~----~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~L--s~N~l~~~----~ 293 (549)
+|++|+|++|.+... +...+... ++|++|+|++|.+.+.....+...+...++|++|+| ++|.+... +
T Consensus 66 ~L~~L~Ls~n~i~~~g~~~l~~~L~~n--~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l 143 (185)
T 1io0_A 66 YVKKFSIVGTRSNDPVAFALAEMLKVN--NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 143 (185)
T ss_dssp SCCEEECTTSCCCHHHHHHHHHHHHHC--SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CcCEEECcCCCCChHHHHHHHHHHHhC--CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH
Confidence 444455555544432 12233334 566666666666654322223445556667777777 66777643 3
Q ss_pred CccccCCCCCCEEEccCCccc
Q 039925 294 PSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
...+...+.|+.|+|++|.+.
T Consensus 144 ~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 144 ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeccCCCCC
Confidence 344555677777777777765
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.37 E-value=3.6e-05 Score=77.31 Aligned_cols=245 Identities=9% Similarity=-0.032 Sum_probs=111.8
Q ss_pred ecCc-cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeeccccccccccccc
Q 039925 48 CLTP-HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFI 126 (549)
Q Consensus 48 ~lp~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~ 126 (549)
.|++ +|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++ .+.+..+...+| +.+.+..+ ++......|
T Consensus 59 ~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~~L-~~i~lp~~-~~~i~~~~F 132 (379)
T 4h09_A 59 SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGTDL-DDFEFPGA-TTEIGNYIF 132 (379)
T ss_dssp EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTCCC-SEEECCTT-CCEECTTTT
T ss_pred ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccCCc-ccccCCCc-ccccccccc
Confidence 4433 6778888888888644 553344466665 5666666543 44 333333333466 77777654 222333344
Q ss_pred CCCCCCCEEEeecceeeeeCCccccCCCCCCEEecccCcceecc------------cccccccc-cceeeCCCCcCcccC
Q 039925 127 GNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNEFSGLI------------PSFIFNIS-LKWNFLPENSFTGNL 193 (549)
Q Consensus 127 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~------------p~~~~~l~-L~~L~l~~n~l~~~~ 193 (549)
.+. +|+.+.+..+ ++..-...|..+.+++.+.+..+...... ...+.... +..+.+..... .+
T Consensus 133 ~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i 208 (379)
T 4h09_A 133 YNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK--TV 208 (379)
T ss_dssp TTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC--EE
T ss_pred ccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccccccccee--EE
Confidence 443 4555554433 33244455666677776666543221100 01111111 22222222111 11
Q ss_pred chhhhhcCCCCcEeeecccccccc--cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCcc
Q 039925 194 PLEIGVTLPKGRNYYILLLAQKLY--WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIAS 271 (549)
Q Consensus 194 p~~~~~~l~~L~~L~l~~~~~~l~--~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~ 271 (549)
....+....+|+.+.+...+..+. .+.....|+.+.+..+ ++......|..+ .+|+.+.+..+ ++ .++ ..
T Consensus 209 ~~~~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~--~~l~~i~l~~~-i~-~i~---~~ 280 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNC--TALKTLNFYAK-VK-TVP---YL 280 (379)
T ss_dssp CTTTTTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTC--TTCCEEEECCC-CS-EEC---TT
T ss_pred eecccccccccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCcccccee--ehhcccccccc-ce-ecc---cc
Confidence 111111344455554443222221 1112234555555433 332333444445 55555555433 22 121 23
Q ss_pred ccCCccccCeeeccCccccccCCccccCCCCCCEEEccC
Q 039925 272 SLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSR 310 (549)
Q Consensus 272 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 310 (549)
.|.++++|+.+.+.++.++..-..+|.++.+|+.++|..
T Consensus 281 aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 281 LCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 455556666666655555533444555666666665543
No 406
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.36 E-value=3.9e-07 Score=90.16 Aligned_cols=45 Identities=9% Similarity=-0.041 Sum_probs=39.4
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
....++||||+++|++.+.+.. ..+++.....++.|+++||+|||
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp TTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999988777754 24789999999999999999999
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.28 E-value=3.1e-07 Score=86.81 Aligned_cols=107 Identities=20% Similarity=0.157 Sum_probs=78.1
Q ss_pred ccCCCCCCE--EEccCCcce---ecCCccccCCCCCCEeecccccccc--cCCcccccccCccceeeecccccccc-ccc
Q 039925 53 VGNFGYLRF--INLVDNNFR---GEIPEKVGRLFRLEYLLLANNHFSG--KIPANLSHCSNLLTKLFICETHLSGQ-LLD 124 (549)
Q Consensus 53 ~~~l~~L~~--L~L~~n~l~---~~~p~~~~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~~L~Ls~n~l~~~-~~~ 124 (549)
|...+.|.. ++++.|... ..++-...++++|+.|+|++|+|++ .+|..+..+++| +.|+|++|+|++. ...
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L-~~L~Ls~N~i~~~~~l~ 215 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNL-KILNLSGNELKSERELD 215 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTC-CEEECTTSCCCSGGGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCC-CEEECCCCccCCchhhh
Confidence 344445555 677777543 2222223568999999999999996 455777899999 9999999999865 112
Q ss_pred ccCCCCCCCEEEeecceeeeeCCc-------cccCCCCCCEEec
Q 039925 125 FIGNPSAIQVMIFKENSLEGKFPN-------TLSNLRSLFYDNI 161 (549)
Q Consensus 125 ~~~~l~~L~~L~L~~n~l~~~~p~-------~~~~l~~L~~L~L 161 (549)
.+..+ +|++|+|++|.+.+.+|. .+..+++|+.||=
T Consensus 216 ~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 216 KIKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hcccC-CcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 33344 999999999999876663 4678999999873
No 408
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.11 E-value=1.4e-06 Score=91.79 Aligned_cols=67 Identities=13% Similarity=0.235 Sum_probs=47.3
Q ss_pred CCCccccCceecEEEEEeCCCce------------------------------------------eEEEeccccCCCceE
Q 039925 399 SSNMIGQGSFGSVYKGILGEKWT------------------------------------------AGYSEGTDFKGIDFK 436 (549)
Q Consensus 399 ~~~~lG~G~~g~Vy~~~~~~~~~------------------------------------------~g~~~~~~~~~~~~~ 436 (549)
..+.||+|+||.||+|.+.+..+ ..++.. .+..
T Consensus 340 ~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-----~~~~ 414 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-----LDNK 414 (540)
T ss_dssp --------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-----TTTT
T ss_pred CCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-----CCcc
Confidence 45689999999999997655433 233333 4567
Q ss_pred EEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 437 AVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 437 ~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++||||+++|+|.++++. +..++.|+++||+|||
T Consensus 415 ~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH 448 (540)
T 3en9_A 415 RIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLH 448 (540)
T ss_dssp EEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHH
Confidence 999999999999999873 4589999999999999
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.05 E-value=1.5e-06 Score=76.30 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=17.4
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEeecccc
Q 039925 58 YLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANN 91 (549)
Q Consensus 58 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 91 (549)
+|+.||++++.|+..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555554332333445555555555555
No 410
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.96 E-value=1.9e-06 Score=75.54 Aligned_cols=92 Identities=12% Similarity=0.146 Sum_probs=52.3
Q ss_pred CCccccCCCCCCEeecccccccccCCcccccccCccceeeecccc-cccccccccCCC----CCCCEEEeecce-eeeeC
Q 039925 73 IPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETH-LSGQLLDFIGNP----SAIQVMIFKENS-LEGKF 146 (549)
Q Consensus 73 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~-l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~ 146 (549)
+|.....-.+|+.||+++|.|+..--..+..+++| ++|+|++|. +++.--..+..+ ++|++|+|++|. ++..-
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L-~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYV-EKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCC-CEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCC-CEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 34433233467788888777765444455667777 777777774 554333334443 356667766663 55332
Q ss_pred CccccCCCCCCEEecccCc
Q 039925 147 PNTLSNLRSLFYDNINRNE 165 (549)
Q Consensus 147 p~~~~~l~~L~~L~L~~n~ 165 (549)
-..+.++++|++|+|+++.
T Consensus 132 l~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHGGGCTTCCEEEEESCT
T ss_pred HHHHhcCCCCCEEECCCCC
Confidence 2344556666666666653
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.90 E-value=0.00082 Score=67.23 Aligned_cols=261 Identities=8% Similarity=-0.049 Sum_probs=150.7
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecccccccccCCcccccccCccceeeecccccccccccccCCCCC
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLANNHFSGKIPANLSHCSNLLTKLFICETHLSGQLLDFIGNPSA 131 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~~L~Ls~n~l~~~~~~~~~~l~~ 131 (549)
+|.++ +|+.+.+..+ ++..-...|.. .+|+.+.+..+-.. .-...|..+ ++ +.+.+..+ ++......|..+.+
T Consensus 87 aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~~~-i~~~~F~~~-~l-~~~~~~~~-v~~i~~~~f~~~~~ 159 (379)
T 4h09_A 87 AFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGATTE-IGNYIFYNS-SV-KRIVIPKS-VTTIKDGIGYKAEN 159 (379)
T ss_dssp TTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTCCE-ECTTTTTTC-CC-CEEEECTT-CCEECSCTTTTCTT
T ss_pred hhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcccc-ccccccccc-ee-eeeeccce-eeccccchhccccc
Confidence 56666 6778877654 55233345554 47999999765322 223334433 55 55555433 44445566777888
Q ss_pred CCEEEeecceeee------------eCCccccCCCCCCEEecccCcceecccccccccc-cceeeCCCCcCcccCchhhh
Q 039925 132 IQVMIFKENSLEG------------KFPNTLSNLRSLFYDNINRNEFSGLIPSFIFNIS-LKWNFLPENSFTGNLPLEIG 198 (549)
Q Consensus 132 L~~L~L~~n~l~~------------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-L~~L~l~~n~l~~~~p~~~~ 198 (549)
++.+.+..+.... .....+.....+..+.+..+.. ......+.... |+.+.+..+ +. .+....+
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~-~i~~~~f 236 (379)
T 4h09_A 160 LEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VT-TLGDGAF 236 (379)
T ss_dssp CCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CC-EECTTTT
T ss_pred ccccccccccceeecccceecccccceecccccccccccccccccee-EEeecccccccccceeeeccc-ee-EEccccc
Confidence 8888776543321 1112234445555555443322 13334444555 666666543 22 2333333
Q ss_pred hcCCCCcEeeecccccccc--cccCcccccEEEccccccccccChhhhhccccCccEEEcCCCcccccCCCcCccccCCc
Q 039925 199 VTLPKGRNYYILLLAQKLY--WSDVSTTATIIAMGGNQISGTITLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNL 276 (549)
Q Consensus 199 ~~l~~L~~L~l~~~~~~l~--~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l 276 (549)
....+|+.+.+...+..+. .+....+|+.+.+..+ +.......|..+ .+|+.+.+.++.++ .++ ...|.++
T Consensus 237 ~~~~~L~~i~lp~~v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c--~~L~~i~l~~~~i~-~I~---~~aF~~c 309 (379)
T 4h09_A 237 YGMKALDEIAIPKNVTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC--SNLTKVVMDNSAIE-TLE---PRVFMDC 309 (379)
T ss_dssp TTCSSCCEEEECTTCCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC--TTCCEEEECCTTCC-EEC---TTTTTTC
T ss_pred cCCccceEEEcCCCccEeCccccceeehhcccccccc-ceeccccccccc--cccccccccccccc-eeh---hhhhcCC
Confidence 3666777777665443332 1223346777777543 444445677888 89999999888776 343 4678889
Q ss_pred cccCeeeccCccccccCCccccCCCCCCEEEccCCcccccCCCCCCCCCCCcccCC
Q 039925 277 TLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLSASLPPLNSQHNHSFSCPG 332 (549)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ls~N~~~~ip~ 332 (549)
.+|+.+.|..+ ++..-..+|.++.+|+.+.+..+ ++ .|...-+.++.+..+|.
T Consensus 310 ~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~-~I~~~aF~~c~~~~~~~ 362 (379)
T 4h09_A 310 VKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT-LIESGAFEGSSITKYPT 362 (379)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTTTSSCCCCCT
T ss_pred CCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC-EEchhHhhCCCCCcCcc
Confidence 99999999755 55445668889999999888654 44 24443344454445543
No 412
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=97.82 E-value=1.7e-05 Score=76.10 Aligned_cols=78 Identities=8% Similarity=0.004 Sum_probs=53.1
Q ss_pred cccCcCCCccccCceecEEEEEeCCCceeEE-------Eec----------------------------------ccc--
Q 039925 394 TNEFSSSNMIGQGSFGSVYKGILGEKWTAGY-------SEG----------------------------------TDF-- 430 (549)
Q Consensus 394 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~g~-------~~~----------------------------------~~~-- 430 (549)
..-|...+.||+|+||.||+|.+.++..+.. ... ...
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~ 168 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK 168 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCe
Confidence 3345566899999999999999954543110 000 000
Q ss_pred -CCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 431 -KGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 431 -~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
...+..++||||+++|+|.+ +... ....++.|+++||+|||
T Consensus 169 ~~~~~~~~lvmE~~~g~~L~~-l~~~------------~~~~i~~qi~~~l~~lH 210 (282)
T 1zar_A 169 VYAWEGNAVLMELIDAKELYR-VRVE------------NPDEVLDMILEEVAKFY 210 (282)
T ss_dssp EEEEETTEEEEECCCCEEGGG-CCCS------------CHHHHHHHHHHHHHHHH
T ss_pred EEeccceEEEEEecCCCcHHH-cchh------------hHHHHHHHHHHHHHHHH
Confidence 01234589999999999999 4321 23469999999999999
No 413
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.48 E-value=7.3e-05 Score=79.19 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=40.9
Q ss_pred eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 ~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.+ ....||||||++||+|.++|...+ +++.. +|+.||++||+|+|
T Consensus 308 ~~~~ed-----~~~~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH 356 (569)
T 4azs_A 308 LAHGEN-----AQSGWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALE 356 (569)
T ss_dssp EEEEEC-----SSEEEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHH
T ss_pred EEEEEE-----CCEEEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHH
Confidence 466666 788999999999999999998654 45543 58999999999999
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.45 E-value=4.2e-05 Score=68.34 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=66.9
Q ss_pred cccccEEEcccccccccc----ChhhhhccccCccEEEcCCCcccccCCCcCccccCCccccCeeeccCc---cccc---
Q 039925 222 STTATIIAMGGNQISGTI----TLGIKKLIFVNLYALTMVKNKLSGPIPHHIASSLGNLTLLTYLALDNN---KLQG--- 291 (549)
Q Consensus 222 ~~~L~~L~l~~n~l~~~~----~~~~~~l~~~~L~~L~L~~n~l~~~~p~~l~~~l~~l~~L~~L~Ls~N---~l~~--- 291 (549)
...|+.|+|++|.+.+.. ...+..- +.|+.|+|++|.|.+.....+...+..-+.|++|+|++| .+..
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N--~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETS--PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHC--SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcC--CccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 347999999999998543 3444455 789999999999985543344556777788999999865 3442
Q ss_pred -cCCccccCCCCCCEEEccCCccc
Q 039925 292 -NLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 292 -~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
.+...+...+.|+.|+++.|.+.
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHhCCCcCeEeccCCCcc
Confidence 24456777899999999887654
No 415
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.38 E-value=4.1e-05 Score=68.41 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=30.0
Q ss_pred cCCCCCCEEEccCC-ccee----cCCccccCCCCCCEeeccccccccc----CCcccccccCccceeeecccccc
Q 039925 54 GNFGYLRFINLVDN-NFRG----EIPEKVGRLFRLEYLLLANNHFSGK----IPANLSHCSNLLTKLFICETHLS 119 (549)
Q Consensus 54 ~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~~L~Ls~n~l~ 119 (549)
.+-+.|+.|+|++| .|.. .+-+.+..-+.|+.|+|++|.|... +...+..-+.| ++|+|++|.|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL-~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSL-RVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSC-CEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCcc-CeEecCCCcCC
Confidence 33455666666653 4432 1333444445555666655555421 12223333444 44555555444
No 416
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.23 E-value=0.00017 Score=71.77 Aligned_cols=76 Identities=13% Similarity=0.075 Sum_probs=51.5
Q ss_pred CcCCCccccCceecEEEEEeCCCceeEEE-------e--------------------------------------ccccC
Q 039925 397 FSSSNMIGQGSFGSVYKGILGEKWTAGYS-------E--------------------------------------GTDFK 431 (549)
Q Consensus 397 ~~~~~~lG~G~~g~Vy~~~~~~~~~~g~~-------~--------------------------------------~~~~~ 431 (549)
|.....||+|+||.||+|...+|..++.- . ....+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67788999999999999998776541100 0 00001
Q ss_pred CCc-----eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 432 GID-----FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 432 ~~~-----~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+. ..+|||||+++++|..+.... ....++.|++.||.|||
T Consensus 177 vp~p~~~~~~~LVME~i~G~~L~~l~~~~------------~~~~l~~qll~~l~~lH 222 (397)
T 4gyi_A 177 VPEPIAQSRHTIVMSLVDALPMRQVSSVP------------DPASLYADLIALILRLA 222 (397)
T ss_dssp CCCEEEEETTEEEEECCSCEEGGGCCCCS------------CHHHHHHHHHHHHHHHH
T ss_pred CCeeeeccCceEEEEecCCccHhhhcccH------------HHHHHHHHHHHHHHHHH
Confidence 111 125999999999987764321 23467899999999999
No 417
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=96.79 E-value=0.00039 Score=65.61 Aligned_cols=44 Identities=9% Similarity=0.096 Sum_probs=29.3
Q ss_pred EEEEEeecCC-CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 436 KAVVFDYMQN-RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 436 ~~lv~ey~~~-GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.++||||+.+ |.+...+.... ...++.....++.|+++||.|||
T Consensus 143 ~~lVmE~~g~~g~~~~~L~~~~-----~~~~~~~~~~i~~qi~~~l~~lH 187 (258)
T 1zth_A 143 NVLLMEFIGEDELPAPTLVELG-----RELKELDVEGIFNDVVENVKRLY 187 (258)
T ss_dssp TEEEEECCEETTEECCBHHHHG-----GGGGGSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCccccHHHHh-----hccChHHHHHHHHHHHHHHHHHH
Confidence 3699999953 53333333211 01235567889999999999999
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.68 E-value=0.0029 Score=52.56 Aligned_cols=56 Identities=20% Similarity=0.205 Sum_probs=35.9
Q ss_pred EEEcCCCccc-ccCCCcCccccCCccccCeeeccCccccccCCccccCCCCCCEEEccCCccc
Q 039925 253 ALTMVKNKLS-GPIPHHIASSLGNLTLLTYLALDNNKLQGNLPSSLGYYQNLMELSVSRNKLS 314 (549)
Q Consensus 253 ~L~L~~n~l~-~~~p~~l~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 314 (549)
.++.+++.++ ..+|..+| ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp------~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP------VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC------TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC------cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666664 24433222 35777788888877544556777788888888777765
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.08 E-value=0.0061 Score=50.55 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=13.6
Q ss_pred CCEEEeecceeeeeCCccccCCCCCCEEecccCc
Q 039925 132 IQVMIFKENSLEGKFPNTLSNLRSLFYDNINRNE 165 (549)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 165 (549)
|++|+|++|+|+..-+..|..+++|++|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 3344444444432222333344444444444443
No 420
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=91.53 E-value=0.24 Score=46.04 Aligned_cols=73 Identities=8% Similarity=-0.052 Sum_probs=50.3
Q ss_pred cCcCCCccccCceecEEEEEeCCCce-----------------------------------eEEEeccccCCCceEEEEE
Q 039925 396 EFSSSNMIGQGSFGSVYKGILGEKWT-----------------------------------AGYSEGTDFKGIDFKAVVF 440 (549)
Q Consensus 396 ~~~~~~~lG~G~~g~Vy~~~~~~~~~-----------------------------------~g~~~~~~~~~~~~~~lv~ 440 (549)
+|.....+|.|+.+.||+....++.+ ++++.. .+..++||
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-----~~~~~lv~ 89 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-----DGWSNLLM 89 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEE
T ss_pred cceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----CCceEEEE
Confidence 45555567777788888876443322 333333 45678999
Q ss_pred eecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 441 DYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 441 ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
||++|.++.+.+.. ......++.++++++..||
T Consensus 90 e~i~G~~l~~~~~~-----------~~~~~~~~~~l~~~l~~LH 122 (263)
T 3tm0_A 90 SEADGVLCSEEYED-----------EQSPEKIIELYAECIRLFH 122 (263)
T ss_dssp ECCSSEEHHHHCCT-----------TTCHHHHHHHHHHHHHHHH
T ss_pred EecCCeehhhccCC-----------cccHHHHHHHHHHHHHHHh
Confidence 99999998776321 1223478899999999999
No 421
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=88.67 E-value=0.86 Score=44.55 Aligned_cols=42 Identities=12% Similarity=0.175 Sum_probs=33.7
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||+++..+.+... ..++...+..++.++++.|+.||
T Consensus 115 ~~~~vme~v~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH 156 (359)
T 3dxp_A 115 RAFYIMEFVSGRVLWDQSL--------PGMSPAERTAIYDEMNRVIAAMH 156 (359)
T ss_dssp SCEEEEECCCCBCCCCTTC--------TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCeecCCCcc--------ccCCHHHHHHHHHHHHHHHHHHh
Confidence 4689999999988865221 23677788899999999999999
No 422
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=85.70 E-value=1.5 Score=40.09 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=28.3
Q ss_pred CceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 433 IDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 433 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+..++||||+++.++. ... . ....++.++++.+..||
T Consensus 87 ~~~~~~v~e~i~G~~l~--~~~---------~---~~~~~~~~l~~~l~~lh 124 (264)
T 1nd4_A 87 AGRDWLLLGEVPGQDLL--SSH---------L---APAEKVSIMADAMRRLH 124 (264)
T ss_dssp SSCEEEEEECCSSEETT--TSC---------C---CHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEecCCcccC--cCc---------C---CHhHHHHHHHHHHHHHh
Confidence 34578999999998884 221 1 12367899999999999
No 423
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=59.16 E-value=13 Score=34.71 Aligned_cols=22 Identities=14% Similarity=0.077 Sum_probs=17.8
Q ss_pred CCCccccCceecEEEEEeCCCc
Q 039925 399 SSNMIGQGSFGSVYKGILGEKW 420 (549)
Q Consensus 399 ~~~~lG~G~~g~Vy~~~~~~~~ 420 (549)
..+.||.|.++.||++...+|.
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~ 40 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGT 40 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSC
T ss_pred ceeeeCCcchhheEEEEeCCCC
Confidence 3456899999999999887665
No 424
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=57.57 E-value=13 Score=34.04 Aligned_cols=48 Identities=6% Similarity=-0.127 Sum_probs=35.4
Q ss_pred eEEEeccccCCCceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 422 AGYSEGTDFKGIDFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 422 ~g~~~~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
++++.. .+..++||||+++.++.+.... ....+..++.++++.+.-||
T Consensus 86 ~~~~~~-----~~~~~lvme~l~G~~~~~~~~~----------~~~~~~~~~~~l~~~L~~Lh 133 (272)
T 4gkh_A 86 KHFIRT-----PDDAWLLTTAIPGKTAFQVLEE----------YPDSGENIVDALAVFLRRLH 133 (272)
T ss_dssp EEEEEE-----TTEEEEEEECCCSEEHHHHHHH----------CGGGHHHHHHHHHHHHHHHH
T ss_pred EEEEEE-----CCeEEEEEEeeCCccccccccC----------CHHHHHHHHHHHHHHHHHhc
Confidence 455655 5678999999999887766432 12334568889999999999
No 425
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=44.67 E-value=28 Score=32.65 Aligned_cols=43 Identities=16% Similarity=0.048 Sum_probs=33.9
Q ss_pred ceEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 434 DFKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 434 ~~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
+..++||||++|.++.+..- ..++...+..++.++++.|+.||
T Consensus 86 g~~~~v~e~i~G~~l~~~~~--------~~l~~~~~~~~~~~lg~~La~LH 128 (306)
T 3tdw_A 86 GNPFVGYRKVQGQILGEDGM--------AVLPDDAKDRLALQLAEFMNELS 128 (306)
T ss_dssp SCEEEEEECCCSEECHHHHH--------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeccCCeECchhhh--------hhCCHHHHHHHHHHHHHHHHHHh
Confidence 45679999999988876322 12566778889999999999999
No 426
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=42.05 E-value=37 Score=32.80 Aligned_cols=68 Identities=13% Similarity=0.071 Sum_probs=45.3
Q ss_pred CCccccCceecEEEEEeCCCce-------------------------------eEEEeccccCCCceEEEEEeecCCCCc
Q 039925 400 SNMIGQGSFGSVYKGILGEKWT-------------------------------AGYSEGTDFKGIDFKAVVFDYMQNRSL 448 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~~~~-------------------------------~g~~~~~~~~~~~~~~lv~ey~~~GsL 448 (549)
.+.++.|....+|+....++.. ++.+... .+..++||||+++.++
T Consensus 46 i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~----~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDVGGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFS----ESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEESS----SSCEEEEEECCCSEET
T ss_pred EEECCCCCcceEEEEEECCcEEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccCC----CCCeEEEEEecCCCCc
Confidence 3457888888999887544332 2333320 2457899999998665
Q ss_pred ccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 449 EDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 449 ~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
.+. +...+..++.++++.|+-||
T Consensus 122 ~~l-------------~~~~~~~~~~~lg~~La~LH 144 (362)
T 3ovc_A 122 QDL-------------PETELPAVLQPVAEAMDAIA 144 (362)
T ss_dssp TTS-------------CGGGSGGGHHHHHHHHHHHH
T ss_pred ccC-------------CHHHHHHHHHHHHHHHHHHh
Confidence 432 23345567889999999999
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=37.88 E-value=67 Score=30.28 Aligned_cols=60 Identities=10% Similarity=0.078 Sum_probs=40.6
Q ss_pred CCccccCceecEEEEEeCCCce----------------------------------eEEEeccccCCCceEEEEEeecCC
Q 039925 400 SNMIGQGSFGSVYKGILGEKWT----------------------------------AGYSEGTDFKGIDFKAVVFDYMQN 445 (549)
Q Consensus 400 ~~~lG~G~~g~Vy~~~~~~~~~----------------------------------~g~~~~~~~~~~~~~~lv~ey~~~ 445 (549)
.+.|+.|.+..+|+....++.. ++.+.. .+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEEEEeccC
Confidence 3457888888899877544332 233333 4567899999998
Q ss_pred CCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 446 RSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 446 GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..+.. ..+.++++.|+-||
T Consensus 116 ~~~~~--------------------~~~~~lG~~LA~LH 134 (312)
T 3jr1_A 116 SKNKQ--------------------SSFTIFAEKIAQLH 134 (312)
T ss_dssp CCCCT--------------------THHHHHHHHHHHHH
T ss_pred CCCCc--------------------hhHHHHHHHHHHHH
Confidence 65310 24567889999999
No 428
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.43 E-value=34 Score=26.08 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=24.0
Q ss_pred ccccccccCCCCCCCEEEeecceeeeeCCccccCCCCCCEEeccc
Q 039925 119 SGQLLDFIGNPSAIQVMIFKENSLEGKFPNTLSNLRSLFYDNINR 163 (549)
Q Consensus 119 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 163 (549)
+.+-...|.++.+|+.+.|..+ ++..-...|.++.+|+.+.+..
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3334445666666666666543 2224445566666666666654
No 429
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=32.62 E-value=27 Score=32.97 Aligned_cols=42 Identities=19% Similarity=0.209 Sum_probs=33.1
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++|.++.+... ..++..++..++.++++.++.||
T Consensus 101 ~~~lvme~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH 142 (320)
T 3r70_A 101 DRFNIMKYIKGERITYEQY--------HKLSEKEKDALAYDEATFLKELH 142 (320)
T ss_dssp SSCEEEECCCCBCCCHHHH--------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecCCcccccccc--------ccCCHHHHHHHHHHHHHHHHHHh
Confidence 3478999999998874332 13566777889999999999999
No 430
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.31 E-value=95 Score=23.50 Aligned_cols=37 Identities=19% Similarity=0.062 Sum_probs=15.0
Q ss_pred cccCCCCCCEEEccCCcceecCCccccCCCCCCEeecc
Q 039925 52 HVGNFGYLRFINLVDNNFRGEIPEKVGRLFRLEYLLLA 89 (549)
Q Consensus 52 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 89 (549)
+|.+++.|+.+.|..+ ++..-...|.++.+|+.+.+.
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3444444444444332 221222344444444444443
No 431
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=31.15 E-value=19 Score=33.65 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=33.4
Q ss_pred eEEEEEeecCCCCcccccccCCCCCCCCCCchhhhHHHHHHHHHHHHHhh
Q 039925 435 FKAVVFDYMQNRSLEDWPYQSNNKLKPSSLSMIRKLSTTIDVASAIEYLR 484 (549)
Q Consensus 435 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~~l~~~~~~~ia~~va~gl~yLH 484 (549)
..++||||++|.++.+... ..++..++..++.++++.++.||
T Consensus 90 ~~~~vm~~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~la~LH 131 (304)
T 3sg8_A 90 MSFAGFTKIKGVPLTPLLL--------NNLPKQSQNQAAKDLARFLSELH 131 (304)
T ss_dssp CSCEEEECCCCEECCHHHH--------HTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEcccCCeECCcccc--------ccCCHHHHHHHHHHHHHHHHHHH
Confidence 3478899999988865332 13667778899999999999999
No 432
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=29.03 E-value=19 Score=18.37 Aligned_cols=10 Identities=40% Similarity=1.132 Sum_probs=7.3
Q ss_pred CCCCCCCcce
Q 039925 28 IDLCQWRGVT 37 (549)
Q Consensus 28 ~~~c~w~gv~ 37 (549)
+.-|+|+|..
T Consensus 5 dgacswrgle 14 (23)
T 3ox7_P 5 DGACSWRGLE 14 (26)
T ss_pred Ccccccccch
Confidence 3579999864
Done!