BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039931
(783 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 289 bits (740), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 303/617 (49%), Gaps = 30/617 (4%)
Query: 50 TIRSCCIAAHIFAAEDL----RLLAQDVVTWVISRIGAGRSKHMVEFMCDDFHLFGSDFR 105
T+R CI HI L ++LA+DV + A + + + + + L S
Sbjct: 79 TLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASL---VFKSLQETYDLCYSTSS 135
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVG-DYGSVWKLFRD 164
V D ++ Y R+ + + + I++ + G MP + + + +R + +F++
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 165 MIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQ 224
M+ P+ +T+N LI GFC G I + +L M C+ + YN LI+ YC
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC---- 251
Query: 225 TSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAP 284
L K G + + +GL PN++ YN ++NG + + + + + EM R +
Sbjct: 252 ---KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 285 DAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFF 344
D VT+N ++ G+CK G + ++ GL P+ Y + +C AG ++ AMEF
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 345 EDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKK 404
+ M +G+ P+ + +++ +S+ G A+ + M+ G +PS T ++L+ G C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 405 GRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAF 464
G++ +A +L M EKG + V+++ +L G+ R D+ A + E+ + I PD + +
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 465 SAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQ 524
S+ I G + EA ++ EM R+G P+ F Y +LI +C G L +AL+L EM +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 525 KGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI----------- 573
KG+LPD T++++ING KQ R + A + ++ VP VTY+TLI
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 574 ----GGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVS 629
G+C + AD++ M PD T YNI +HG+C + +A + E+V
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 630 AGIVPNTVTYNTLMNGV 646
+G + +TVT L+ +
Sbjct: 669 SGFLLHTVTVIALVKAL 685
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 284/535 (53%), Gaps = 25/535 (4%)
Query: 177 FNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGR 236
F+ ++ + R I S++H+ + + +YN +++A IR + + + +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA-TIRSKRNISFAE----- 190
Query: 237 MIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGH 296
+F + E +SPNV YN L+ G+ A +ID A L+++M ++ P+ VT+N ++ G+
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 297 CKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSI 356
CK ++DG +LLR +++ GL PN Y++ + GLC GR+ E +M +G S
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 357 FAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCK 416
+N++I Y + G A + M + GLTPS T +SL+ +CK G + A + L +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 417 MIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
M +G N+ +T L+DG+ + G + A + E+N P V ++A ING G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 477 VDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNI 536
+++A V +M G P+ +Y+++++GFC ++EAL+++REM +KG+ PD T++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 537 IINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGG 596
+I GFC+Q R K A D + +M R GL PD TY LI YC D+ +A +L N+M G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 597 LDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAII 656
+ PD+ TY++ ++G + +A +L +L VP+ VTY+TL+ C +I ++++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVV 609
Query: 657 IAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
L+ FC +GM + + + + D T+Y IM
Sbjct: 610 ------------------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 218/433 (50%), Gaps = 13/433 (3%)
Query: 322 TLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRA----GLEENAFE 377
+++D+ V +D+A+ G P + ++N+++ A R+ EN F
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF- 193
Query: 378 AYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYF 437
K M + ++P+ T + L+ G C G + A L KM KG N V + L+DGY
Sbjct: 194 --KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 438 RIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNF 497
++ + L + + + P+ ++++ INGL + G + E V EM+R G+ +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 498 AYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDM 557
YN+LI G+C G ++AL + EM + GL P T+ +I+ CK G M A++ F+D
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQ 370
Query: 558 YRT-GLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRK 616
R GL P+ TY TL+ G+ + + A ++ +M G P + TYN ++G+C K
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 617 MNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDI-LDRAIIIAAKLLKMAFVPNVVTTNV 675
M A +L+++ G+ P+ V+Y+T+++G C +D A+ + ++++ P+ +T +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 676 LLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKS 732
L+ FC+Q ++ +++ + DE +Y + AY ++++ + E EK
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 733 LFLDFLMGCMTLN 745
+ D + + +N
Sbjct: 551 VLPDVVTYSVLIN 563
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 188/425 (44%), Gaps = 27/425 (6%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
+L+H + ME L +MR G+ P+E T L + G +++ R+M
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G PS T+NALI G C G + ++L M + D +Y+ +++ +C A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
L R+ +M+ E+G+ P+ + Y++L+ G+ + R +A LYEEM + PD T
Sbjct: 470 L------RVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
+ +++ +C G +E +L ++ G+LP+ Y + + GL R EA +F
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLP 408
+ PS ++++I S + + SL+ G C KG +
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFK--------------------SVVSLIKGFCMKGMMT 622
Query: 409 EAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYI 468
EA + M+ K + A+ +++ G+ R GD+ A +L+ E+ + V A +
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 469 NGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
L K G V+E V + + R + L+ G ++ L + EM + G L
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFL 742
Query: 529 PDNFT 533
P+ +
Sbjct: 743 PNGIS 747
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 37/369 (10%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
F +AL++G+ + + +L M+E G+ P + + + R D
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
++ R+M+ G +P T+++LI GFC + L M + D F Y LINAY
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C+ G AL + + + E+G+ P+VV Y+ L+NG K +A L ++
Sbjct: 531 CMEGDLEKAL-------QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDIT-----VAGLCWA 334
+ P VT++ L+ NC+ + + G C
Sbjct: 584 EESVPSDVTYHT-------------------------LIENCSNIEFKSVVSLIKGFCMK 618
Query: 335 GRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTC 394
G + EA + FE M K P A+N +I + RAG A+ YK M + G + T
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 395 SSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNR 454
+L+ L K+G++ E ++ ++ VL++ R G++ + E+ +
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 455 RKIFPDAVA 463
P+ ++
Sbjct: 739 DGFLPNGIS 747
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 302/623 (48%), Gaps = 33/623 (5%)
Query: 129 RMREVG---IMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFC 185
RM G + P IL R G + ++I G R F L+ G C
Sbjct: 74 RMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 133
Query: 186 RNGCIRIGESL---LHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
+ R +++ L M + C+ + F+YNIL+ C ++ AL + M+
Sbjct: 134 ADK--RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEAL-------ELLHMM 184
Query: 243 QEE---GLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
++ G P+VV Y ++NG+ K D D+A Y EM R I PD VT+N I++ CK
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
M+ +L + +G++P+C Y+ + G C +G+ EA+ F + M G+ P + +
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
+ ++ + G A + + M + GL P T +LL G KG L E LL M+
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
G + F++L+ Y + G + A +++++ ++ + P+AV + A I L K+G V++
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 424
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
A F +M G P N YNSLI G C K A +L EM +G+ + FN II+
Sbjct: 425 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
CK+GR+ + F M R G+ P+++TYNTLI GYC A + A +L++ M + GL P
Sbjct: 485 SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP 544
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAIIIAA 659
+ TY+ ++GYC I +M A ++ E+ S+G+ P+ +TYN ++ G + AA
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG----LFQTRRTAAA 600
Query: 660 KLLKMAFVPN-----VVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRA 714
K L + + + T N++L CK + + L Q L + + ++ IM A
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 715 YHNIQENAEFFQETSEKSLFLDF 737
+ N E K LF+ F
Sbjct: 661 LLKVGRNDE------AKDLFVAF 677
Score = 236 bits (602), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 182/682 (26%), Positives = 305/682 (44%), Gaps = 72/682 (10%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEI-LYRMREVGIMPSESAITILFKSLL---RVGDY 155
F D LL G + +++ M+I L RM E+G +P+ + IL K L R +
Sbjct: 118 FRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEA 177
Query: 156 GSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNIL 215
+ + D G P ++ +I GF + G S H M + D YN +
Sbjct: 178 LELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI 237
Query: 216 INAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYE 275
I A C A+ + + + + G+ P+ + YN++L+GY + +A +
Sbjct: 238 IAALCKAQAMDKAM-------EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 276 EMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAG 335
+MRS + PD VT+++++ CK G + ++ ++ GL P T Y + G G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
L E + M GI P + F+ +I AY++ G + A + M Q GL P++ T
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
+++ LCK GR+ +A +MI++G + + L+ G A+ L E+ R
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
I + + F++ I+ K G V E+ +F M RIG PN YN+LI G+C GK++EA
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
+KL M GL P+ T++ +ING+CK RM+ A+ F +M +G+ PDI+TYN ++ G
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG 590
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELV------- 628
+ A EL ++ G +++TYNI +HG C + + A M L
Sbjct: 591 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLE 650
Query: 629 ----------------------------SAGIVPNTVTYNTLMNGVCCDILDRAIIIAAK 660
S G+VPN TY + +I+ + ++
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE----NIIGQGLLEELD 706
Query: 661 LLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRA--YHNI 718
L ++ N T + + +F + + ++ EI+ RA Y ++
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQR--------GEIT------------RAGTYLSM 746
Query: 719 QENAEFFQETSEKSLFLDFLMG 740
+ F E S SLF+D L G
Sbjct: 747 IDEKHFSLEASTASLFIDLLSG 768
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 199/479 (41%), Gaps = 54/479 (11%)
Query: 54 CCIAAHIFAAEDLRLLAQDVVTWVISRIGAGRSKHMVEF--MCDDFHLFG--SDFRVLDA 109
C A IF + R L ++ T+ G +VE + D G D V
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L+ Y + + M + +MR+ G+ P+ + L + G F MI G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 170 PRPSNYTFNALILGFCR-NGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
P N +N+LI G C N R E +L ++ + +C+ F +N +I+++C G+ +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIES 495
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
+F+++ G+ PNV+ YN L+NGY A +D+A L M S + P+ VT
Sbjct: 496 -------EKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNC--------------------------- 321
++ +++G+CK MED L +++ SG+ P+
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 322 --------TLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
+ Y+I + GLC D+A++ F+++ + FN +I A + G +
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 374 NAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLL 433
A + + GL P+ T + + +G L E L M + G ++ ++
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAG------LVDEAYGVFLE 486
+ G++ A + + ++ + +A S +I+ LS + E Y F+E
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFLPEKYKSFIE 787
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 299/604 (49%), Gaps = 13/604 (2%)
Query: 70 AQDVVTWVISRIGAGRSKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYR 129
AQ + +I R G R + +V + F GS+ V D L+ Y++ E E
Sbjct: 132 AQSCLLRMIRRSGVSRLE-IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTL 190
Query: 130 MREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGC 189
+R G S A L SL+R+G W +++++ G + YT N ++ C++G
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 190 I-RIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLS 248
+ ++G L V K + D YN LI+AY +G A + + + +G S
Sbjct: 251 MEKVGTFLSQVQEKGV-YPDIVTYNTLISAYSSKGLMEEAFE-------LMNAMPGKGFS 302
Query: 249 PNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRL 308
P V YN ++NG K ++A ++ EM ++PD+ T+ ++ CK G + + +++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 309 LRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSR 368
D+ ++P+ + ++ +G LD+A+ +F + E G+ P + +I Y R
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 369 AGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVA 428
G+ A M Q G T +++L GLCK+ L EA L +M E+ +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 429 FTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMS 488
T+L+DG+ ++G+L A L+ ++ ++I D V ++ ++G K G +D A ++ +M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 489 RIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMK 548
+P +Y+ L+ C++G L EA ++ EM K + P N +I G+C+ G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 549 PAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKM--YAGGLDPDITTYNI 606
M G VPD ++YNTLI G+ + ++ +A LV KM GGL PD+ TYN
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 607 RMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG-VCCDILDRAIIIAAKLLKMA 665
+HG+C +M +A ++L +++ G+ P+ TY ++NG V D L A I ++L+
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 666 FVPN 669
F P+
Sbjct: 723 FSPD 726
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 237/463 (51%), Gaps = 1/463 (0%)
Query: 250 NVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLL 309
N V++ L+ YV+AR + +A+ + +RS+ N ++ + G +E +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 310 RDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRA 369
+++S SG+ N +I V LC G++++ F + EKG+ P I +N++I+AYS
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 370 GLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAF 429
GL E AFE M G +P T ++++ GLCK G+ A ++ +M+ G + +
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 430 TVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSR 489
LL + GD++ + +++++ R + PD V FS+ ++ +++G +D+A F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 490 IGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKP 549
G +P+N Y LI G+C +G ++ A+ L EM Q+G D T+N I++G CK+ +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 550 AIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMH 609
A F +M L PD T LI G+CK ++ A EL KM + D+ TYN +
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 610 GYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVP 668
G+ + ++ A + ++VS I+P ++Y+ L+N +C L A + +++ P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 669 NVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
V+ N ++ +C+ G + +K+ F D SY +
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 252/526 (47%), Gaps = 38/526 (7%)
Query: 239 FDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCK 298
F +++ +G + ++ NAL+ V+ ++ A +Y+E+ + + T NI+V+ CK
Sbjct: 188 FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCK 247
Query: 299 YGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFA 358
G ME L + G+ P+ Y+ ++ G ++EA E M KG SP ++
Sbjct: 248 DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 359 FNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMI 418
+N++I + G E A E + M + GL+P S T SLL+ CKKG + E + M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 419 EKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVD 478
+ + V F+ ++ + R G+L A +N + + PD V ++ I G + G++
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 479 EAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIII 538
A + EM + G + YN+++ G C R L EA KL EM ++ L PD++T I+I
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 539 NGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE----------- 587
+G CK G ++ A++ F M + D+VTYNTL+ G+ K DI A E
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 588 --------LVN----------------KMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMM 623
LVN +M + + P + N + GYC +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 624 LDELVSAGIVPNTVTYNTLMNG-VCCDILDRAIIIAAKLLKM--AFVPNVVTTNVLLSHF 680
L++++S G VP+ ++YNTL+ G V + + +A + K+ + VP+V T N +L F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 681 CKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAYHNIQENAEFFQ 726
C+Q ++ + +K+ E + D ++Y M + + E F+
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 204/466 (43%), Gaps = 44/466 (9%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + L+ Y + E E++ M G P + L + G Y ++F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+M+ G P + T+ +L++ C+ G + E + M V D ++ +++ +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G AL M F+ ++E GL P+ V+Y L+ GY + I A L EM +
Sbjct: 389 GNLDKAL-------MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
A D VT+N I+ G CK + + D+L +++ L P+ I + G C G L AME
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
F+ M EK I + +N+++ + + G + A E + M + P+ + S L+ LC
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
KG L EA+ + +MI K + ++ GY R G+ +S ++ PD +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 463 AFSAYINGLSKAGLVDEAYGVF--LEMSRIGFVPNNFAYNSLIAGFCNRGK--------- 511
+++ I G + + +A+G+ +E + G VP+ F YNS++ GFC + +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 512 --------------------------LNEALKLEREMRQKGLLPDN 531
L EA ++ EM Q+G PD+
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 2/390 (0%)
Query: 311 DLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAG 370
D + S N +++D+ + A +L EA E F + KG + SI A N++I + R G
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214
Query: 371 LEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFT 430
E A+ Y+ + + G+ + T + ++ LCK G++ + L ++ EKG + V +
Sbjct: 215 WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 431 VLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRI 490
L+ Y G + A L N + + P ++ INGL K G + A VF EM R
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 491 GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPA 550
G P++ Y SL+ C +G + E K+ +MR + ++PD F+ +++ F + G + A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 551 IDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG 610
+ F + GL+PD V Y LI GYC+ I A L N+M G D+ TYN +HG
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 611 YCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPN 669
C + + +A + +E+ + P++ T L++G C L A+ + K+ + +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 670 VVTTNVLLSHFCKQG-MPEKTLLWGQKLSE 698
VVT N LL F K G + +W +S+
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 197/413 (47%), Gaps = 24/413 (5%)
Query: 331 LCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPS 390
L +GRL +A M + + NS+ + +S G ++ F+
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDL------------ 170
Query: 391 SCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWN 450
L+ + +L EA + + KGF ++ A L+ RIG + A ++
Sbjct: 171 ------LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 451 ELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFL-EMSRIGFVPNNFAYNSLIAGFCNR 509
E++R + + + +N L K G + E G FL ++ G P+ YN+LI+ + ++
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKM-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 510 GKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTY 569
G + EA +L M KG P +T+N +ING CK G+ + A + F +M R+GL PD TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 570 NTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVS 629
+L+ CK D+V +++ + M + + PD+ ++ M + +++A M + +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 630 AGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEK 688
AG++P+ V Y L+ G C ++ A+ + ++L+ +VVT N +L CK+ M +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 689 TLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKSLFLDFL 738
+++E + D + I+ + N+Q E FQ+ EK + LD +
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 59/316 (18%)
Query: 458 FPD----AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRG--- 510
FP+ +++ SA I+ L ++G + +A L M R V NSL + F N G
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 511 --------------KLNEALK-----------------------------------LERE 521
KL EA + + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 522 MRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALD 581
+ + G+ + +T NI++N CK G+M+ + G+ PDIVTYNTLI Y
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 582 IVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNT 641
+ A EL+N M G P + TYN ++G C K +A + E++ +G+ P++ TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 642 LMNGVC--CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
L+ C D+++ + + + VP++V + ++S F + G +K L++ + E
Sbjct: 346 LLMEACKKGDVVETEKVF-SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 700 SFDFDETSYKIMDRAY 715
D Y I+ + Y
Sbjct: 405 GLIPDNVIYTILIQGY 420
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 295/623 (47%), Gaps = 55/623 (8%)
Query: 61 FAAEDLRLLAQDVVTWVISRIGAGRSKH-------MVEFMCDDFHLFGSDFRVLDALLHG 113
A +DL+ DVVT+ G + + M E +C F + +L+ G
Sbjct: 288 LAGKDLK---PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC---LRFSPSEAAVSSLVEG 341
Query: 114 YLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPS 173
+ E + ++ R+ + G+ P+ L SL + + LF M +G RP+
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 174 NYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCG 233
+ T++ LI FCR G + S L M + YN LIN +C G S A G
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG--- 458
Query: 234 AGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIV 293
+ +MI ++ L P VV Y +L+ GY I++A LY EM + IAP TF ++
Sbjct: 459 ---FMAEMINKK-LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 294 SGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGIS 353
SG + G + D +L +++ + PN Y++ + G C G + +A EF ++M EKGI
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 354 PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDL 413
P +++ +I G A +H+ + + LL G C++G+L EA +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 414 LCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSK 473
+M+++G ++ V + VL+DG + D L E++ R + PD V +++ I+ SK
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 474 AGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA------------------ 515
G EA+G++ M G VPN Y ++I G C G +NEA
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 516 --------LKLEREMRQ---------KGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMY 558
K E +M++ KGLL + T+N++I GFC+QGR++ A + M
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 559 RTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMN 618
G+ PD +TY T+I C+ D+ +A EL N M G+ PD YN +HG C +M
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 619 QAAMMLDELVSAGIVPNTVTYNT 641
+A + +E++ G++PN T T
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRT 897
Score = 232 bits (592), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 172/709 (24%), Positives = 316/709 (44%), Gaps = 92/709 (12%)
Query: 108 DALLHGYLRVEMSAEVME--ILYRM--REVGIMPSESAITILFKSLLRVGDYGSVWKLFR 163
D L+ Y+R S V++ ++++M +V ++P ++ L L++ +G +LF
Sbjct: 160 DLLIQHYVR---SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFN 216
Query: 164 DMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRG 223
DM+ +G RP Y + +I C + + ++ M C + YN+LI+ C +
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 224 QTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIA 283
+ A+G I + + L P+VV Y L+ G K ++ + + +EM +
Sbjct: 277 KVWEAVG-------IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 284 PDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEF 343
P + +V G K G +E+ L++ + G+ PN +Y+ + LC + EA
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 344 FEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCK 403
F+ M + G+ P+ ++ +I + R G + A M GL S +SL+ G CK
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 404 KGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVA 463
G + A + +MI K V +T L+ GY G + A L++E+ + I P
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 464 FSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMR 523
F+ ++GL +AGL+ +A +F EM+ PN YN +I G+C G +++A + +EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 524 QKGLLPDNFTFNIIING-----------------------------------FCKQGRMK 548
+KG++PD +++ +I+G FC++G+++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 549 PAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRM 608
A+ +M + G+ D+V Y LI G K D L+ +M+ GL PD Y +
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 609 HGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFV 667
+A + D +++ G VPN VTY ++NG+C ++ A ++ +K+ ++ V
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 668 PNVVTT-----------------------------------NVLLSHFCKQGMPEK---- 688
PN VT N+L+ FC+QG E+
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 689 -TLLWGQKLSEISFDFDETSYKIMDRAYHNIQENAEFFQETSEKSLFLD 736
T + G +S + ++ R +++++ E + +EK + D
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRR--NDVKKAIELWNSMTEKGIRPD 856
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 248/524 (47%), Gaps = 8/524 (1%)
Query: 235 GRMIFDM-IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIV 293
G ++F M I + L P V +ALL+G VK R A L+ +M S I PD + ++
Sbjct: 175 GVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVI 234
Query: 294 SGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGIS 353
C+ + ++ + +G N Y++ + GLC ++ EA+ +D+ K +
Sbjct: 235 RSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLK 294
Query: 354 PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDL 413
P + + +++ + E E M +PS SSL+ GL K+G++ EA +L
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 414 LCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSK 473
+ ++++ G N + L+D + A+ L++ + + + P+ V +S I+ +
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 474 AGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFT 533
G +D A EM G + + YNSLI G C G ++ A EM K L P T
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 534 FNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMY 593
+ ++ G+C +G++ A+ + +M G+ P I T+ TL+ G +A I A +L N+M
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 594 AGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILD 652
+ P+ TYN+ + GYC M++A L E+ GIVP+T +Y L++G+C
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 653 RAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMD 712
A + L K N + LL FC++G E+ L Q++ + D D Y ++
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 713 RAYHNIQENAEFF---QETSEKSLFLDFLMGCMTLNV---TGDF 750
++ FF +E ++ L D ++ ++ TGDF
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/570 (29%), Positives = 273/570 (47%), Gaps = 8/570 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF DM+ P PS F+ L+ + + SL M + + Y+ILIN +C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q S AL + + + G P++V N+LLNG+ I A L +M
Sbjct: 128 RRSQLSLALA-------VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD+ TFN ++ G ++ + L+ + V G P+ Y I V GLC G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ + M + I P + +N+II A +A + M G+ P+ T +SL+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR +A LL MIE+ N V F+ L+D + + G L+ A+ L++E+ +R I PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+S+ ING +DEA +F M PN YN+LI GFC +++E ++L R
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM Q+GL+ + T+ +I+GF + A F M G++PDI+TY+ L+ G C
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ A + + ++PDI TYNI + G C K+ + L G+ PN VTY
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 641 TLMNGVCCDIL-DRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
T+M+G C L + A + ++ + +P+ T N L+ + G + +++
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 700 SFDFDETSYKIMDRAYHNIQENAEFFQETS 729
F D ++ ++ H+ + + F + S
Sbjct: 601 RFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 254/507 (50%), Gaps = 7/507 (1%)
Query: 137 PSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESL 196
PS + L ++ ++ + V L M +LG + YT++ LI FCR + + ++
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 197 LHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNA 256
L M K D N L+N +C + S A+ G+M+ E G P+ +N
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL--VGQMV-----EMGYQPDSFTFNT 191
Query: 257 LLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSG 316
L++G + +A L + M + PD VT+ I+V+G CK G ++ LL+ +
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 317 LLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAF 376
+ P +Y+ + LC +++A+ F +M KGI P++ +NS+I G +A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 377 EAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGY 436
M + + P+ T S+L+ K+G+L EA L +MI++ + ++ L++G+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 437 FRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNN 496
L A+ ++ + + FP+ V ++ I G KA VDE +F EMS+ G V N
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 497 FAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMD 556
Y +LI GF + + A + ++M G+LPD T++I+++G C G+++ A+ F
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 557 MYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRK 616
+ R+ + PDI TYN +I G CKA + +L + G+ P++ TY M G+C
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 617 MNQAAMMLDELVSAGIVPNTVTYNTLM 643
+A + E+ G +P++ TYNTL+
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 229 bits (583), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 240/494 (48%), Gaps = 7/494 (1%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L++ + R + + +L +M ++G P + L L M+ +G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 170 PRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYAL 229
+P ++TFN LI G R+ +L+ M C D Y I++N C RG AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 230 GKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTF 289
+ +++ + P VV+YN +++ ++++ A L+ EM ++ I P+ VT+
Sbjct: 242 S-------LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 290 NIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFE 349
N ++ C YG D RLL D+ + PN + + G+L EA + +++M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 350 KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
+ I P IF ++S+I + + A +++M P+ T ++L+ G CK R+ E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
+L +M ++G N V +T L+ G+F+ + AQ ++ ++ + PD + +S ++
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLP 529
GL G V+ A VF + R P+ + YN +I G C GK+ + L + KG+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 530 DNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELV 589
+ T+ +++GFC++G + A F +M G +PD TYNTLI + + D + EL+
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 590 NKMYAGGLDPDITT 603
+M + D +T
Sbjct: 595 REMRSCRFVGDAST 608
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 221/469 (47%), Gaps = 7/469 (1%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+ D L++LL+G+ ++ + ++ +M E+G P L L R
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P T+ ++ G C+ G I + SLL M + YN +I+A
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C + AL +F + +G+ PNVV YN+L+ A+ L +M
Sbjct: 267 CNYKNVNDALN-------LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
R I P+ VTF+ ++ K G + + ++L ++ + P+ Y + G C RLDE
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A FE M K P++ +N++I + +A + E ++ M Q GL ++ T ++L+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
G + A + +M+ G + + +++LLDG G + A ++ L R K+ P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D ++ I G+ KAG V++ + +F +S G PN Y ++++GFC +G EA L
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVT 568
REM+++G LPD+ T+N +I + G + + +M V D T
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 229/513 (44%), Gaps = 44/513 (8%)
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
++D L D+ S P+ + ++ + + D + E M GIS +++ ++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I + R A M + G P T +SLL G C R+ +A L+ +M+E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
+ + F L+ G FR A +L + + + PD V + +NGL K G +D A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
+ +M + P YN++I CN +N+AL L EM KG+ P+ T+N +I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDI 601
C GR A DM + P++VT++ LI + K +V A++L ++M +DPDI
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 602 TTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-------------- 647
TY+ ++G+C ++++A M + ++S PN VTYNTL+ G C
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 648 ----------------------CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGM 685
D A I+ +++ +P+++T ++LL C G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 686 PEKTLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKSLFLDFLMGCM 742
E L+ + L + D +Y IM +++ + F S K + + +
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV--TY 539
Query: 743 TLNVTGDFCVQSMKLQTAAIGRRGRKAAVWPLP 775
T ++G FC + +K + A+ R ++ PLP
Sbjct: 540 TTMMSG-FCRKGLKEEADALFREMKEEG--PLP 569
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 209/431 (48%), Gaps = 8/431 (1%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+LD+A+ F DM + PSI F+ +++A ++ + + M G++ + T S
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
L+ C++ +L A +L KM++ G+ + V LL+G+ + A SL ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
PD+ F+ I+GL + EA + M G P+ Y ++ G C RG ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
L L ++M Q + P +N II+ C + A++ F +M G+ P++VTYN+LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C A L++ M ++P++ T++ + + K+ +A + DE++ I P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 636 TVTYNTLMNGVCC-DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
TY++L+NG C D LD A + ++ PNVVT N L+ FCK ++ + +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 695 KLSEISFDFDETSYKIMDRAYHNIQE--NAEF-FQETSEKSLFLDFLMGCMTLNVTGDFC 751
++S+ + +Y + + +E NA+ F++ + D MT ++ D
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI----MTYSILLDGL 476
Query: 752 VQSMKLQTAAI 762
+ K++TA +
Sbjct: 477 CNNGKVETALV 487
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
+ + + M GI P+ L + L G + +L DMI P+ TF+ALI
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDM 241
F + G + E L M K D F Y+ LIN +C+ + A + +F++
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-------KHMFEL 386
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
+ + PNVV YN L+ G+ KA+ +D+ L+ EM R + + VT+ ++ G +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
++ + + + G+LP+ Y I + GLC G+++ A+ FE + + P I+ +N
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I +AG E+ ++ + + G+ P+ T ++++ G C+KG EA L +M E+G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
+ + L+ + R GD + L E+ + DA N L G +D+++
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD-GRLDKSF 625
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 86 SKHMVEFMC--DDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAIT 143
+KHM E M D F + + L+ G+ + + E ME+ M + G++ + T
Sbjct: 380 AKHMFELMISKDCF----PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 144 ILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKY 203
L + + + +F+ M+ G P T++ L+ G C NG + + + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 204 MCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVK 263
D + YNI+I C GK G +F + +G+ PNVV Y +++G+ +
Sbjct: 496 KMEPDIYTYNIMIEGMC-------KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 264 ARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTL 323
++A+ L+ EM+ PD+ T+N ++ H + G L+R++ + + +
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Query: 324 YDITVAGLCWAGRLDEA 340
+ V + GRLD++
Sbjct: 609 IGL-VTNMLHDGRLDKS 624
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 115/241 (47%), Gaps = 4/241 (1%)
Query: 497 FAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMD 556
+ Y + N KL++A+ L +M + P F+ +++ K + I
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 557 MYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRK 616
M G+ ++ TY+ LI +C+ + A ++ KM G +PDI T N ++G+C+ +
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 617 MNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNV 675
++ A ++ ++V G P++ T+NTL++G+ + A+ + +++ P++VT +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 676 LLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRA---YHNIQENAEFFQETSEKS 732
+++ CK+G + L +K+ + + Y + A Y N+ + F E K
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 733 L 733
+
Sbjct: 287 I 287
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 268/570 (47%), Gaps = 8/570 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF DM+ P PS FN L+ + + SL M D + Y+I IN +C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q S AL + + + G P++V ++LLNGY ++ I A L ++M
Sbjct: 130 RRSQLSLALA-------VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD TF ++ G + + L+ + G P+ Y V GLC G +D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ + M + I + +N+II + ++A + M G+ P T SSL+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR +A LL MIE+ N V F+ L+D + + G L+ A+ L++E+ +R I PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+S+ ING +DEA +F M PN Y++LI GFC ++ E ++L R
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM Q+GL+ + T+ +I+GF + A F M G+ P+I+TYN L+ G CK
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A + + ++PDI TYNI + G C K+ + L G+ PN + YN
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 641 TLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
T+++G C + A + K+ + +PN T N L+ + G E + +++
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 700 SFDFDETSYKIMDRAYHNIQENAEFFQETS 729
F D ++ ++ H+ + + F S
Sbjct: 603 GFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 264/542 (48%), Gaps = 11/542 (2%)
Query: 103 DFR-VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKL 161
D+R +L L ++V+ + ++ + + R PS L ++ ++ + V L
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRP---FPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 162 FRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCI 221
M LG YT++ I FCR + + ++L M K D + L+N YC
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 222 RGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRD 281
+ S A+ + D + E G P+ + L++G +A L ++M R
Sbjct: 166 SKRISDAVA-------LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 282 IAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAM 341
PD VT+ +V+G CK G ++ LL+ + + + +Y+ + GLC +D+A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 342 EFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGL 401
F +M KGI P +F ++S+I+ G +A M + + P+ T S+L+
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 402 CKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDA 461
K+G+L EA L +MI++ + ++ L++G+ L A+ ++ + + FP+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 462 VAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLERE 521
V +S I G KA V+E +F EMS+ G V N Y +LI GF + A + ++
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 522 MRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALD 581
M G+ P+ T+NI+++G CK G++ A+ F + R+ + PDI TYN +I G CKA
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 582 IVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNT 641
+ EL + G+ P++ YN + G+C +A +L ++ G +PN+ TYNT
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 642 LM 643
L+
Sbjct: 579 LI 580
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 224/446 (50%), Gaps = 1/446 (0%)
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDI 326
+D A L+ +M P V FN ++S K E L + G+ + Y I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
+ C +L A+ M + G P I +S++ Y + +A M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQ 446
P + T ++L+ GL + EA L+ +M+++G + V + +++G + GD+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 447 SLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGF 506
SL ++ + KI D V ++ I+GL K +D+A +F EM G P+ F Y+SLI+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 507 CNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDI 566
CN G+ ++A +L +M ++ + P+ TF+ +I+ F K+G++ A + +M + + PDI
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 567 VTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDE 626
TY++LI G+C + A + M + P++ TY+ + G+C +++ + + E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 627 LVSAGIVPNTVTYNTLMNG-VCCDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGM 685
+ G+V NTVTY TL++G D A ++ +++ + PN++T N+LL CK G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 686 PEKTLLWGQKLSEISFDFDETSYKIM 711
K ++ + L + + D +Y IM
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIM 509
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 226/487 (46%), Gaps = 34/487 (6%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+ D L +LL+GY + ++ + ++ +M E+G P T L L
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P T+ ++ G C+ G I + SLL M K AD YN +I+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 220 C-------------------IRGQ--TSYALGKC--------GAGRMIFDMIQEEGLSPN 250
C IR T +L C A R++ DMI E ++PN
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPN 327
Query: 251 VVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLR 310
VV ++AL++ +VK + +A LY+EM R I PD T++ +++G C + +++ +
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 311 DLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAG 370
+ PN Y + G C A R++E ME F +M ++G+ + + ++I + +A
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 371 LEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFT 430
+NA +K M G+ P+ T + LL GLCK G+L +A + + + +
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 431 VLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRI 490
++++G + G + L+ L+ + + P+ +A++ I+G + G +EA + +M
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 491 GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPA 550
G +PN+ YN+LI G + +L +EMR G D T ++ N GR+
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN-MLHDGRLDK- 625
Query: 551 IDAFMDM 557
+F+DM
Sbjct: 626 --SFLDM 630
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 185/364 (50%), Gaps = 1/364 (0%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
++D+A++ F DM + PSI FN +++A ++ E + M G++ T S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
+ C++ +L A +L KM++ G+ + V + LL+GY + A +L +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
PD F+ I+GL EA + +M + G P+ Y +++ G C RG ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
L L ++M + + D +N II+G CK M A++ F +M G+ PD+ TY++LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C A L++ M ++P++ T++ + + K+ +A + DE++ I P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 636 TVTYNTLMNGVCC-DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
TY++L+NG C D LD A + ++ PNVVT + L+ FCK E+ + +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 695 KLSE 698
++S+
Sbjct: 423 EMSQ 426
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Query: 469 NGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
N LS VD+A +F +M + P+ +N L++ K + L +M+ G+
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 529 PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADEL 588
D +T++I IN FC++ ++ A+ M + G PDIVT ++L+ GYC + I A L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 589 VNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC- 647
V++M G PD T+ +HG K ++A ++D++V G P+ VTY T++NG+C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 648 -CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCK 682
DI D A+ + K+ K +VV N ++ CK
Sbjct: 236 RGDI-DLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 17/266 (6%)
Query: 85 RSKHMVEFMC--DDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAI 142
+KHM E M D F + L+ G+ + + E ME+ M + G++ +
Sbjct: 381 EAKHMFELMISKDCF----PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 143 TILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHK 202
T L + D + +F+ M+ +G P+ T+N L+ G C+NG + + + +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 203 YMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYV 262
D + YNI+I C GK G +F + +G+SPNV+ YN +++G+
Sbjct: 497 STMEPDIYTYNIMIEGMC-------KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 263 KARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCT 322
+ ++A+ L ++M+ P++ T+N ++ + G E L++++ G + +
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 609
Query: 323 LYDITVAGLCWAGRLDEAMEFFEDMF 348
+ V + GRLD++ F DM
Sbjct: 610 TIGL-VTNMLHDGRLDKS---FLDML 631
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 254/525 (48%), Gaps = 8/525 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF +M+ P PS FN L+ + + SL M D ++YNILIN +C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q AL G + + G P++V ++LLNGY + I +A L ++M
Sbjct: 127 RRSQLPLALAVLGK-------MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
+ P+ VTFN ++ G + + L+ + G P+ Y V GLC G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ + M + I + + +II A +A + M G+ P+ T +SL+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR +A LL MIE+ N V F+ L+D + + G L+ A+ L++E+ +R I PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+S+ ING +DEA +F M PN YN+LI GFC ++ E ++L R
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM Q+GL+ + T+N +I G + G A F M G+ PDI+TY+ L+ G CK
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A + + ++PDI TYNI + G C K+ + L G+ PN + Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 641 TLMNGVCCDIL-DRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
T+++G C L + A + ++ + +PN T N L+ + G
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 247/510 (48%), Gaps = 7/510 (1%)
Query: 136 MPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGES 195
+PS L ++ ++ + V L M +L Y++N LI FCR + + +
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 196 LLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYN 255
+L M K D + L+N YC + S A+ + D + PN V +N
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA-------LVDQMFVMEYQPNTVTFN 189
Query: 256 ALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVS 315
L++G +A L + M +R PD T+ +V+G CK G ++ LL+ +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 316 GLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENA 375
+ + +Y + LC +++A+ F +M KGI P++ +NS+I G +A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 376 FEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDG 435
M + + P+ T S+L+ K+G+L EA L +MI++ + ++ L++G
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 436 YFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPN 495
+ L A+ ++ + + FP+ V ++ I G KA V+E +F EMS+ G V N
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 496 NFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFM 555
YN+LI G G + A K+ ++M G+ PD T++I+++G CK G+++ A+ F
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 556 DMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIR 615
+ ++ + PDI TYN +I G CKA + +L + G+ P++ Y + G+C
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 616 KMNQAAMMLDELVSAGIVPNTVTYNTLMNG 645
+A + E+ G +PN+ TYNTL+
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 228/474 (48%), Gaps = 7/474 (1%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+ D L +LL+GY + +E + ++ +M + P+ L L
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P +T+ ++ G C+ G I + SLL M K AD Y +I+A
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C + AL +F + +G+ PNVV YN+L+ A+ L +M
Sbjct: 266 CNYKNVNDALN-------LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
R I P+ VTF+ ++ K G + + ++L ++ + P+ Y + G C RLDE
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A FE M K P++ +N++I + +A E E ++ M Q GL ++ T ++L+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
GL + G A + KM+ G P + + +++LLDG + G L A ++ L + K+ P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D ++ I G+ KAG V++ + +F +S G PN Y ++I+GFC +G EA L
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI 573
REM++ G LP++ T+N +I + G + + +M G V D T + +I
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 239/504 (47%), Gaps = 7/504 (1%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + L++ + R + +L +M ++G P ++ L L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
M + +P+ TFN LI G + +L+ M C D F Y ++N C R
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G AL + +++ + +VV+Y +++ ++++ A L+ EM ++ I
Sbjct: 234 GDIDLALS-------LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
P+ VT+N ++ C YG D RLL D+ + PN + + G+L EA +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
+++M ++ I P IF ++S+I + + A +++M P+ T ++L+ G C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
K R+ E +L +M ++G N V + L+ G F+ GD AQ ++ ++ + PD +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM 522
+S ++GL K G +++A VF + + P+ + YN +I G C GK+ + L +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 523 RQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDI 582
KG+ P+ + +I+GFC++G + A F +M G +P+ TYNTLI + D
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 583 VRADELVNKMYAGGLDPDITTYNI 606
+ EL+ +M + G D +T ++
Sbjct: 587 AASAELIKEMRSCGFVGDASTISM 610
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 253/541 (46%), Gaps = 49/541 (9%)
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
+M+Q L P++V +N LL+ K D L E M++ I+ D ++NI+++ C+
Sbjct: 70 EMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRR 128
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
+ +L + G P+ + G C R+ EA+ + MF P+ F
Sbjct: 129 SQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
N++I GL + EA L+ +M+
Sbjct: 189 NTLIH-----------------------------------GLFLHNKASEAVALIDRMVA 213
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
+G + + +++G + GD+ A SL ++ + KI D V ++ I+ L V++
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
A +F EM G PN YNSLI CN G+ ++A +L +M ++ + P+ TF+ +I+
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
F K+G++ A + +M + + PDI TY++LI G+C + A + M + P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC----CDILDRAI 655
++ TYN + G+C +++ + + E+ G+V NTVTYNTL+ G+ CD+ +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK-- 451
Query: 656 IIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAY 715
I K++ P+++T ++LL CK G EK L+ + L + + D +Y IM
Sbjct: 452 -IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 716 ---HNIQENAEFFQETSEKSLFLDFLMGCMTLNVTGDFCVQSMKLQTAAIGRRGRKAAVW 772
+++ + F S K + + ++ T ++G FC + +K + A+ R ++
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVII--YTTMISG-FCRKGLKEEADALFREMKEDGTL 567
Query: 773 P 773
P
Sbjct: 568 P 568
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 174/366 (47%), Gaps = 11/366 (3%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
+ + + M GI P+ L + L G + +L DMI P+ TF+ALI
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDM 241
F + G + E L M K D F Y+ LIN +C+ + A + +F++
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA-------KHMFEL 385
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
+ + PNVV YN L+ G+ KA+ +++ L+ EM R + + VT+N ++ G + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
+ ++ + + G+ P+ Y I + GLC G+L++A+ FE + + + P I+ +N
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I +AG E+ ++ + + G+ P+ ++++ G C+KG EA L +M E G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
N + L+ R GD + L E+ DA S IN L G ++++Y
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEKSY 624
Query: 482 GVFLEM 487
LEM
Sbjct: 625 ---LEM 627
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
+L +A DL +M++ + V F LL ++ SL + +I D +++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
IN + + A V +M ++G+ P+ +SL+ G+C+ +++EA+ L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRA 585
P+ TFN +I+G + A+ M G PD+ TY T++ G CK DI A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 586 DELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG 645
L+ KM G ++ D+ Y + CN + +N A + E+ + GI PN VTYN+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 646 VC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
+C A + + +++ PNVVT + L+ F K+G
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 7/275 (2%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D +L++G+ + E + M P+ L K + +LF
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
R+M G + T+N LI G + G + + + M D Y+IL++ C
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G+ AL ++F+ +Q+ + P++ YN ++ G KA ++ L+ + + +
Sbjct: 479 GKLEKAL-------VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
P+ + + ++SG C+ G E+ D L R++ G LPN Y+ + G + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFE 377
++M G + +I LE++ E
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/566 (28%), Positives = 272/566 (48%), Gaps = 8/566 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF +M+ P PS F+ L+ + + SL M + + Y+ILIN +C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q AL G + + G PN+V ++LLNGY ++ I +A L ++M
Sbjct: 128 RRSQLPLALAVLGK-------MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
P+ VTFN ++ G + + L+ + G P+ Y + V GLC G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
M + + P + +N+II + ++A +K M G+ P+ T SSL+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR +A LL MIE+ + F+ L+D + + G L+ A+ L++E+ +R I P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
V +S+ ING +DEA +F M P+ YN+LI GFC ++ E +++ R
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM Q+GL+ + T+NI+I G + G A + F +M G+ P+I+TYNTL+ G CK
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A + + ++P I TYNI + G C K+ + L G+ P+ V YN
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 641 TLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
T+++G C + A + ++ + +PN N L+ + G E + +++
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 700 SFDFDETSYKIMDRAYHNIQENAEFF 725
F D ++ ++ H+ + + F
Sbjct: 601 GFAGDASTIGLVTNMLHDGRLDKSFL 626
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 251/507 (49%), Gaps = 7/507 (1%)
Query: 137 PSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESL 196
PS + L ++ ++ + V L M +LG ++YT++ LI FCR + + ++
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 197 LHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNA 256
L M K + + L+N YC + S A+ + D + G PN V +N
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA-------LVDQMFVTGYQPNTVTFNT 191
Query: 257 LLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSG 316
L++G +A L + M ++ PD VT+ ++V+G CK G + LL +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 317 LLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAF 376
L P +Y+ + GLC +D+A+ F++M KGI P++ ++S+I+ G +A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 377 EAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGY 436
M + + P T S+L+ K+G+L EA L +M+++ + V ++ L++G+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 437 FRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNN 496
L A+ ++ + + FPD V ++ I G K V+E VF EMS+ G V N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 497 FAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMD 556
YN LI G G + A ++ +EM G+ P+ T+N +++G CK G+++ A+ F
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 557 MYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRK 616
+ R+ + P I TYN +I G CKA + +L + G+ PD+ YN + G+C
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 617 MNQAAMMLDELVSAGIVPNTVTYNTLM 643
+A + E+ G +PN+ YNTL+
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 240/494 (48%), Gaps = 7/494 (1%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L++ + R + +L +M ++G P+ ++ L L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 170 PRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYAL 229
+P+ TFN LI G + +L+ M C D Y +++N C RG T A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 230 GKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTF 289
+ + +++ L P V++YN +++G K + +D A L++EM ++ I P+ VT+
Sbjct: 242 N-------LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 290 NIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFE 349
+ ++S C YG D RLL D+ + P+ + + G+L EA + +++M +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 350 KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
+ I PSI ++S+I + + A + ++ M P T ++L+ G CK R+ E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
++ +M ++G N V + +L+ G F+ GD AQ ++ E+ + P+ + ++ ++
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLP 529
GL K G +++A VF + R P + YN +I G C GK+ + L + KG+ P
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 530 DNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELV 589
D +N +I+GFC++G + A F +M G +P+ YNTLI + D + EL+
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 590 NKMYAGGLDPDITT 603
+M + G D +T
Sbjct: 595 KEMRSCGFAGDAST 608
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 217/463 (46%), Gaps = 7/463 (1%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
L +LL+GY + +E + ++ +M G P+ L L L M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
+ G +P T+ ++ G C+ G + +LL+ M + YN +I+ C
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
AL +F ++ +G+ PNVV Y++L++ A+ L +M R I PD
Sbjct: 273 DDALN-------LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
TF+ ++ K G + + ++L ++ + P+ Y + G C RLDEA + FE
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
M K P + +N++I + + E E ++ M Q GL ++ T + L+ GL + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
A ++ +M+ G P N + + LLDG + G L A ++ L R K+ P ++
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
I G+ KAG V++ + +F +S G P+ AYN++I+GFC +G EA L +EM++
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVT 568
G LP++ +N +I + G + + + +M G D T
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 223/449 (49%), Gaps = 7/449 (1%)
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDI 326
+D A L+ EM P + F+ ++S K + L + G+ N Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
+ C +L A+ M + G P+I +S++ Y + A M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQ 446
P++ T ++L+ GL + EA L+ +M+ KG + V + V+++G + GD A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 447 SLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGF 506
+L N++ + K+ P + ++ I+GL K +D+A +F EM G PN Y+SLI+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 507 CNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDI 566
CN G+ ++A +L +M ++ + PD FTF+ +I+ F K+G++ A + +M + + P I
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 567 VTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDE 626
VTY++LI G+C + A ++ M + PD+ TYN + G+C +++ + + E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 627 LVSAGIVPNTVTYNTLMNGVC----CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCK 682
+ G+V NTVTYN L+ G+ CD+ A I +++ PN++T N LL CK
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDM---AQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 683 QGMPEKTLLWGQKLSEISFDFDETSYKIM 711
G EK ++ + L + +Y IM
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 1/377 (0%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+LD+A+ F +M + PSI F+ +++A ++ + + M G+ + T S
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
L+ C++ +LP A +L KM++ G+ N V + LL+GY + A +L +++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
P+ V F+ I+GL EA + M G P+ Y ++ G C RG + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
L +M Q L P +N II+G CK M A++ F +M G+ P++VTY++LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C A L++ M ++PD+ T++ + + K+ +A + DE+V I P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 636 TVTYNTLMNGVCC-DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
VTY++L+NG C D LD A + ++ P+VVT N L+ FCK E+ + +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 695 KLSEISFDFDETSYKIM 711
++S+ + +Y I+
Sbjct: 421 EMSQRGLVGNTVTYNIL 437
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 172/376 (45%), Gaps = 8/376 (2%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+ + ++ G + + + + + M GI P+ + L L G + +L DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
I P +TF+ALI F + G + E L M K Y+ LIN +C+ +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
A + +F+ + + P+VV YN L+ G+ K + +++ ++ EM R + +
Sbjct: 378 DEA-------KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
VT+NI++ G + G + + +++ G+ PN Y+ + GLC G+L++AM FE
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
+ + P+I+ +N +I +AG E+ ++ + + G+ P ++++ G C+KG
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
EA L +M E G N + L+ R GD + L E+ DA
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610
Query: 466 AYINGLSKAGLVDEAY 481
N L G +D+++
Sbjct: 611 LVTNMLHD-GRLDKSF 625
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 125/264 (47%), Gaps = 13/264 (4%)
Query: 85 RSKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITI 144
+K M EFM H F D + L+ G+ + + E ME+ M + G++ + I
Sbjct: 379 EAKQMFEFMVSK-HCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 145 LFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYM 204
L + L + GD ++F++M+ G P+ T+N L+ G C+NG + + + +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 205 CVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKA 264
+ YNI+I C GK G +F + +G+ P+VV YN +++G+ +
Sbjct: 497 MEPTIYTYNIMIEGMC-------KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 265 RDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLY 324
++A+ L++EM+ P++ +N ++ + G E L++++ G + +
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 325 DITVAGLCWAGRLDEAMEFFEDMF 348
+ V + GRLD++ F DM
Sbjct: 610 GL-VTNMLHDGRLDKS---FLDML 629
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 263/570 (46%), Gaps = 8/570 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF M+ P PS FN L+ + + SL M + V + YNILIN +C
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q S AL G + + G P++V ++LLNGY + I A L ++M
Sbjct: 132 RRSQISLALALLGK-------MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD +TF ++ G + + L+ + G PN Y + V GLC G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ M I + FN+II + + ++A +K M G+ P+ T SSL+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR +A LL MIEK N V F L+D + + G + A+ L++++ +R I PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+++ +NG +D+A +F M P+ YN+LI GFC ++ + +L R
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM +GL+ D T+ +I G G A F M G+ PDI+TY+ L+ G C
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A E+ + M + DI Y + G C K++ + L G+ PN VTYN
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 641 TLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
T+++G+C +L A + K+ + +PN T N L+ + G + +++
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Query: 700 SFDFDETSYKIMDRAYHNIQENAEFFQETS 729
F D ++ ++ H+ + + F S
Sbjct: 605 RFVGDASTIGLVANMLHDGRLDKSFLDMLS 634
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 254/549 (46%), Gaps = 7/549 (1%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ LL +++ V+ + +M+ + I+ IL R L M+
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
LG PS T ++L+ G+C I +L+ M + D + LI+ + + S
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAV 287
A+ + D + + G PN+V Y ++NG K D D A L +M + I D V
Sbjct: 209 AVA-------LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 288 TFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDM 347
FN I+ CKY ++D L +++ G+ PN Y ++ LC GR +A + DM
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 348 FEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRL 407
EK I+P++ FN++I A+ + G A + Y M + + P T +SL+ G C RL
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 408 PEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAY 467
+A + M+ K + V + L+ G+ + + L+ E++ R + D V ++
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
I GL G D A VF +M G P+ Y+ L+ G CN GKL +AL++ M++ +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE 587
D + + +I G CK G++ D F + G+ P++VTYNT+I G C + A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 588 LVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
L+ KM G P+ TYN + + +A ++ E+ S V + T + N +
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Query: 648 CDILDRAII 656
LD++ +
Sbjct: 622 DGRLDKSFL 630
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 223/463 (48%), Gaps = 7/463 (1%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
L +LL+GY + ++ + ++ +M E+G P T L L L M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
+ G +P+ T+ ++ G C+ G + +LL+ M AD +N +I++ C
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
AL +F ++ +G+ PNVV Y++L++ A+ L +M + I P+
Sbjct: 277 DDALN-------LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
VTFN ++ K G + ++L D+ + P+ Y+ V G C RLD+A + FE
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
M K P + +N++I + ++ E+ E ++ M GL + T ++L+ GL G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
A + +M+ G P + + +++LLDG G L A +++ + + +I D ++
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
I G+ KAG VD+ + +F +S G PN YN++I+G C++ L EA L ++M++
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVT 568
G LP++ T+N +I + G + + +M V D T
Sbjct: 570 GPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 225/458 (49%), Gaps = 13/458 (2%)
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMED----GDRLL 309
Y +L + +D A L+ M P V FN ++S K + G+++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 310 RDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRA 369
R V GL Y+I + C ++ A+ M + G PSI +S++ Y
Sbjct: 113 RLEIVHGLYT----YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 370 GLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAF 429
+A M + G P + T ++L+ GL + EA L+ +M+++G N V +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 430 TVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSR 489
V+++G + GD A +L N++ KI D V F+ I+ L K VD+A +F EM
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 490 IGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKP 549
G PN Y+SLI+ C+ G+ ++A +L +M +K + P+ TFN +I+ F K+G+
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 550 AIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMH 609
A + DM + + PDI TYN+L+ G+C + +A ++ M + PD+ TYN +
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 610 GYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVP 668
G+C +++ + E+ G+V +TVTY TL+ G+ D D A + +++ P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 669 NVVTTNVLLSHFCKQGMPEKTLL---WGQKLSEISFDF 703
+++T ++LL C G EK L + QK SEI D
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDI 505
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 180/386 (46%), Gaps = 11/386 (2%)
Query: 102 SDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKL 161
+D + + ++ + + + + M GI P+ + L L G + +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 162 FRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCI 221
DMI P+ TFNALI F + G E L M K D F YN L+N +C+
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 222 RGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRD 281
+ A + +F+ + + P+VV YN L+ G+ K++ ++ L+ EM R
Sbjct: 378 HDRLDKA-------KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 282 IAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAM 341
+ D VT+ ++ G G ++ ++ + + G+ P+ Y I + GLC G+L++A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 342 EFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGL 401
E F+ M + I I+ + ++I +AG ++ ++ + + G+ P+ T ++++ GL
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 402 CKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDA 461
C K L EA+ LL KM E G N + L+ + R GD + L E+ + DA
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 610
Query: 462 VAFSAYINGLSKAGLVDEAYGVFLEM 487
N L G +D++ FL+M
Sbjct: 611 STIGLVANMLHD-GRLDKS---FLDM 632
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 4/247 (1%)
Query: 491 GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPA 550
F + Y ++ + KL++A+ L M + LP FN +++ K +
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 551 IDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG 610
I M R +V + TYN LI +C+ I A L+ KM G +P I T + ++G
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 611 YCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV-CCDILDRAIIIAAKLLKMAFVPN 669
YC+ ++++ A ++D++V G P+T+T+ TL++G+ + A+ + ++++ PN
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 670 VVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYK-IMDR--AYHNIQENAEFFQ 726
+VT V+++ CK+G + L K+ + D + I+D Y ++ + F+
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 727 ETSEKSL 733
E K +
Sbjct: 285 EMETKGI 291
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 178/638 (27%), Positives = 303/638 (47%), Gaps = 27/638 (4%)
Query: 69 LAQDVVTWVISRIGAGRSKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVE-MSAE----- 122
LA + WV+ + G + H+V+ +C H+ R+ D H + MS +
Sbjct: 52 LALKFLKWVVKQPGL-ETDHIVQLVCITTHIL-VRARMYDPARHILKELSLMSGKSSFVF 109
Query: 123 -VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
+ YR+ + S IL + LR G ++FR M G PS YT NA++
Sbjct: 110 GALMTTYRLCN----SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 165
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRG---QTSYALGKCGAGRMI 238
++G S L M K D +NILIN C G ++SY + K
Sbjct: 166 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQK------- 218
Query: 239 FDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCK 298
+++ G +P +V YN +L+ Y K A L + M+S+ + D T+N+++ C+
Sbjct: 219 ---MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 299 YGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFA 358
+ G LLRD+ + PN Y+ + G G++ A + +M G+SP+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 359 FNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMI 418
FN++I + G + A + + +M GLTPS + LL GLCK A +M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 419 EKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVD 478
G + ++ +T ++DG + G L A L NE+++ I PD V +SA ING K G
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 479 EAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIII 538
A + + R+G PN Y++LI C G L EA+++ M +G D+FTFN+++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 539 NGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLD 598
CK G++ A + M G++P+ V+++ LI GY + + ++A + ++M G
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575
Query: 599 PDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIII 657
P TY + G C + +A L L + +TV YNTL+ +C L +A+ +
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Query: 658 AAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQK 695
++++ + +P+ T L+S C++G +L+ ++
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 202/845 (23%), Positives = 351/845 (41%), Gaps = 153/845 (18%)
Query: 35 AFAFFKLVVCD---DSESTIRSCCIAAHIFAAEDLRLLAQDVVTWVISRIGAGRSKHMVE 91
A F K VV +++ ++ CI HI + A+ ++ + + +G+S +
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVFG 110
Query: 92 FMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLR 151
+ + L S+ V D L+ YLR M + +EI M G PS + S+++
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 152 VGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFA 211
G+ SVW ++M+ P TFN LI C G L+ M K
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230
Query: 212 YNILINAYCIRGQTSYAL----------------------------GKCGAGRMIFDMIQ 243
YN +++ YC +G+ A+ + G ++ ++
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
Query: 244 EEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGME 303
+ + PN V YN L+NG+ + A+ L EM S ++P+ VTFN ++ GH G +
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350
Query: 304 DGDRLLRDLSVSGLLPNCTLYDI-----------------------------------TV 328
+ ++ + GL P+ Y + +
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 329 AGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLT 388
GLC G LDEA+ +M + GI P I ++++I + + G + A E +++ GL+
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 389 PSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSL 448
P+ S+L+ C+ G L EA + MI +G + F VL+ + G + A+
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 449 WNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCN 508
+ I P+ V+F ING +G +A+ VF EM+++G P F Y SL+ G C
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 509 RGKLNEALKLER-----------------------------------EMRQKGLLPDNFT 533
G L EA K + EM Q+ +LPD++T
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 534 FNIIINGFCKQGRMKPAI-------------------DAFMD-----------------M 557
+ +I+G C++G+ AI F+D M
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 558 YRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKM 617
G PDIVT N +I GY + I + ++L+ +M P++TTYNI +HGY + +
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770
Query: 618 NQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVL 676
+ + ++ ++ GI+P+ +T ++L+ G+C ++L+ + I + + T N+L
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 830
Query: 677 LSHFCKQGMPEKTLLWGQKLSE------ISFDFD--ETSYKIMDRAYHNIQENAEFFQET 728
+S C G + W L + IS D D + +++R H QE+ E
Sbjct: 831 ISKCCANG----EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN-HRFQESRMVLHEM 885
Query: 729 SEKSL 733
S++ +
Sbjct: 886 SKQGI 890
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/678 (23%), Positives = 277/678 (40%), Gaps = 79/678 (11%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+AL+ G++ E +++ Y M G+ PSE + +L L + ++ + M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
G T+ +I G C+NG + LL+ M K D Y+ LIN +C
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC----- 449
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
+G+ + I I GLSPN ++Y+ L+ + + +A +YE M D
Sbjct: 450 --KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
TFN++V+ CK G + + + +R ++ G+LPN +D + G +G +A F+
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
+M + G P+ F + S++ + G A + K +H + ++LL +CK G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 406 RLPEAWDLLCKMIE-------------------KGFPI-----------------NKVAF 429
L +A L +M++ KG + NKV +
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 430 TVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSR 489
T +DG F+ G +++ PD V +A I+G S+ G +++ + EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 490 IGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKP 549
PN YN L+ G+ R ++ + L R + G+LPD T + ++ G C+ ++
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 550 AIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMH 609
+ G+ D T+N LI C +I A +LV M + G+ D T + +
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 610 GYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC---------------------- 647
+ ++ M+L E+ GI P + Y L+NG+C
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 648 --------------CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWG 693
C D A ++ +LKM VP + + L+ CK G + L
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987
Query: 694 QKLSEISFDFDETSYKIM 711
+S D SY ++
Sbjct: 988 VVMSNCGLKLDLVSYNVL 1005
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/571 (24%), Positives = 246/571 (43%), Gaps = 10/571 (1%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + L+ + AE E + M GI+P+ + L G+ + +F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+M +G P+ +T+ +L+ G C+ G +R E L +H D YN L+ A C
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR-D 281
G + A+ G +M+Q L P+ Y +L++G + A + +E +R +
Sbjct: 627 GNLAKAVSLFG------EMVQRSIL-PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679
Query: 282 IAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAM 341
+ P+ V + V G K G + G + G P+ + + G G++++
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739
Query: 342 EFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGL 401
+ +M + P++ +N ++ YS+ +F Y+ + G+ P TC SL++G+
Sbjct: 740 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Query: 402 CKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDA 461
C+ L +L I +G +++ F +L+ G++ A L + I D
Sbjct: 800 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 859
Query: 462 VAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLERE 521
A ++ L++ E+ V EMS+ G P + Y LI G C G + A ++ E
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 919
Query: 522 MRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALD 581
M + P N + ++ K G+ A M + LVP I ++ TL+ CK +
Sbjct: 920 MIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 979
Query: 582 IVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNT 641
++ A EL M GL D+ +YN+ + G C M A + +E+ G + N TY
Sbjct: 980 VIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKA 1039
Query: 642 LMNGVCC--DILDRAIIIAAKLLKMAFVPNV 670
L+ G+ A II LL F+ ++
Sbjct: 1040 LIRGLLARETAFSGADIILKDLLARGFITSM 1070
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 246/491 (50%), Gaps = 10/491 (2%)
Query: 146 FKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMC 205
+ ++R G+ +K +M++ G P LI GFCR G R +L ++
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 206 VADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKAR 265
V D YN++I+ YC G+ + AL ++ +SP+VV YN +L +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNAL----------SVLDRMSVSPDVVTYNTILRSLCDSG 218
Query: 266 DIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYD 325
+ QA + + M RD PD +T+ I++ C+ G+ +LL ++ G P+ Y+
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 326 ITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQF 385
+ V G+C GRLDEA++F DM G P++ N I+ + G +A + M +
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 386 GLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGA 445
G +PS T + L+ LC+KG L A D+L KM + G N +++ LL G+ + + A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 446 QSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAG 505
+ R +PD V ++ + L K G V++A + ++S G P YN++I G
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 506 FCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPD 565
GK +A+KL EMR K L PD T++ ++ G ++G++ AI F + R G+ P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 566 IVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLD 625
VT+N+++ G CK+ RA + + M G P+ T+Y I + G +A +L+
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 626 ELVSAGIVPNT 636
EL + G++ +
Sbjct: 579 ELCNKGLMKKS 589
Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 224/447 (50%), Gaps = 4/447 (0%)
Query: 245 EGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMED 304
G P+++ L+ G+ + +A + E + PD +T+N+++SG+CK G + +
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 305 GDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIA 364
+L +SVS P+ Y+ + LC +G+L +AME + M ++ P + + +I
Sbjct: 191 ALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 365 AYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPI 424
A R +A + M G TP T + L+ G+CK+GRL EA L M G
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 425 NKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVF 484
N + ++L G + A+ L ++ R+ P V F+ IN L + GL+ A +
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 485 LEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQ 544
+M + G PN+ +YN L+ GFC K++ A++ M +G PD T+N ++ CK
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 545 GRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTY 604
G+++ A++ + G P ++TYNT+I G KA +A +L+++M A L PD TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 605 NIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLK 663
+ + G K+++A E GI PN VT+N++M G+C DRAI ++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 664 MAFVPNVVTTNVLLSHFCKQGMPEKTL 690
PN + +L+ +GM ++ L
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEAL 574
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 237/500 (47%), Gaps = 14/500 (2%)
Query: 102 SDFRVLDALLHGYLRVEMSAEVME----ILYRMREVGIMPSESAITILFKSLLRVGDYGS 157
S F + D + +LR + +E L M G +P T L + R+G
Sbjct: 96 SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 158 VWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILIN 217
K+ + G P T+N +I G+C+ G I + L V+ + D YN ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEI---NNALSVLDRMSVSPDVVTYNTILR 212
Query: 218 AYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEM 277
+ C G+ A+ + D + + P+V+ Y L+ + + A L +EM
Sbjct: 213 SLCDSGKLKQAM-------EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 278 RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRL 337
R R PD VT+N++V+G CK G +++ + L D+ SG PN ++I + +C GR
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 338 DEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
+A + DM KG SPS+ FN +I R GL A + + M Q G P+S + + L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
L G CK+ ++ A + L +M+ +G + V + +L + G + A + N+L+ +
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 458 FPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
P + ++ I+GL+KAG +A + EM P+ Y+SL+ G GK++EA+K
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 518 LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
E + G+ P+ TFN I+ G CK + AID + M G P+ +Y LI G
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 578 KALDIVRADELVNKMYAGGL 597
A EL+N++ GL
Sbjct: 566 YEGMAKEALELLNELCNKGL 585
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 234/487 (48%), Gaps = 7/487 (1%)
Query: 252 VVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRD 311
V N L V+ ++++ E M PD + ++ G C+ G ++L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 312 LSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGL 371
L SG +P+ Y++ ++G C AG ++ A+ + M +SP + +N+I+ + +G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 372 EENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTV 431
+ A E M Q P T + L+ C+ + A LL +M ++G + V + V
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 432 LLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIG 491
L++G + G L A N++ P+ + + + + G +A + +M R G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 492 FVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAI 551
F P+ +N LI C +G L A+ + +M Q G P++ ++N +++GFCK+ +M AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 552 DAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGY 611
+ M G PDIVTYNT++ CK + A E++N++ + G P + TYN + G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 612 CNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNV 670
K +A +LDE+ + + P+T+TY++L+ G+ + +D AI + +M PN
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 671 VTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDR--AYHNIQENA-EFFQE 727
VT N ++ CK ++ + + + +ETSY I+ AY + + A E E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 728 TSEKSLF 734
K L
Sbjct: 580 LCNKGLM 586
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 10/426 (2%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + ++ GY + + +L RM + P + +SL G ++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
M+ P T+ LI CR+ + LL M C D YN+L+N C
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G+ A+ + + DM G PNV+ +N +L A L +M +
Sbjct: 288 GRLDEAI------KFLNDM-PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
+P VTFNI+++ C+ G + +L + G PN Y+ + G C ++D A+E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
+ E M +G P I +N+++ A + G E+A E + G +P T ++++ GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
K G+ +A LL +M K + + ++ L+ G R G + A ++E R I P+AV
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM 522
F++ + GL K+ D A + M G PN +Y LI G G EAL+L E+
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 523 RQKGLL 528
KGL+
Sbjct: 581 CNKGLM 586
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 169/370 (45%), Gaps = 28/370 (7%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
+ ME+L RM + P TIL ++ R G KL +M G P T+N L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA------------- 228
G C+ G + L+ M C + +NI++ + C G+ A
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 229 ---------------LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANML 273
G G I + + + G PN + YN LL+G+ K + +D+A
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 274 YEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCW 333
E M SR PD VT+N +++ CK G +ED +L LS G P Y+ + GL
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 334 AGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCT 393
AG+ +A++ ++M K + P ++S++ SR G + A + + + G+ P++ T
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 394 CSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELN 453
+S+++GLCK + A D L MI +G N+ ++T+L++G G A L NEL
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581
Query: 454 RRKIFPDAVA 463
+ + + A
Sbjct: 582 NKGLMKKSSA 591
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 167/383 (43%), Gaps = 42/383 (10%)
Query: 49 STIRSCCIAAHIFAAEDL--RLLAQD----VVTWVI------SRIGAGRSKHMVEFMCDD 96
+ +RS C + + A ++ R+L +D V+T+ I G G + +++ M D
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD- 267
Query: 97 FHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYG 156
D + L++G + E ++ L M G P+ I+ +S+ G +
Sbjct: 268 -RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 157 SVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILI 216
KL DM+ G PS TFN LI CR G + +L M ++ C + +YN L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 217 NAYCIRGQTSYAL----------------------------GKCGAGRMIFDMIQEEGLS 248
+ +C + A+ GK I + + +G S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 249 PNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRL 308
P ++ YN +++G KA +A L +EMR++D+ PD +T++ +V G + G +++ +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 309 LRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSR 368
+ G+ PN ++ + GLC + + D A++F M +G P+ ++ +I +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 369 AGLEENAFEAYKIMHQFGLTPSS 391
G+ + A E + GL S
Sbjct: 567 EGMAKEALELLNELCNKGLMKKS 589
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 253 bits (645), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 239/487 (49%), Gaps = 7/487 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF M+ P PS + FN L+ + + SL M + + + YNILIN +C
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q S AL G + + G P++V ++LLNGY + I A L ++M
Sbjct: 132 RRSQISLALALLGK-------MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD +TF ++ G + + L+ + G PN Y + V GLC G +D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
M I ++ ++++I + + E++A + M G+ P+ T SSL+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC R +A LL MIE+ N V F L+D + + G L+ A+ L++E+ +R I PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+S+ ING +DEA +F M PN YN+LI GFC +++E ++L R
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM Q+GL+ + T+ +I+GF + A F M G+ P+I+TYNTL+ G CK
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A + + ++P I TYNI + G C K+ + L G+ P+ + YN
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 641 TLMNGVC 647
T+++G C
Sbjct: 545 TMISGFC 551
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 236/497 (47%), Gaps = 7/497 (1%)
Query: 107 LDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMI 166
+ LL +++ V+ + +M+ +GI + IL R L M+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 167 HLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTS 226
LG PS T ++L+ G+C I +L+ M + D + LI+ + + S
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 227 YALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDA 286
A+ + D + + G PN+V Y ++NG K DID A L +M + I +
Sbjct: 208 EAVA-------LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
V ++ ++ CKY +D L ++ G+ PN Y ++ LC R +A D
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGR 406
M E+ I+P++ FN++I A+ + G A + Y M + + P T SSL+ G C R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 407 LPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSA 466
L EA + MI K N V + L++G+ + + L+ E+++R + + V ++
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 467 YINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKG 526
I+G +A D A VF +M G PN YN+L+ G C GKL +A+ + +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 527 LLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRAD 586
+ P +T+NI+I G CK G+++ D F + G+ PD++ YNT+I G+C+ AD
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 587 ELVNKMYAGGLDPDITT 603
L KM G PD T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 202 bits (514), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 253/526 (48%), Gaps = 9/526 (1%)
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLS 313
Y +L + + +D A L+ M P FN ++S K + L +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 314 VSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
G+ N Y+I + C ++ A+ M + G PSI +S++ Y
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 374 NAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLL 433
+A M + G P + T ++L+ GL + EA L+ +M+++G N V + V++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFV 493
+G + GD+ A +L N++ KI + V +S I+ L K D+A +F EM G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 494 PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
PN Y+SLI+ CN + ++A +L +M ++ + P+ TFN +I+ F K+G++ A
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 554 FMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCN 613
+ +M + + PDI TY++LI G+C + A + M + P++ TYN ++G+C
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 614 IRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV-CCDILDRAIIIAAKLLKMAFVPNVVT 672
+++++ + E+ G+V NTVTY TL++G D A ++ +++ PN++T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 673 TNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETS 729
N LL CK G EK ++ + L + +Y IM +++ + F S
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 730 EKSLFLDFLMGCMTLNVTGDFCVQSMKLQTAAIGRRGRKAAVWPLP 775
K + D ++ ++G FC + +K + A+ R+ R+ PLP
Sbjct: 533 LKGVKPDVII--YNTMISG-FCRKGLKEEADALFRKMREDG--PLP 573
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 86 SKHMVEFMC--DDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAIT 143
+KHM E M D F + + L++G+ + + E +E+ M + G++ + T
Sbjct: 384 AKHMFELMISKDCF----PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 144 ILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKY 203
L + D + +F+ M+ G P+ T+N L+ G C+NG + + + +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 204 MCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVK 263
+ YNI+I C GK G +F + +G+ P+V++YN +++G+ +
Sbjct: 500 KMEPTIYTYNIMIEGMC-------KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 264 ARDIDQANMLYEEMRSRDIAPDAVT 288
++A+ L+ +MR PD+ T
Sbjct: 553 KGLKEEADALFRKMREDGPLPDSGT 577
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 17/223 (7%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D +L++G+ + E + M P+ L + +LF
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 163 RDMIHLGPRPSNYTFNALILGF-----CRNGCIRIGESLLHVMHKYMCVADFFAYNILIN 217
R+M G + T+ LI GF C N + + + +H + YN L++
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH-----PNIMTYNTLLD 478
Query: 218 AYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEM 277
C G+ A+ ++F+ +Q + P + YN ++ G KA ++ L+ +
Sbjct: 479 GLCKNGKLEKAM-------VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 278 RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPN 320
+ + PD + +N ++SG C+ G E+ D L R + G LP+
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/566 (28%), Positives = 261/566 (46%), Gaps = 8/566 (1%)
Query: 165 MIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQ 224
M+ P PS + FN L+ + + SL M + + + YNILIN +C R Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 225 TSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAP 284
S AL G + + G P++V ++LLNGY + I A L ++M P
Sbjct: 61 ISLALALLGK-------MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 285 DAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFF 344
D +TF ++ G + + L+ + G PN Y + V GLC G +D A
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 345 EDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKK 404
M I + FN+II + + ++A +K M G+ P+ T SSL+ LC
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 405 GRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAF 464
GR +A LL MIEK N V F L+D + + G + A+ L +++ +R I PD +
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 465 SAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQ 524
++ ING +D+A +F M P+ YN+LI GFC ++ + +L REM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 525 KGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVR 584
+GL+ D T+ +I G G A F M G+ PDI+TY+ L+ G C + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 585 ADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
A E+ + M + DI Y + G C K++ + L G+ PN VTYNT+++
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 645 GVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDF 703
G+C +L A + K+ + +P+ T N L+ + G + +++ F
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 533
Query: 704 DETSYKIMDRAYHNIQENAEFFQETS 729
D ++ ++ H+ + + F S
Sbjct: 534 DASTIGLVANMLHDGRLDKSFLDMLS 559
Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 249/534 (46%), Gaps = 7/534 (1%)
Query: 123 VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALIL 182
V+ + +M+ +GI + IL R L M+ LG PS T ++L+
Sbjct: 29 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 88
Query: 183 GFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
G+C I +L+ M + D + LI+ + + S A+ + D +
Sbjct: 89 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA-------LVDRM 141
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGM 302
+ G PN+V Y ++NG K DID A L +M + I D V FN I+ CKY +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
+D L +++ G+ PN Y ++ LC GR +A + DM EK I+P++ FN++
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
I A+ + G A + + M + + P T +SL+ G C RL +A + M+ K
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
+ + L+ G+ + + L+ E++ R + D V ++ I GL G D A
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
VF +M G P+ Y+ L+ G CN GKL +AL++ M++ + D + + +I G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 543 KQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDIT 602
K G++ D F + G+ P++VTYNT+I G C + A L+ KM G PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 603 TYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAII 656
TYN + + +A ++ E+ S V + T + N + LD++ +
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFL 555
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 224/463 (48%), Gaps = 7/463 (1%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
L +LL+GY + ++ + ++ +M E+G P T L L L M
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
+ G +P+ T+ ++ G C+ G I + +LL+ M AD +N +I++ C
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
AL +F ++ +G+ PNVV Y++L++ A+ L +M + I P+
Sbjct: 202 DDALN-------LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
VTFN ++ K G + ++L D+ + P+ Y+ + G C RLD+A + FE
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
M K P + +N++I + ++ E+ E ++ M GL + T ++L+ GL G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
A + +M+ G P + + +++LLDG G L A +++ + + +I D ++
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
I G+ KAG VD+ + +F +S G PN YN++I+G C++ L EA L ++M++
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVT 568
G LPD+ T+N +I + G + + +M V D T
Sbjct: 495 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 179/386 (46%), Gaps = 11/386 (2%)
Query: 102 SDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKL 161
+D + + ++ + + + + M GI P+ + L L G + +L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 162 FRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCI 221
DMI P+ TFNALI F + G E L M K D F YN LIN +C+
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 222 RGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRD 281
+ A + +F+ + + P++ YN L+ G+ K++ ++ L+ EM R
Sbjct: 303 HDRLDKA-------KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 282 IAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAM 341
+ D VT+ ++ G G ++ ++ + + G+ P+ Y I + GLC G+L++A+
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 342 EFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGL 401
E F+ M + I I+ + ++I +AG ++ ++ + + G+ P+ T ++++ GL
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 402 CKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDA 461
C K L EA+ LL KM E G + + L+ + R GD + L E+ + DA
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535
Query: 462 VAFSAYINGLSKAGLVDEAYGVFLEM 487
N L G +D++ FL+M
Sbjct: 536 STIGLVANMLHD-GRLDKS---FLDM 557
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 277/576 (48%), Gaps = 20/576 (3%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCR----NGCIRIGESL--LHVMHKYMCVADFFAYNI 214
LF +M+ P PS F+ L+ + + I GE + L V H + + YNI
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSH------NLYTYNI 105
Query: 215 LINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLY 274
+IN C R Q S+AL I + + G P++V N+LLNG+ I +A L
Sbjct: 106 MINCLCRRSQLSFALA-------ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 275 EEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWA 334
++M PD VTF +V G ++ + L+ + V G P+ Y + GLC
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 335 GRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTC 394
G D A+ M + I + ++++I + + ++A + M G+ P T
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 395 SSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNR 454
SSL+ LC GR +A LL M+E+ N V F L+D + + G LI A+ L++E+ +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 455 RKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNE 514
R I P+ V +++ ING +DEA +F M +P+ YN+LI GFC K+ +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 515 ALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIG 574
++L R+M ++GL+ + T+ +I+GF + A F M G+ P+I+TYNTL+
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 575 GYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVP 634
G CK + +A + + ++PDI TYNI G C K+ + L G+ P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 635 NTVTYNTLMNGVCCDIL-DRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWG 693
+ + YNT+++G C L + A + K+ + +P+ T N L+ + G +
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 694 QKLSEISFDFDETSYKIMDRAYHNIQENAEFFQETS 729
+++ F D ++Y ++ H+ + + F + S
Sbjct: 579 KEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 226 bits (575), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 7/483 (1%)
Query: 124 MEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILG 183
+ IL +M ++G PS + L L M+ +G +P TF L+ G
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 184 FCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQ 243
++ +L+ M C D Y +IN C RG+ AL + + ++
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN-------LLNKME 232
Query: 244 EEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGME 303
+ + +VV+Y+ +++ K R +D A L+ EM ++ I PD T++ ++S C YG
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 304 DGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSII 363
D RLL D+ + PN ++ + G+L EA + F++M ++ I P+I +NS+I
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 364 AAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFP 423
+ + A + + +M P T ++L+ G CK ++ + +L M +G
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 424 INKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGV 483
N V +T L+ G+F+ D AQ ++ ++ + P+ + ++ ++GL K G +++A V
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 484 FLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCK 543
F + + P+ + YN + G C GK+ + L + KG+ PD +N +I+GFCK
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 544 QGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITT 603
+G + A F+ M G +PD TYNTLI + + D + EL+ +M + D +T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 604 YNI 606
Y +
Sbjct: 593 YGL 595
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 222/470 (47%), Gaps = 7/470 (1%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+G L++LL+G+ +E + ++ +M E+G P T L L +
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P T+ A+I G C+ G + +LL+ M K AD Y+ +I++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C AL +F + +G+ P+V Y++L++ A+ L +M
Sbjct: 251 CKYRHVDDALN-------LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
R I P+ VTFN ++ K G + + ++L ++ + PN Y+ + G C RLDE
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A + F M K P + +N++I + +A + E ++ M + GL ++ T ++L+
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
G + A + +M+ G N + + LLDG + G L A ++ L + K+ P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D ++ G+ KAG V++ + +F +S G P+ AYN++I+GFC +G EA L
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTY 569
+M++ G LPD+ T+N +I + G + + +M D TY
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 8/238 (3%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + L++G+ + + + ME+ M G++ + T L + D + +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+ M+ G P+ T+N L+ G C+NG + + + K D + YNI+ C
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-- 496
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
GK G +F + +G+ P+V+ YN +++G+ K ++A L+ +M+
Sbjct: 497 -----KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD+ T+N ++ H + G L++++ + + Y + V + GRLD+
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL-VTDMLHDGRLDKG 608
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 4/230 (1%)
Query: 511 KLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYN 570
KL+EA+ L EM + P F+ +++ K + I M G+ ++ TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 571 TLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSA 630
+I C+ + A ++ KM G P I T N ++G+C+ ++++A ++D++V
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 631 GIVPNTVTYNTLMNGV-CCDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKT 689
G P+TVT+ TL++G+ + A+ + +++ P++VT +++ CK+G P+
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 690 LLWGQKLSEISFDFDETSYK-IMDR--AYHNIQENAEFFQETSEKSLFLD 736
L K+ + + D Y ++D Y ++ + F E K + D
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 580 LDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTY 639
L + A +L +M P I ++ + ++K + +++ G+ N TY
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 640 NTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSE 698
N ++N +C L A+ I K++K+ + P++VT N LL+ FC + + ++ E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 699 ISFDFDETSYKIM 711
+ + D ++ +
Sbjct: 164 MGYQPDTVTFTTL 176
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/517 (29%), Positives = 256/517 (49%), Gaps = 9/517 (1%)
Query: 159 WKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINA 218
++LF M+ G TFN L+ C+ G ++ E LL + K + + F YN+ I
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 219 YCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMR 278
C RG+ GA RM+ +I E+G P+V+ YN L+ G K +A + +M
Sbjct: 261 LCQRGELD------GAVRMVGCLI-EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 279 SRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLD 338
+ + PD+ T+N +++G+CK G ++ +R++ D +G +P+ Y + GLC G +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 339 EAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLL 398
A+ F + KGI P++ +N++I S G+ A + M + GL P T + L+
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 399 VGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIF 458
GLCK G + +A L+ MI KG+ + F +L+ GY + A + + + +
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 459 PDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKL 518
PD +++ +NGL K ++ + M G PN F +N L+ C KL+EAL L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 519 EREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIV-TYNTLIGGYC 577
EM+ K + PD TF +I+GFCK G + A F M V TYN +I +
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 578 KALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTV 637
+ L++ A++L +M L PD TY + + G+C +N L E++ G +P+
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 638 TYNTLMNGVCC-DILDRAIIIAAKLLKMAFVPNVVTT 673
T ++N +C D + A I ++++ VP V T
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 241/547 (44%), Gaps = 40/547 (7%)
Query: 230 GKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTF 289
GK +F+ + P V YNA+++ V + DQA+ +Y MR R I PD +F
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 290 NIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAG------------------- 330
I + CK RLL ++S G N Y V G
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 331 ----------------LCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEEN 374
LC G + E + + + ++G+ P++F +N I + G +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 375 AFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLD 434
A + + G P T ++L+ GLCK + EA L KM+ +G + + L+
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 435 GYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVP 494
GY + G + A+ + + PD + + I+GL G + A +F E G P
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 495 NNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAF 554
N YN+LI G N+G + EA +L EM +KGL+P+ TFNI++NG CK G + A
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 555 MDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNI 614
M G PDI T+N LI GY L + A E+++ M G+DPD+ TYN ++G C
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 615 RKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTT 673
K +V G PN T+N L+ +C LD A+ + ++ + P+ VT
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 674 NVLLSHFCKQGMPEKTLLWGQKLSEI-SFDFDETSYKIMDRAYH---NIQENAEFFQETS 729
L+ FCK G + +K+ E +Y I+ A+ N+ + FQE
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 730 EKSLFLD 736
++ L D
Sbjct: 630 DRCLGPD 636
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 250/528 (47%), Gaps = 17/528 (3%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
E ++L ++ + G++P+ + + L + G+ ++ +I GP+P T+N LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDM 241
G C+N + E L M D + YN LI YC G A R++ D
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA------ERIVGDA 347
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
+ G P+ Y +L++G + ++A L+ E + I P+ + +N ++ G G
Sbjct: 348 VFN-GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
+ + +L ++S GL+P ++I V GLC G + +A + M KG P IF FN
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I YS ENA E +M G+ P T +SLL GLCK + + + M+EKG
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
N F +LL+ R L A L E+ + + PDAV F I+G K G +D AY
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 482 GVFLEMSRIGFVPNNF-AYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIING 540
+F +M V ++ YN +I F + + A KL +EM + L PD +T+ ++++G
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 541 FCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPD 600
FCK G + ++M G +P + T +I C + A ++++M GL P+
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Query: 601 ITTYNIRMHGYCNIRKMNQAA--MMLDELVSAGIVPNTVTYNTLMNGV 646
++ C++ K AA ++L++L+ + Y L +G+
Sbjct: 707 A------VNTICDVDKKEVAAPKLVLEDLLKKSCI-TYYAYELLFDGL 747
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ L+ G M E ++ M E G++P IL L ++G L + MI
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
G P +TFN LI G+ + +L VM D + YN L+N C +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAV 287
+ + + E+G +PN+ +N LL + R +D+A L EEM+++ + PDAV
Sbjct: 515 VM-------ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 288 TFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCT-LYDITVAGLCWAGRLDEAMEFFED 346
TF ++ G CK G ++ L R + + + + T Y+I + + A + F++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGR 406
M ++ + P + + ++ + + G ++ M + G PS T ++ LC + R
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 407 LPEAWDLLCKMIEKGF 422
+ EA ++ +M++KG
Sbjct: 688 VYEAAGIIHRMVQKGL 703
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + L+HGY +EIL M + G+ P L L + + V + +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+ M+ G P+ +TFN L+ CR + LL M D + LI+ +C
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G GA + M + +S + YN +++ + + ++ A L++EM R +
Sbjct: 580 GDLD------GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
PD T+ ++V G CK G + G + L ++ +G +P+ T + LC R+ EA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 343 FFEDMFEKGISPSIFAFNSI 362
M +KG+ P A N+I
Sbjct: 694 IIHRMVQKGLVPE--AVNTI 711
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 269/584 (46%), Gaps = 35/584 (5%)
Query: 127 LYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCR 186
L R R PS +L +S ++ V L++DM+ G P YTFN LI C
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 187 NGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEG 246
+ C+ L M + C + F + IL+ YC G T G + + ++ G
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD-------KGLELLNAMESFG 212
Query: 247 LSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGD 306
+ PN V+YN +++ + + D + + E+MR + PD VTFN +S CK G + D
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 307 RLLRDLSVSGLL----PNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
R+ D+ + L PN Y++ + G C G L++A FE + E S+ ++N
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
+ R G A K M G+ PS + + L+ GLCK G L +A ++ M G
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
+ V + LL GY +G + A+SL E+ R P+A + ++ L K G + EA
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKG---------------- 526
+ +M+ G+ + N ++ G C G+L++A+++ + MR G
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 527 -------LLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKA 579
LPD T++ ++NG CK GR A + F +M L PD V YN I +CK
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 580 LDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTY 639
I A ++ M G + TYN + G ++ + ++DE+ GI PN TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 640 NTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCK 682
NT + +C + ++ A + ++++ PNV + L+ FCK
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 268/558 (48%), Gaps = 35/558 (6%)
Query: 118 EMSAEVMEILYR-MREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYT 176
E E + LY+ M GI P +L ++L + +LF +M G +P+ +T
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 177 FNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGR 236
F L+ G+C+ G G LL+ M + + + YN +++++C G+ + +
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND------DSEK 238
Query: 237 MIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI----APDAVTFNII 292
M+ M +EEGL P++V +N+ ++ K + A+ ++ +M + P+++T+N++
Sbjct: 239 MVEKM-REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 293 VSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGI 352
+ G CK G +ED L + + L + Y+I + GL G+ EA + M +KGI
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 353 SPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWD 412
PSI+++N ++ + G+ +A +M + G+ P + T LL G C G++ A
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 413 LLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLS 472
LL +M+ N +LL +++G + A+ L ++N + D V + ++GL
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 473 KAGLVDEAYGVFLEM-------------SRIGFV----------PNNFAYNSLIAGFCNR 509
+G +D+A + M S IG V P+ Y++L+ G C
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 510 GKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTY 569
G+ EA L EM + L PD+ +NI I+ FCKQG++ A DM + G + TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 570 NTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVS 629
N+LI G I L+++M G+ P+I TYN + C K+ A +LDE++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 630 AGIVPNTVTYNTLMNGVC 647
I PN ++ L+ C
Sbjct: 658 KNIAPNVFSFKYLIEAFC 675
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 225/446 (50%), Gaps = 21/446 (4%)
Query: 246 GLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDG 305
G++P +N L+ + +D A L++EM + P+ TF I+V G+CK G + G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 306 DRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAA 365
LL + G+LPN +Y+ V+ C GR D++ + E M E+G+ P I FNS I+A
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 366 YSRAGLEENA---FEAYKIMHQFGLT-PSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+ G +A F ++ GL P+S T + +L G CK G L +A L + E
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
+ ++ + L G R G I A+++ ++ + I P +++ ++GL K G++ +A
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
+ M R G P+ Y L+ G+C+ GK++ A L +EM + LP+ +T NI+++
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDI 601
K GR+ A + M G D VT N ++ G C + ++ +A E+V M
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM--------- 492
Query: 602 TTYNIRMHGYCNIRKMNQAAMML--DELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIA 658
R+HG + + + + L D L+ +P+ +TY+TL+NG+C A +
Sbjct: 493 -----RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 659 AKLLKMAFVPNVVTTNVLLSHFCKQG 684
A+++ P+ V N+ + HFCKQG
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQG 573
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/585 (22%), Positives = 264/585 (45%), Gaps = 36/585 (6%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L+ GY + ++ + +E+L M G++P++ + S R G K+ M G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 170 PRPSNYTFNALILGFCRNGCIRIGESLLHVMH--KYMCVA--DFFAYNILINAYCIRGQT 225
P TFN+ I C+ G + + M +Y+ + + YN+++ +C G
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
A + +F+ I+E ++ YN L G V+ +A + ++M + I P
Sbjct: 308 EDA-------KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
++NI++ G CK G + D ++ + +G+ P+ Y + G C G++D A +
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
+M P+ + N ++ + + G A E + M++ G + TC+ ++ GLC G
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 406 RLPEAWDLLCKM-----------------------IEKGFPINKVAFTVLLDGYFRIGDL 442
L +A +++ M IE + + ++ LL+G + G
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540
Query: 443 IGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSL 502
A++L+ E+ K+ PD+VA++ +I+ K G + A+ V +M + G + YNSL
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 503 IAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGL 562
I G + ++ E L EM++KG+ P+ T+N I C+ +++ A + +M + +
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 563 VPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAM 622
P++ ++ LI +CK D A E+ + + Y++ + ++ +A
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE-GLYSLMFNELLAAGQLLKATE 719
Query: 623 MLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAF 666
+L+ ++ G T Y L+ +C D L+ A I K++ +
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 142/600 (23%), Positives = 248/600 (41%), Gaps = 71/600 (11%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+ + ++ + R + + +++ +MRE G++P +L + G ++F DM
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 166 I---HLG-PRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCI 221
+LG PRP++ T+N ++ GFC+ G + ++L + + +A +YNI +
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 222 RGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRD 281
G+ A + + ++G+ P++ YN L++G K + A + M+
Sbjct: 339 HGKFIEA-------ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 282 IAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAM 341
+ PDAVT+ ++ G+C G ++ LL+++ + LPN +I + L GR+ EA
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 342 EFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLT------------- 388
E M EKG N I+ +G + A E K M G
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 389 ----------PSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFR 438
P T S+LL GLCK GR EA +L +M+ + + VA+ + + + +
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571
Query: 439 IGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFA 498
G + A + ++ ++ +++ I GL + E +G+ EM G PN
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631
Query: 499 YNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCK--------------- 543
YN+ I C K+ +A L EM QK + P+ F+F +I FCK
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
Query: 544 -------------------QGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVR 584
G++ A + + G Y L+ CK ++
Sbjct: 692 SICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEV 751
Query: 585 ADELVNKMY--AGGLDPDITTYNIRMHGYC-NIRKMNQAAMMLDELVSAGIVPNTVTYNT 641
A +++KM G DP I G N ++ N A + E+ S G V N V N
Sbjct: 752 ASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 129/350 (36%), Gaps = 78/350 (22%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D LL+G + AE + M + P A I + G S +++
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+DM G S T+N+LILG I + I
Sbjct: 583 KDMEKKGCHKSLETYNSLILGL----------------------------GIKNQIFEIH 614
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G + D ++E+G+SPN+ YN + + ++ A L +EM ++I
Sbjct: 615 G--------------LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
AP+ +F ++ CK + + + +VS LY + L AG+L +A E
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATE 719
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
E + ++G F + ++ + LC
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVES-----------------------------------LC 744
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNEL 452
KK L A +L KMI++G+ + A ++DG ++G+ A S +++
Sbjct: 745 KKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 599 PDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIII 657
P + YN+ + R++ + + ++V GI P T T+N L+ +C +D A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 658 AAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTL 690
++ + PN T +L+ +CK G+ +K L
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 168/610 (27%), Positives = 293/610 (48%), Gaps = 67/610 (10%)
Query: 126 ILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL-GPRPSNYTFNALILGF 184
+L +M++ GI+ ES + + + G G +L +M ++ P+ ++N ++
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 185 CRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQE 244
C ++ ++ + M F + +++ A+C + AL ++ DM +
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS------LLRDMTKH 246
Query: 245 EGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMED 304
G PN V+Y L++ K +++A L EEM PDA TFN ++ G CK+ + +
Sbjct: 247 -GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305
Query: 305 GDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIA 364
+++ + + G P+ Y + GLC GR+D A +D+F + P I FN++I
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIH 361
Query: 365 AYSRAGLEENAFEAYKIM-HQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFP 423
+ G ++A M +G+ P CT +SL+ G K+G + A ++L M KG
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 424 INKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGV 483
N ++T+L+DG+ ++G + A ++ NE++ + P+ V F+ I+ K + EA +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 484 FLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCK 543
F EM R G P+ + +NSLI+G C ++ AL L R+M +G++ + T+N +IN F +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 544 QGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGG------- 596
+G +K A +M G D +TYN+LI G C+A ++ +A L KM G
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 597 ----------------------------LDPDITTYNIRMHGYCNIRKMNQAAMMLDELV 628
PDI T+N ++G C ++ M +L
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 629 SAGIVPNTVTYNTLMNGVC--------CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHF 680
+ GI P+TVT+NTLM+ +C C +LD I + FVPN T ++LL
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI-------EDGFVPNHRTWSILLQSI 714
Query: 681 CKQGMPEKTL 690
+P++TL
Sbjct: 715 ----IPQETL 720
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 235/468 (50%), Gaps = 10/468 (2%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+ L+H + E +++L M +G +P + L + K+ M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
+ G P + T+ L+ G C+ G + + L + + K + +N LI+ + G+
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRL 369
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
A ++ DM+ G+ P+V YN+L+ GY K + A + +MR++ P+
Sbjct: 370 D------DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
++ I+V G CK G +++ +L ++S GL PN ++ ++ C R+ EA+E F
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
+M KG P ++ FNS+I+ ++A + M G+ ++ T ++L+ ++G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
+ EA L+ +M+ +G P++++ + L+ G R G++ A+SL+ ++ R P ++ +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
INGL ++G+V+EA EM G P+ +NSLI G C G++ + L + R+++ +
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI 573
G+ PD TFN +++ CK G + A + G VP+ T++ L+
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D ++L+ G V+ + +L M G++ + L + LR G+ KL
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+M+ G T+N+LI G CR G + SL M + + NILIN C
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 223 GQTSYALGKCGAGRMIFDMIQEE----GLSPNVVVYNALLNGYVKARDIDQANMLYEEMR 278
G A+ Q+E G +P++V +N+L+NG +A I+ ++ +++
Sbjct: 613 GMVEEAVE-----------FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 279 SRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLD 338
+ I PD VTFN ++S CK G + D LL + G +PN + I + + LD
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 234/484 (48%), Gaps = 8/484 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF DM+ P PS F+ L+ + + SL M + + Y+I IN +C
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q S AL I + + G P++V N+LLNG+ I +A L ++M
Sbjct: 122 RRSQLSLALA-------ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD VTF +V G ++ + L+ + V G P+ Y + GLC G D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ M + I + +N+II + ++AF+ + M G+ P T + L+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRK-IFP 459
LC GR +A LL M+EK + V F L+D + + G L+ A+ L++E+ + K FP
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D VA++ I G K V+E VF EMS+ G V N Y +LI GF + A +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKA 579
++M G+ PD T+NI+++G C G ++ A+ F M + + DIVTY T+I CKA
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 580 LDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTY 639
+ +L + G+ P++ TY M G+C +A + E+ G +PN+ TY
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 640 NTLM 643
NTL+
Sbjct: 535 NTLI 538
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 230/488 (47%), Gaps = 14/488 (2%)
Query: 123 VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALIL 182
V+ + +M+ +GI + +I R + M+ LG PS T N+L+
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN 153
Query: 183 GFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
GFC I +L+ M + D + L++ + S A+ RM+
Sbjct: 154 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL--VERMVV--- 208
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGM 302
+G P++V Y A++NG K + D A L +M I D V +N I+ G CKY M
Sbjct: 209 --KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
+D L + G+ P+ Y+ ++ LC GR +A DM EK I+P + FN++
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 363 IAAYSRAGLEENAFEAYKIM----HQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMI 418
I A+ + G A + Y M H F P ++L+ G CK R+ E ++ +M
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCF---PDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 419 EKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVD 478
++G N V +T L+ G+F+ D AQ ++ ++ + PD + ++ ++GL G V+
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 479 EAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIII 538
A VF M + + Y ++I C GK+ + L + KG+ P+ T+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 539 NGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLD 598
+GFC++G + A F++M G +P+ TYNTLI + D + EL+ +M + G
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 599 PDITTYNI 606
D +T+ +
Sbjct: 564 GDASTFGL 571
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 213/488 (43%), Gaps = 70/488 (14%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+G L++LL+G+ +E + ++ +M E+G P T L L +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P T+ A+I G C+ G + +LL+ M K AD YN +I+
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 220 CIRGQ---------------------TSYALGKC--------GAGRMIFDMIQEEGLSPN 250
C T L C A R++ DM+ E+ ++P+
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKNINPD 319
Query: 251 VVVYNALLNGYVKARDIDQANMLYEEM-RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLL 309
+V +NAL++ +VK + +A LY+EM +S+ PD V +N ++ G CKY +E+G +
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 310 RDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRA 369
R++S GL+ N Y + G A D A F+ M G+ P I +N ++
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 370 GLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAF 429
G E A ++ M + + T ++++ LCK G++ + WDL C + KG N V +
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 430 TVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSR 489
T ++ G+ R GL +EA +F+EM
Sbjct: 500 TTMMSGFCR-----------------------------------KGLKEEADALFVEMKE 524
Query: 490 IGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKP 549
G +PN+ YN+LI G + +L +EMR G D TF ++ N GR+
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN-MLHDGRLDK 583
Query: 550 AIDAFMDM 557
+F+DM
Sbjct: 584 ---SFLDM 588
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 197/415 (47%), Gaps = 2/415 (0%)
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
++D L D+ S P+ + ++ + + D + E M GIS +++ ++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
I + R A M + G PS T +SLL G C R+ EA L+ +M+E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
+ + V FT L+ G F+ A +L + + PD V + A INGL K G D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
+ +M + + YN++I G C +++A L +M KG+ PD FT+N +I+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMY-AGGLDPD 600
C GR A DM + PD+V +N LI + K +V A++L ++M + PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 601 ITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG-VCCDILDRAIIIAA 659
+ YN + G+C +++ + + E+ G+V NTVTY TL++G D A ++
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 660 KLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRA 714
+++ P+++T N+LL C G E L+ + + + D +Y M A
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/591 (26%), Positives = 292/591 (49%), Gaps = 20/591 (3%)
Query: 109 ALLHGYLRVEMSAEVM--EILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMI 166
+LL Y+R ++ + +L+ + PS++ I + L G ++F+ MI
Sbjct: 99 SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMI 158
Query: 167 HLGPRPSNYTFNALILGFCR---NGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRG 223
L +P+ T N L++G R + I + M K + +N+L+N YC+ G
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG 218
Query: 224 QTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIA 283
+ ALG M+ M+ E ++P+ V YN +L K + L +M+ +
Sbjct: 219 KLEDALG------MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV 272
Query: 284 PDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEF 343
P+ VT+N +V G+CK G +++ +++ + + +LP+ Y+I + GLC AG + E +E
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 344 FEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQF---GLTPSSCTCSSLLVG 400
+ M + P + +N++I GL + EA K+M Q G+ + T + L
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGL---SLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 401 LCKKGRLPEAWDLLCKMIE-KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
LCK+ + + ++++ GF + V + L+ Y ++GDL GA + E+ ++ I
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
+ + + ++ L K +DEA+ + + GF+ + Y +LI GF K+ +AL++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKA 579
EM++ + P TFN +I G C G+ + A++ F ++ +GL+PD T+N++I GYCK
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 580 LDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTY 639
+ +A E N+ PD T NI ++G C +A + L+ V +TVTY
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTY 628
Query: 640 NTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKT 689
NT+++ C D L A + +++ + P+ T N +S + G +T
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 263/551 (47%), Gaps = 49/551 (8%)
Query: 96 DFHLFGSDFRVL-DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGD 154
+ HL + L D L YL ++I +M + + P+ L L+R
Sbjct: 122 NLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPS 181
Query: 155 ---YGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVM-HKYMCVADFF 210
S ++F DM+ +G + TFN L+ G+C G + +L M ++ D
Sbjct: 182 SFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Query: 211 AYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQA 270
YN ++ A +G+ S ++ DM ++ GL PN V YN L+ GY K + +A
Sbjct: 242 TYNTILKAMSKKGRLS------DLKELLLDM-KKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 271 NMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAG 330
+ E M+ ++ PD T+NI+++G C G M +G L+ + L P+ Y+ + G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 331 LCWAGRLDEAMEFFEDMFEKGI------------------------------------SP 354
G EA + E M G+ SP
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 355 SIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLL 414
I ++++I AY + G A E + M Q G+ ++ T +++L LCK+ +L EA +LL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 415 CKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKA 474
++GF +++V + L+ G+FR + A +W+E+ + KI P F++ I GL
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 475 GLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTF 534
G + A F E++ G +P++ +NS+I G+C G++ +A + E + PDN+T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 535 NIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYA 594
NI++NG CK+G + A++ F + V D VTYNT+I +CK + A +L+++M
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 595 GGLDPDITTYN 605
GL+PD TYN
Sbjct: 654 KGLEPDRFTYN 664
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 153/572 (26%), Positives = 282/572 (49%), Gaps = 25/572 (4%)
Query: 179 ALILGFCR--NGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGR 236
+L++ + R + + + SLLH ++I ++AY G+ AL
Sbjct: 99 SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVAL------- 151
Query: 237 MIFDMIQEEGLSPNVVVYNALLNGYVK---ARDIDQANMLYEEMRSRDIAPDAVTFNIIV 293
IF + L PN++ N LL G V+ + I A ++++M ++ + TFN++V
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 294 SGHCKYGGMEDG----DRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFE 349
+G+C G +ED +R++ + V+ P+ Y+ + + GRL + E DM +
Sbjct: 212 NGYCLEGKLEDALGMLERMVSEFKVN---PDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 350 KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
G+ P+ +N+++ Y + G + AF+ ++M Q + P CT + L+ GLC G + E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
+L+ M + V + L+DG F +G + A+ L ++ + + V + +
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 470 GLSKAGLVDEAYGVFLEMSRI-GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
L K + E+ + GF P+ Y++LI + G L+ AL++ REM QKG+
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 529 PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADEL 588
+ T N I++ CK+ ++ A + ++ G + D VTY TLI G+ + + +A E+
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 589 VNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC 648
++M + P ++T+N + G C+ K A DEL +G++P+ T+N+++ G C
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 649 D-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETS 707
+ +++A + +K +F P+ T N+LL+ CK+GM EK L + L E + D +
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVT 627
Query: 708 YKIMDRAY---HNIQENAEFFQETSEKSLFLD 736
Y M A+ ++E + E EK L D
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 212/468 (45%), Gaps = 42/468 (8%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L++GY ++ E +I+ M++ ++P IL L G +L M L
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 170 PRPSNYTFNALILGFCRNGCIRIGESL-----LHVMHKYMCVADFFAYNILINAYCIRGQ 224
+P T+N LI +GC +G SL + M A+ +NI + C +
Sbjct: 341 LQPDVVTYNTLI-----DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Query: 225 TSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAP 284
+ R + +++ G SP++V Y+ L+ Y+K D+ A + EM + I
Sbjct: 396 ------REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 285 DAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFF 344
+ +T N I+ CK +++ LL G + + Y + G ++++A+E +
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 345 EDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKK 404
++M + I+P++ FNS+I G E A E + + + GL P T +S+++G CK+
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 405 GRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNEL-NRRKIFPDAVA 463
GR+ +A++ + I+ F + +LL+G + G A + +N L R++ D V
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVT 627
Query: 464 FSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA-------- 515
++ I+ K + EAY + EM G P+ F YNS I+ GKL+E
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687
Query: 516 ---------LKLEREMR------QKGLLPDNFTFNIIINGFCKQGRMK 548
L++E E ++ L + ++ +I+ C +GR+K
Sbjct: 688 GKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 263/552 (47%), Gaps = 8/552 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LFRDMIH P P+ F+ L + + +L M + + +I+IN +C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
+ A G I + G PN + ++ L+NG + +A L + M
Sbjct: 135 RCRKLCLAFSAMGK-------IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD +T N +V+G C G + L+ + G PN Y + +C +G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
ME M E+ I ++ II + G +NAF + M G+T + T + L+ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
C GR + LL MI++ N V F+VL+D + + G L A+ L E+ R I PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+ +++ I+G K +D+A + M G PN +N LI G+C ++++ L+L R
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
+M +G++ D T+N +I GFC+ G++ A + F +M + P+IVTY L+ G C
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A E+ K+ ++ DI YNI +HG CN K++ A + L G+ P TYN
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 641 TLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
++ G+C L A ++ K+ + P+ T N+L+ G K++ ++L
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 700 SFDFDETSYKIM 711
F D ++ K++
Sbjct: 608 GFSVDASTIKMV 619
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 253/522 (48%), Gaps = 7/522 (1%)
Query: 123 VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALIL 182
V+ + +M GI + ++I+ R + +I LG P+ TF+ LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166
Query: 183 GFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
G C G + L+ M + D N L+N C+ G+ + A+ ++ D +
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM-------LLIDKM 219
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGM 302
E G PN V Y +LN K+ A L +M R+I DAV ++II+ G CK+G +
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
++ L ++ + G+ N Y+I + G C AGR D+ + DM ++ I+P++ F+ +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
I ++ + G A E +K M G+ P + T +SL+ G CK+ L +A ++ M+ KG
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
N F +L++GY + + L+ +++ R + D V ++ I G + G ++ A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
+F EM PN Y L+ G C+ G+ +AL++ ++ + + D +NIII+G C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 543 KQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDIT 602
++ A D F + G+ P + TYN +IGG CK + A+ L KM G PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 603 TYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
TYNI + + ++ +++EL G + T +++
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 244/512 (47%), Gaps = 37/512 (7%)
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
DMI L P V+ ++ L + K + D L ++M + IA + T +I+++ C+
Sbjct: 78 DMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 136
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
+ + + G PN + + GLC GR+ EA+E + M E G P +
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
N+++ +G E A M ++G P++ T +L +CK G+ A +LL KM E
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
+ ++ V +++++DG + G L A +L+NE+ + I + + ++ I G AG D+
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
+ +M + PN ++ LI F GKL EA +L +EM +G+ PD T+ +I+
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
GFCK+ + A M G P+I T+N LI GYCKA I EL KM G+
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC------------ 647
D TYN + G+C + K+N A + E+VS + PN VTY L++G+C
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 648 ---------CDILDRAIII-----AAKL---------LKMAFV-PNVVTTNVLLSHFCKQ 683
DI III A+K+ L + V P V T N+++ CK+
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 684 GMPEKTLLWGQKLSEISFDFDETSYKIMDRAY 715
G + L +K+ E D +Y I+ RA+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 248/531 (46%), Gaps = 9/531 (1%)
Query: 75 TWVISRIGAGRSKHMVEFMCDDFHLFG--SDFRVLDALLHGYLRVEMSAEVMEILYRMRE 132
+ + S I + +V +C L G + L +++ + R + ++ +
Sbjct: 92 SRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK 151
Query: 133 VGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRI 192
+G P+ + L L G +L M+ +G +P T N L+ G C +G
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 193 GESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVV 252
L+ M +Y C + Y ++N C GQT+ A+ + ++E + + V
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME-------LLRKMEERNIKLDAV 264
Query: 253 VYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDL 312
Y+ +++G K +D A L+ EM + I + +T+NI++ G C G +DG +LLRD+
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 313 SVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLE 372
+ PN + + + G+L EA E ++M +GI+P + S+I + +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 373 ENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVL 432
+ A + +M G P+ T + L+ G CK R+ + +L KM +G + V + L
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 433 LDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGF 492
+ G+ +G L A+ L+ E+ RK+ P+ V + ++GL G ++A +F ++ +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 493 VPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAID 552
+ YN +I G CN K+++A L + KG+ P T+NI+I G CK+G + A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 553 AFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITT 603
F M G PD TYN LI + D ++ +L+ ++ G D +T
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 211/445 (47%), Gaps = 36/445 (8%)
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
+D L RD+ S LP + + + + D + + M KGI+ +++ + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
I + R AF A + + G P++ T S+L+ GLC +GR+ EA +L+ +M+E G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
+ + L++G G A L +++ P+AV + +N + K+G A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
+ +M + Y+ +I G C G L+ A L EM KG+ + T+NI+I GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 543 -----------------------------------KQGRMKPAIDAFMDMYRTGLVPDIV 567
K+G+++ A + +M G+ PD +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 568 TYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDEL 627
TY +LI G+CK + +A+++V+ M + G DP+I T+NI ++GYC +++ + ++
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 628 VSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMP 686
G+V +TVTYNTL+ G C L+ A + +++ PN+VT +LL C G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 687 EKTLLWGQKLSEISFDFDETSYKIM 711
EK L +K+ + + D Y I+
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNII 514
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 197/396 (49%), Gaps = 4/396 (1%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+ D+A++ F DM P++ F+ + +A ++ + K M G+ + T S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
++ C+ +L A+ + K+I+ G+ N + F+ L++G G + A L + +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
PD + + +NGL +G EA + +M G PN Y ++ C G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
++L R+M ++ + D ++III+G CK G + A + F +M G+ +I+TYN LIGG
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
+C A +L+ M ++P++ T+++ + + K+ +A + E++ GI P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 636 TVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
T+TY +L++G C + LD+A + ++ PN+ T N+L++ +CK + L +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 695 KLSEISFDFDETSYKIMDRAYHNIQE---NAEFFQE 727
K+S D +Y + + + + + E FQE
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 177/392 (45%), Gaps = 42/392 (10%)
Query: 120 SAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNA 179
+A ME+L +M E I +I+ L + G + + LF +M G + T+N
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 180 LILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIF 239
LI GFC G G LL M K + +++LI+++ G+ A +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA------EELHK 357
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
+MI G++P+ + Y +L++G+ K +D+AN + + M S+ P+ TFNI+++G+CK
Sbjct: 358 EMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
++DG L R +S+ G++ + Y+ + G C G+L+ A E F++M + + P+I +
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 360 NSIIAAYSRAGLEENAFEAYK----------------IMHQF------------------ 385
++ G E A E ++ I+H
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 386 -GLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIG 444
G+ P T + ++ GLCKKG L EA L KM E G + + +L+ + GD
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 445 AQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
+ L EL R DA I+ LS L
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 11/312 (3%)
Query: 67 RLLAQDVVTWVI---SRIGAGRSKHMVEFMCDDFHL-FGSDFRVLDALLHGYLRVEMSAE 122
R + +VVT+ + S + G+ + E + H D +L+ G+ + +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 123 VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALIL 182
+++ M G P+ IL + +LFR M G T+N LI
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 183 GFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
GFC G + + + L M + Y IL++ C G++ AL IF+ I
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE-------IFEKI 499
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGM 302
++ + ++ +YN +++G A +D A L+ + + + P T+NI++ G CK G +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
+ + L R + G P+ Y+I + G ++++ E++ G S +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 363 IAAYSRAGLEEN 374
I S L+++
Sbjct: 620 IDMLSDGRLKKS 631
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 491 GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPA 550
F N +Y + K ++A+ L R+M LP F+ + + K +
Sbjct: 48 AFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107
Query: 551 IDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG 610
+ M G+ ++ T + +I +C+ + A + K+ G +P+ T++ ++G
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 611 YCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILD-RAIIIAAKLLKMAFVPN 669
C ++++A ++D +V G P+ +T NTL+NG+C + A+++ K+++ PN
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 670 VVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAY--HNIQENA-EFFQ 726
VT +L+ CK G + +K+ E + D Y I+ H +NA F
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 287
Query: 727 ETSEKSLFLDFLMGCMTLNV-TGDFC 751
E K + + + T N+ G FC
Sbjct: 288 EMEMKGITTNII----TYNILIGGFC 309
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 254/522 (48%), Gaps = 7/522 (1%)
Query: 123 VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALIL 182
V+++ +M GI + ++I+ R + +I LG P TF+ LI
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 183 GFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
G C G + L+ M + N L+N C+ G+ S A+ ++ D +
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV-------LLIDRM 203
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGM 302
E G PN V Y +L K+ A L +M R I DAV ++II+ G CK G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
++ L ++ + G + +Y + G C+AGR D+ + DM ++ I+P + AF+++
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
I + + G A E +K M Q G++P + T +SL+ G CK+ +L +A +L M+ KG
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
N F +L++GY + + L+ +++ R + D V ++ I G + G ++ A
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
+F EM P+ +Y L+ G C+ G+ +AL++ ++ + + D +NIII+G C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 543 KQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDIT 602
++ A D F + G+ PD+ TYN +IGG CK + AD L KM G P+
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 603 TYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
TYNI + + ++A +++E+ G + T +++
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 232 bits (591), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 260/552 (47%), Gaps = 8/552 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF++M PRP F+ L R + L M + + +I+IN C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
+ S A G I + G P+ V ++ L+NG + +A L + M
Sbjct: 119 RCRKLSLAFSAMGK-------IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
P +T N +V+G C G + D L+ + +G PN Y + +C +G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
ME M E+ I ++ II + G +NAF + M G ++L+ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
C GR + LL MI++ + VAF+ L+D + + G L A+ L E+ +R I PD
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
V +++ I+G K +D+A + M G PN +N LI G+C +++ L+L R
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
+M +G++ D T+N +I GFC+ G+++ A + F +M + PDIV+Y L+ G C
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ +A E+ K+ ++ DI YNI +HG CN K++ A + L G+ P+ TYN
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 641 TLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEI 699
++ G+C L A ++ K+ + PN T N+L+ +G K+ +++
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 700 SFDFDETSYKIM 711
F D ++ K++
Sbjct: 592 GFSVDASTVKMV 603
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 242/483 (50%), Gaps = 4/483 (0%)
Query: 237 MIFDMIQE---EGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIV 293
++ D+ ++ +G++ N+ + ++N + R + A ++ PD VTF+ ++
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 294 SGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGIS 353
+G C G + + L+ + G P + V GLC G++ +A+ + M E G
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 354 PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDL 413
P+ + ++ ++G A E + M + + + S ++ GLCK G L A++L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 414 LCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSK 473
+M KGF + + +T L+ G+ G L ++ +RKI PD VAFSA I+ K
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 474 AGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFT 533
G + EA + EM + G P+ Y SLI GFC +L++A + M KG P+ T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 534 FNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMY 593
FNI+ING+CK + ++ F M G+V D VTYNTLI G+C+ + A EL +M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 594 AGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILD 652
+ + PDI +Y I + G C+ + +A + +++ + + + YN +++G+C +D
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 653 RAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMD 712
A + L P+V T N+++ CK+G + L +K+ E + +Y I+
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 713 RAY 715
RA+
Sbjct: 570 RAH 572
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 222/474 (46%), Gaps = 7/474 (1%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+ D L++G +E +E++ RM E+G P+ + L L G
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P+ T+ ++ C++G + LL M + D Y+I+I+
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C G A +F+ ++ +G ++++Y L+ G+ A D L +M
Sbjct: 258 CKDGSLDNAFN-------LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
R I PD V F+ ++ K G + + + L +++ G+ P+ Y + G C +LD+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A + M KG P+I FN +I Y +A L ++ E ++ M G+ + T ++L+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
G C+ G+L A +L +M+ + + V++ +LLDG G+ A ++ ++ + K+
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D ++ I+G+ A VD+A+ +F + G P+ YN +I G C +G L+EA L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI 573
R+M + G P+ T+NI+I +G + ++ R G D T ++
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 200/439 (45%), Gaps = 39/439 (8%)
Query: 338 DEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
D+A++ F++M P + F+ + + +R + + K M G+ + T S +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
+ C+ +L A+ + K+I+ G+ + V F+ L++G G + A L + +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 458 FPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
P + +A +NGL G V +A + M GF PN Y ++ C G+ A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 518 LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
L R+M ++ + D ++III+G CK G + A + F +M G DI+ Y TLI G+C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 578 KA-------------------LDIV----------------RADELVNKMYAGGLDPDIT 602
A D+V A+EL +M G+ PD
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 603 TYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKL 661
TY + G+C ++++A MLD +VS G PN T+N L+NG C +++D + + K+
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 662 LKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKI-MDRAYHN--I 718
V + VT N L+ FC+ G E Q++ D SYKI +D N
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 719 QENAEFFQETSEKSLFLDF 737
++ E F++ + + LD
Sbjct: 474 EKALEIFEKIEKSKMELDI 492
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 175/392 (44%), Gaps = 42/392 (10%)
Query: 120 SAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNA 179
+A ME+L +M E I +I+ L + G + + LF +M G + +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 180 LILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIF 239
LI GFC G G LL M K D A++ LI+ + G+ A +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA------EELHK 341
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
+MIQ G+SP+ V Y +L++G+ K +D+AN + + M S+ P+ TFNI+++G+CK
Sbjct: 342 EMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
++DG L R +S+ G++ + Y+ + G C G+L+ A E F++M + + P I ++
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 360 NSIIAAYSRAGLEENAFEAYK----------------IMHQF------------------ 385
++ G E A E ++ I+H
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 386 -GLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIG 444
G+ P T + ++ GLCKKG L EA L KM E G N + +L+ + GD
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 445 AQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
+ L E+ R DA ++ LS L
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 7/335 (2%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
F +D + L+ G+ + ++L M + I P A + L ++ G
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
+L ++MI G P T+ +LI GFC+ + +L +M C + +NILIN Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C G +F + G+ + V YN L+ G+ + ++ A L++EM S
Sbjct: 398 CKANLID-------DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
R + PD V++ I++ G C G E + + S + + +Y+I + G+C A ++D+
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A + F + KG+ P + +N +I + G A ++ M + G +P+ CT + L+
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLD 434
+G ++ L+ ++ GF ++ +++D
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 7/266 (2%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
+L+ G+ + + +L M G P+ IL + +LFR M
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G T+N LI GFC G + + + L M D +Y IL++ C G+ A
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
L IF+ I++ + ++ +YN +++G A +D A L+ + + + PD T
Sbjct: 477 LE-------IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
+NI++ G CK G + + D L R + G PN Y+I + G ++ + E++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEEN 374
G S ++ S L+++
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKKS 615
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 40/244 (16%)
Query: 473 KAGLVD----EAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
++G+VD +A +F EM+R P ++ L + + + L L ++M KG+
Sbjct: 45 RSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA 104
Query: 529 PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADEL 588
+ +T +I+IN C+ ++ A A
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSA----------------------------------- 129
Query: 589 VNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC 648
+ K+ G +PD T++ ++G C ++++A ++D +V G P +T N L+NG+C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 649 D-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETS 707
+ + A+++ ++++ F PN VT +L CK G + +K+ E D
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 708 YKIM 711
Y I+
Sbjct: 250 YSII 253
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 273/565 (48%), Gaps = 34/565 (6%)
Query: 161 LFRDMIHLGPRPSNYTFNAL------------ILGFCRNGCIRIGESLLHVMHKYMCVAD 208
LF MI P P+ FN L +LGFC+ G L + H D
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK------GMELNGIEH------D 104
Query: 209 FFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDID 268
+ I+IN YC + + +A G + G P+ + ++ L+NG+ +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKL-------GYEPDTITFSTLVNGFCLEGRVS 157
Query: 269 QANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITV 328
+A L + M PD VT + +++G C G + + L+ + G P+ Y +
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 329 AGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLT 388
LC +G A++ F M E+ I S+ ++ +I + + G ++A + M G+
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 389 PSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSL 448
T SSL+ GLC G+ + +L +MI + + V F+ L+D + + G L+ A+ L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 449 WNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCN 508
+NE+ R I PD + +++ I+G K + EA +F M G P+ Y+ LI +C
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 509 RGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVT 568
++++ ++L RE+ KGL+P+ T+N ++ GFC+ G++ A + F +M G+ P +VT
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 569 YNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELV 628
Y L+ G C ++ +A E+ KM + I YNI +HG CN K++ A + L
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 629 SAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLL-SHFCKQGMP 686
G+ P+ VTYN ++ G+C L A ++ K+ + P+ T N+L+ +H G+
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 687 EKTLLWGQKLSEISFDFDETSYKIM 711
L +++ F D ++ K++
Sbjct: 578 SSVELI-EEMKVCGFSADSSTIKMV 601
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 246/501 (49%), Gaps = 14/501 (2%)
Query: 156 GSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNIL 215
G WKL G P TF+ L+ GFC G + +L+ M + D + L
Sbjct: 129 GRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 181
Query: 216 INAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYE 275
IN C++G+ S AL ++ D + E G P+ V Y +LN K+ + A L+
Sbjct: 182 INGLCLKGRVSEAL-------VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 276 EMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAG 335
+M R+I V ++I++ CK G +D L ++ + G+ + Y + GLC G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+ D+ + +M + I P + F+++I + + G A E Y M G+ P + T +
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
SL+ G CK+ L EA + M+ KG + V +++L++ Y + + L+ E++ +
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
+ P+ + ++ + G ++G ++ A +F EM G P+ Y L+ G C+ G+LN+A
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
L++ +M++ + +NIII+G C ++ A F + G+ PD+VTYN +IGG
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
CK + AD L KM G PD TYNI + + + + +++E+ G +
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 636 TVTYNTLMNGVCCDILDRAII 656
+ T +++ + LD++ +
Sbjct: 595 SSTIKMVIDMLSDRRLDKSFL 615
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 240/529 (45%), Gaps = 13/529 (2%)
Query: 79 SRIGAGRSKHMVEFMCDDFHLFG--SDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIM 136
S + + +V C L G D + +++ Y R + +L R ++G
Sbjct: 78 SAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYE 137
Query: 137 PSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESL 196
P + L G L M+ + RP T + LI G C G R+ E+L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG--RVSEAL 195
Query: 197 LHV--MHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVY 254
+ + M +Y D Y ++N C G ++ AL +F ++E + +VV Y
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD-------LFRKMEERNIKASVVQY 248
Query: 255 NALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSV 314
+ +++ K D A L+ EM + I D VT++ ++ G C G +DG ++LR++
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 315 SGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEEN 374
++P+ + + G+L EA E + +M +GI+P +NS+I + +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 375 AFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLD 434
A + + +M G P T S L+ CK R+ + L ++ KG N + + L+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 435 GYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVP 494
G+ + G L A+ L+ E+ R + P V + ++GL G +++A +F +M +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 495 NNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAF 554
YN +I G CN K+++A L + KG+ PD T+N++I G CK+G + A F
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 555 MDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITT 603
M G PD TYN LI + ++ + EL+ +M G D +T
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 208/437 (47%), Gaps = 7/437 (1%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D + L++G +E + ++ RM E G P E + L + G+ LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
R M + S ++ +I C++G SL + M AD Y+ LI C
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G+ +M+ +MI + P+VV ++AL++ +VK + +A LY EM +R I
Sbjct: 294 GKWD------DGAKMLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
APD +T+N ++ G CK + + +++ + G P+ Y I + C A R+D+ M
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
F ++ KG+ P+ +N+++ + ++G A E ++ M G+ PS T LL GLC
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
G L +A ++ KM + + + +++ G + A SL+ L+ + + PD V
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM 522
++ I GL K G + EA +F +M G P++F YN LI L +++L EM
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 523 RQKGLLPDNFTFNIIIN 539
+ G D+ T ++I+
Sbjct: 587 KVCGFSADSSTIKMVID 603
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 177/384 (46%), Gaps = 1/384 (0%)
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
+ D L + S LP ++ + + + D + F + M GI ++
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I Y R AF + G P + T S+L+ G C +GR+ EA L+ +M+E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
+ V + L++G G + A L + + PD V + +N L K+G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
+F +M + Y+ +I C G ++AL L EM KG+ D T++ +I G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDI 601
C G+ +M ++PD+VT++ LI + K ++ A EL N+M G+ PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 602 TTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAK 660
TYN + G+C +++A M D +VS G P+ VTY+ L+N C +D + + +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 661 LLKMAFVPNVVTTNVLLSHFCKQG 684
+ +PN +T N L+ FC+ G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSG 434
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
++L+ G+ + E ++ M G P +IL S + +LFR++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
G P+ T+N L+LGFC++G + + L M Y IL++ C G+ +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAV 287
AL IF+ +Q+ ++ + +YN +++G A +D A L+ + + + PD V
Sbjct: 474 ALE-------IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 288 TFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDM 347
T+N+++ G CK G + + D L R + G P+ Y+I + L ++E E+M
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 348 FEKGISPSIFAFNSIIAAYSRAGLEEN 374
G S +I S L+++
Sbjct: 587 KVCGFSADSSTIKMVIDMLSDRRLDKS 613
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 162/632 (25%), Positives = 276/632 (43%), Gaps = 83/632 (13%)
Query: 134 GIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIG 193
G++P + +L L ++ L +M LG N+T++ LI G +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 194 ESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVV 253
+ L+H M + + Y+ I C+ + G + +FD + GL P
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCI---CVMSKE----GVMEKAKALFDGMIASGLIPQAQA 384
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLS 313
Y +L+ GY + +++ Q L EM+ R+I T+ +V G C G ++ +++++
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 314 VSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
SG PN +Y + R +AM ++M E+GI+P IF +N
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN------------- 491
Query: 374 NAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLL 433
SL++GL K R+ EA L +M+E G N + +
Sbjct: 492 ----------------------SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFV 493
GY + A E+ + P+ V + IN K G V EA + M G +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 494 PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
+ Y L+ G K+++A ++ REMR KG+ PD F++ ++INGF K G M+ A
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 554 FMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCN 613
F +M GL P+++ YN L+GG+C++ +I +A EL+++M GL P+ TY + GYC
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 614 IRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDI--LDRAIIIAA------------ 659
+ +A + DE+ G+VP++ Y TL++G CC + ++RAI I
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG-CCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 660 ----------------------KLLKMAF----VPNVVTTNVLLSHFCKQGMPEKTLLWG 693
+L+ +F PN VT N+++ + CK+G E
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 694 QKLSEISFDFDETSYKIMDRAYHNIQENAEFF 725
++ + +Y + Y + AE F
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/590 (25%), Positives = 271/590 (45%), Gaps = 66/590 (11%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
+L+ GY R + + E+L M++ I+ S + K + GD + + ++MI
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESL--LHVMHKYMCVADFFAYNILINAYCIRGQTS 226
G RP+ + LI F +N R G+++ L M + D F YN LI
Sbjct: 447 GCRPNVVIYTTLIKTFLQNS--RFGDAMRVLKEMKEQGIAPDIFCYNSLI---------- 494
Query: 227 YALGKCGAGRM------IFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
+G A RM + +M+ E GL PN Y A ++GY++A + A+ +EMR
Sbjct: 495 --IGLSKAKRMDEARSFLVEMV-ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
+ P+ V +++ +CK G + + R + G+L + Y + + GL ++D+A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
E F +M KGI+P +F++ +I +S+ G + A + M + GLTP+ + LL G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
C+ G + +A +LL +M KG N V + ++DGY + GDL A L++E+ + + PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSR------------IGFV--------------- 493
+ ++ ++G + V+ A +F + I +V
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 494 -----------PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
PN+ YN +I C G L A +L +M+ L+P T+ ++NG+
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 543 KQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYA-----GGL 597
K GR F + G+ PD + Y+ +I + K +A LV++M+A G
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 598 DPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
I+T + G+ + +M A +++ +V +P++ T L+N C
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/648 (23%), Positives = 269/648 (41%), Gaps = 101/648 (15%)
Query: 75 TWVISRIGAGRSKHMVEFM--CDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMRE 132
W ++ + + + EF+ DD LFG L GY+ E + +
Sbjct: 127 NWPVAEVWSSIVRCSQEFVGKSDDGVLFG-------ILFDGYIAKGYIEEAVFVFSSSMG 179
Query: 133 VGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRI 192
+ ++P S +L +LLR W +++ M+ RN
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE------------------RN----- 216
Query: 193 GESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVV 252
V D Y++LI A+C G LGK ++F +E
Sbjct: 217 ------------VVFDVKTYHMLIIAHCRAGNVQ--LGK----DVLFKTEKE-------- 250
Query: 253 VYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDL 312
A LN +D A L E M + + P T+++++ G CK +ED LL ++
Sbjct: 251 FRTATLN-------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 313 SVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLE 372
G+ + Y + + GL D A +M GI+ + ++ I S+ G+
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 373 ENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVL 432
E A + M GL P + +SL+ G C++ + + ++LL +M ++ I+ + +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 433 LDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGF 492
+ G GDL GA ++ E+ P+ V ++ I + +A V EM G
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 493 VPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIING------------ 540
P+ F YNSLI G +++EA EM + GL P+ FT+ I+G
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 541 -----------------------FCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
+CK+G++ A A+ M G++ D TY L+ G
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 578 KALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTV 637
K + A+E+ +M G+ PD+ +Y + ++G+ + M +A+ + DE+V G+ PN +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 638 TYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
YN L+ G C +++A + ++ PN VT ++ +CK G
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 211/455 (46%), Gaps = 19/455 (4%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
A + GY+ A + + MRE G++P++ T L + G +R M+
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G T+ L+ G +N + E + M D F+Y +LIN +
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS-------K 639
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
LG IFD + EEGL+PNV++YN LL G+ ++ +I++A L +EM + + P+AVT
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
+ I+ G+CK G + + RL ++ + GL+P+ +Y V G C ++ A+ F
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTN 758
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIM-----HQFGLTPSSCTCSSLLVGLCK 403
+KG + S FN++I + G E E + +FG P+ T + ++ LCK
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCK 817
Query: 404 KGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVA 463
+G L A +L +M + +T LL+GY ++G +++E I PD +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 464 FSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYN-----SLIAGFCNRGKLNEALKL 518
+S IN K G+ +A + +M V + + +L++GF G++ A K+
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 519 EREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
M + +PD+ T +IN C + DA
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADA 972
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 242 bits (618), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 224/471 (47%), Gaps = 7/471 (1%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ L+H L+ E ME+ RM G PS + L L + D SV L ++M
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
LG +P+ YTF I R G I +L M C D Y +LI+A C
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC------- 304
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAV 287
K + +F+ ++ P+ V Y LL+ + RD+D + EM PD V
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 288 TFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDM 347
TF I+V CK G + L + G+LPN Y+ + GL RLD+A+E F +M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 348 FEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRL 407
G+ P+ + + I Y ++G +A E ++ M G+ P+ C++ L L K GR
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 408 PEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAY 467
EA + + + G + V + +++ Y ++G++ A L +E+ PD + ++
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
IN L KA VDEA+ +F+ M + P YN+L+AG GK+ EA++L M QKG
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCK 578
P+ TFN + + CK + A+ M G VPD+ TYNT+I G K
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 268/590 (45%), Gaps = 64/590 (10%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D V+++L++ + + E ++ RM+E+ + P+ L L + G +LF
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
M+ G P+ TFN L C+N + + +L M CV D F YN +I
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQA------------ 270
GQ A M F ++ + P+ V LL G VKA I+ A
Sbjct: 657 GQVKEA--------MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 271 ----NMLYEEMRSRDIAP----DAVTFN--IIVSGHCKYGGMEDGDRLL----------- 309
N+ +E++ +A +AV+F+ ++ +G C+ DGD +L
Sbjct: 709 DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR-----DGDSILVPIIRYSCKHN 763
Query: 310 -------------RDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSI 356
+DL V LP Y++ + GL A ++ A + F + G P +
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPT---YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 357 FAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCK 416
+N ++ AY ++G + FE YK M ++ T + ++ GL K G + +A DL
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 417 -MIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAG 475
M ++ F + L+DG + G L A+ L+ + P+ ++ ING KAG
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 476 LVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFN 535
D A +F M + G P+ Y+ L+ C G+++E L +E+++ GL PD +N
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 536 IIINGFCKQGRMKPAIDAFMDMYRT-GLVPDIVTYNTLIGGYCKALDIVRADELVNKMYA 594
+IING K R++ A+ F +M + G+ PD+ TYN+LI A + A ++ N++
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 595 GGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
GL+P++ T+N + GY K A + +V+ G PNT TY L N
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 161/656 (24%), Positives = 292/656 (44%), Gaps = 31/656 (4%)
Query: 68 LLAQDVVTWVISRIGAGRSKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEIL 127
++A + + +++ G R + + D L D + ++ Y +V E +++L
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 128 YRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRN 187
M E G P + L +L + WK+F M + +P+ T+N L+ G +N
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 188 GCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGL 247
G I+ L M + C + +N L + C + + AL +M+F M+ + G
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL------KMLFKMM-DMGC 639
Query: 248 SPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDR 307
P+V YN ++ G VK + +A + +M+ + + PD VT ++ G K +ED +
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 308 LLRDLSVSGLLPNCT------LYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
+ ++ L NC ++ + + +D A+ F E + GI +S
Sbjct: 699 I-----ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD---GDS 750
Query: 362 IIAAYSRAGLEENAFEAYKIMHQ-----FGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCK 416
I+ R + N + + + G+ P T + L+ GL + + A D+ +
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 417 MIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
+ G + + LLD Y + G + L+ E++ + + + + I+GL KAG
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 477 VDEAYGVFLE-MSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFN 535
VD+A ++ + MS F P Y LI G G+L EA +L M G P+ +N
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 536 IIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAG 595
I+INGF K G A F M + G+ PD+ TY+ L+ C + ++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 596 GLDPDITTYNIRMHGYCNIRKMNQAAMMLDEL-VSAGIVPNTVTYNTL-MNGVCCDILDR 653
GL+PD+ YN+ ++G ++ +A ++ +E+ S GI P+ TYN+L +N +++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 654 AIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYK 709
A I ++ + PNV T N L+ + G PE Q + F + +Y+
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 250/540 (46%), Gaps = 20/540 (3%)
Query: 171 RPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILIN-----AYCIRGQT 225
R +N T+ + G ++ L M ++ V + ++YN LI+ +C
Sbjct: 151 RDTN-TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
Y RMI EG P++ Y++L+ G K RDID L +EM + + P+
Sbjct: 210 VYR-------RMIL-----EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPN 257
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
TF I + + G + + +L+ + G P+ Y + + LC A +LD A E FE
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
M P + +++ +S ++ + + M + G P T + L+ LCK G
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
EA+D L M ++G N + L+ G R+ L A L+ + + P A +
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
+I+ K+G A F +M G PN A N+ + G+ EA ++ ++
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRA 585
GL+PD+ T+N+++ + K G + AI +M G PD++ N+LI KA + A
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 586 DELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG 645
++ +M L P + TYN + G K+ +A + + +V G PNT+T+NTL +
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 646 VC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISF-DF 703
+C D + A+ + K++ M VP+V T N ++ K G ++ + + ++ ++ + DF
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF 677
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 1/462 (0%)
Query: 230 GKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTF 289
GK +FD++Q+ + + Y + + QA +MR +A ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 290 NIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFE 349
N ++ K + + R + + G P+ Y + GL +D M ++M
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 350 KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
G+ P+++ F I RAG A+E K M G P T + L+ LC +L
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
A ++ KM ++V + LLD + DL + W+E+ + PD V F+ ++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLP 529
L KAG EA+ M G +PN YN+LI G +L++AL+L M G+ P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 530 DNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELV 589
+T+ + I+ + K G A++ F M G+ P+IV N + KA A ++
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 590 NKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-C 648
+ GL PD TYN+ M Y + ++++A +L E++ G P+ + N+L+N +
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 649 DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTL 690
D +D A + ++ +M P VVT N LL+ K G ++ +
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 212/469 (45%), Gaps = 4/469 (0%)
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDI 326
+++ +++ M+ R I D T+ I GG++ LR + G + N Y+
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
+ L + EAME + M +G PS+ ++S++ + ++ K M G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQ 446
L P+ T + + L + G++ EA+++L +M ++G + V +TVL+D L A+
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 447 SLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGF 506
++ ++ + PD V + ++ S +D + EM + G VP+ + L+
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 507 CNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDI 566
C G EA MR +G+LP+ T+N +I G + R+ A++ F +M G+ P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 567 VTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDE 626
TY I Y K+ D V A E KM G+ P+I N ++ + +A +
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 627 LVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGM 685
L G+VP++VTYN +M +D AI + +++++ P+V+ N L++ K
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 686 PEKTLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEK 731
++ ++ E+ +Y + IQE E F+ +K
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
+ L G ++E VF M + + Y ++ +G L +A R+MR+ G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE 587
+ + +++N +I+ K A++ + M G P + TY++L+ G K DI
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 588 LVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
L+ +M GL P++ T+ I + K+N+A +L + G P+ VTY L++ +C
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 648 -CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHF 680
LD A + K+ P+ VT LL F
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/648 (25%), Positives = 298/648 (45%), Gaps = 44/648 (6%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
FG ++ G ++ E +++ MR+ P+ SA T L + V +
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
LF+ M LG P+ + F LI GF + G + SLL M AD YN+ I+++
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
+GK F I+ GL P+ V Y +++ KA +D+A ++E +
Sbjct: 249 G-------KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
P +N ++ G+ G ++ LL G +P+ Y+ + L G++DE
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGL------------ 387
A++ FE+M +K +P++ +N +I RAG + AFE M + GL
Sbjct: 362 ALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 388 -----------------------TPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPI 424
TP T SL+ GL K GR+ +A+ + KM++
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 425 NKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVF 484
N + +T L+ +F G ++ ++ + PD + Y++ + KAG ++ +F
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 485 LEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQ 544
E+ FVP+ +Y+ LI G G NE +L M+++G + D +NI+I+GFCK
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 545 GRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTY 604
G++ A +M G P +VTY ++I G K + A L + + ++ ++ Y
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 605 NIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG-VCCDILDRAIIIAAKLLK 663
+ + G+ + ++++A ++L+EL+ G+ PN T+N+L++ V + ++ A++ + +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 664 MAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
+ PN VT +L++ CK K ++ Q++ + SY M
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/588 (26%), Positives = 274/588 (46%), Gaps = 16/588 (2%)
Query: 98 HLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGS 157
HLF + L+ G+ + + +L M+ + + S +VG
Sbjct: 204 HLFTT-------LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 158 VWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILIN 217
WK F ++ G +P T+ ++I C+ + + + K V +AYN +I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 218 AYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEM 277
Y + GK + + + +G P+V+ YN +L K +D+A ++EEM
Sbjct: 317 GYG-------SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 278 RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRL 337
+ +D AP+ T+NI++ C+ G ++ L + +GL PN +I V LC + +L
Sbjct: 370 K-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 338 DEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
DEA FE+M K +P F S+I + G ++A++ Y+ M +S +SL
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
+ GR + + MI + + +D F+ G+ ++++ E+ R+
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 458 FPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
PDA ++S I+GL KAG +E Y +F M G V + AYN +I GFC GK+N+A +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 518 LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
L EM+ KG P T+ +I+G K R+ A F + + ++V Y++LI G+
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 578 KALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTV 637
K I A ++ ++ GL P++ T+N + ++N+A + + PN V
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 638 TYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
TY L+NG+C ++A + ++ K P+ ++ ++S K G
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 158/633 (24%), Positives = 281/633 (44%), Gaps = 77/633 (12%)
Query: 149 LLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVAD 208
+ R ++ ++ ++ +M G PS T ++LG + +R G ++ +M K+
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 209 FFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDID 268
F AY LI A+ + L +F +QE G P V ++ L+ G+ K +D
Sbjct: 168 FSAYTTLIGAFSAVNHSDMML-------TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 269 QANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITV 328
A L +EM+S + D V +N+ + K G ++ + ++ +GL P+ Y +
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 329 AGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAF------------ 376
LC A RLDEA+E FE + + P +A+N++I Y AG + A+
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 377 --------------------EAYKIMHQF--GLTPSSCTCSSLLVGLCKKGRLPEAWDLL 414
EA K+ + P+ T + L+ LC+ G+L A++L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 415 CKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKA 474
M + G N +++D + L A +++ E++ + PD + F + I+GL K
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 475 GLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM------------ 522
G VD+AY V+ +M N+ Y SLI F N G+ + K+ ++M
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 523 -----------------------RQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYR 559
+ + +PD +++I+I+G K G + F M
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 560 TGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQ 619
G V D YN +I G+CK + +A +L+ +M G +P + TY + G I ++++
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 620 AAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLS 678
A M+ +E S I N V Y++L++G +D A +I +L++ PN+ T N LL
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 679 HFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
K + L+ Q + E+ ++ +Y I+
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 157/625 (25%), Positives = 284/625 (45%), Gaps = 15/625 (2%)
Query: 43 VCDDSESTIRSCCIAAHIFAAEDLRLLAQDVVTWVISRIGAGRSKHMVEFMCDDFHLFGS 102
VC DS + +A F + L D VT+ S IG + ++ + F
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT-SMIGVLCKANRLDEAVEMFEHLEK 301
Query: 103 DFRV-----LDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGS 157
+ RV + ++ GY E +L R R G +PS A + L ++G
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 158 VWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILIN 217
K+F +M P+ T+N LI CR G + L M K + NI+++
Sbjct: 362 ALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 218 AYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEM 277
C + A +F+ + + +P+ + + +L++G K +D A +YE+M
Sbjct: 421 RLCKSQKLDEACA-------MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 278 RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRL 337
D +++ + ++ +G EDG ++ +D+ P+ L + + + AG
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 338 DEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
++ FE++ + P +++ +I +AG +E + M + G + + +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
+ G CK G++ +A+ LL +M KGF V + ++DG +I L A L+ E ++I
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 458 FPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
+ V +S+ I+G K G +DEAY + E+ + G PN + +NSL+ ++NEAL
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 518 LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
+ M++ P+ T+ I+ING CK + A + +M + G+ P ++Y T+I G
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 578 KALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTV 637
KA +I A L ++ A G PD YN + G N + A + +E G+ +
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 638 TYNTLMNGVC-CDILDRAIIIAAKL 661
T L++ + D L++A I+ A L
Sbjct: 834 TCVVLLDTLHKNDCLEQAAIVGAVL 858
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 201/415 (48%), Gaps = 4/415 (0%)
Query: 274 YEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCW 333
YE P++ ++V C+ + D++L ++SV+G P+ V G
Sbjct: 88 YERRTELPHCPESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVK 145
Query: 334 AGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCT 393
A +L E + + M + P+ A+ ++I A+S + ++ M + G P+
Sbjct: 146 ANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHL 205
Query: 394 CSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELN 453
++L+ G K+GR+ A LL +M + V + V +D + ++G + A ++E+
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 454 RRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLN 513
+ PD V +++ I L KA +DEA +F + + VP +AYN++I G+ + GK +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 514 EALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI 573
EA L R KG +P +N I+ K G++ A+ F +M + P++ TYN LI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILI 384
Query: 574 GGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIV 633
C+A + A EL + M GL P++ T NI + C +K+++A M +E+
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 634 PNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPE 687
P+ +T+ +L++G+ +D A + K+L N + L+ +F G E
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 246/518 (47%), Gaps = 11/518 (2%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF DM+ P PS FN L+ + + SL M D + Y+I IN +C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R Q S AL + + + G P++V ++LLNGY ++ I A L ++M
Sbjct: 130 RRSQLSLALA-------VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD TF ++ G + + L+ + G P+ Y V GLC G +D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ M I ++ FN+II + + E A + + M G+ P+ T +SL+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR +A LL M+EK N V F L+D +F+ G L+ A+ L E+ +R I PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+ ++ ING +DEA +F M +PN YN+LI GFC ++ + ++L R
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM Q+GL+ + T+ II GF + G A F M + DI+TY+ L+ G C
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ A + + ++ +I YN + G C K+ +A D S I P+ VTYN
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYN 539
Query: 641 TLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLL 677
T+++G+C +L A + K+ + +PN T N L+
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 237/504 (47%), Gaps = 10/504 (1%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D ++ + R + + +L +M ++G P ++ L L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
M+ +G +P +TF LI G + +L+ M + C D Y ++N C R
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G AL + + ++ + NVV++N +++ K R ++ A L+ EM ++ I
Sbjct: 237 GDIDLALN-------LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
P+ VT+N +++ C YG D RLL ++ + PN ++ + G+L EA +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
E+M ++ I P +N +I + + A + +K M P+ T ++L+ G C
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
K R+ + +L +M ++G N V +T ++ G+F+ GD AQ ++ ++ ++ D +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM 522
+S ++GL G +D A +F + + N F YN++I G C GK+ EA L +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 523 RQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDI 582
K PD T+N +I+G C + ++ A D F M G +P+ TYNTLI + D
Sbjct: 530 SIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 583 VRADELVNKMYAGGLDPDITTYNI 606
+ EL+ +M + G D +T ++
Sbjct: 587 AASAELIKEMRSSGFVGDASTISL 610
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/585 (26%), Positives = 269/585 (45%), Gaps = 39/585 (6%)
Query: 103 DFR-VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKL 161
D+R +L L ++V+ + ++ + + R PS L ++ ++ + V L
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRP---FPSIVEFNKLLSAVAKMNKFELVISL 105
Query: 162 FRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCI 221
M LG YT++ I FCR + + ++L M K D + L+N YC
Sbjct: 106 GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH 165
Query: 222 RGQTSYALG----------------------------KCGAGRMIFDMIQEEGLSPNVVV 253
+ S A+ K + D + + G P++V
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLS 313
Y ++NG K DID A L +M + I + V FN I+ CKY +E L ++
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 314 VSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
G+ PN Y+ + LC GR +A +M EK I+P++ FN++I A+ + G
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 374 NAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLL 433
A + ++ M Q + P + T + L+ G C RL EA + M+ K N + L+
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFV 493
+G+ + + L+ E+++R + + V ++ I G +AG D A VF +M
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 494 PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
+ Y+ L+ G C+ GKL+ AL + + +++ + + F +N +I G CK G++ A D
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 554 FMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCN 613
F + + PD+VTYNT+I G C + AD+L KM G P+ TYN + N
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA--N 580
Query: 614 IRKMNQAAM--MLDELVSAGIVPNTVTYNTLMNGVCCDILDRAII 656
+R ++AA ++ E+ S+G V + T + + N + LD++ +
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFL 625
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 212/446 (47%), Gaps = 1/446 (0%)
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDI 326
+D A L+ +M P V FN ++S K E L + G+ + Y I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
+ C +L A+ M + G P I +S++ Y + +A M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQ 446
P + T ++L+ GL + EA L+ +M+++G + V + +++G + GD+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 447 SLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGF 506
+L N++ +I + V F+ I+ L K V+ A +F EM G PN YNSLI
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 507 CNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDI 566
CN G+ ++A +L M +K + P+ TFN +I+ F K+G++ A +M + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 567 VTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDE 626
+TYN LI G+C + A ++ M + P+I TYN ++G+C +++ + E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 627 LVSAGIVPNTVTYNTLMNG-VCCDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGM 685
+ G+V NTVTY T++ G D A ++ +++ +++T ++LL C G
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 686 PEKTLLWGQKLSEISFDFDETSYKIM 711
+ L+ + L + + + Y M
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTM 509
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 1/348 (0%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
++D+A++ F DM + PSI FN +++A ++ E + M G++ T S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
+ C++ +L A +L KM++ G+ + V + LL+GY + A +L +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
PD F+ I+GL EA + +M + G P+ Y +++ G C RG ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
L L +M + + FN II+ CK ++ A+D F +M G+ P++VTYN+LI
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C A L++ M ++P++ T+N + + K+ +A + +E++ I P+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 636 TVTYNTLMNGVCC-DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCK 682
T+TYN L+NG C + LD A + ++ +PN+ T N L++ FCK
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 469 NGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
N LS VD+A +F +M + P+ +N L++ K + L +M+ G+
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 529 PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADEL 588
D +T++I IN FC++ ++ A+ M + G PDIVT ++L+ GYC + I A L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 589 VNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC- 647
V++M G PD T+ +HG K ++A ++D++V G P+ VTY T++NG+C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 648 -CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCK 682
DI D A+ + K+ NVV N ++ CK
Sbjct: 236 RGDI-DLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 284/598 (47%), Gaps = 13/598 (2%)
Query: 48 ESTIRSCCIAAHI-FAAEDLRLLAQDVVTWVISRIGAGRSKHMVEF---MCDDFHLFGSD 103
+S + S CI H+ A++DL++ AQ +++ R + V+F + + +GSD
Sbjct: 116 DSNLESLCIVIHLAVASKDLKV-AQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSD 174
Query: 104 FRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLR-VGDYGSVWKLF 162
RV D + + E + +M G++ S + + L + + +F
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
R+ +G + ++N +I C+ G I+ LL +M D +Y+ ++N YC
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC-- 292
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G+ + ++++ +GL PN +Y +++ + + +A + EM + I
Sbjct: 293 -----RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
PD V + ++ G CK G + + ++ + P+ Y ++G C G + EA +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
F +MF KG+ P F +I Y +AG ++AF + M Q G +P+ T ++L+ GLC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
K+G L A +LL +M + G N + +++G + G++ A L E + D V
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM 522
++ ++ K+G +D+A + EM G P +N L+ GFC G L + KL M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 523 RQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDI 582
KG+ P+ TFN ++ +C + +K A + DM G+ PD TY L+ G+CKA ++
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 583 VRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
A L +M G ++TY++ + G+ +K +A + D++ G+ + ++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 239 bits (609), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 232/454 (51%), Gaps = 1/454 (0%)
Query: 231 KCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFN 290
K ++F E G+ NV YN +++ + I +A+ L M + PD ++++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 291 IIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEK 350
+V+G+C++G ++ +L+ + GL PN +Y + LC +L EA E F +M +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 351 GISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEA 410
GI P + ++I + + G A + + MH +TP T ++++ G C+ G + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 411 WDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYING 470
L +M KG + V FT L++GY + G + A + N + + P+ V ++ I+G
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 471 LSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPD 530
L K G +D A + EM +IG PN F YNS++ G C G + EA+KL E GL D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 531 NFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVN 590
T+ +++ +CK G M A + +M GL P IVT+N L+ G+C + ++L+N
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 591 KMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CD 649
M A G+ P+ TT+N + YC + A + ++ S G+ P+ TY L+ G C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 650 ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQ 683
+ A + ++ F +V T +VL+ F K+
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 216/420 (51%), Gaps = 9/420 (2%)
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLL---PNCTLYDITVAGLCWAGR 336
+D D F++ +G + + R+ + GL+ +C +Y ++ C+ +
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--K 226
Query: 337 LDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSS 396
A+ F + E G+ ++ ++N +I + G + A +M G TP + S+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 397 LLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRK 456
++ G C+ G L + W L+ M KG N + ++ RI L A+ ++E+ R+
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 457 IFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEAL 516
I PD V ++ I+G K G + A F EM P+ Y ++I+GFC G + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 517 KLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGY 576
KL EM KGL PD+ TF +ING+CK G MK A M + G P++VTY TLI G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 577 CKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNT 636
CK D+ A+EL+++M+ GL P+I TYN ++G C + +A ++ E +AG+ +T
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 637 VTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGM---PEKTLLW 692
VTY TLM+ C +D+A I ++L P +VT NVL++ FC GM EK L W
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 227/494 (45%), Gaps = 8/494 (1%)
Query: 72 DVVTWVISRIGAGRSKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMR 131
++V + ++G + H + + + + D +++GY R +V +++ M+
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLME-LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 132 EVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIR 191
G+ P+ + L R+ + F +MI G P + LI GFC+ G IR
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 192 IGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNV 251
+ MH D Y +I+ +C G AG++ +M + GL P+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM------VEAGKLFHEMFCK-GLEPDS 421
Query: 252 VVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRD 311
V + L+NGY KA + A ++ M +P+ VT+ ++ G CK G ++ + LL +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 312 LSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGL 371
+ GL PN Y+ V GLC +G ++EA++ + G++ + +++ AY ++G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 372 EENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTV 431
+ A E K M GL P+ T + L+ G C G L + LL M+ KG N F
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 432 LLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIG 491
L+ Y +L A +++ ++ R + PD + + G KA + EA+ +F EM G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 492 FVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAI 551
F + Y+ LI GF R K EA ++ +MR++GL D F+ + K R +
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 552 DAFMDMYRTGLVPD 565
D ++ LV +
Sbjct: 722 DPIDEIIENYLVDE 735
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 212/426 (49%), Gaps = 12/426 (2%)
Query: 338 DEAMEFFEDMF----EKGISPSIF-AFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSC 392
D ++FF+ + + G P +F F ++ + GL A ++ M +GL S
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDF---GLLREARRVFEKMLNYGLVLSVD 211
Query: 393 TCSSLLVGLCKKG-RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNE 451
+C+ L L K + A + + E G N ++ +++ ++G + A L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 452 LNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGK 511
+ + PD +++S +NG + G +D+ + + M R G PN++ Y S+I C K
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 512 LNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNT 571
L EA + EM ++G+LPD + +I+GFCK+G ++ A F +M+ + PD++TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 572 LIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAG 631
+I G+C+ D+V A +L ++M+ GL+PD T+ ++GYC M A + + ++ AG
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 632 IVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTL 690
PN VTY TL++G+C + LD A + ++ K+ PN+ T N +++ CK G E+ +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 691 LWGQKLSEISFDFDETSYKIMDRAYHNIQENAEFFQETSEKSLFLDFLMGCMTLNV-TGD 749
+ + D +Y + AY E + QE ++ L +T NV
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGE-MDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 750 FCVQSM 755
FC+ M
Sbjct: 571 FCLHGM 576
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/682 (25%), Positives = 302/682 (44%), Gaps = 64/682 (9%)
Query: 11 KAFSQKFCPYFLVKVM-KLLETRETAFAFFKLVVCDDS-ESTIRSCCIAAHIFAAEDLRL 68
K F P ++ +V+ +L E + AF FFK + + + ++ S CI AHI +
Sbjct: 100 KLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYY 159
Query: 69 LAQDVVTWVISRIGAGRSKHMVEFMCDDFHLFGSD-------FRVLDALLHGYLRVEMSA 121
A V+ ++ + + CD F + S F V DAL + + M
Sbjct: 160 DANSVLKEMV----------LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLE 209
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
E ++ +M+ + P + L ++G V + F+DMI G RP+
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT-------- 261
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDM 241
F YNI+I+ C G A R +F+
Sbjct: 262 ---------------------------VFTYNIMIDCMCKEGDVE-------AARGLFEE 287
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
++ GL P+ V YN++++G+ K +D +EEM+ PD +T+N +++ CK+G
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
+ G R++ +GL PN Y V C G + +A++F+ DM G+ P+ + + S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I A + G +AF M Q G+ + T ++L+ GLC R+ EA +L KM G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
N ++ L+ G+ + ++ A L NEL R I PD + + +I GL ++ A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
V EM G N+ Y +L+ + G E L L EM++ + TF ++I+G
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 542 CKQGRMKPAIDAFMDMYRT-GLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPD 600
CK + A+D F + GL + + +I G CK + A L +M GL PD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 601 ITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAA 659
T Y M G + +A + D++ G+ + + Y +L+ G+ C+ L +A
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 660 KLLKMAFVPN-VVTTNVLLSHF 680
+++ P+ V+ +VL H+
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHY 729
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 241/509 (47%), Gaps = 9/509 (1%)
Query: 202 KYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGY 261
+ +CV F ++ L + G A+ +C F ++ + P N LL+ +
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAI-QC------FSKMKRFRVFPKTRSCNGLLHRF 237
Query: 262 VKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNC 321
K D +++M P T+NI++ CK G +E L ++ GL+P+
Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 322 TLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKI 381
Y+ + G GRLD+ + FFE+M + P + +N++I + + G E Y+
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 382 MHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGD 441
M GL P+ + S+L+ CK+G + +A M G N+ +T L+D +IG+
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 442 LIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNS 501
L A L NE+ + + + V ++A I+GL A + EA +F +M G +PN +YN+
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 502 LIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTG 561
LI GF ++ AL+L E++ +G+ PD + I G C +++ A +M G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 562 LVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAA 621
+ + + Y TL+ Y K+ + L+++M ++ + T+ + + G C + +++A
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 622 MMLDELVSA-GIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSH 679
+ + + G+ N + +++G+C D ++ A + ++++ VP+ L+
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 680 FCKQGMPEKTLLWGQKLSEISFDFDETSY 708
KQG + L K++EI D +Y
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 194/396 (48%), Gaps = 4/396 (1%)
Query: 354 PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDL 413
P F+++ + G+ E A + + M +F + P + +C+ LL K G+ +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 414 LCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSK 473
MI G + +++D + GD+ A+ L+ E+ R + PD V +++ I+G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 474 AGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFT 533
G +D+ F EM + P+ YN+LI FC GKL L+ REM+ GL P+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 534 FNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMY 593
++ +++ FCK+G M+ AI ++DM R GLVP+ TY +LI CK ++ A L N+M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 594 AGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG-VCCDILD 652
G++ ++ TY + G C+ +M +A + ++ +AG++PN +YN L++G V +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 653 RAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMD 712
RA+ + +L P+++ + C E + ++ E + Y +
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 713 RAYH---NIQENAEFFQETSEKSLFLDFLMGCMTLN 745
AY N E E E + + + C+ ++
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 239/520 (45%), Gaps = 44/520 (8%)
Query: 32 RETAFAFFKLVVCDDSESTIRSCCIAAHIFAAEDLRLLAQDVVTW--VISRIG-AGRSKH 88
R T F + ++ C E + + A +F R L D VT+ +I G GR
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEA---ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 89 MVEF------MCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAI 142
V F MC + D +AL++ + + +E M+ G+ P+ +
Sbjct: 316 TVCFFEEMKDMCCE-----PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 143 TILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNG----CIRIGESLLH 198
+ L + + G K + DM +G P+ YT+ +LI C+ G R+G +L
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 199 VMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRM-----IFDMIQEEGLSPNVVV 253
V ++ V Y LI+ G C A RM +F + G+ PN+
Sbjct: 431 VGVEWNVVT----YTALID------------GLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLS 313
YNAL++G+VKA+++D+A L E++ R I PD + + + G C +E ++ ++
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 314 VSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
G+ N +Y + +G E + ++M E I ++ F +I + L
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 374 NAFEAY-KIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVL 432
A + + +I + FGL ++ ++++ GLCK ++ A L +M++KG ++ A+T L
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Query: 433 LDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGF 492
+DG F+ G+++ A +L +++ + D +A+++ + GLS + +A EM G
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 493 VPNNFAYNSLIAGFCNRGKLNEALKLERE-MRQKGLLPDN 531
P+ S++ G ++EA++L+ M+ + L DN
Sbjct: 715 HPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN 754
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 251/518 (48%), Gaps = 8/518 (1%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LFRDMI P P+ FN L + + +L M + +I+IN +C
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
+ SYA G I + G P+ V++N LLNG + +A L + M
Sbjct: 135 RCRKLSYAFSTMGK-------IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
P +T N +V+G C G + D L+ + +G PN Y + +C +G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
ME M E+ I ++ II + G +NAF + M G T ++L+ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
C GR + LL MI++ N V F+VL+D + + G L A L E+ +R I P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+ +++ I+G K ++EA + M G P+ +N LI G+C ++++ L+L R
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
EM +G++ + T+N ++ GFC+ G+++ A F +M + PDIV+Y L+ G C
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
++ +A E+ K+ ++ DI Y I +HG CN K++ A + L G+ + YN
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 641 TLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLL 677
+++ +C D L +A I+ K+ + P+ +T N+L+
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 256/534 (47%), Gaps = 7/534 (1%)
Query: 123 VMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALIL 182
V+ + +M GI S ++I+ R + ++ LG P FN L+
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 183 GFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMI 242
G C + L+ M + N L+N C+ G+ S A+ ++ D +
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV-------VLIDRM 219
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGM 302
E G PN V Y +LN K+ A L +M R+I DAV ++II+ G CK G +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
++ L ++ + G + Y+ + G C AGR D+ + DM ++ ISP++ F+ +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
I ++ + G A + K M Q G+ P++ T +SL+ G CK+ RL EA ++ MI KG
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
+ + F +L++GY + + L+ E++ R + + V ++ + G ++G ++ A
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
+F EM P+ +Y L+ G C+ G+L +AL++ ++ + + D + III+G C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 543 KQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDIT 602
++ A D F + G+ D YN +I C+ + +AD L KM G PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 603 TYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAII 656
TYNI + + AA +++E+ S+G + T ++N + LD++ +
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFL 633
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 240/473 (50%), Gaps = 37/473 (7%)
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
DMIQ L P V+ +N L + K + + L ++M S+ IA T +I+++ C+
Sbjct: 78 DMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
+ + + G P+ +++ + GLC R+ EA+E +
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR------------- 183
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
M + G P+ T ++L+ GLC G++ +A L+ +M+E
Sbjct: 184 ----------------------MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
GF N+V + +L+ + G A L ++ R I DAV +S I+GL K G +D
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
A+ +F EM GF + YN+LI GFCN G+ ++ KL R+M ++ + P+ TF+++I+
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
F K+G+++ A +M + G+ P+ +TYN+LI G+CK + A ++V+ M + G DP
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIA 658
DI T+NI ++GYC +++ + E+ G++ NTVTYNTL+ G C L+ A +
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 659 AKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
+++ P++V+ +LL C G EK L K+ + + D Y I+
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 230/474 (48%), Gaps = 7/474 (1%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
+ D + + LL+G +E +E++ RM E+G P+ + L L G
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
L M+ G +P+ T+ ++ C++G + LL M + D Y+I+I+
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C G A +F+ ++ +G +++ YN L+ G+ A D L +M
Sbjct: 274 CKDGSLDNAFN-------LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
R I+P+ VTF++++ K G + + D+LL+++ G+ PN Y+ + G C RL+E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A++ + M KG P I FN +I Y +A ++ E ++ M G+ ++ T ++L+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
G C+ G+L A L +M+ + + V++ +LLDG G+L A ++ ++ + K+
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D + I+G+ A VD+A+ +F + G + AYN +I+ C + L++A L
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI 573
R+M ++G PD T+NI+I A + +M +G D+ T +I
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 244/530 (46%), Gaps = 9/530 (1%)
Query: 79 SRIGAGRSKHMVEFMCDDFHLFG--SDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIM 136
S I + +V +C G L +++ + R + + ++ ++G
Sbjct: 96 SAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE 155
Query: 137 PSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESL 196
P L L +L M+ +G +P+ T N L+ G C NG + L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 197 LHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNA 256
+ M + + Y ++N C GQT+ A+ + ++E + + V Y+
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME-------LLRKMEERNIKLDAVKYSI 268
Query: 257 LLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSG 316
+++G K +D A L+ EM + D +T+N ++ G C G +DG +LLRD+
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 317 LLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAF 376
+ PN + + + G+L EA + ++M ++GI+P+ +NS+I + + E A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 377 EAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGY 436
+ +M G P T + L+ G CK R+ + +L +M +G N V + L+ G+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 437 FRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNN 496
+ G L A+ L+ E+ R++ PD V++ ++GL G +++A +F ++ + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 497 FAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMD 556
Y +I G CN K+++A L + KG+ D +NI+I+ C++ + A F
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 557 MYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNI 606
M G PD +TYN LI + D A EL+ +M + G D++T +
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 190/430 (44%), Gaps = 45/430 (10%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+ D+A++ F DM + P++ FN + +A ++ E K M G+ S T S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
++ C+ +L A+ + K+++ G+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYE-------------------------------- 155
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
PD V F+ +NGL V EA + M +G P N+L+ G C GK+++A
Sbjct: 156 ---PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
+ L M + G P+ T+ ++N CK G+ A++ M + D V Y+ +I G
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
CK + A L N+M G DI TYN + G+CN + + A +L +++ I PN
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 636 TVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
VT++ L++ + L A + ++++ PN +T N L+ FCK+ E+ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 695 KLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKSLFLDFLMGCMTLN-VTGDF 750
+ D D ++ I+ Y + I + E F+E S + + + +T N + F
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV----IANTVTYNTLVQGF 448
Query: 751 CVQSMKLQTA 760
C QS KL+ A
Sbjct: 449 C-QSGKLEVA 457
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 492 FVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAI 551
F N +Y ++ K ++A+ L R+M Q LP FN + + K + + +
Sbjct: 49 FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108
Query: 552 DAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGY 611
M G+ I T + +I +C+ + A + K+ G +PD +N ++G
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 612 CNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNV 670
C ++++A ++D +V G P +T NTL+NG+C + + A+++ ++++ F PN
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 671 VTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
VT +L+ CK G + +K+ E + D Y I+
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 186/732 (25%), Positives = 325/732 (44%), Gaps = 74/732 (10%)
Query: 13 FSQKFCPYFLVKVMKLLETRETAFAFFKLVVCDDSESTIRSCCIAAHIFAAEDLRLLAQD 72
F + P ++K++K + AFA F S + HI LR L++
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSAT--RHPGYAHSAVVYHHI-----LRRLSET 56
Query: 73 VVTWVISRI-GAGRSKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMR 131
+ +SRI RS+ E CD+ V +++ Y + M + +++ RMR
Sbjct: 57 RMVNHVSRIVELIRSQ---ECKCDE--------DVALSVIKTYGKNSMPDQALDVFKRMR 105
Query: 132 EVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIR 191
E+ G P+ ++N L+ F
Sbjct: 106 EI----------------------------------FGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 192 IGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNV 251
ESL + YN+LI C + + A G D + +EG P+V
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG-------FLDWMWKEGFKPDV 184
Query: 252 VVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCK----YGGMEDGDR 307
Y+ ++N KA +D A L++EM R +APD +NI++ G K ME DR
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 308 LLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYS 367
LL D SV PN ++I ++GL GR+D+ ++ +E M + ++ ++S+I
Sbjct: 245 LLEDSSV---YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 368 RAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKV 427
AG + A + + + + T +++L G C+ G++ E+ +L +++E +N V
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIV 360
Query: 428 AFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEM 487
++ +L+ G G + A +W + + D + +I+GL G V++A GV E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 488 SRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRM 547
G + +AY S+I C + +L EA L +EM + G+ ++ N +I G + R+
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 548 KPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIR 607
A +M + G P +V+YN LI G CKA A V +M G PD+ TY+I
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 608 MHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC-DILDRAIIIAAKLLKMAF 666
+ G C RK++ A + + + +G+ + + +N L++G+C LD A+ + A +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 667 VPNVVTTNVLLSHFCKQGMPEK-TLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENA 722
N+VT N L+ F K G + T++WG + ++ D SY + + +
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGY-MYKMGLQPDIISYNTIMKGLCMCRGVSYAM 659
Query: 723 EFFQETSEKSLF 734
EFF + +F
Sbjct: 660 EFFDDARNHGIF 671
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 238/530 (44%), Gaps = 52/530 (9%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGP-RPSNYTFNAL 180
+ +E+ M E G+ P + IL L+ D+ + +L+ ++ P+ T N +
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 181 ILGFCRNG----CIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGR 236
I G + G C++I E M + D + Y+ LI+ C G A
Sbjct: 262 ISGLSKCGRVDDCLKIWER----MKQNEREKDLYTYSSLIHGLCDAGNVDKA-------E 310
Query: 237 MIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGH 296
+F+ + E S +VV YN +L G+ + I ++ L+ M ++ + + V++NI++ G
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGL 369
Query: 297 CKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSI 356
+ G +++ + R + G + T Y I + GLC G +++A+ +++ G +
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 357 FAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCK 416
+A+ SII LCKK RL EA +L+ +
Sbjct: 430 YAYASIIDC-----------------------------------LCKKKRLEEASNLVKE 454
Query: 417 MIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
M + G +N L+ G R L A E+ + P V+++ I GL KAG
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 477 VDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNI 536
EA EM G+ P+ Y+ L+ G C K++ AL+L + Q GL D NI
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 537 IINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGG 596
+I+G C G++ A+ +M ++VTYNTL+ G+ K D RA + MY G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 597 LDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV 646
L PDI +YN M G C R ++ A D+ + GI P T+N L+ V
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 215/474 (45%), Gaps = 13/474 (2%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMRE-VGIMPSESAITILFKSLLRVGDYGSVWKL 161
D + L+ G+L+ + ME+ R+ E + P+ I+ L + G K+
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 162 FRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCI 221
+ M YT+++LI G C G + ES+ + + + D YN ++ +C
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC- 336
Query: 222 RGQTSYALGKCGAGRMIFDM--IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
+CG + ++ I E S N+V YN L+ G ++ ID+A M++ M +
Sbjct: 337 ---------RCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
+ A D T+ I + G C G + +++++ SG + Y + LC RL+E
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A ++M + G+ + N++I R A + M + G P+ + + L+
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
GLCK G+ EA + +M+E G+ + +++LL G R + A LW++ + +
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
D + + I+GL G +D+A V M N YN+L+ GF G N A +
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLI 573
M + GL PD ++N I+ G C + A++ F D G+ P + T+N L+
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 172/407 (42%), Gaps = 8/407 (1%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D +L+HG + + + E + R G +L+
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
R M H + ++N LI G NG I + +M AD Y I I+ C+
Sbjct: 349 RIMEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G + ALG + ++ G +V Y ++++ K + +++A+ L +EM +
Sbjct: 408 GYVNKALG-------VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
++ N ++ G + + + LR++ +G P Y+I + GLC AG+ EA
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
F ++M E G P + ++ ++ R + A E + Q GL + L+ GLC
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
G+L +A ++ M + N V + L++G+F++GD A +W + + + PD +
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNR 509
+++ + GL V A F + G P + +N L+ NR
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/627 (24%), Positives = 293/627 (46%), Gaps = 82/627 (13%)
Query: 118 EMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTF 177
+M +E ++ + +R GI PS ++T+L L++ + +F +++ RPS + +
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 178 NALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRM 237
I Q + L G G
Sbjct: 183 GKAI------------------------------------------QAAVKLSDVGKGLE 200
Query: 238 IFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHC 297
+F+ ++ + + P+V +YN L++G K + ++ A L++EM +R + P +T+N ++ G+C
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 298 KYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIF 357
K G E ++ + + P+ ++ + GL AG +++A ++M + G P F
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 358 AFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKM 417
F+ + YS E A Y+ G+ ++ TCS LL LCK+G++ +A ++L +
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 418 IEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLV 477
+ KG N+V + ++DGY R GDL+GA+ + ++ + PD +A++ I + G +
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 478 -----------------------------------DEAYGVFLEMSRIGFVPNNFAYNSL 502
D+ + + EM G +PN +Y +L
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 503 IAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGL 562
I C KL EA ++R+M +G+ P +N++I+G C +G+++ A +M + G+
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 563 VPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAM 622
++VTYNTLI G + A++L+ ++ GL PD+ TYN + GY + +
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 623 MLDELVSAGIVPNTVTYNTLMNGVCCDILDRAIIIAAKLL-KMAFVPNVVTTNVLLSHFC 681
+ +E+ +GI P TY+ L++ +C I + +L +M+ P+++ N +L +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLIS-LCT---KEGIELTERLFGEMSLKPDLLVYNGVLHCYA 676
Query: 682 KQGMPEKTLLWGQKLSEISFDFDETSY 708
G EK +++ E S D+T+Y
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTY 703
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 256/550 (46%), Gaps = 33/550 (6%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ L+ GY + + ++ RM+ I PS L K L + G + ++M
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHV----------MHKYMCVADFFAYNILIN 217
LG P +TF+ L G+ N E+ L V M+ Y C +IL+N
Sbjct: 313 LGFVPDAFTFSILFDGYSSN---EKAEAALGVYETAVDSGVKMNAYTC-------SILLN 362
Query: 218 AYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEM 277
A C G+ A I +GL PN V+YN +++GY + D+ A M E M
Sbjct: 363 ALCKEGKIEKA-------EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 278 RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRL 337
+ + PD + +N ++ C+ G ME+ ++ + + + G+ P+ Y+I + G
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 338 DEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
D+ + ++M + G P++ ++ ++I + A + M G++P + L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
+ G C KG++ +A+ +M++KG +N V + L+DG G L A+ L E++R+ +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 458 FPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
PD +++ I+G AG V ++ EM R G P Y+ LI+ C + E ++
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTK----EGIE 650
Query: 518 L-EREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGY 576
L ER + L PD +N +++ + G M+ A + M + D TYN+LI G
Sbjct: 651 LTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 577 CKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNT 636
K + L+++M A ++P+ TYNI + G+C ++ A + E+ G + +
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 637 VTYNTLMNGV 646
N L++G+
Sbjct: 771 CIGNELVSGL 780
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 230/518 (44%), Gaps = 38/518 (7%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+ LL G + M + +L M+++G +P +ILF + ++
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
+ G + + YT + L+ C+ G I E +L V + YN +I+ YC +G
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
A RM + ++++G+ P+ + YN L+ + + +++ A +M+ + ++P
Sbjct: 406 VGA-------RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
T+NI++ G+ + + +L+++ +G +PN Y + LC +L EA
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
DM ++G+SP + +N +I G E+AF K M + G+ + T ++L+ GL G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
+L EA DLL ++ KG + + L+ GY G++ +L+ E+ R I P +
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 466 AYINGLSKAGL-------------------------------VDEAYGVFLEMSRIGFVP 494
I+ +K G+ +++A+ + +M
Sbjct: 639 LLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 495 NNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAF 554
+ YNSLI G GKL E L EM + + P+ T+NII+ G C+ A +
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 555 MDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKM 592
+M G + D+ N L+ G + A+ ++++M
Sbjct: 759 REMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 225/490 (45%), Gaps = 9/490 (1%)
Query: 252 VVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRD 311
++ + LLN +++ I +A L+ +R+ I P + + +++ K + +
Sbjct: 113 LLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 312 LSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGL 371
+ S P+ +Y + + + +E F M I PS+F +N +I +
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 372 EENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTV 431
+A + + M L PS T ++L+ G CK G +++ + +M + + F
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 432 LLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIG 491
LL G F+ G + A+++ E+ PDA FS +G S + A GV+ G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 492 FVPNNFAYNSLIAGFCNRGKLNEALK-LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPA 550
N + + L+ C GK+ +A + L REM KGL+P+ +N +I+G+C++G + A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREM-AKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 551 IDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG 610
M + G+ PD + YN LI +C+ ++ A++ VNKM G+ P + TYNI + G
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 611 YCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPN 669
Y + ++ +L E+ G +PN V+Y TL+N +C L A I+ + P
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 670 VVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAYH---NIQENAEFFQ 726
V N+L+ C +G E + +++ + + + +Y + + E +
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 727 ETSEKSLFLD 736
E S K L D
Sbjct: 589 EISRKGLKPD 598
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 160/340 (47%), Gaps = 6/340 (1%)
Query: 353 SPSI---FAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
SPS+ F++ + + + + A + + + G+ PSS + + LL L K +
Sbjct: 103 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRV 162
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
++ ++E F +K + + ++ D+ L+N + +I+P ++ I+
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLP 529
GL K +++A +F EM +P+ YN+LI G+C G ++ K+ M+ + P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 530 DNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELV 589
TFN ++ G K G ++ A + +M G VPD T++ L GY A +
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 590 NKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-- 647
G+ + T +I ++ C K+ +A +L ++ G+VPN V YNT+++G C
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 648 CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPE 687
D++ + I A + K P+ + N L+ FC+ G E
Sbjct: 403 GDLVGARMKIEA-MEKQGMKPDHLAYNCLIRRFCELGEME 441
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 256/534 (47%), Gaps = 43/534 (8%)
Query: 145 LFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYM 204
L SL R G + +++ +M+ P+ YT+N ++ G+C+ G + + + +
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 205 CVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKA 264
DFF Y LI YC R A +F+ + +G N V Y L++G A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFK-------VFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 265 RDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLY 324
R ID+A L+ +M+ + P T+ +++ C + L++++ +G+ PN Y
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 325 DITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQ 384
+ + LC + ++A E M EKG+ P++ +N++I Y + G+ E+A + ++M
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 385 FGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIG 444
L+P++ T + L+ G CK + +A +L KM+E+ + V + L+DG R G+
Sbjct: 422 RKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 445 AQSLWNELNRRKIFPD-----------------------------------AVAFSAYIN 469
A L + +N R + PD V ++A I+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLP 529
G KAG VDEA+ + +M +PN+ +N+LI G C GKL EA LE +M + GL P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 530 DNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELV 589
T I+I+ K G A F M +G PD TY T I YC+ ++ A++++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 590 NKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLM 643
KM G+ PD+ TY+ + GY ++ + N A +L + G P+ T+ +L+
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 224/432 (51%), Gaps = 2/432 (0%)
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLS 313
YN LLN + +D+ +Y EM + P+ T+N +V+G+CK G +E+ ++ + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 314 VSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
+GL P+ Y + G C LD A + F +M KG + A+ +I A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 374 NAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLL 433
A + + M P+ T + L+ LC R EA +L+ +M E G N +TVL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFV 493
D A+ L ++ + + P+ + ++A ING K G++++A V M
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 494 PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
PN YN LI G+C + +++A+ + +M ++ +LPD T+N +I+G C+ G A
Sbjct: 426 PNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 554 FMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCN 613
M GLVPD TY ++I CK+ + A +L + + G++P++ Y + GYC
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 614 IRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVT 672
K+++A +ML++++S +PN++T+N L++G+C D L A ++ K++K+ P V T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 673 TNVLLSHFCKQG 684
+L+ K G
Sbjct: 605 DTILIHRLLKDG 616
Score = 226 bits (575), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 160/660 (24%), Positives = 289/660 (43%), Gaps = 65/660 (9%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ +++GY ++ E + + ++ E G+ P T L + D S +K+F +M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
G R + + LI G C I L M C Y +LI + C + S
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAV 287
AL + ++E G+ PN+ Y L++ ++A L +M + + P+ +
Sbjct: 342 ALN-------LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 288 TFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDM 347
T+N +++G+CK G +ED ++ + L PN Y+ + G C + + +AM M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKM 453
Query: 348 FEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRL 407
E+ + P + +NS+I R+G ++A+ +M+ GL P T +S++ LCK R+
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 408 PEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAY 467
EA DL + +KG N V +T L+DGY + G + A + ++ + P+++ F+A
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
I+GL G + EA + +M +IG P LI G + A ++M G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGY----------- 576
PD T+ I +C++GR+ A D M G+ PD+ TY++LI GY
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 577 ---------------------------------------CKALDIVRAD---ELVNKMYA 594
C +++ D EL+ KM
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 595 GGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELV-SAGIVPNTVTYNTLMNGVCCDIL-- 651
+ P+ +Y + G C + + A + D + + GI P+ + +N L++ CC +
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS-CCCKLKKH 812
Query: 652 DRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
+ A + ++ + +P + + VL+ K+G E+ Q L + + DE ++KI+
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 149/603 (24%), Positives = 258/603 (42%), Gaps = 63/603 (10%)
Query: 105 RVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRD 164
R L+ E +E + ++ M E GI P+ T+L SL + +L
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 165 MIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQ 224
M+ G P+ T+NALI G+C+ G I ++ +M + YN LI YC +
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSN 442
Query: 225 TSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAP 284
A+G + + + E + P+VV YN+L++G ++ + D A L M R + P
Sbjct: 443 VHKAMG-------VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 285 DAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFF 344
D T+ ++ CK +E+ L L G+ PN +Y + G C AG++DEA
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 345 EDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKK 404
E M K P+ FN++I GLC
Sbjct: 556 EKMLSKNCLPNSLTFNALIH-----------------------------------GLCAD 580
Query: 405 GRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAF 464
G+L EA L KM++ G T+L+ + GD A S + ++ PDA +
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 465 SAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQ 524
+ +I + G + +A + +M G P+ F Y+SLI G+ + G+ N A + + MR
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 525 KGLLPDNFTFNIIIN-----GFCKQGRMKPAIDAFMD-------------MYRTGLVPDI 566
G P TF +I + KQ +P + A + M + P+
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 567 VTYNTLIGGYCKALDIVRADELVNKMYAG-GLDPDITTYNIRMHGYCNIRKMNQAAMMLD 625
+Y LI G C+ ++ A+++ + M G+ P +N + C ++K N+AA ++D
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 626 ELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
+++ G +P + L+ G+ +R + LL+ + + + +++ KQG
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
Query: 685 MPE 687
+ E
Sbjct: 881 LVE 883
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 215/444 (48%), Gaps = 14/444 (3%)
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
+N +++ ++G +++ ++ ++ + PN Y+ V G C G ++EA ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLP 408
E G+ P F + S+I Y + ++AF+ + M G + + L+ GLC R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 409 EAWDLLCKMIE-KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAY 467
EA DL KM + + FP + +TVL+ A +L E+ I P+ ++
Sbjct: 306 EAMDLFVKMKDDECFPTVR-TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
I+ L ++A + +M G +PN YN+LI G+C RG + +A+ + M + L
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE 587
P+ T+N +I G+CK K A+ M ++PD+VTYN+LI G C++ + A
Sbjct: 425 SPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 588 LVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
L++ M GL PD TY + C +++ +A + D L G+ PN V Y L++G C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 648 -CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDET 706
+D A ++ K+L +PN +T N L+ C G ++ L +K+ +I +
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 707 SYKIM----------DRAYHNIQE 720
+ I+ D AY Q+
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQ 627
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 180/345 (52%), Gaps = 2/345 (0%)
Query: 345 EDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKK 404
++ FE I +N+++ + +R GL + + Y M + + P+ T + ++ G CK
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 405 GRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAF 464
G + EA + K++E G + +T L+ GY + DL A ++NE+ + + VA+
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 465 SAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQ 524
+ I+GL A +DEA +F++M P Y LI C + +EAL L +EM +
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 525 KGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVR 584
G+ P+ T+ ++I+ C Q + + A + M GL+P+++TYN LI GYCK I
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 585 ADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
A ++V M + L P+ TYN + GYC +++A +L++++ ++P+ VTYN+L++
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 645 GVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEK 688
G C D A + + + VP+ T ++ CK E+
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 204/474 (43%), Gaps = 25/474 (5%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D ++L+ G R +L M + G++P + T + SL + LF
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+ G P+ + ALI G+C+ G + +L M C+ + +N LI+ C
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC-- 578
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
A GK ++ + + + GL P V L++ +K D D A +++M S
Sbjct: 579 -----ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
PDA T+ + +C+ G + D + ++ + +G+ P+ Y + G G+ + A +
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
+ M + G PS F S+I + LE K Q G P C S+++
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLI----KHLLE------MKYGKQKGSEPELCAMSNMM---- 739
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRK-IFPDA 461
+LL KM+E N ++ L+ G +G+L A+ +++ + R + I P
Sbjct: 740 ---EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 462 VAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLERE 521
+ F+A ++ K +EA V +M +G +P + LI G +G+ + +
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 522 MRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
+ Q G D + III+G KQG ++ + F M + G TY+ LI G
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 248/524 (47%), Gaps = 14/524 (2%)
Query: 144 ILFKSLLRVG----DYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHV 199
+ F+ LR G LF++MI P PS F+ R +
Sbjct: 54 VCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQ 113
Query: 200 MHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLN 259
+ + + NI+IN +C +T +A G + + G P+ +N L+
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK-------VMKLGYEPDTTTFNTLIK 166
Query: 260 GYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLP 319
G + +A +L + M PD VT+N IV+G C+ G LLR + +
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 320 NCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAY 379
+ Y + LC G +D A+ F++M KGI S+ +NS++ +AG +
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 380 KIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRI 439
K M + P+ T + LL K+G+L EA +L +MI +G N + + L+DGY
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 440 GDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAY 499
L A ++ + + R K PD V F++ I G VD+ VF +S+ G V N Y
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 500 NSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYR 559
+ L+ GFC GK+ A +L +EM G+LPD T+ I+++G C G+++ A++ F D+ +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 560 TGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQ 619
+ + IV Y T+I G CK + A L + G+ P++ TY + + G C +++
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 620 AAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAIIIAAKLLK 663
A ++L ++ G PN TYNTL+ + D + +AKL++
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRA---HLRDGDLTASAKLIE 567
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 256/521 (49%), Gaps = 7/521 (1%)
Query: 136 MPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGES 195
+PS + F ++ R + V + + G + YT N +I FCR S
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 196 LLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYN 255
+L + K D +N LI + G+ S A+ ++ D + E G P+VV YN
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV-------VLVDRMVENGCQPDVVTYN 197
Query: 256 ALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVS 315
+++NG ++ D A L +M R++ D T++ I+ C+ G ++ L +++
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 316 GLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENA 375
G+ + Y+ V GLC AG+ ++ +DM + I P++ FN ++ + + G + A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 376 FEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDG 435
E YK M G++P+ T ++L+ G C + RL EA ++L M+ + V FT L+ G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 436 YFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPN 495
Y + + ++ +++R + +AV +S + G ++G + A +F EM G +P+
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 496 NFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFM 555
Y L+ G C+ GKL +AL++ ++++ + + II G CK G+++ A + F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 556 DMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIR 615
+ G+ P+++TY +I G CK + A+ L+ KM G P+ TYN + +
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 616 KMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAII 656
+ +A +++E+ S G + + +++ + LD++ +
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFL 598
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 238/497 (47%), Gaps = 9/497 (1%)
Query: 79 SRIGAGRSKHMVEFMCDDFHLFG--SDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIM 136
S I + ++V C L G + L+ +++ + R + +L ++ ++G
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 137 PSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESL 196
P + L K L G L M+ G +P T+N+++ G CR+G + L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 197 LHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNA 256
L M + AD F Y+ +I++ C G A+ +F ++ +G+ +VV YN+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS-------LFKEMETKGIKSSVVTYNS 268
Query: 257 LLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSG 316
L+ G KA + +L ++M SR+I P+ +TFN+++ K G +++ + L +++ G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 317 LLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAF 376
+ PN Y+ + G C RL EA + M SP I F S+I Y ++
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 377 EAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGY 436
+ ++ + + GL ++ T S L+ G C+ G++ A +L +M+ G + + + +LLDG
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 437 FRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNN 496
G L A ++ +L + K+ V ++ I G+ K G V++A+ +F + G PN
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 497 FAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMD 556
Y +I+G C +G L+EA L R+M + G P++ T+N +I + G + + +
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 557 MYRTGLVPDIVTYNTLI 573
M G D + +I
Sbjct: 569 MKSCGFSADASSIKMVI 585
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 241/492 (48%), Gaps = 5/492 (1%)
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
+MI+ L P++V ++ + + + + +++ IA + T NI+++ C+
Sbjct: 78 EMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRC 136
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
+L + G P+ T ++ + GL G++ EA+ + M E G P + +
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
NSI+ R+G A + + M + + T S+++ LC+ G + A L +M
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
KG + V + L+ G + G L ++ R+I P+ + F+ ++ K G + E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
A ++ EM G PN YN+L+ G+C + +L+EA + M + PD TF +I
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
G+C R+ + F ++ + GLV + VTY+ L+ G+C++ I A+EL +M + G+ P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIA 658
D+ TY I + G C+ K+ +A + ++L + + V Y T++ G+C ++ A +
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 659 AKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAY--- 715
L PNV+T V++S CK+G + + +K+ E ++ +Y + RA+
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 716 HNIQENAEFFQE 727
++ +A+ +E
Sbjct: 557 GDLTASAKLIEE 568
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 204/402 (50%), Gaps = 1/402 (0%)
Query: 303 EDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSI 362
+D L +++ S LP+ + + + + + ++F + + GI+ +I+ N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 363 IAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGF 422
I + R A+ + + G P + T ++L+ GL +G++ EA L+ +M+E G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 423 PINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYG 482
+ V + +++G R GD A L ++ R + D +S I+ L + G +D A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 483 VFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFC 542
+F EM G + YNSL+ G C GK N+ L ++M + ++P+ TFN++++ F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 543 KQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDIT 602
K+G+++ A + + +M G+ P+I+TYNTL+ GYC + A+ +++ M PDI
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 603 TYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKL 661
T+ + GYC +++++ + + G+V N VTY+ L+ G C + A + ++
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 662 LKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDF 703
+ +P+V+T +LL C G EK L + L + D
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 177/419 (42%), Gaps = 82/419 (19%)
Query: 313 SVSGLLPNCT--LYDITVAGLCWAGRL---------DEAMEFFEDMFEKGISPSIFAFNS 361
++S +C I+ +C+ RL D+A+ F++M PS+ F+
Sbjct: 34 TISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSR 93
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+A +R QF +L++ CK+ L G
Sbjct: 94 FFSAIART-------------KQF----------NLVLDFCKQLEL------------NG 118
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
N ++++ + R A S+ ++ + PD F+ I GL G V EA
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
+ M G P+ YNS++ G C G + AL L R+M ++ + D FT++ II+
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKA---------------------- 579
C+ G + AI F +M G+ +VTYN+L+ G CKA
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 580 ------LDIV-------RADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDE 626
LD+ A+EL +M G+ P+I TYN M GYC ++++A MLD
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 627 LVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
+V P+ VT+ +L+ G C +D + + + K V N VT ++L+ FC+ G
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 134 GIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIG 193
G+ P+ T++ L + G L R M G P++ T+N LI R+G +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 194 ESLLHVMHKYMCVADFFAYNILIN 217
L+ M AD + ++I+
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVID 586
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/607 (25%), Positives = 284/607 (46%), Gaps = 47/607 (7%)
Query: 134 GIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIG 193
G+ PS++ IL SL+R ++ + F D++ G P
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSP--------------------- 271
Query: 194 ESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVV 253
D + + INA+C G+ A+ +F ++E G++PNVV
Sbjct: 272 --------------DVYLFTTAINAFCKGGKVEEAVK-------LFSKMEEAGVAPNVVT 310
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLS 313
+N +++G D+A M E+M R + P +T++I+V G + + D +L++++
Sbjct: 311 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 370
Query: 314 VSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEE 373
G PN +Y+ + AG L++A+E + M KG+S + +N++I Y + G +
Sbjct: 371 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 430
Query: 374 NAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLL 433
NA K M G + + +S++ LC A + +M+ + T L+
Sbjct: 431 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 490
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFV 493
G + G A LW + + D +A ++GL +AG +DEA+ + E+ G V
Sbjct: 491 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 550
Query: 494 PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
+ +YN+LI+G C + KL+EA EM ++GL PDN+T++I+I G +++ AI
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 610
Query: 554 FMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCN 613
+ D R G++PD+ TY+ +I G CKA E ++M + + P+ YN + YC
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 670
Query: 614 IRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVT 672
+++ A + +++ GI PN+ TY +L+ G+ ++ A ++ ++ PNV
Sbjct: 671 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 730
Query: 673 TNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAYH---NIQENAEFFQETS 729
L+ + K G K +++ + ++ +Y +M Y N+ E + E
Sbjct: 731 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 790
Query: 730 EKSLFLD 736
EK + D
Sbjct: 791 EKGIVPD 797
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/547 (26%), Positives = 255/547 (46%), Gaps = 42/547 (7%)
Query: 134 GIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIG 193
G+ P T + + G KLF M G P+ TFN +I G C R
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL--GMCGRYD 325
Query: 194 ESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVV 253
E+ M K V ++ + ++G T + G + + ++G PNV+V
Sbjct: 326 EAF---MFKEKMVERGMEPTLITYSILVKGLTRAK--RIGDAYFVLKEMTKKGFPPNVIV 380
Query: 254 YNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDL- 312
YN L++ +++A +++A + + M S+ ++ + T+N ++ G+CK G ++ +RLL+++
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440
Query: 313 ------------SVSGLL----------------------PNCTLYDITVAGLCWAGRLD 338
SV LL P L ++GLC G+
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 500
Query: 339 EAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLL 398
+A+E + KG N+++ AG + AF K + G + ++L+
Sbjct: 501 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 560
Query: 399 VGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIF 458
G C K +L EA+ L +M+++G + +++L+ G F + + A W++ R +
Sbjct: 561 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 620
Query: 459 PDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKL 518
PD +S I+G KA +E F EM PN YN LI +C G+L+ AL+L
Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680
Query: 519 EREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCK 578
+M+ KG+ P++ T+ +I G R++ A F +M GL P++ Y LI GY K
Sbjct: 681 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 740
Query: 579 ALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVT 638
+V+ + L+ +M++ + P+ TY + + GY + +A+ +L+E+ GIVP+++T
Sbjct: 741 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 800
Query: 639 YNTLMNG 645
Y + G
Sbjct: 801 YKEFIYG 807
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 221/479 (46%), Gaps = 13/479 (2%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L+ G R + + +L M + G P+ L S + G ++ M+ G
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 170 PRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYAL 229
++ T+N LI G+C+NG E LL M + ++ +I C AL
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 230 GKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTF 289
R + +M+ +SP + L++G K +A L+ + ++ D T
Sbjct: 469 ------RFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 290 NIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFE 349
N ++ G C+ G +++ R+ +++ G + + Y+ ++G C +LDEA F ++M +
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 350 KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
+G+ P + ++ +I E A + + + G+ P T S ++ G CK R E
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
+ +M+ K N V + L+ Y R G L A L ++ + I P++ +++ I
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE---REMRQKG 526
G+S V+EA +F EM G PN F Y +LI G+ GKL + +K+E REM K
Sbjct: 702 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY---GKLGQMVKVECLLREMHSKN 758
Query: 527 LLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRA 585
+ P+ T+ ++I G+ + G + A +M G+VPD +TY I GY K ++ A
Sbjct: 759 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 210/446 (47%), Gaps = 28/446 (6%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
F + V + L+ ++ + +EI M G+ + S L K + G +
Sbjct: 374 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 433
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCR----NGCIR-IGESLLHVM-------------- 200
+L ++M+ +G + +F ++I C + +R +GE LL M
Sbjct: 434 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 493
Query: 201 --HKYMCVADFFAYNILINAYCIRGQTSYAL--GKCGAGRM-----IFDMIQEEGLSPNV 251
H A + L + + +TS AL G C AG++ I I G +
Sbjct: 494 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 553
Query: 252 VVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRD 311
V YN L++G + +D+A M +EM R + PD T++I++ G +E+ + D
Sbjct: 554 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 613
Query: 312 LSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGL 371
+G+LP+ Y + + G C A R +E EFF++M K + P+ +N +I AY R+G
Sbjct: 614 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 673
Query: 372 EENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTV 431
A E + M G++P+S T +SL+ G+ R+ EA L +M +G N +T
Sbjct: 674 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 733
Query: 432 LLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIG 491
L+DGY ++G ++ + L E++ + + P+ + ++ I G ++ G V EA + EM G
Sbjct: 734 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 793
Query: 492 FVPNNFAYNSLIAGFCNRGKLNEALK 517
VP++ Y I G+ +G + EA K
Sbjct: 794 IVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 189/433 (43%), Gaps = 40/433 (9%)
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A++ F + KG+ PS N ++ + RA + EA+ ++ + G++P ++ +
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 281
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
CK G++ EA L KM E G N V F ++DG G A ++ R + P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLE 519
+ +S + GL++A + +AY V EM++ GF PN YN+LI F G LN+A++++
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 520 REMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTG------------------ 561
M KGL + T+N +I G+CK G+ A +M G
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 562 -----------------LVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTY 604
+ P TLI G CK +A EL + G D T
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 605 NIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC-DILDRAIIIAAKLLK 663
N +HG C K+++A + E++ G V + V+YNTL++G C LD A + +++K
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 664 MAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRA---YHNIQE 720
P+ T ++L+ E+ + + D +Y +M +E
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 721 NAEFFQETSEKSL 733
EFF E K++
Sbjct: 642 GQEFFDEMMSKNV 654
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 269/582 (46%), Gaps = 44/582 (7%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
+F L LL Y+++ + +L M + G + IL K L R + G L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
R+M P +++N +I GFC + L + M C + ILI+A+C
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G+ A+G ++ GL ++VVY +L+ G+ ++D+ L++E+ R
Sbjct: 226 GKMDEAMG-------FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
+P A+T+N ++ G CK G +++ + + G+ PN Y + GLC G+ EA++
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
M EK P+ +N II + GL +A E ++M + P + T + LL GLC
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 403 KKGRLPEAWDLL------------------------CK-------------MIEKGFPIN 425
KG L EA LL CK ++EK +
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 426 KVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFL 485
+V +LL+ + GD+ A LW +++ KI ++ ++A I+G K G+++ A G+
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 486 EMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQG 545
+M P+ F YN L++ C G L++A +L EM++ PD +FNI+I+G K G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 546 RMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYN 605
+K A + M R GL PD+ TY+ LI + K + A +KM G +PD +
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 606 IRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
+ + + ++ ++ +LV IV + T+M+ +C
Sbjct: 639 SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 246/501 (49%), Gaps = 12/501 (2%)
Query: 208 DFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDI 267
+F + + L+ Y +T +A G + ++ + G + NV +N LL G + +
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFG-------VLALMLKRGFAFNVYNHNILLKGLCRNLEC 158
Query: 268 DQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDIT 327
+A L EMR + PD ++N ++ G C+ +E L ++ SG + + I
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 328 VAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGL 387
+ C AG++DEAM F ++M G+ + + S+I + G + + + + G
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 388 TPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQS 447
+P + T ++L+ G CK G+L EA ++ MIE+G N +T L+DG +G A
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 448 LWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFC 507
L N + + P+AV ++ IN L K GLV +A + M + P+N YN L+ G C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 508 NRGKLNEALKLEREMRQKGLL--PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPD 565
+G L+EA KL M + PD ++N +I+G CK+ R+ A+D + + D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 566 IVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLD 625
VT N L+ KA D+ +A EL ++ + + TY + G+C +N A +L
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 626 ELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
++ + + P+ YN L++ +C + LD+A + ++ + P+VV+ N+++ K G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 685 --MPEKTLLWGQKLSEISFDF 703
++LL G + +S D
Sbjct: 579 DIKSAESLLVGMSRAGLSPDL 599
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/607 (23%), Positives = 275/607 (45%), Gaps = 46/607 (7%)
Query: 145 LFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYM 204
L L+R ++ + +R M+ + + + L+ + + +L +M K
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 205 CVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKA 264
+ + +NIL+ C + CG + ++ L P+V YN ++ G+ +
Sbjct: 138 FAFNVYNHNILLKGLCRNLE-------CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190
Query: 265 RDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLY 324
+++++A L EM+ + VT+ I++ CK G M++ L+++ GL + +Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 325 DITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQ 384
+ G C G LD F+++ E+G SP +N++I + + G + A E ++ M +
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 385 FGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIG 444
G+ P+ T + L+ GLC G+ EA LL MIEK N V + ++++ + G +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 445 AQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGV-FLEMSRIGFV-PNNFAYNSL 502
A + + +R+ PD + ++ + GL G +DEA + +L + + P+ +YN+L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 503 IAGFC--NR---------------------------------GKLNEALKLEREMRQKGL 527
I G C NR G +N+A++L +++ +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE 587
+ ++ T+ +I+GFCK G + A M + L P + YN L+ CK + +A
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 588 LVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG-V 646
L +M PD+ ++NI + G + A +L + AG+ P+ TY+ L+N +
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 647 CCDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFD-E 705
LD AI K++ F P+ + +L + QG +K +KL + D E
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Query: 706 TSYKIMD 712
+ +MD
Sbjct: 671 LTCTVMD 677
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 184/379 (48%), Gaps = 4/379 (1%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+L A+ F+ + G S + FA N+++A R+ E AF Y+ M + + + S
Sbjct: 53 QLKNAVSVFQQAVDSGSSLA-FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
LL + + A+ +L M+++GF N +LL G R + A SL E+ R
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
+ PD +++ I G + +++A + EM G + + LI FC GK++EA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
+ +EM+ GL D + +I GFC G + F ++ G P +TYNTLI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
+CK + A E+ M G+ P++ TY + G C + K +A +L+ ++ PN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 636 TVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG-MPEKTLLWG 693
VTYN ++N +C D ++ A+ I + K P+ +T N+LL C +G + E + L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 694 QKLSEISF-DFDETSYKIM 711
L + S+ D D SY +
Sbjct: 412 LMLKDSSYTDPDVISYNAL 430
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 236/479 (49%), Gaps = 12/479 (2%)
Query: 175 YTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCG- 233
Y+FN LI FC + S + K D +N L++ C+ + S AL G
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 234 -------AGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDA 286
+FD + E GL+P V+ +N L+NG + +A L +M + + D
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
VT+ IV+G CK G + LL + + + P+ +Y + LC G +A F +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGR 406
M EKGI+P++F +N +I + G +A + M + + P T ++L+ K+G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 407 LPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSA 466
L EA L +M+ + + V + ++ G+ + A+ +++ + PD V F+
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 467 YINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKG 526
I+ +A VDE + E+SR G V N YN+LI GFC LN A L +EM G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 527 LLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRAD 586
+ PD T NI++ GFC+ +++ A++ F + + + D V YN +I G CK + A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 587 ELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG 645
+L + G++PD+ TYN+ + G+C ++ A ++ ++ G P+ TYNTL+ G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 226 bits (577), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 233/458 (50%), Gaps = 25/458 (5%)
Query: 255 NALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSV 314
N ++ +V+ D A LY +M R I + +FNI++ C + L+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 315 SGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEEN 374
G P+ ++ + GLC R+ EA+ F M E G ++ F+ ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMV----------- 218
Query: 375 AFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLD 434
+ GLTP T ++L+ GLC +GR+ EA L+ KM+ KG I+ V + +++
Sbjct: 219 ---------EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 435 GYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVP 494
G ++GD A +L +++ I PD V +SA I+ L K G +A +F EM G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 495 NNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAF 554
N F YN +I GFC+ G+ ++A +L R+M ++ + PD TFN +I+ K+G++ A
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 555 MDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNI 614
+M + PD VTYN++I G+CK A + + M + PD+ T+N + YC
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 615 RKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTT 673
+++++ +L E+ G+V NT TYNTL++G C D L+ A + +++ P+ +T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 674 NVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
N+LL FC+ E+ L + + D D +Y I+
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/582 (26%), Positives = 270/582 (46%), Gaps = 33/582 (5%)
Query: 146 FKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMC 205
FKSL D+ F M+ P + N +I F R + SL M
Sbjct: 84 FKSLDDAIDF------FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRI 137
Query: 206 VADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLN------ 259
+ +++NILI +C + S++L F + + G P+VV +N LL+
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLS-------TFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 260 ---------GYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLR 310
GY+ +A L+++M + P +TFN +++G C G + + L+
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 311 DLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAG 370
+ GL + Y V G+C G A+ M E I P + +++II + G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 371 LEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFT 430
+A + M + G+ P+ T + ++ G C GR +A LL MIE+ + + F
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 431 VLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRI 490
L+ + G L A+ L +E+ R IFPD V +++ I G K D+A +F M+
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 491 GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPA 550
P+ +N++I +C +++E ++L RE+ ++GL+ + T+N +I+GFC+ + A
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 551 IDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG 610
D F +M G+ PD +T N L+ G+C+ + A EL + +D D YNI +HG
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 611 YCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC-DILDRAIIIAAKLLKMAFVPN 669
C K+++A + L G+ P+ TYN +++G C + A ++ K+ P+
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 670 VVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
T N L+ K G +K++ ++ F D + K++
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 247/551 (44%), Gaps = 41/551 (7%)
Query: 127 LYRMREVGIMP-SESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFC 185
LYR E+ +P + + IL K F + LG +P TFN L+ G C
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 186 RNGCIRIGESLLHVMHKYMCVADFF-------------------AYNILINAYCIRGQTS 226
RI E+L + YM F +N LIN C+ G+
Sbjct: 188 LED--RISEAL--ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV- 242
Query: 227 YALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDA 286
A ++ M+ + GL +VV Y ++NG K D A L +M I PD
Sbjct: 243 -----LEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
V ++ I+ CK G D L ++ G+ PN Y+ + G C GR +A D
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKI---MHQFGLTPSSCTCSSLLVGLCK 403
M E+ I+P + FN++I+A + G FEA K+ M + P + T +S++ G CK
Sbjct: 357 MIEREINPDVLTFNALISASVKEG---KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 404 KGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVA 463
R +A + M + V F ++D Y R + L E++RR + +
Sbjct: 414 HNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 464 FSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMR 523
++ I+G + ++ A +F EM G P+ N L+ GFC KL EAL+L ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 524 QKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIV 583
+ D +NIII+G CK ++ A D F + G+ PD+ TYN +I G+C I
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 584 RADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLM 643
A+ L +KM G +PD +TYN + G +++++ ++ E+ S G + T +
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA 649
Query: 644 NGVCCDILDRA 654
+ + LD++
Sbjct: 650 DLITDGRLDKS 660
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 239/511 (46%), Gaps = 37/511 (7%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
F D + LLHG + +E + + M E G + + +
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA------------------- 212
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
LF M+ +G P TFN LI G C G + +L++ M D Y ++N
Sbjct: 213 -LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
C G T AL + ++E + P+VV+Y+A+++ K A L+ EM
Sbjct: 272 CKMGDTKSALN-------LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 280 RDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDE 339
+ IAP+ T+N ++ G C +G D RLLRD+ + P+ ++ ++ G+L E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 340 AMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLV 399
A + ++M + I P +NS+I + + N F+ K M +P T ++++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCK----HNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 400 GLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP 459
C+ R+ E LL ++ +G N + L+ G+ + +L AQ L+ E+ + P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 460 DAVAFSAYINGLSKAGLVDEAYGVF--LEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
D + + + G + ++EA +F ++MS+I + AYN +I G C K++EA
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWD 558
Query: 518 LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
L + G+ PD T+N++I+GFC + + A F M G PD TYNTLI G
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 578 KALDIVRADELVNKMYAGGLDPDITTYNIRM 608
KA +I ++ EL+++M + G D + I+M
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGD--AFTIKM 647
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 192/408 (47%), Gaps = 12/408 (2%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
+++G ++ + + +L +M E I P + + L + G + LF +M+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G P+ +T+N +I GFC G + LL M + D +N LI+A S
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-------SVK 378
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
GK + D + + P+ V YN+++ G+ K D A +++ M S PD VT
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 434
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
FN I+ +C+ +++G +LLR++S GL+ N T Y+ + G C L+ A + F++M
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLP 408
G+ P N ++ + E A E ++++ + + + ++ G+CK ++
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 409 EAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYI 468
EAWDL C + G + + V++ G+ + A L++++ PD ++ I
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 469 NGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEAL 516
G KAG +D++ + EM GF + F ++A G+L+++
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLDKSF 661
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 20/266 (7%)
Query: 436 YFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVP- 494
YF+ L A ++ + R + F AV + I + D A ++ +M I +P
Sbjct: 83 YFK--SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPL 139
Query: 495 NNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAF 554
N +++N LI FC+ KL+ +L ++ + G PD TFN +++G C + R+ A+ F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 555 MDMYRT---------------GLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
M T GL P ++T+NTLI G C ++ A LVNKM GL
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIA 658
D+ TY ++G C + A +L ++ I P+ V Y+ +++ +C D A +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 659 AKLLKMAFVPNVVTTNVLLSHFCKQG 684
+++L+ PNV T N ++ FC G
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFG 345
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 86 SKHMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITIL 145
+KHM + M D + ++ Y R + E M++L + G++ + + L
Sbjct: 420 AKHMFDLMA------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 146 FKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMC 205
V + + LF++MI G P T N L+ GFC N + L V+
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 206 VADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKAR 265
D AYNI+I+ C + A +F + G+ P+V YN +++G+
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWD-------LFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 266 DIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYD 325
I AN+L+ +M+ PD T+N ++ G K G ++ L+ ++ +G +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Query: 326 ITVAGLCWAGRLDEAMEFFEDMF 348
+ VA L GRLD++ F DM
Sbjct: 647 M-VADLITDGRLDKS---FSDML 665
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 271/587 (46%), Gaps = 20/587 (3%)
Query: 110 LLHGYLRVEMSAEVMEIL-YRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFR----D 164
L+ Y + E+ E++ ++ + + E G+ P T + +L + G+ KL
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPD----THFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 165 MIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQ 224
M G +P TFN LI CR +R +L M Y V D + ++ Y G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 225 TSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRD-IA 283
AL I + + E G S + V N +++G+ K ++ A +EM ++D
Sbjct: 240 LDGAL-------RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 284 PDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEF 343
PD TFN +V+G CK G ++ ++ + G P+ Y+ ++GLC G + EA+E
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 344 FEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCK 403
+ M + SP+ +N++I+ + E A E +++ G+ P CT +SL+ GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 404 KGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVA 463
A +L +M KG ++ + +L+D G L A ++ ++ +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 464 FSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMR 523
++ I+G KA EA +F EM G N+ YN+LI G C ++ +A +L +M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 524 QKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIV 583
+G PD +T+N ++ FC+ G +K A D M G PDIVTY TLI G CKA +
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 584 RADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIV-PNTVTYNTL 642
A +L+ + G++ YN + G RK +A + E++ P+ V+Y +
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 643 MNGVC--CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPE 687
G+C + A+ +LL+ FVP + +L M E
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/613 (24%), Positives = 269/613 (43%), Gaps = 66/613 (10%)
Query: 73 VVTWVISRIG----------------AGRSKHMVEFMCDDFHLFG--SDFRVLDALLHGY 114
VV W+I G G S +VE ++G D + L+
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 115 LRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSN 174
R + +L M G++P E T + + + GD ++ M+ G SN
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 175 YTFNALILGFCRNGCIRIGESLLHVM-HKYMCVADFFAYNILINAYCIRGQTSYALGKCG 233
+ N ++ GFC+ G + + + M ++ D + +N L+N C G +A+
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE--- 316
Query: 234 AGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIV 293
I D++ +EG P+V YN++++G K ++ +A + ++M +RD +P+ VT+N ++
Sbjct: 317 ----IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 294 SGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGIS 353
S CK +E+ L R L+ G+LP+ ++ + GLC AME FE+M KG
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 354 PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDL 413
P F +N +I + LC KG+L EA ++
Sbjct: 433 PDEFTYNMLIDS-----------------------------------LCSKGKLDEALNM 457
Query: 414 LCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSK 473
L +M G + + + L+DG+ + A+ +++E+ + ++V ++ I+GL K
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 474 AGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFT 533
+ V++A + +M G P+ + YNSL+ FC G + +A + + M G PD T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 534 FNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMY 593
+ +I+G CK GR++ A + G+ YN +I G + A L +M
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 594 AGG-LDPDITTYNIRMHGYCN-IRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDIL 651
PD +Y I G CN + +A L EL+ G VP + L G+ +
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSM 697
Query: 652 DRAIIIAAKLLKM 664
+ ++ KL+ M
Sbjct: 698 EETLV---KLVNM 707
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 228/483 (47%), Gaps = 44/483 (9%)
Query: 243 QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYG-- 300
++ SP +Y +L ++ D + E+M+S TF I++ + ++
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 301 --------------GME--------------DGDRLL------RDLSVSGLLPNCTLYDI 326
G++ DG+ L +SV G+ P+ + +++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
+ LC A +L A+ EDM G+ P F +++ Y G + A + M +FG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMI-EKGFPINKVAFTVLLDGYFRIGDLIGA 445
+ S+ + + ++ G CK+GR+ +A + + +M + GF ++ F L++G + G + A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 446 QSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAG 505
+ + + + PD +++ I+GL K G V EA V +M PN YN+LI+
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 506 FCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPD 565
C ++ EA +L R + KG+LPD TFN +I G C + A++ F +M G PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 566 IVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLD 625
TYN LI C + A ++ +M G + TYN + G+C K +A + D
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 626 ELVSAGIVPNTVTYNTLMNGVCCDILDRAIIIAAKLLKMAFV----PNVVTTNVLLSHFC 681
E+ G+ N+VTYNTL++G+C R + AA+L+ + P+ T N LL+HFC
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLC---KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 682 KQG 684
+ G
Sbjct: 552 RGG 554
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 4/257 (1%)
Query: 432 LLDGYFRIGDLIGAQSLWNELNRRKIF-PDAVAFSAYINGLSKAGLVDEAYGVFLEMSRI 490
LLD D A L+N +++ F P+ + + L ++G D+ + +M
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 491 GFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK-GLLPDNFTFNIIINGFCKQGRMKP 549
+ LI + +E L + M + GL PD +N ++N +K
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 550 AIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMH 609
+ M G+ PD+ T+N LI C+A + A ++ M + GL PD T+ M
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 610 GYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD--ILDRAIIIAAKLLKMAFV 667
GY ++ A + +++V G + V+ N +++G C + + D I + F
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 668 PNVVTTNVLLSHFCKQG 684
P+ T N L++ CK G
Sbjct: 293 PDQYTFNTLVNGLCKAG 309
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 226 bits (575), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 215/408 (52%), Gaps = 1/408 (0%)
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
DM++ P++V +N LL+ VK + D L ++M I D TFNI+++ C
Sbjct: 75 DMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
+ +L + G P+ V G C R+ +A+ + M E G P I A+
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
N+II + + +AF+ +K + + G+ P+ T ++L+ GLC R +A LL MI+
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
K N + ++ LLD + + G ++ A+ L+ E+ R I PD V +S+ INGL +DE
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
A +F M G + + +YN+LI GFC ++ + +KL REM Q+GL+ + T+N +I
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
GF + G + A + F M G+ PDI TYN L+GG C ++ +A + M +D
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
DI TY + G C K+ +A + L G+ P+ VTY T+M+G+C
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 241/505 (47%), Gaps = 21/505 (4%)
Query: 145 LFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYM 204
L K+ LR LF DM+ P PS FN L+ + + SL M
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 205 CVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKA 264
D + +NI+IN +C Q S AL I + + G P+ V +L+NG+ +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALS-------ILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 265 RDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLY 324
+ A L ++M PD V +N I+ CK + D +++ G+ PN Y
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 325 DITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQ 384
V GLC + R +A DM +K I+P++ +++++ A+ + G A E ++ M +
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 385 FGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIG 444
+ P T SSL+ GLC R+ EA + M+ KG + V++ L++G+ + +
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 445 AQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIA 504
L+ E+++R + + V ++ I G +AG VD+A F +M G P+ + YN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 505 GFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVP 564
G C+ G+L +AL + +M+++ + D T+ +I G CK G+++ A F + GL P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 565 DIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIR--KMNQAAM 622
DIVTY T++ G C + + L KM GL M C + + +A
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL----------MKNDCTLSDGDITLSAE 518
Query: 623 MLDELVSAGIVPNTVTYNTLMNGVC 647
++ +++S G P+ + + +GVC
Sbjct: 519 LIKKMLSCGYAPSLL--KDIKSGVC 541
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 232/501 (46%), Gaps = 17/501 (3%)
Query: 101 GSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWK 160
G D R + L LR + +++ M + PS L +++++ Y V
Sbjct: 49 GGDLR--ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVIS 106
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
L + M LG R YTFN +I FC + + S+L M K D L+N +C
Sbjct: 107 LGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFC 166
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
R + S A+ + D + E G P++V YNA+++ K + ++ A ++E+ +
Sbjct: 167 RRNRVSDAVS-------LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
I P+ VT+ +V+G C D RLL D+ + PN Y + G++ EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
E FE+M I P I ++S+I + A + + +M G + ++L+ G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
CK R+ + L +M ++G N V + L+ G+F+ GD+ AQ +++++ I PD
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
++ + GL G +++A +F +M + + Y ++I G C GK+ EA L
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
+ KGL PD T+ +++G C +G + + M + GL+ + TL G
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC---TLSDG----- 511
Query: 581 DIVRADELVNKMYAGGLDPDI 601
DI + EL+ KM + G P +
Sbjct: 512 DITLSAELIKKMLSCGYAPSL 532
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 6/408 (1%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+L++A++ F DM + PSI FN +++A + + K M G+ T +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
++ C ++ A +L KM++ G+ ++V L++G+ R + A SL +++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
PD VA++A I+ L K V++A+ F E+ R G PN Y +L+ G CN + ++A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
+L +M +K + P+ T++ +++ F K G++ A + F +M R + PDIVTY++LI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C I A+++ + M + G D+ +YN ++G+C +++ + E+ G+V N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 636 TVTYNTLMNGV--CCDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWG 693
TVTYNTL+ G D+ D+A +++ P++ T N+LL C G EK L+
Sbjct: 365 TVTYNTLIQGFFQAGDV-DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 694 QKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKSLFLDFL 738
+ + + D D +Y + R ++E F S K L D +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 205/422 (48%), Gaps = 17/422 (4%)
Query: 124 MEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILG 183
+ IL +M ++G P I L R L M+ +G +P +NA+I
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 184 FCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQ 243
C+ + + + + Y L+N C + S A R++ DMI+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS------DAARLLSDMIK 253
Query: 244 EEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGME 303
++ ++PNV+ Y+ALL+ +VK + +A L+EEM I PD VT++ +++G C + ++
Sbjct: 254 KK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 304 DGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSII 363
+ +++ + G L + Y+ + G C A R+++ M+ F +M ++G+ + +N++I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 364 AAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFP 423
+ +AG + A E + M FG++P T + LL GLC G L +A + M ++
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 424 INKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGV 483
++ V +T ++ G + G + A SL+ L+ + + PD V ++ ++GL GL+ E +
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 484 FLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCK 543
+ +M + G + N+ + G + + +L ++M G P I +G CK
Sbjct: 493 YTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPS--LLKDIKSGVCK 542
Query: 544 QG 545
+
Sbjct: 543 KA 544
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 258/548 (47%), Gaps = 19/548 (3%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
+++ Y +V ++ +E+ YR++E G PS + +LL ++ ++RDM
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G P+ +T+N L+ C+N + + LL M C D +Y +I++ C
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC-------E 228
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
+G GR + E P V VYNAL+NG K D A L EM + I+P+ ++
Sbjct: 229 VGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
++ +++ C G +E L + G PN V G G +A++ + M
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 349 EK-GISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRL 407
G+ P++ A+N+++ + G A + M + G +P+ T SL+ G K+G L
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 408 PEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAY 467
A + KM+ G N V +T +++ R A+SL +++ P F+A+
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNF-AYNSLIAGFCNRGKLNEALKLEREMRQKG 526
I GL AG +D A VF +M + P N YN L+ G ++ EA L RE+ +G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 527 LLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRAD 586
+ + T+N +++G C G A+ M G PD +T N +I YCK RA
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 587 ELVNKMYAG--GLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
++++ + G PD+ +Y + G C ++L+ ++SAGIVP+ T++ L+N
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Query: 645 GVCCDILD 652
C ILD
Sbjct: 644 ---CFILD 648
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/578 (26%), Positives = 259/578 (44%), Gaps = 54/578 (9%)
Query: 144 ILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKY 203
++ + L G SV L + M G S F ++I + + G + + + ++
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 204 MCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVK 263
C YN +++ T + M++ ++ +G PNV YN LL K
Sbjct: 141 GCDPSVKIYNHVLD-------TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 264 ARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTL 323
+D A L EM ++ PDAV++ ++S C+ G +++G L P ++
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSV 248
Query: 324 YDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMH 383
Y+ + GLC A E +M EKGISP++ +++++I +G E AF M
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 384 QFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEK-GFPINKVAFTVLLDGYFRIGDL 442
+ G P+ T SSL+ G +G +A DL +MI G N VA+ L+ G+ G++
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 443 IGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSL 502
+ A S+++ + P+ + + ING +K G +D A ++ +M G PN Y ++
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 503 IAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGL 562
+ C K EA L M ++ P TFN I G C GR+ A F M +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 563 VP-DIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG----------- 610
P +IVTYN L+ G KA I A L +++ G++ +TYN +HG
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 611 ------------------------YCNIRKMNQAAMMLDELVSAG---IVPNTVTYNTLM 643
YC K +AA MLD LVS G P+ ++Y ++
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVI 607
Query: 644 NGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHF 680
G+C + + +I+ +++ VP++ T +VL++ F
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 239/544 (43%), Gaps = 52/544 (9%)
Query: 176 TFNALILGFCRNGCIRIGESLLHVM--HKYMCVADFFAYNILINAYCIRGQTSYALGKCG 233
TF +I +G + + LL M + C D F +I+ Y G A+
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERAVE--- 132
Query: 234 AGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIV 293
+F I+E G P+V +YN +L+ + I M+Y +M+ P+ T+N+++
Sbjct: 133 ----MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 294 SGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGIS 353
CK ++ +LL ++S G P+ Y ++ +C G + E E E FE
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-FE---- 243
Query: 354 PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDL 413
P + +N++I + + AFE + M + G++P+ + S+L+ LC G++ A+
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 414 LCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSK 473
L +M+++G N + L+ G F G A LWN++ R
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG------------------ 345
Query: 474 AGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFT 533
G PN AYN+L+ GFC+ G + +A+ + M + G P+ T
Sbjct: 346 ----------------FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 534 FNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMY 593
+ +INGF K+G + A+ + M +G P++V Y ++ C+ A+ L+ M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 594 AGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAG-IVPNTVTYNTLMNGVC-CDIL 651
P + T+N + G C+ +++ A + ++ PN VTYN L++G+ + +
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 652 DRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
+ A + ++ + T N LL C G+P L K+ DE + ++
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 712 DRAY 715
AY
Sbjct: 570 ILAY 573
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 192/412 (46%), Gaps = 11/412 (2%)
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
+TF +++ G ++ LL+ + + G + L+ ++ G + A+E F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGR 406
+ E G PS+ +N ++ + + Y+ M + G P+ T + LL LCK +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 407 LPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSA 466
+ A LL +M KG + V++T ++ +G + + L + P ++A
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNA 251
Query: 467 YINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKG 526
INGL K A+ + EM G PN +Y++LI CN G++ A +M ++G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 527 LLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRT-GLVPDIVTYNTLIGGYCKALDIVRA 585
P+ +T + ++ G +G A+D + M R GL P++V YNTL+ G+C +IV+A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 586 DELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNG 645
+ + M G P+I TY ++G+ ++ A + ++++++G PN V Y ++
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 646 VC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKL 696
+C A + + K P+V T N + C G L W +K+
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG----RLDWAEKV 479
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 10/314 (3%)
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
F + F V++ G + Q L ++ + F + I+ + GL + A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
+F + G P+ YN ++ ++ + R+M++ G P+ FT+N+++
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDI 601
CK ++ A ++M G PD V+Y T+I C+ + EL + +P +
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVV 246
Query: 602 TTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAK 660
+ YN ++G C A ++ E+V GI PN ++Y+TL+N +C ++ A +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 661 LLKMAFVPNVVTTNVLLSHFCKQGMPEKTL-LWGQKLSEISFDFDETSYKIMDR---AYH 716
+LK PN+ T + L+ +G L LW Q + + +Y + + ++
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 717 NIQENAEFFQETSE 730
NI + F E
Sbjct: 367 NIVKAVSVFSHMEE 380
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 8/293 (2%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ L+ G+ + + + M E+G P+ L + G ++ M+
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
G P+ + ++ CR+ + ESL+ +M K C +N I C G+ +
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAV 287
A ++ M Q+ PN+V YN LL+G KA I++A L E+ R + +
Sbjct: 476 ------AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529
Query: 288 TFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE-- 345
T+N ++ G C G +L+ + V G P+ ++ + C G+ + A + +
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLL 398
+ P + ++ ++I R+ E+ + M G+ PS T S L+
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 18/283 (6%)
Query: 88 HMVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFK 147
HM E C + R +L++G+ + + I +M G P+ T + +
Sbjct: 377 HMEEIGCS------PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 148 SLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVM-HKYMCV 206
+L R + L M PS TFNA I G C G + E + M ++ C
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 207 ADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARD 266
+ YN L++ + A G R IF G+ + YN LL+G A
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAY---GLTREIF----MRGVEWSSSTYNTLLHGSCNAGL 543
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSG---LLPNCTL 323
A L +M +PD +T N+I+ +CK G E ++L DL G P+
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVIS 602
Query: 324 YDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAY 366
Y + GLC + ++ + E M GI PSI ++ +I +
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 247/511 (48%), Gaps = 17/511 (3%)
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
+ +E N Y+ +++G + + ++ A + +DI P V+FN I+SG+CK G
Sbjct: 220 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 279
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
++ + GL+P+ ++I + GLC G + EA+E DM + G+ P +N
Sbjct: 280 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 339
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+ + G+ A+E + M GL+P T + LL G C+ G + LL M+ +G
Sbjct: 340 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 399
Query: 422 FPINKV-AFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEA 480
F +N + +V+L G + G + A SL+N++ + PD VA+S I+GL K G D A
Sbjct: 400 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 459
Query: 481 YGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIING 540
++ EM +PN+ + +L+ G C +G L EA L + G D +NI+I+G
Sbjct: 460 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 519
Query: 541 FCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPD 600
+ K G ++ A++ F + TG+ P + T+N+LI GYCK +I A ++++ + GL P
Sbjct: 520 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 579
Query: 601 ITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-------CDILDR 653
+ +Y M Y N + E+ + GI P VTY+ + G+C C+ + R
Sbjct: 580 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 639
Query: 654 AIIIAA------KLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETS 707
I + P+ +T N ++ + C+ ++ + + + D +
Sbjct: 640 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 699
Query: 708 YKIMDRA---YHNIQENAEFFQETSEKSLFL 735
Y I+ + Y I++ F E+++ L
Sbjct: 700 YNILIDSLCVYGYIRKADSFIYSLQEQNVSL 730
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 233/541 (43%), Gaps = 20/541 (3%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
++++ GY ++ + + G++PS + IL L VG +L DM
Sbjct: 268 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 327
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSY 227
G P + T+N L GF G I ++ M D Y IL+ C
Sbjct: 328 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC------- 380
Query: 228 ALGKCGAGRMIFDMIQEEGLSPNVVV-YNALLNGYVKARDIDQANMLYEEMRSRDIAPDA 286
LG G ++ + G N ++ + +L+G K ID+A L+ +M++ ++PD
Sbjct: 381 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 440
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
V ++I++ G CK G + L ++ +LPN + + GLC G L EA +
Sbjct: 441 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 500
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGR 406
+ G + I +N +I Y+++G E A E +K++ + G+TPS T +SL+ G CK
Sbjct: 501 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 560
Query: 407 LPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSA 466
+ EA +L + G + V++T L+D Y G+ L E+ I P V +S
Sbjct: 561 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 620
Query: 467 YINGLSKAGLVDEAYGVFLE------------MSRIGFVPNNFAYNSLIAGFCNRGKLNE 514
GL + + V E M G P+ YN++I C L+
Sbjct: 621 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 680
Query: 515 ALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIG 574
A M+ + L + T+NI+I+ C G ++ A + + Y TLI
Sbjct: 681 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 740
Query: 575 GYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVP 634
+C D A +L +++ G + I Y+ ++ C +N++ ++S GI P
Sbjct: 741 AHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISP 800
Query: 635 N 635
+
Sbjct: 801 D 801
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 227/524 (43%), Gaps = 55/524 (10%)
Query: 172 PSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGK 231
PS +FN+++ G+C+ G + + +S + K V +++NILIN C+ G + AL
Sbjct: 262 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL-- 319
Query: 232 CGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNI 291
+ DM + G+ P+ V YN L G+ I A + +M + ++PD +T+ I
Sbjct: 320 ----ELASDM-NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 374
Query: 292 IVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTL-YDITVAGLCWAGRLDEAMEFFEDMFEK 350
++ G C+ G ++ G LL+D+ G N + + ++GLC GR+DEA+ F M
Sbjct: 375 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 434
Query: 351 GISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEA 410
G+SP + A++ +I + G + A Y M + P+S T +LL+GLC+KG L EA
Sbjct: 435 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 494
Query: 411 WDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYING 470
LL +I G ++ V + +++DGY + G + A L+ + I P F++ I G
Sbjct: 495 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 554
Query: 471 LSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMR------- 523
K + EA + + G P+ +Y +L+ + N G +L REM+
Sbjct: 555 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 614
Query: 524 ----------------------------------------QKGLLPDNFTFNIIINGFCK 543
+G+ PD T+N II C+
Sbjct: 615 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 674
Query: 544 QGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITT 603
+ A M L TYN LI C I +AD + + +
Sbjct: 675 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 734
Query: 604 YNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
Y + +C A + +L+ G + Y+ ++N +C
Sbjct: 735 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 778
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 238/544 (43%), Gaps = 71/544 (13%)
Query: 108 DALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIH 167
+ L++G V AE +E+ M + G+ P IL K +G W++ RDM+
Sbjct: 303 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 362
Query: 168 LGPRPSNYTFNALILGFCRNGCIRIGESLLH-VMHKYMCVADFFAYNILINAYCIRGQTS 226
G P T+ L+ G C+ G I +G LL ++ + + +++++ C G+
Sbjct: 363 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 422
Query: 227 YALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDA 286
AL +F+ ++ +GLSP++V Y+ +++G K D A LY+EM + I P++
Sbjct: 423 EALS-------LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 475
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
T ++ G C+ G + + LL L SG + LY+I + G +G ++EA+E F+
Sbjct: 476 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535
Query: 347 MFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKI------------------------- 381
+ E GI+PS+ FNS+I Y + +N EA KI
Sbjct: 536 VIETGITPSVATFNSLIYGYCKT---QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 592
Query: 382 -------------MHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLL-------CK----- 416
M G+ P++ T S + GLC+ + +L CK
Sbjct: 593 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 652
Query: 417 MIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
M +G P +++ + ++ R+ L GA + R + + ++ I+ L G
Sbjct: 653 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 712
Query: 477 VDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNI 536
+ +A + + FAY +LI C +G A+KL ++ +G ++
Sbjct: 713 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 772
Query: 537 IINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGG 596
+IN C++ + + F M G+ PD+ C+ + +++DEL++ G
Sbjct: 773 VINRLCRRHLVNESKFFFCLMLSQGISPDL--------DICEVM--IKSDELLSWTIKWG 822
Query: 597 LDPD 600
L PD
Sbjct: 823 LLPD 826
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 197/433 (45%), Gaps = 44/433 (10%)
Query: 252 VVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRD 311
+V++ LL + R +D + + ++M+ +++ ++N ++ + M D + ++D
Sbjct: 167 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 226
Query: 312 LSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGL 371
N Y V GLC +L++A+ F K I PS+ +FNSI++
Sbjct: 227 -------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMS------- 272
Query: 372 EENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTV 431
G CK G + A C +++ G + + +
Sbjct: 273 ----------------------------GYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 304
Query: 432 LLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIG 491
L++G +G + A L +++N+ + PD+V ++ G G++ A+ V +M G
Sbjct: 305 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 364
Query: 492 FVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL-LPDNFTFNIIINGFCKQGRMKPA 550
P+ Y L+ G C G ++ L L ++M +G L +++++G CK GR+ A
Sbjct: 365 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 424
Query: 551 IDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHG 610
+ F M GL PD+V Y+ +I G CK A L ++M + P+ T+ + G
Sbjct: 425 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 484
Query: 611 YCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPN 669
C + +A +LD L+S+G + V YN +++G ++ A+ + +++ P+
Sbjct: 485 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 544
Query: 670 VVTTNVLLSHFCK 682
V T N L+ +CK
Sbjct: 545 VATFNSLIYGYCK 557
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 36/310 (11%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
++L++GY + + AE +IL ++ G+ PS + T L + G+ S+ +L R+M
Sbjct: 547 TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM 606
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
G P+N T++ + G CR E+ HV+ + +
Sbjct: 607 KAEGIPPTNVTYSVIFKGLCRGW---KHENCNHVLRERI--------------------- 642
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
KC G + DM + EG+ P+ + YN ++ + + + A + E M+SR++
Sbjct: 643 ---FEKCKQG--LRDM-ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 696
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
+ T+NI++ C YG + D + L + + Y + C G + A++ F
Sbjct: 697 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 756
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS------SLLV 399
+ +G + SI ++++I R L + + +M G++P C LL
Sbjct: 757 QLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKSDELLS 816
Query: 400 GLCKKGRLPE 409
K G LP+
Sbjct: 817 WTIKWGLLPD 826
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 278/581 (47%), Gaps = 11/581 (1%)
Query: 107 LDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMI 166
++ +L +R + E EI +M +G+ +L ++ LR K+FR ++
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 167 HLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCV-ADFFAYNILINAYCIRGQT 225
G P F+ + C+ + + LL M + V A Y +I A+ G
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
A+ + D + G+ +V+ +L+NGY K ++ +A L+ M +APD
Sbjct: 327 EEAV-------RVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
V F+++V CK ME + + P+ L + G A + A+E F
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
D FE I+ F N I + + G + A K+M Q G+ P+ +++++ C+
Sbjct: 440 DSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
+ A + +M+EKG N +++L+DG+F+ D A + N++N + V ++
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIG-FVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQ 524
INGL K G +A + + + + + +YNS+I GF G + A++ REM +
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 525 KGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVR 584
G P+ TF +INGFCK RM A++ +M L D+ Y LI G+CK D+
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 585 ADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMN 644
A L +++ GL P+++ YN + G+ N+ KM+ A + ++V+ GI + TY T+++
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 645 GVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG 684
G+ D ++ A + ++LL + VP+ + VL++ K+G
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 155/608 (25%), Positives = 288/608 (47%), Gaps = 17/608 (2%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMI-HL 168
L+ LR E ++I R+ G P ++ ++ + D L R+M L
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G S T+ ++I+ F + G + ++ M + A L+N YC + A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
L +F+ ++EEGL+P+ V+++ ++ + K ++++A Y M+S IAP +V
Sbjct: 365 LD-------LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVL 417
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
+ ++ G K E + D S + + + + C G++D A F + M
Sbjct: 418 VHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMME 476
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLP 408
+KGI P++ +N+++ A+ R + A + M + GL P++ T S L+ G K
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 409 EAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFP-DAVAFSAY 467
AWD++ +M F N+V + +++G ++G A+ + L + K + ++++
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI 596
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
I+G K G D A + EMS G PN + SLI GFC +++ AL++ EM+ L
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE 587
D + +I+GFCK+ MK A F ++ GL+P++ YN+LI G+ + A +
Sbjct: 657 KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID 716
Query: 588 LVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC 647
L KM G+ D+ TY + G +N A+ + EL+ GIVP+ + + L+NG+
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLS 776
Query: 648 CDILDRAIIIAAKLL----KMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDF 703
+ A+K+L K PNV+ + +++ ++G + ++ E
Sbjct: 777 K---KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 704 DETSYKIM 711
D+T + ++
Sbjct: 834 DDTVFNLL 841
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 206/455 (45%), Gaps = 44/455 (9%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
+ +E RM+ V I PS + + + L+ + ++F D + N +
Sbjct: 398 KAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKIF 456
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDM 241
L FC+ G + S L +M + + YN ++ A+C + R IF
Sbjct: 457 LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC-------RMKNMDLARSIFSE 509
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
+ E+GL PN Y+ L++G+ K +D A + +M + + + V +N I++G CK G
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 302 MEDGDRLLRDLSVSGLLP-NCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFN 360
+L++L +CT Y+ + G G D A+E + +M E G SP++ F
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 361 SIIAAYSRAGLEENAFE--------------------------------AYKI---MHQF 385
S+I + ++ + A E AY + + +
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 386 GLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGA 445
GL P+ +SL+ G G++ A DL KM+ G + +T ++DG + G++ A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 446 QSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAG 505
L++EL I PD + +NGLSK G +A + EM + PN Y+++IAG
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 506 FCNRGKLNEALKLEREMRQKGLLPDNFTFNIIING 540
G LNEA +L EM +KG++ D+ FN++++G
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 219/493 (44%), Gaps = 39/493 (7%)
Query: 254 YNALLNGYVKARD-----------------------------------IDQANMLYEEMR 278
+N LLN Y++ + ID+A +Y +M
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 279 SRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLD 338
+A D VT +++ + E+ ++ R + G P+ L+ + V C L
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 339 EAMEFFEDMFEK-GISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
A++ +M K G+ S + S+I A+ + G E A M FG+ S +SL
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
+ G CK L +A DL +M E+G +KV F+V+++ + + ++ A + + +I
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 458 FPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALK 517
P +V I G KA + A +F + S ++ + F N + FC +GK++ A
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATS 470
Query: 518 LEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYC 577
+ M QKG+ P+ +N ++ C+ M A F +M GL P+ TY+ LI G+
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 578 KALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTV 637
K D A +++N+M A + + YN ++G C + + ++A ML L+ +
Sbjct: 531 KNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC 590
Query: 638 T-YNTLMNG-VCCDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQK 695
T YN++++G V D A+ ++ + PNVVT L++ FCK + L +
Sbjct: 591 TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE 650
Query: 696 LSEISFDFDETSY 708
+ + D +Y
Sbjct: 651 MKSMELKLDLPAY 663
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 155/308 (50%), Gaps = 12/308 (3%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRM-REVGIMPSESAITILFKSLLRVGDYGSV 158
F ++ + + +++G +V +++ E+L + +E S ++ + ++VGD S
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 159 WKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINA 218
+ +R+M G P+ TF +LI GFC++ + + + H M D AY LI+
Sbjct: 610 VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
Query: 219 YCIRG--QTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEE 276
+C + +T+Y L F + E GL PNV VYN+L++G+ +D A LY++
Sbjct: 670 FCKKNDMKTAYTL---------FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 277 MRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGR 336
M + I+ D T+ ++ G K G + L +L G++P+ L+ + V GL G+
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 337 LDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSS 396
+A + E+M +K ++P++ ++++IA + R G AF + M + G+ +
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840
Query: 397 LLVGLCKK 404
L+ G +K
Sbjct: 841 LVSGRVEK 848
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 421 GFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEA 480
GF + AF LL+ Y R + A + + RK+ P + ++ L ++ L+DEA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 481 YGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIING 540
++ +M IG +N L+ K EA+K+ R + +G PD F++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 541 FCKQGRMKPAIDAFMDMY-RTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
CK + A+D +M + G+ TY ++I + K ++ A ++++M G+
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDI-LDRAIIIA 658
+ ++GYC ++ +A + + + G+ P+ V ++ ++ C ++ +++AI
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 659 AKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTL 690
++ + P+ V + ++ K PE L
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/248 (17%), Positives = 97/248 (39%), Gaps = 37/248 (14%)
Query: 489 RIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMK 548
R GF A+N L+ + +++ A+ M + ++P N +++ + +
Sbjct: 162 RFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLID 221
Query: 549 PAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRM 608
A + + M G+ D VT L+ + A ++ ++ + G +PD +++ +
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281
Query: 609 HGYCNIR------------------------------------KMNQAAMMLDELVSAGI 632
C M +A ++DE+V GI
Sbjct: 282 QAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI 341
Query: 633 VPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLL 691
+ + +L+NG C + L +A+ + ++ + P+ V +V++ FCK EK +
Sbjct: 342 PMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401
Query: 692 WGQKLSEI 699
+ ++ +
Sbjct: 402 FYMRMKSV 409
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/625 (25%), Positives = 292/625 (46%), Gaps = 16/625 (2%)
Query: 102 SDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSE-SAITILFKSLLRVGDYGSVWK 160
S +R+L++L+ G RV++ A+ + L R GI PS SA + +L G+
Sbjct: 183 SVYRMLNSLI-GSDRVDLIADHFDKLCRG---GIEPSGVSAHGFVLDALFCKGEVTKALD 238
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
R ++ G R + N ++ G + I + LL ++ + + LIN +C
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
RG+ A +F ++++ G+ P+++ Y+ L++GY KA + + L+ + +
Sbjct: 298 KRGEMDRAFD-------LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
+ D V F+ + + K G + + + + G+ PN Y I + GLC GR+ EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
+ + ++G+ PSI ++S+I + + G + F Y+ M + G P L+ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
L K+G + A KM+ + +N V F L+DG+ R+ A ++ + I PD
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
F+ + G ++EA +F M ++G P+ AY +LI FC K L+L
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
M++ + D N++I+ K R++ A F ++ + PDIVTYNT+I GYC
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYN 640
+ A+ + + P+ T I +H C M+ A M + G PN VTY
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 641 TLMNGVCCDI-LDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQG-MPEKTLLWGQKLSE 698
LM+ + ++ + + ++ + P++V+ ++++ CK+G + E T ++ Q + +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-D 769
Query: 699 ISFDFDETSYKIMDRAYHNIQENAE 723
D +Y I+ R Y + E
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVE 794
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 265/568 (46%), Gaps = 48/568 (8%)
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAY 219
+L ++ GP P+ TF LI GFC+ G + L VM + D AY+ LI+ Y
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 220 CIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRS 279
+ G G G +F +G+ +VVV+++ ++ YVK+ D+ A+++Y+ M
Sbjct: 332 -------FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 280 RDIAPDAVTFNIIVSG-----------------------------------HCKYGGMED 304
+ I+P+ VT+ I++ G CK G +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 305 GDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIA 364
G L D+ G P+ +Y + V GL G + AM F M + I ++ FNS+I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 365 AYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPI 424
+ R + A + +++M +G+ P T ++++ +GRL EA L +M + G
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 425 NKVAFTVLLDGYFR-IGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGV 483
+ +A+ L+D + + + IG Q L++ + R KI D + I+ L K +++A
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQ-LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 484 FLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCK 543
F + P+ YN++I G+C+ +L+EA ++ ++ P+ T I+I+ CK
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 544 QGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITT 603
M AI F M G P+ VTY L+ + K++DI + +L +M G+ P I +
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 604 YNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDRAIIIAAKLLK 663
Y+I + G C ++++A + + + A ++P+ V Y L+ G C ++ A LL
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC----KVGRLVEAALLY 799
Query: 664 MAFVPNVVTTNVLLSHFCKQGMPEKTLL 691
+ N V + LL + P K L+
Sbjct: 800 EHMLRNGVKPDDLLQRALSEYNPPKWLM 827
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 229/506 (45%), Gaps = 23/506 (4%)
Query: 103 DFRVLDALLHGYLRVEM----SAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSV 158
D L+ GY + M + L++ ++ ++ S I + KS GD +
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS----GDLATA 375
Query: 159 WKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINA 218
+++ M+ G P+ T+ LI G C++G I + + K Y+ LI+
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 219 YCIRGQTSYALGKCGAGRMIF----DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLY 274
+C KCG R F DMI+ G P+VV+Y L++G K + A
Sbjct: 436 FC----------KCGNLRSGFALYEDMIKM-GYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 275 EEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWA 334
+M + I + V FN ++ G C+ ++ ++ R + + G+ P+ + +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 335 GRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTC 394
GRL+EA+ F MF+ G+ P A+ ++I A+ + + + +M + ++ C
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 395 SSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNR 454
+ ++ L K R+ +A +IE + V + ++ GY + L A+ ++ L
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 455 RKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNE 514
P+ V + I+ L K +D A +F M+ G PN Y L+ F +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 515 ALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIG 574
+ KL EM++KG+ P +++III+G CK+GR+ A + F L+PD+V Y LI
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 575 GYCKALDIVRADELVNKMYAGGLDPD 600
GYCK +V A L M G+ PD
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 211/468 (45%), Gaps = 48/468 (10%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D V + + Y++ A + RM GI P+ TIL K L + G + ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
++ G PS T+++LI GFC+ G +R G +L M K D Y +L++ +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G +A+ R M+ + + NVVV+N+L++G+ + D+A ++ M I
Sbjct: 475 GLMLHAM------RFSVKMLGQS-IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPN----CTLYD------------- 325
PD TF ++ G +E+ L + GL P+ CTL D
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 326 ------------------ITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAY- 366
+ + L R+++A +FF ++ E + P I +N++I Y
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 367 --SRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPI 424
R E FE K+ FG P++ T + L+ LCK + A + M EKG
Sbjct: 648 SLRRLDEAERIFELLKVT-PFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 425 NKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVF 484
N V + L+D + + D+ G+ L+ E+ + I P V++S I+GL K G VDEA +F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 485 LEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNF 532
+ +P+ AY LI G+C G+L EA L M + G+ PD+
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 150/375 (40%), Gaps = 119/375 (31%)
Query: 427 VAFTVLLDGYFRIGDLIGAQSLWNE---------LNRRKIFPDAVAFSAYINGLSKAGLV 477
+A ++ +G F + D + + + N + R + D F + + G+V
Sbjct: 105 IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMV 162
Query: 478 DEAYGVFLEMSRIGFV-PNNFAY---NSLI------------------------------ 503
D+A +F+ +++G V P + Y NSLI
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGF 222
Query: 504 ---AGFCNRGKLNEALKLEREMRQKGL--------------------------------- 527
A FC +G++ +AL R + ++G
Sbjct: 223 VLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 528 -LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKA------- 579
P+ TF +INGFCK+G M A D F M + G+ PD++ Y+TLI GY KA
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 580 ------------LDIV----------------RADELVNKMYAGGLDPDITTYNIRMHGY 611
LD+V A + +M G+ P++ TY I + G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 612 CNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNV 670
C ++ +A M +++ G+ P+ VTY++L++G C C L + ++KM + P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 671 VTTNVLLSHFCKQGM 685
V VL+ KQG+
Sbjct: 462 VIYGVLVDGLSKQGL 476
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/606 (26%), Positives = 277/606 (45%), Gaps = 44/606 (7%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
L+ LR E AE +E+L R E G P ++ ++ + D L R+M
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298
Query: 170 P-RPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
PS T+ ++IL + G + L M + A LI +C A
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
L ++FD +++EG SPN V ++ L+ + K ++++A Y++M + P
Sbjct: 359 L-------VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFH 411
Query: 289 FNIIVSGH----------------------------------CKYGGMEDGDRLLRDLSV 314
+ I+ G CK G ++ LL +
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 315 SGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEEN 374
G+ PN Y+ + G C +D A F ++ EKG+ P+ + ++ +I R E+N
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 375 AFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE-KGFPINKVAFTVLL 433
A E M + + +++ GLCK G+ +A +LL MIE K ++ +++ ++
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 434 DGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFV 493
DG+F+ G++ A + + E+ I P+ + +++ +NGL K +D+A + EM G
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 494 PNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDA 553
+ AY +LI GFC R + A L E+ ++GL P +N +I+GF G M A+D
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 554 FMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCN 613
+ M + GL D+ TY TLI G K +++ A EL +M A GL PD Y + ++G
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 614 IRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVT 672
+ + M +E+ + PN + YN ++ G + LD A + ++L +P+ T
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Query: 673 TNVLLS 678
++L+S
Sbjct: 832 FDILVS 837
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 153/638 (23%), Positives = 285/638 (44%), Gaps = 52/638 (8%)
Query: 89 MVEFMCDDFHLFGSDF--RVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILF 146
+V + D FG + R + LL+ Y + + ++I+ +M E+ ++P +
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205
Query: 147 KSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCV 206
+L++ +L+ M+ +G N T L+ R +L +
Sbjct: 206 SALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE 265
Query: 207 ADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARD 266
D Y++ + A C L A ++ +M +++ P+ Y +++ VK +
Sbjct: 266 PDSLLYSLAVQACC------KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGN 319
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDI 326
+D A L +EM S I+ + V +++GHCK + L + G PN + +
Sbjct: 320 MDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSV 379
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
+ G +++A+EF++ M G++PS+F ++II + + E A + + + G
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKM----------------------------- 417
L + C+++L LCK+G+ EA +LL KM
Sbjct: 440 LA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498
Query: 418 ------IEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGL 471
+EKG N +++L+DG FR D A + N + I + V + INGL
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Query: 472 SKAGLVDEAYGVFLEM-SRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPD 530
K G +A + M + +YNS+I GF G+++ A+ EM G+ P+
Sbjct: 559 CKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 531 NFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVN 590
T+ ++NG CK RM A++ +M G+ DI Y LI G+CK ++ A L +
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 591 KMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDI 650
++ GL+P YN + G+ N+ M A + +++ G+ + TY TL++G+ +
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL---L 735
Query: 651 LDRAIIIAAKLLK----MAFVPNVVTTNVLLSHFCKQG 684
D +I+A++L + VP+ + V+++ K+G
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 264/518 (50%), Gaps = 14/518 (2%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
+L+ G+ + + + +M + G P+ ++L + + G+ + ++ M L
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKY--MCVADFFAYNILINAYCIRGQTS 226
G PS + + +I G+ + + E L + + +A+ F N +++ C +G+T
Sbjct: 404 GLTPSVFHVHTIIQGWLKG---QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTD 460
Query: 227 YALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDA 286
A + ++ G+ PNVV YN ++ G+ + +++D A +++ + + + P+
Sbjct: 461 EATE-------LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 287 VTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFED 346
T++I++ G + ++ ++ ++ S + N +Y + GLC G+ +A E +
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 347 MFE-KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
M E K + S ++NSII + + G ++A AY+ M G++P+ T +SL+ GLCK
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNN 633
Query: 406 RLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFS 465
R+ +A ++ +M KG ++ A+ L+DG+ + ++ A +L++EL + P ++
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 466 AYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQK 525
+ I+G G + A ++ +M + G + Y +LI G G L A +L EM+
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 526 GLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRA 585
GL+PD + +I+NG K+G+ + F +M + + P+++ YN +I G+ + ++ A
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 586 DELVNKMYAGGLDPDITTYNIRMHGYC-NIRKMNQAAM 622
L ++M G+ PD T++I + G N++ + A++
Sbjct: 814 FRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 238/529 (44%), Gaps = 14/529 (2%)
Query: 211 AYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQA 270
A+N L+NAY QT +A+ I + + E + P N L+ V+ + +A
Sbjct: 165 AFNYLLNAYSKDRQTDHAVD-------IVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 271 NMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAG 330
LY M + + D VT +++ + + +L G P+ LY + V
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 331 LCWAGRLDEAMEFFEDMFEKGIS-PSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTP 389
C L A +M EK + PS + S+I A + G ++A M G++
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 390 SSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLW 449
+ +SL+ G CK L A L KM ++G N V F+VL++ + + G++ A +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 450 NELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNR 509
++ + P I G K +EA +F E G N F N++++ C +
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQ 456
Query: 510 GKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTY 569
GK +EA +L +M +G+ P+ ++N ++ G C+Q M A F ++ GL P+ TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 570 NTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVS 629
+ LI G + D A E+VN M + ++ + Y ++G C + + ++A +L ++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 630 AG-IVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPE 687
+ + ++YN++++G + +D A+ ++ PNV+T L++ CK +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 688 KTLLWGQKLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKSL 733
+ L ++ D +Y + + N++ + F E E+ L
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 20/291 (6%)
Query: 410 AWDLLCKMIEKG--FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAY 467
A DLL + + P+ V + L+D A+S E+N R AF+
Sbjct: 126 ASDLLIRYVSTSNPTPMASVLVSKLVDS---------AKSFGFEVNSR-------AFNYL 169
Query: 468 INGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGL 527
+N SK D A + +M + +P N ++ R L EA +L M G+
Sbjct: 170 LNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGV 229
Query: 528 LPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADE 587
DN T +++ ++ + A++ G PD + Y+ + CK LD+ A+
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 588 LVNKMYAGGL-DPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV 646
L+ +M L P TY + M+ A + DE++S GI N V +L+ G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 647 C-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKL 696
C + L A+++ K+ K PN VT +VL+ F K G EK L + +K+
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM 400
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D AL+ G+ + + + E G+ PS+ L +G+ + L+
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
+ M+ G R T+ LI G ++G + + L M V D Y +++N +
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
GQ + +F+ +++ ++PNV++YNA++ G+ + ++D+A L++EM + I
Sbjct: 773 GQFVKVVK-------MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 283 APDAVTFNIIVSGH 296
PD TF+I+VSG
Sbjct: 826 LPDGATFDILVSGQ 839
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 188/336 (55%), Gaps = 2/336 (0%)
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
I + G NV V+N L+N + K +I A +++E+ R + P V+FN +++G+CK G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
+++G RL + S P+ Y + LC ++D A F++M ++G+ P+ F +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
+I +SR G + E+Y+ M GL P ++L+ G CK G L A +++ MI +G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
+K+ +T L+DG+ R GD+ A + E+++ I D V FSA + G+ K G V +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
EM R G P++ Y ++ FC +G KL +EM+ G +P T+N+++NG
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 542 CKQGRMKPAIDAFMD-MYRTGLVPDIVTYNTLIGGY 576
CK G+MK A D +D M G+VPD +TYNTL+ G+
Sbjct: 531 CKLGQMKNA-DMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 182/331 (54%)
Query: 315 SGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEEN 374
+G N +++I + C G + +A + F+++ ++ + P++ +FN++I Y + G +
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 375 AFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLD 434
F M + P T S+L+ LCK+ ++ A L +M ++G N V FT L+
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 435 GYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVP 494
G+ R G++ + + ++ + + PD V ++ +NG K G + A + M R G P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 495 NNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAF 554
+ Y +LI GFC G + AL++ +EM Q G+ D F+ ++ G CK+GR+ A A
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 555 MDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNI 614
+M R G+ PD VTY ++ +CK D +L+ +M + G P + TYN+ ++G C +
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 615 RKMNQAAMMLDELVSAGIVPNTVTYNTLMNG 645
+M A M+LD +++ G+VP+ +TYNTL+ G
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 188/366 (51%), Gaps = 8/366 (2%)
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
FNI+++ CK G + D ++ +++ L P ++ + G C G LDE M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLP 408
+ P +F ++++I A + + A + M + GL P+ ++L+ G + G +
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 409 EAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYI 468
+ KM+ KG + V + L++G+ + GDL+ A+++ + + RR + PD + ++ I
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 469 NGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
+G + G V+ A + EM + G + +++L+ G C G++ +A + REM + G+
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 529 PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADEL 588
PD+ T+ ++++ FCK+G + +M G VP +VTYN L+ G CK + AD L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 589 VNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC 648
++ M G+ PD TYN + G+ R N + + + GIV + +Y +++N
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHH--RHANSSKRYIQK-PEIGIVADLASYKSIVNE--- 596
Query: 649 DILDRA 654
LDRA
Sbjct: 597 --LDRA 600
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 230/513 (44%), Gaps = 20/513 (3%)
Query: 32 RETAFAFFKLVVCDDS-ESTIRSCCIAAHIFAAEDLRLLAQDVVTWVISRIGAGRSKH-- 88
+ + FAFFK + T+ + + A A ++ AQ ++ V+SR G +
Sbjct: 98 QRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVF 157
Query: 89 --MVEFMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILF 146
+VE F ++DAL+ Y + + ++ R+ L
Sbjct: 158 ISLVEMRVTPMCGF-----LVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLL 212
Query: 147 KSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCV 206
++++ G++W + +++ G + Y FN L+ FC+ G I + + + K
Sbjct: 213 DRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQ 272
Query: 207 ADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARD 266
++N LIN YC +G G + +++ P+V Y+AL+N K
Sbjct: 273 PTVVSFNTLINGYC-------KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK 325
Query: 267 IDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDI 326
+D A+ L++EM R + P+ V F ++ GH + G ++ + + GL P+ LY+
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 327 TVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFG 386
V G C G L A + M +G+ P + ++I + R G E A E K M Q G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 387 LTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQ 446
+ S+L+ G+CK+GR+ +A L +M+ G + V +T+++D + + GD
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 447 SLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGF 506
L E+ P V ++ +NGL K G + A + M IG VP++ YN+L+ G
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Query: 507 CNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
++ + E+ G++ D ++ I+N
Sbjct: 566 HRHANSSKRYIQKPEI---GIVADLASYKSIVN 595
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 207/440 (47%), Gaps = 43/440 (9%)
Query: 338 DEAMEFFEDMFEKGISPSI-FAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSS 396
+ A F + E ++P F ++++ Y+ G +A + +++ + C +
Sbjct: 151 NSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGN 210
Query: 397 LLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRK 456
LL + K W ++++ GFP+N F +L++ + + G++ AQ +++E+ +R
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 457 IFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEAL 516
+ P V+F+ ING K G +DE + + +M + P+ F Y++LI C K++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 517 KLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGY 576
L EM ++GL+P++ F +I+G + G + +++ M GL PDIV YNTL+ G+
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 577 CKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYC---------NIRK-MNQAAMMLD- 625
CK D+V A +V+ M GL PD TY + G+C IRK M+Q + LD
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 626 ------------------------ELVSAGIVPNTVTYNTLMNGVCCDILDRAIIIAAKL 661
E++ AGI P+ VTY +M+ C KL
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC---KKGDAQTGFKL 507
Query: 662 LKM----AFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDRAYHN 717
LK VP+VVT NVLL+ CK G + + + I D+ +Y + +H
Sbjct: 508 LKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHR 567
Query: 718 IQENAEFFQETSEKSLFLDF 737
+++ + + E + D
Sbjct: 568 HANSSKRYIQKPEIGIVADL 587
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 192/377 (50%), Gaps = 8/377 (2%)
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
F+ ++ + G +++ FN ++ + + G +A + + + + L P+ + ++L+ G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
K G L E + L +M + + ++ L++ + + GA L++E+ +R + P+ V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREM 522
F+ I+G S+ G +D + +M G P+ YN+L+ GFC G L A + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 523 RQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDI 582
++GL PD T+ +I+GFC+ G ++ A++ +M + G+ D V ++ L+ G CK +
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 583 VRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTL 642
+ A+ + +M G+ PD TY + M +C +L E+ S G VP+ VTYN L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 643 MNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISF 701
+NG+C + A ++ +L + VP+ +T N LL + K + QK EI
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI--QK-PEIGI 583
Query: 702 DFDETSYKI----MDRA 714
D SYK +DRA
Sbjct: 584 VADLASYKSIVNELDRA 600
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 276/582 (47%), Gaps = 38/582 (6%)
Query: 139 ESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTF--NALILGFCRNGCIRIGESL 196
+S ++ + +S GD+ SV KL + R N + I+ F G + +
Sbjct: 77 DSTLSSMIESYANSGDFDSVEKLLSRI-----RLENRVIIERSFIVVFRAYGKAHLPDKA 131
Query: 197 LHVMHK----YMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGL----S 248
+ + H+ + C ++N ++N G L +D + + S
Sbjct: 132 VDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLE-------FYDYVVNSNMNMNIS 184
Query: 249 PNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRL 308
PN + +N ++ K R +D+A ++ M R PD T+ ++ G CK +++ L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 309 LRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSR 368
L ++ G P+ +Y++ + GLC G L + ++MF KG P+ +N++I
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 369 AGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVA 428
G + A + M P+ T +L+ GL K+ R +A LL M E+G+ +N+
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 429 FTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMS 488
++VL+ G F+ G A SLW ++ + P+ V +S ++GL + G +EA + M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 489 RIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMK 548
G +PN + Y+SL+ GF G EA+++ +EM + G + F ++++I+G C GR+K
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 549 PAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAG---GLDPDITTYN 605
A+ + M G+ PD V Y+++I G C + A +L ++M PD+ TYN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 606 IRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV-----CCDILDRAII--IA 658
I + G C + +++A +L+ ++ G P+ +T NT +N + CD R+ + +
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD-KGRSFLEELV 603
Query: 659 AKLLKMAFVPNVVT-TNVLLSHFCKQGMPEKTLLWGQKLSEI 699
+LLK V T V+L + + KT W + EI
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKY----LAPKTSTWAMIVREI 641
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 217/491 (44%), Gaps = 24/491 (4%)
Query: 133 VGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRI 192
+ I P+ + ++ K+L ++ ++FR M P YT+ L+ G C+ I
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 193 GESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVV 252
LL M C YN+LI+ C +G + + D + +G PN V
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK-------LVDNMFLKGCVPNEV 293
Query: 253 VYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDL 312
YN L++G +D+A L E M S P+ VT+ +++G K D RLL +
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 313 SVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLE 372
G N +Y + ++GL G+ +EAM + M EKG P+I ++ ++ R G
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 373 ENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVL 432
A E M G P++ T SSL+ G K G EA + +M + G NK ++VL
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 433 LDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEM---SR 489
+DG +G + A +W+++ I PD VA+S+ I GL G +D A ++ EM
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 490 IGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKP 549
P+ YN L+ G C + ++ A+ L M +G PD T N +N ++
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
Query: 550 AIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMH 609
+F++ L+ + G C +++ M L P +T+ + +
Sbjct: 594 KGRSFLEELVVRLLK-----RQRVSGACTIVEV---------MLGKYLAPKTSTWAMIVR 639
Query: 610 GYCNIRKMNQA 620
C +K+N A
Sbjct: 640 EICKPKKINAA 650
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 199/448 (44%), Gaps = 26/448 (5%)
Query: 109 ALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHL 168
L+ G + E E + +L M+ G PS +L L + GD V KL +M
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 169 GPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYA 228
G P+ T+N LI G C G + SLL M C+ + Y LIN + + + A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 229 LGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVT 288
+ R++ M +E G N +Y+ L++G K ++A L+ +M + P+ V
Sbjct: 347 V------RLLSSM-EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 289 FNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMF 348
++++V G C+ G + +L + SG LPN Y + G G +EA++ +++M
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 349 EKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLP 408
+ G S + F ++ +I G + A + M G+ P + SS++ GLC G +
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 409 EAW----DLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAF 464
A ++LC+ K P + V + +LLDG D+ A L N + R PD +
Sbjct: 520 AALKLYHEMLCQEEPKSQP-DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 465 SAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQ 524
+ ++N LS+ + FLE L+ R +++ A + M
Sbjct: 579 NTFLNTLSEKSNSCDKGRSFLE--------------ELVVRLLKRQRVSGACTIVEVMLG 624
Query: 525 KGLLPDNFTFNIIINGFCKQGRMKPAID 552
K L P T+ +I+ CK ++ AID
Sbjct: 625 KYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 14/301 (4%)
Query: 421 GFPINKVAFTVLLDGYFRIGDLIGAQSLWNE--LNRRKIFPDA--VAFSAYINGLSKAGL 476
F + + +++ Y GD + L + L R I + V F AY KA L
Sbjct: 72 SFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY----GKAHL 127
Query: 477 VDEAYGVFLEM-SRIGFVPNNFAYNSLIAGFCNRGKLNEALK----LEREMRQKGLLPDN 531
D+A +F M + ++NS++ N G + L+ + + P+
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 532 FTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNK 591
+FN++I CK + AI+ F M +PD TY TL+ G CK I A L+++
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 592 MYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-I 650
M + G P YN+ + G C + + ++D + G VPN VTYNTL++G+C
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 651 LDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKI 710
LD+A+ + +++ +PN VT L++ KQ + + E + ++ Y +
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 711 M 711
+
Sbjct: 368 L 368
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 133/347 (38%), Gaps = 73/347 (21%)
Query: 97 FHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYG 156
+HL + + L+ G + + E M + +M E G P+ ++L L R G
Sbjct: 358 YHL---NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 157 SVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILI 216
++ MI G P+ YT+++L+ GF + G + M K C + F Y++LI
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 217 NAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEE 276
+ C G+ A+ M++ + G+ P+ V Y++++ G +D A LY E
Sbjct: 475 DGLCGVGRVKEAM-------MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 277 MRSRD---IAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCW 333
M ++ PD VT+NI++ GLC
Sbjct: 528 MLCQEEPKSQPDVVTYNILLD-----------------------------------GLCM 552
Query: 334 AGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYS---------RAGLEENAFEAYKIMHQ 384
+ A++ M ++G P + N+ + S R+ LEE K
Sbjct: 553 QKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRV 612
Query: 385 FG------------LTPSSCTCSSLLVGLCKKGRLPEA----WDLLC 415
G L P + T + ++ +CK ++ A W LC
Sbjct: 613 SGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLC 659
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 205/405 (50%)
Query: 242 IQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGG 301
I E+ P+V YNAL+NG+ K ID A + + MRS+D +PD VT+NI++ C G
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 302 MEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNS 361
++ ++L L P Y I + G +DEA++ ++M +G+ P +F +N+
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 362 IIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKG 421
II + G+ + AFE + + G P + + LL L +G+ E L+ KM +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 422 FPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAY 481
N V +++L+ R G + A +L + + + PDA ++ I + G +D A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 482 GVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGF 541
M G +P+ YN+++A C GK ++AL++ ++ + G P++ ++N + +
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 542 CKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDI 601
G A+ ++M G+ PD +TYN++I C+ + A EL+ M + P +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 602 TTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV 646
TYNI + G+C ++ A +L+ +V G PN TY L+ G+
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 231/482 (47%), Gaps = 9/482 (1%)
Query: 238 IFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHC 297
+ + + +G +P+V++ L+ G+ R+I +A + E + PD +N +++G C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 298 KYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIF 357
K ++D R+L + P+ Y+I + LC G+LD A++ + P++
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 358 AFNSIIAAYSRAGLEENAFEAYKIMHQF---GLTPSSCTCSSLLVGLCKKGRLPEAWDLL 414
+ +I A LE EA K+M + GL P T ++++ G+CK+G + A++++
Sbjct: 230 TYTILIEA---TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV 286
Query: 415 CKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKA 474
+ KG + +++ +LL G + L ++ K P+ V +S I L +
Sbjct: 287 RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD 346
Query: 475 GLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTF 534
G ++EA + M G P+ ++Y+ LIA FC G+L+ A++ M G LPD +
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 406
Query: 535 NIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYA 594
N ++ CK G+ A++ F + G P+ +YNT+ + D +RA ++ +M +
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 595 GGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDR 653
G+DPD TYN + C +++A +L ++ S P+ VTYN ++ G C ++
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 654 AIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIMDR 713
AI + ++ PN T VL+ G + + L I E S+K + R
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID-AISEYSFKRLHR 585
Query: 714 AY 715
+
Sbjct: 586 TF 587
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 219/483 (45%), Gaps = 8/483 (1%)
Query: 110 LLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLG 169
+ H R E + +L M G P T L K + + ++ + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 170 PRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYAL 229
+P + +NALI GFC+ I +L M D YNI+I + C RG+ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 230 GKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTF 289
+ + + + P V+ Y L+ + +D+A L +EM SR + PD T+
Sbjct: 214 K-------VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 290 NIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFE 349
N I+ G CK G ++ ++R+L + G P+ Y+I + L G+ +E + MF
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 350 KGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPE 409
+ P++ ++ +I R G E A K+M + GLTP + + L+ C++GRL
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 410 AWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYIN 469
A + L MI G + V + +L + G A ++ +L P++ +++ +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 470 GLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLP 529
L +G A + LEM G P+ YNS+I+ C G ++EA +L +MR P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 530 DNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELV 589
T+NI++ GFCK R++ AI+ M G P+ TY LI G A A EL
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 590 NKM 592
N +
Sbjct: 567 NDL 569
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 202/470 (42%), Gaps = 49/470 (10%)
Query: 100 FGS-DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSV 158
FG D +AL++G+ ++ + +L RMR P I+ SL G
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 159 WKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINA 218
K+ ++ +P+ T+ LI G + L+ M D F YN +I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 219 YCIRGQTSYALGKCGAGRMIFDMIQE---EGLSPNVVVYNALLNGYVKARDIDQANMLYE 275
C G A F+M++ +G P+V+ YN LL + ++ L
Sbjct: 273 MCKEGMVDRA----------FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 276 EMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAG 335
+M S P+ VT++I+++ C+ G +E+ LL+ + GL P+ YD +A C G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
RLD A+EF E M G P I +N+++A + G + A E + + + G +P+S + +
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
++ L G A ++ +M+ G
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNG---------------------------------- 468
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
I PD + +++ I+ L + G+VDEA+ + ++M F P+ YN ++ GFC ++ +A
Sbjct: 469 -IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPD 565
+ + M G P+ T+ ++I G G A++ D+ R + +
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 507 CNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDI 566
C G E+L L M +KG PD +I GF + A+ + + G PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 567 VTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDE 626
YN LI G+CK I A ++++M + PD TYNI + C+ K++ A +L++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 627 LVSAGIVPNTVTYNTLMNGVCCDI-LDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGM 685
L+S P +TY L+ + +D A+ + ++L P++ T N ++ CK+GM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 686 PEKTLLWGQKLSEISFDFDETSYKIMDRAYHN 717
++ + L + D SY I+ RA N
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 212/422 (50%), Gaps = 1/422 (0%)
Query: 249 PNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRL 308
P+++ + LL+ K D L+E+M+ I P T NI++ C
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 309 LRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSR 368
L + G P+ + + G C R+++A+ F+ + G P++ + ++I +
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 369 AGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVA 428
+A E + M G P+ T ++L+ GLC+ GR +A LL M+++ N +
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 429 FTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMS 488
FT L+D + ++G L+ A+ L+N + + ++PD + + INGL GL+DEA +F M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 489 RIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMK 548
R G PN Y +LI GFC ++ + +K+ EM QKG++ + T+ ++I G+C GR
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 549 PAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRM 608
A + F M PDI TYN L+ G C + +A + M +D +I TY I +
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 609 HGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFV 667
G C + K+ A + L S G+ PN +TY T+++G C ++ A + K+ + F+
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 668 PN 669
PN
Sbjct: 501 PN 502
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 219/463 (47%), Gaps = 11/463 (2%)
Query: 146 FKSLLRVG----DYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMH 201
++ +LR G + LF M+H P PS F L+ + + SL M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 202 KYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGY 261
NI+++ C+ Q A C G+M+ + G P++V + +LLNGY
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRA--SCFLGKMM-----KLGFEPDLVTFTSLLNGY 163
Query: 262 VKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNC 321
I+ A L++++ P+ VT+ ++ CK + L + +G PN
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 322 TLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKI 381
Y+ V GLC GR +A DM ++ I P++ F ++I A+ + G A E Y +
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 382 MHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGD 441
M Q + P T SL+ GLC G L EA + M G N+V +T L+ G+ +
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 442 LIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNS 501
+ ++ E++++ + + + ++ I G G D A VF +MS P+ YN
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 502 LIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTG 561
L+ G C GK+ +AL + MR++ + + T+ III G CK G+++ A D F ++ G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 562 LVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTY 604
+ P+++TY T+I G+C+ I AD L KM G P+ + Y
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 215/454 (47%), Gaps = 2/454 (0%)
Query: 257 LLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSG 316
L NG + D ++ + SR + P + F ++S K + L + + G
Sbjct: 55 LRNGLHNLQFNDALDLFTRMVHSRPL-PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 317 LLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAF 376
+ P +I + +C + + A F M + G P + F S++ Y E+A
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 377 EAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGY 436
+ + G P+ T ++L+ LCK L A +L +M G N V + L+ G
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 437 FRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNN 496
IG A L ++ +R+I P+ + F+A I+ K G + EA ++ M ++ P+
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 497 FAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMD 556
F Y SLI G C G L+EA ++ M + G P+ + +I+GFCK R++ + F +
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 557 MYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRK 616
M + G+V + +TY LI GYC A E+ N+M + PDI TYN+ + G C K
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 617 MNQAAMMLDELVSAGIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNV 675
+ +A M+ + + + N VTY ++ G+C ++ A + L PNV+T
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 676 LLSHFCKQGMPEKTLLWGQKLSEISFDFDETSYK 709
++S FC++G+ + +K+ E F +E+ YK
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 184/379 (48%), Gaps = 5/379 (1%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+ ++A++ F M PSI F +++ ++ + ++ M G+ P CTC+
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
++ +C + A L KM++ GF + V FT LL+GY + A +L++++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
P+ V ++ I L K ++ A +F +M G PN YN+L+ G C G+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
L R+M ++ + P+ TF +I+ F K G++ A + + M + + PD+ TY +LI G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C + A ++ M G P+ Y +HG+C +++ + E+ G+V N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 636 TVTYNTLMNGVCCDILDRAIIIAAKLLKMA---FVPNVVTTNVLLSHFCKQGMPEKTLLW 692
T+TY L+ G C ++ R + +M+ P++ T NVLL C G EK L+
Sbjct: 363 TITYTVLIQGYC--LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 693 GQKLSEISFDFDETSYKIM 711
+ + + D + +Y I+
Sbjct: 421 FEYMRKREMDINIVTYTII 439
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 177/374 (47%), Gaps = 9/374 (2%)
Query: 127 LYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCR 186
L +M ++G P T L LF ++ +G +P+ T+ LI C+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 187 NGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCG-AGRMIFDMIQEE 245
N + L + M + YN L+ C +G+ G A ++ DM++
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC-------EIGRWGDAAWLLRDMMKRR 253
Query: 246 GLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDG 305
+ PNV+ + AL++ +VK + +A LY M + PD T+ +++G C YG +++
Sbjct: 254 -IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 306 DRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAA 365
++ + +G PN +Y + G C + R+++ M+ F +M +KG+ + + +I
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 366 YSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPIN 425
Y G + A E + M P T + LL GLC G++ +A + M ++ IN
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 426 KVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFL 485
V +T+++ G ++G + A L+ L + + P+ + ++ I+G + GL+ EA +F
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 486 EMSRIGFVPNNFAY 499
+M GF+PN Y
Sbjct: 493 KMKEDGFLPNESVY 506
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 11/367 (2%)
Query: 100 FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVW 159
F D +LL+GY + + + ++ +G P+ T L + L +
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 160 KLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGES--LLHVMHKYMCVADFFAYNILIN 217
+LF M G RP+ T+NAL+ G C G R G++ LL M K + + LI+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIG--RWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 218 AYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEM 277
A+ +GK + +++++ + + P+V Y +L+NG +D+A ++ M
Sbjct: 267 AF-------VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 278 RSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRL 337
P+ V + ++ G CK +EDG ++ ++S G++ N Y + + G C GR
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 338 DEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSL 397
D A E F M + P I +N ++ G E A ++ M + + + T + +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 398 LVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKI 457
+ G+CK G++ +A+DL C + KG N + +T ++ G+ R G + A SL+ ++
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 458 FPDAVAF 464
P+ +
Sbjct: 500 LPNESVY 506
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 409 EAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYI 468
+A DL +M+ + + FT LL ++ SL+ ++ I P + +
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 469 NGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLL 528
+ + + A +M ++GF P+ + SL+ G+C+ ++ +A+ L ++ G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 529 PDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADEL 588
P+ T+ +I CK + A++ F M G P++VTYN L+ G C+ A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 589 VNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCC 648
+ M ++P++ T+ + + + K+ +A + + ++ + P+ TY +L+NG+C
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 649 -DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQKLSEISFDFDETS 707
+LD A + + + PN V L+ FCK E + ++S+ + +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 708 YKIMDRAY 715
Y ++ + Y
Sbjct: 366 YTVLIQGY 373
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 498 AYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDM 557
+Y ++ + + N+AL L M LP F +++ K R I F M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 558 YRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKM 617
G+ P + T N ++ C + RA + KM G +PD+ T+ ++GYC+ ++
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 618 NQAAMMLDELVSAGIVPNTVTYNTLMNGVCCD-ILDRAIIIAAKLLKMAFVPNVVTTNVL 676
A + D+++ G PN VTY TL+ +C + L+ A+ + ++ PNVVT N L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 677 LSHFCKQG 684
++ C+ G
Sbjct: 230 VTGLCEIG 237
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 216/439 (49%), Gaps = 10/439 (2%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF MI P PS F+ ++ ++ + SL H M D ++YNI+IN C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
+ AL G + + G P+VV ++L+NG+ + + A L +M
Sbjct: 116 RCSRFVIALSVVGK-------MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
PD V +N I+ G CK G + D L + G+ + Y+ VAGLC +GR +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
DM + I P++ F ++I + + G A + Y+ M + + P T +SL+ G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC GR+ EA +L M+ KG + V + L++G+ + + L+ E+ +R + D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+ ++ I G +AG D A +F SR+ PN Y+ L+ G C ++ +AL L
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
M++ + D T+NI+I+G CK G ++ A D F + GL PD+V+Y T+I G+C+
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 581 DIVRADELVNKMYAGGLDP 599
++D L KM GL P
Sbjct: 466 QWDKSDLLYRKMQEDGLLP 484
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 212/449 (47%), Gaps = 22/449 (4%)
Query: 122 EVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALI 181
E +++ +M + +PS + + + + +Y V LF M G Y++N +I
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 182 LGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDM 241
CR I S++ M K+ D + LIN +C G +FD
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC-------------QGNRVFDA 158
Query: 242 I------QEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSG 295
I +E G P+VV+YN +++G K ++ A L++ M + DAVT+N +V+G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 296 HCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPS 355
C G D RL+RD+ + ++PN + + G+ EAM+ +E+M + + P
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 356 IFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLC 415
+F +NS+I G + A + +M G P T ++L+ G CK R+ E L
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 416 KMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAG 475
+M ++G + + + ++ GYF+ G AQ +++ ++ R P+ +S + GL
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNW 395
Query: 476 LVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFN 535
V++A +F M + + YN +I G C G + +A L R + KGL PD ++
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 536 IIINGFCKQGRMKPAIDAFMDMYRTGLVP 564
+I+GFC++ + + + M GL+P
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 219/436 (50%), Gaps = 13/436 (2%)
Query: 268 DQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDIT 327
++ ++ + ++SR + P V F+ ++S K + L + V G+ + Y+I
Sbjct: 52 EEIDLFCKMIQSRPL-PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 328 VAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGL 387
+ LC R A+ M + G P + +S+I + + +A + M + G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 388 TPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQS 447
P ++++ G CK G + +A +L +M G + V + L+ G G A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 448 LWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFC 507
L ++ R I P+ + F+A I+ K G EA ++ EM+R P+ F YNSLI G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 508 NRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIV 567
G+++EA ++ M KG LPD T+N +INGFCK R+ F +M + GLV D +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 568 TYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDEL 627
TYNT+I GY +A A E+ ++M + P+I TY+I ++G C ++ +A ++ + +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 628 VSAGIVPNTVTYNTLMNGVCC-----DILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCK 682
+ I + TYN +++G+C D D ++ K LK P+VV+ ++S FC+
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK----PDVVSYTTMISGFCR 463
Query: 683 QGMPEKTLLWGQKLSE 698
+ +K+ L +K+ E
Sbjct: 464 KRQWDKSDLLYRKMQE 479
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 194/395 (49%), Gaps = 4/395 (1%)
Query: 318 LPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFE 377
LP+ + ++ + + D + F M GI ++++N +I R A
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 378 AYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYF 437
M +FG P T SSL+ G C+ R+ +A DL+ KM E GF + V + ++DG
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 438 RIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNF 497
+IG + A L++ + R + DAV +++ + GL +G +A + +M VPN
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 498 AYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDM 557
+ ++I F GK +EA+KL EM ++ + PD FT+N +ING C GR+ A M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 558 YRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKM 617
G +PD+VTYNTLI G+CK+ + +L +M GL D TYN + GY +
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 618 NQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDI-LDRAIIIAAKLLKMAFVPNVVTTNVL 676
+ A + + S PN TY+ L+ G+C + +++A+++ + K ++ T N++
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 677 LSHFCKQGMPEKTLLWGQKLSEISFDFDETSYKIM 711
+ CK G E + LS D SY M
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 198/420 (47%), Gaps = 12/420 (2%)
Query: 77 VISRIGAGRSKHMVEFMCDDFHL--FGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVG 134
V+S+I ++ +V + + G D + +++ R + ++ +M + G
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 135 IMPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGE 194
P ++ L + L M +G RP +N +I G C+ G +
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 195 SLLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVY 254
L M + AD YN L+ C G+ S A R++ DM+ + + PNV+ +
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWS------DAARLMRDMVMRD-IVPNVITF 247
Query: 255 NALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSV 314
A+++ +VK +A LYEEM R + PD T+N +++G C +G +++ ++L +
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 315 SGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEEN 374
G LP+ Y+ + G C + R+DE + F +M ++G+ +N+II Y +AG +
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 375 AFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLD 434
A E + M P+ T S LL GLC R+ +A L M + ++ + +++
Sbjct: 368 AQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 435 GYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVP 494
G +IG++ A L+ L+ + + PD V+++ I+G + D++ ++ +M G +P
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 222/475 (46%), Gaps = 42/475 (8%)
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
LF M+ P PS F+ L+ + + L M + NIL+N +C
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
Q S AL G+MI + G P++V + +LLNG+ + + A ++++M
Sbjct: 128 RCSQLSLALS--FLGKMI-----KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
P+ V +N I+ G CK +++ LL + G+ P+ Y+ ++GLC +GR +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
M ++ I P +F FN++I A + G A E Y+ M + L P T S L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
LC RL EA ++ M+ KG FPD
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKG-----------------------------------CFPD 325
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
V +S ING K+ V+ +F EMS+ G V N Y LI G+C GKLN A ++ R
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKAL 580
M G+ P+ T+N++++G C G+++ A+ DM + G+ DIVTYN +I G CKA
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 581 DIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
++ A ++ + GL PDI TY M G +A + ++ GI+PN
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 205/389 (52%), Gaps = 1/389 (0%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+LD++++ F M + PSI F+ +++A S+ + ++ M G+ + CTC+
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
LL C+ +L A L KMI+ G + V F LL+G+ R + A +++++
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
P+ V ++ I+GL K+ VD A + M + G P+ YNSLI+G C+ G+ ++A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
++ M ++ + PD FTFN +I+ K+GR+ A + + +M R L PDIVTY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
C + A+E+ M + G PD+ TY+I ++GYC +K+ + E+ G+V N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 636 TVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
TVTY L+ G C L+ A I +++ PN++T NVLL C G EK L+
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 695 KLSEISFDFDETSYKIMDRAYHNIQENAE 723
+ + D D +Y I+ R E A+
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 1/410 (0%)
Query: 237 MIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGH 296
+ F M+Q L P++ ++ LL+ K + D L+E+M+ I + T NI+++
Sbjct: 68 LFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 297 CKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSI 356
C+ + L + G P+ + + G C R+ +A+ F+ M G P++
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 357 FAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCK 416
+N+II ++ +NA + M + G+ P T +SL+ GLC GR +A ++
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 417 MIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGL 476
M ++ + F L+D + G + A+ + E+ RR + PD V +S I GL
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 477 VDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNI 536
+DEA +F M G P+ Y+ LI G+C K+ +KL EM Q+G++ + T+ I
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 537 IINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGG 596
+I G+C+ G++ A + F M G+ P+I+TYN L+ G C I +A ++ M G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 597 LDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGV 646
+D DI TYNI + G C ++ A + L G++P+ TY T+M G+
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 222/465 (47%), Gaps = 10/465 (2%)
Query: 101 GSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWK 160
GSD+R +L +R + +++ + M + +PS + + L ++ ++ Y V
Sbjct: 46 GSDYR---EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY 102
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
L+ M LG + T N L+ FCR + + S L M K + L+N +C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
RG Y +FD + G PNVV+YN +++G K++ +D A L M
Sbjct: 163 -RGDRVY------DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
I PD VT+N ++SG C G D R++ ++ + P+ ++ + GR+ EA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVG 400
EF+E+M + + P I ++ +I + A E + M G P T S L+ G
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 401 LCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPD 460
CK ++ L C+M ++G N V +T+L+ GY R G L A+ ++ + + P+
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 461 AVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLER 520
+ ++ ++GL G +++A + +M + G + YN +I G C G++ +A +
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 521 EMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPD 565
+ +GL+PD +T+ ++ G K+G + A F M G++P+
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 153/321 (47%), Gaps = 7/321 (2%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+ + ++ G + + +++L RM + GI P L L G + ++ M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
P +TFNALI + G + E M + D Y++LI C+ +
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
A +F + +G P+VV Y+ L+NGY K++ ++ L+ EM R + +
Sbjct: 308 DEA-------EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
VT+ I++ G+C+ G + + + R + G+ PN Y++ + GLC G++++A+
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
DM + G+ I +N II +AG +A++ Y ++ GL P T +++++GL KKG
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 406 RLPEAWDLLCKMIEKGFPINK 426
EA L KM E G N+
Sbjct: 481 LRREADALFRKMKEDGILPNE 501
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 101 GSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWK 160
G D ++L+ G ++ ++ M + I P L + ++ G +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 161 LFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYC 220
+ +MI P T++ LI G C + E + M C D Y+ILIN YC
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 221 IRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSR 280
+ + G +F + + G+ N V Y L+ GY +A ++ A ++ M
Sbjct: 338 KSKKVEH-------GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 281 DIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEA 340
+ P+ +T+N+++ G C G +E +L D+ +G+ + Y+I + G+C AG + +A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 341 MEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSC 392
+ + + +G+ P I+ + +++ + GL A ++ M + G+ P+ C
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Query: 511 KLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYN 570
KL+++L L M Q LP F+ +++ K + I + M G+ ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 571 TLIGGYCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSA 630
L+ +C+ + A + KM G +P I T+ ++G+C ++ A M D++V
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 631 GIVPNTVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKT 689
G PN V YNT+++G+C +D A+ + ++ K P+VVT N L+S C G
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 690 LLWGQKLSEISFDFDETSYKIMDRA---YHNIQENAEFFQETSEKSLFLDFL 738
+++ D ++ + A + E EF++E +SL D +
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 219/431 (50%), Gaps = 2/431 (0%)
Query: 240 DMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKY 299
+M+Q + P++V + +L K D LY +M + I+ D +F I++ C+
Sbjct: 69 EMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 127
Query: 300 GGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAF 359
+ LL + G P+ + G C R EA+ + M G P++ +
Sbjct: 128 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 360 NSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIE 419
N++I + NA E + M + G+ + T ++L+ GL GR +A LL M++
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 420 KGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDE 479
+ N + FT L+D + + G+L+ A++L+ E+ RR + P+ +++ ING G + +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 480 AYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIIN 539
A +F M G P+ YN+LI GFC ++ + +KL EM +GL+ D FT+N +I+
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 540 GFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGGYCKALDIVRADELVNKMYAGGLDP 599
G+C+ G++ A F M G+ PDIVTYN L+ C I +A +V + +D
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 600 DITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPNTVTYNTLMNGVCCDILDR-AIIIA 658
DI TYNI + G C K+ +A + L G+ P+ + Y T+++G+C L R A +
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 659 AKLLKMAFVPN 669
++ + F+P+
Sbjct: 488 RRMKEDGFMPS 498
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 207/445 (46%), Gaps = 7/445 (1%)
Query: 136 MPSESAITILFKSLLRVGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGES 195
+PS T + + ++ + V L+ M +LG Y+F LI FCR + + +
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 196 LLHVMHKYMCVADFFAYNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYN 255
LL M K L+N +C + A+ + D + G PNVV+YN
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS-------LVDSMDGFGFVPNVVIYN 188
Query: 256 ALLNGYVKARDIDQANMLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVS 315
++NG K RD++ A ++ M + I DAVT+N ++SG G D RLLRD+
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248
Query: 316 GLLPNCTLYDITVAGLCWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENA 375
+ PN + + G L EA +++M + + P++F +NS+I + G +A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 376 FEAYKIMHQFGLTPSSCTCSSLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDG 435
+ +M G P T ++L+ G CK R+ + L C+M +G + + L+ G
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 436 YFRIGDLIGAQSLWNELNRRKIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPN 495
Y + G L AQ ++N + + PD V ++ ++ L G +++A + ++ + +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 496 NFAYNSLIAGFCNRGKLNEALKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFM 555
YN +I G C KL EA L R + +KG+ PD + +I+G C++G + A
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Query: 556 DMYRTGLVPDIVTYNTLIGGYCKAL 580
M G +P Y+ + + +L
Sbjct: 489 RMKEDGFMPSERIYDETLRDHYTSL 513
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 214/442 (48%), Gaps = 7/442 (1%)
Query: 336 RLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCS 395
+ D+A F +M + PSI F ++ ++ + Y M G++ + +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 396 SLLVGLCKKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRR 455
L+ C+ RL A LL KM++ GF + V LL+G+ + A SL + ++
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 456 KIFPDAVAFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLIAGFCNRGKLNEA 515
P+ V ++ INGL K ++ A VF M + G + YN+LI+G N G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 516 LKLEREMRQKGLLPDNFTFNIIINGFCKQGRMKPAIDAFMDMYRTGLVPDIVTYNTLIGG 575
+L R+M ++ + P+ F +I+ F K+G + A + + +M R +VP++ TYN+LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 576 YCKALDIVRADELVNKMYAGGLDPDITTYNIRMHGYCNIRKMNQAAMMLDELVSAGIVPN 635
+C + A + + M + G PD+ TYN + G+C +++ + E+ G+V +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 636 TVTYNTLMNGVC-CDILDRAIIIAAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKTLLWGQ 694
TYNTL++G C L+ A + +++ P++VT N+LL C G EK L+ +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 695 KLSEISFDFDETSYKIMDRAY---HNIQENAEFFQETSEKSLFLDFLMGCMTLNVTGDFC 751
L + D D +Y I+ + ++E F+ + K + D + + + C
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI---AYITMISGLC 475
Query: 752 VQSMKLQTAAIGRRGRKAAVWP 773
+ ++ + + RR ++ P
Sbjct: 476 RKGLQREADKLCRRMKEDGFMP 497
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 194/401 (48%), Gaps = 7/401 (1%)
Query: 103 DFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLF 162
D L+H + R + + +L +M ++G PS + L + + L
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 163 RDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIR 222
M G P+ +N +I G C+N + + + M K AD YN LI+
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 223 GQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDI 282
G+ + A R++ DM++ + + PNV+ + AL++ +VK ++ +A LY+EM R +
Sbjct: 233 GRWT------DAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 283 APDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAME 342
P+ T+N +++G C +G + D + + G P+ Y+ + G C + R+++ M+
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 343 FFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLC 402
F +M +G+ F +N++I Y +AG A + + M G++P T + LL LC
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 403 KKGRLPEAWDLLCKMIEKGFPINKVAFTVLLDGYFRIGDLIGAQSLWNELNRRKIFPDAV 462
G++ +A ++ + + ++ + + +++ G R L A L+ L R+ + PDA+
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Query: 463 AFSAYINGLSKAGLVDEAYGVFLEMSRIGFVPNNFAYNSLI 503
A+ I+GL + GL EA + M GF+P+ Y+ +
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 159/332 (47%), Gaps = 8/332 (2%)
Query: 106 VLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLRVGDYGSVWKLFRDM 165
+ + +++G + +E+ Y M + GI L L G + +L RDM
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 166 IHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFAYNILINAYCIRGQT 225
+ P+ F ALI F + G + +L M + V + F YN LIN +CI G
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 226 SYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQANMLYEEMRSRDIAPD 285
G + +FD++ +G P+VV YN L+ G+ K++ ++ L+ EM + + D
Sbjct: 306 -------GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 286 AVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGLCWAGRLDEAMEFFE 345
A T+N ++ G+C+ G + ++ + G+ P+ Y+I + LC G++++A+ E
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 346 DMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPSSCTCSSLLVGLCKKG 405
D+ + + I +N II R + A+ ++ + + G+ P + +++ GLC+KG
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 406 RLPEAWDLLCKMIEKGF-PINKVAFTVLLDGY 436
EA L +M E GF P ++ L D Y
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 7/299 (2%)
Query: 92 FMCDDFHLFGSDFRVLDALLHGYLRVEMSAEVMEILYRMREVGIMPSESAITILFKSLLR 151
F C + +D + L+ G + +L M + I P+ T L + ++
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 152 VGDYGSVWKLFRDMIHLGPRPSNYTFNALILGFCRNGCIRIGESLLHVMHKYMCVADFFA 211
G+ L+++MI P+ +T+N+LI GFC +GC+ + + +M C D
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 212 YNILINAYCIRGQTSYALGKCGAGRMIFDMIQEEGLSPNVVVYNALLNGYVKARDIDQAN 271
YN LI +C + G +F + +GL + YN L++GY +A ++ A
Sbjct: 327 YNTLITGFCKSKRVE-------DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 272 MLYEEMRSRDIAPDAVTFNIIVSGHCKYGGMEDGDRLLRDLSVSGLLPNCTLYDITVAGL 331
++ M ++PD VT+NI++ C G +E ++ DL S + + Y+I + GL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 332 CWAGRLDEAMEFFEDMFEKGISPSIFAFNSIIAAYSRAGLEENAFEAYKIMHQFGLTPS 390
C +L EA F + KG+ P A+ ++I+ R GL+ A + + M + G PS
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 284,019,305
Number of Sequences: 539616
Number of extensions: 12034095
Number of successful extensions: 47331
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 32183
Number of HSP's gapped (non-prelim): 3509
length of query: 783
length of database: 191,569,459
effective HSP length: 126
effective length of query: 657
effective length of database: 123,577,843
effective search space: 81190642851
effective search space used: 81190642851
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)