BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039934
(329 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 329
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/329 (90%), Positives = 316/329 (96%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MP+IPEEPLL PNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQD+R WESLT DE
Sbjct: 1 MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
KHFI+HVLAFFAASDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S+EK+RLF A ETVPC+AKKA+WAL WIDGSE+FAER+IAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSNEKNRLFHAIETVPCIAKKAEWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLL+ KLSEERVKGIV++AV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLKKKLSEERVKGIVRDAVNIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG LMSQYIEFVADRLLGALGCGK Y V+NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVSNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKA+VMSS+NGNGG HVFKMDEDF
Sbjct: 301 RVGEYQKAAVMSSINGNGGTHVFKMDEDF 329
>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/329 (91%), Positives = 313/329 (95%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MP+IPEEPLL NPDRFCMFPIQYP IWEMYKKAEASFWTAEEVDLS DIR WE+LT DE
Sbjct: 1 MPAIPEEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDIRHWENLTPDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
KHFI+HVLAFFAASDGIVLENLA RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFISHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S+EK+RLF A ETVPCVAKKA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSEEKNRLFHAIETVPCVAKKARWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEE+VKGIVK+AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALPCALVGMNG LMSQYIEFVADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEK
Sbjct: 241 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMSS+NGNGGNHVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSINGNGGNHVFKMDEDF 329
>gi|225451453|ref|XP_002269951.1| PREDICTED: ribonucleoside-diphosphate reductase small chain [Vitis
vinifera]
gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
Length = 329
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/329 (89%), Positives = 313/329 (95%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIPEEPLL PNPDRFCMFPIQYPE+WEMYKKAEASFWTAEEVDLSQD RQWE+LT+DE
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWENLTSDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
KHFI+H+LAFFAASDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61 KHFISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+ EK+RLF A +T+PCVAKKA WAL WIDGSETFAERL+AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDPKEKNRLFHAIDTIPCVAKKAQWALRWIDGSETFAERLLAFACVEGIFFSGSFCSIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVK IV ++V+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKAIVADSVDIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMN ALMSQYIEFVADRLLGALG GK+Y V+NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNSALMSQYIEFVADRLLGALGYGKMYNVSNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMSSLNG+G HVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGDGDTHVFKMDEDF 329
>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/329 (90%), Positives = 310/329 (94%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MP+IPEEPLL NPDRFCMFPIQYP IWEMYKKAEASFWTAEEVDLS D+ WE+LT DE
Sbjct: 1 MPAIPEEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDVGHWENLTPDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
KHFI+HVLAFFAASDGIVLEN+A RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S EK+RLF A ETVPCVAKKA+WAL WIDG E+FAERLIAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVKGIVKEAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGIVKEAVDIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D+LPCALVGMNG LMSQYIEFVADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEK
Sbjct: 241 VDSLPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMSS+NGNG NHVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSINGNGDNHVFKMDEDF 329
>gi|356571527|ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 329
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/329 (88%), Positives = 311/329 (94%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIPEEPLL PNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD+R W+SLT E
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+THVLAFFAASDGIVLENLA RF KE+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFVTHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+SD+K+ LFRA +T+PCVAKKA WAL WID S++FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDQKNHLFRAIDTIPCVAKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERV+ IV++AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVRDAVDIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG LMSQYIEFVADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVM+SLNGNGG HVFKMDEDF
Sbjct: 301 RVGEYQKASVMNSLNGNGGTHVFKMDEDF 329
>gi|356558708|ref|XP_003547645.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 330
Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/330 (87%), Positives = 310/330 (93%), Gaps = 1/330 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIPEEPLL PNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD+R W+SLT E
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIVLENLA RF KE+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFVSHVLAFFAASDGIVLENLAGRFTKEIQIPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S +KS LFRA +T+PCV KKA WAL WID S++FAERL+AFACVEGIFFSGSFCA+F
Sbjct: 121 IKDSSQKSHLFRAIDTIPCVTKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAVF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERV+ IVK+AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVKDAVDIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG LMSQYIEFVADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGN-GGNHVFKMDEDF 329
RVGEYQKASVMSSLNGN GGNHVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGGNHVFKMDEDF 330
>gi|356505372|ref|XP_003521465.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 329
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/329 (88%), Positives = 307/329 (93%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIPEE LLTPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD+R W +L+ E
Sbjct: 1 MPSIPEERLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFITHVLAFFAASDGIVLENLA RF KE+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S EK+RLFRA T+PC+ KKA WAL WID SE+FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSTEKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERV+ IV++AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG LMS+YIEFVADRLL ALGCGKVYG NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSRYIEFVADRLLDALGCGKVYGAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMSSLNGNGG HVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGAHVFKMDEDF 329
>gi|449455910|ref|XP_004145693.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Cucumis sativus]
Length = 329
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 287/329 (87%), Positives = 306/329 (93%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIP+EPLL PNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD R W+SLT+DE
Sbjct: 1 MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
KHFITHVLAFFAASDGIVLENLA RFMKEVQV+E RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S+EK+RLF A +TVPCV KKADWAL WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+ +RVK IV EAV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG LMSQYIEFVADRL+GALG K+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMS+LNGNGG H FKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329
>gi|449492913|ref|XP_004159139.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Cucumis sativus]
Length = 329
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 286/329 (86%), Positives = 305/329 (92%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIP+EPLL PNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD R W+SLT+DE
Sbjct: 1 MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
KHFITHVLAFFAASDGIVLENLA RFMKE QV+E RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFITHVLAFFAASDGIVLENLAGRFMKEXQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+S+EK+RLF A +TVPCV KKADWAL WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+ +RVK IV EAV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG LMSQYIEFVADRL+GALG K+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMS+LNGNGG H FKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329
>gi|1710401|sp|P49730.1|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleoside-diphosphate reductase R2
subunit; AltName: Full=Ribonucleotide reductase small
subunit
gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
Length = 329
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/329 (87%), Positives = 302/329 (91%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MP IPEEPLL +PDRFCMFPIQYP+IWEMYKKA ASFWTAEEVDLS D R WE+LT E
Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFITHVLAFFAASDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+SDEKSRLFRA ET PCV KKA WAL WIDGSETFAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERVKGIV +AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG LMS+YIEFVADRLL ALG K+Y NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMSSLNGNG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329
>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 278/333 (83%), Positives = 307/333 (92%), Gaps = 4/333 (1%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
MPS+PEEP+LTP PDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD R WE SL+ D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLSND 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI HVLAFFAASDGIVLENL+ RFM +VQ+SEARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++ E+ LFRA ET+PCV KKA+WA+ WI+GS++FAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL EER+K IV +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEERLKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN LMSQYIEFVADRLL ALGCGKVYGV+NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLTALGCGKVYGVSNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG---NHVFKMDEDF 329
KRVGEYQKASVMSS++GN +HVFK+DEDF
Sbjct: 301 KRVGEYQKASVMSSVHGNAAFNDDHVFKLDEDF 333
>gi|75224904|sp|Q6Y657.1|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
chain B; AltName: Full=Ribonucleoside-diphosphate
reductase R2B subunit; AltName: Full=Ribonucleotide
reductase small subunit B
gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
Length = 333
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/333 (82%), Positives = 306/333 (91%), Gaps = 4/333 (1%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
MPS+PEEP+LTP PDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD R WE SLT D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI HVLAFFAASDGIVLENL+ RFM +VQ+SEARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++ E+ LFRA ET+PCV KKA+WA+ WI+GS++FAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL E+R+K IV +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN LMSQYIEFVADRLL ALGC KVYGV+NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG---NHVFKMDEDF 329
KRVGEYQKAS+MSS++GN +HVFK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333
>gi|388503744|gb|AFK39938.1| unknown [Medicago truncatula]
Length = 330
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/330 (84%), Positives = 301/330 (91%), Gaps = 1/330 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MP+ PEEPLL PNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLS D++ W++LT E
Sbjct: 1 MPAFPEEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWQNLTDGE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIVLENLA RFMKE+QVSEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFISHVLAFFAASDGIVLENLAGRFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I +S EK+RLF A ET+PC+AKKADWA+ WID S++FAER++AFACVEGIFFSGSFCAIF
Sbjct: 121 ISDSAEKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLS ERVK IV +AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSSERVKEIVCDAVEIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
C LPCALVGMNG LMS YIEFVADRLLG LGC KVY V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CHTLPCALVGMNGGLMSTYIEFVADRLLGELGCEKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNG-GNHVFKMDEDF 329
RVGEYQKASVM+SLNGNG + FK+DEDF
Sbjct: 301 RVGEYQKASVMNSLNGNGAADFCFKLDEDF 330
>gi|15232077|ref|NP_189342.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
thaliana]
gi|75273949|sp|Q9LSD0.1|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
AltName: Full=Ribonucleoside-diphosphate reductase TSO2
subunit; AltName: Full=Ribonucleotide reductase small
subunit C
gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
thaliana]
Length = 332
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/332 (86%), Positives = 306/332 (92%), Gaps = 3/332 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
MPS+PEEPLLTP PDRFCMFPI YP+IWEMYKKAEASFWTAEEVDLSQD R WE SL
Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI HVLAFFAASDGIVLENLA+RFM +VQVSEARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++ E+ LFRA ET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSEERVK IV +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN LMSQYIEFVADRLLGALG GKVYGVTNPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG--NHVFKMDEDF 329
KRVG+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 282/329 (85%), Positives = 303/329 (92%), Gaps = 3/329 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
+PEEPLLTP PDRFCMFPI YP+IWEMYKKAEASFWTAEEVDLSQD R WE+ L E+H
Sbjct: 1 MPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENNLNDGERH 60
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFAASDGIVLENLA+RFM +VQVSEARAFYGFQIAIENIHSEMYSLLL+TYIK
Sbjct: 61 FIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIK 120
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
++ E+ LFRA ET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+IFWL
Sbjct: 121 DNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSEERVK IV +AVEIEREFVCD
Sbjct: 181 KKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCD 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALPCALVGMN LMSQYIEFVADRLLGALG GKVYGVTNPFDWMELISLQGKTNFFEKRV
Sbjct: 241 ALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGG--NHVFKMDEDF 329
G+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 GDYQKASVMSSVNGNGAFDNHVFSLDEDF 329
>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
Length = 339
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/330 (80%), Positives = 291/330 (88%), Gaps = 2/330 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EEPLL + DRF MFPI++P+IWE YKKA ASFWTAEEVDLS D R W E+L+ DE
Sbjct: 10 PCDAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDEALSPDE 69
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 70 RHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 129
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I++ EK RLFRA +TVP V +KADWA+ WIDG E FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 130 IRDDAEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIF 189
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR+KL E RV+ IV +AV+IEREFV
Sbjct: 190 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLRSKLDEARVREIVADAVDIEREFV 249
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG LMSQYIEFVADRLL ALGC K+Y TNPFDWMELISLQGKTNFFEK
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGCKKMYNATNPFDWMELISLQGKTNFFEK 309
Query: 301 RVGEYQKASVMSSLNGN-GGNHVFKMDEDF 329
RVG+YQKASVM+SLNG+ NHVF +DEDF
Sbjct: 310 RVGDYQKASVMNSLNGSAAANHVFSIDEDF 339
>gi|212723480|ref|NP_001131892.1| uncharacterized protein LOC100193273 [Zea mays]
gi|194692834|gb|ACF80501.1| unknown [Zea mays]
gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|413944298|gb|AFW76947.1| Ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/339 (78%), Positives = 294/339 (86%), Gaps = 10/339 (2%)
Query: 1 MPSIPE--------EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQ 52
MPS P EPLL + DRF MFPI++P+IWE YKKA ASFWTAEEVDLS D R
Sbjct: 1 MPSTPTLVPPCDAVEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 W-ESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSE 111
W E+L+ DE+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSE
Sbjct: 61 WDEALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI++ EK RLFRA +TVP V +KADWA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDDVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY +LR+KL E RV+ IV +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDVLRSKLDEARVRTIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AV+IEREFVCDALP +LVGMNG LMSQYIEFVADRLL ALGC K+Y VTNPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVSLVGMNGDLMSQYIEFVADRLLMALGCKKMYNVTNPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGN-GGNHVFKMDEDF 329
QGKTNFFEKRVG+YQKASVM+SLNG+ NHVF +DEDF
Sbjct: 301 QGKTNFFEKRVGDYQKASVMNSLNGSAAANHVFSIDEDF 339
>gi|413953641|gb|AFW86290.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/330 (80%), Positives = 291/330 (88%), Gaps = 2/330 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EEPLL + DRF MFPI++P+IWE YKKA ASFWTAEEVDLS D R W E+L+ DE
Sbjct: 10 PCDAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDEALSPDE 69
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 70 RHFISHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 129
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I++ EK RLFRA +TVP V +KADWA+ WIDG E FAER++AFACVEGIFFSGSFCAIF
Sbjct: 130 IRDHVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERIVAFACVEGIFFSGSFCAIF 189
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLRNKL E RV+ IV +AV+IEREFV
Sbjct: 190 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLRNKLDEARVREIVADAVDIEREFV 249
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG LMSQYIEFVADRLL ALGC K+Y VTNPFDWMELISL GKTNFFEK
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVTNPFDWMELISLMGKTNFFEK 309
Query: 301 RVGEYQKASVMSSLNGNG-GNHVFKMDEDF 329
RVG+YQKASVM+SLNG G +HVF +DEDF
Sbjct: 310 RVGDYQKASVMNSLNGGGAADHVFSIDEDF 339
>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
gi|194704028|gb|ACF86098.1| unknown [Zea mays]
gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|223943167|gb|ACN25667.1| unknown [Zea mays]
gi|414586551|tpg|DAA37122.1| TPA: Ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/339 (79%), Positives = 290/339 (85%), Gaps = 10/339 (2%)
Query: 1 MPSIP--------EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQ 52
MPS P +EPLL + DRF MFPI+YP+IWE YKKA ASFWTAEEVDLS D R
Sbjct: 1 MPSAPALVPACDMQEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 WES-LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSE 111
W++ L+ DE+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSE
Sbjct: 61 WDAALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI++ EK RLFRA ETVP V +KADWA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDGTEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ IV +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AV+IEREFVCDALP ALVGMNG LMSQYIEFVADRLL ALG K+Y V NPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVANPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGN-GGNHVFKMDEDF 329
QGKTNFFEKRVGEYQKASVMSSLNG NH F +DEDF
Sbjct: 301 QGKTNFFEKRVGEYQKASVMSSLNGGAAANHTFSIDEDF 339
>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
Length = 345
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/326 (80%), Positives = 288/326 (88%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + DRF MFPI+YP+IWE YKKA ASFWTAEEVDLS D R W++ L+ DE+HF+
Sbjct: 20 EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFV 79
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETYI++
Sbjct: 80 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 139
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLFRA +TVP V +KADWA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 140 AEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 199
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ IV +AV+IEREFVCDAL
Sbjct: 200 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDAL 259
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P ALVGMNG LMSQYIEFVADRLL ALGC K+Y V NPFDWMELISLQGKTNFFEKRVG+
Sbjct: 260 PVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGD 319
Query: 305 YQKASVMSSLNGNGG-NHVFKMDEDF 329
YQKASVMSSLNG NHVF +DEDF
Sbjct: 320 YQKASVMSSLNGGASCNHVFSIDEDF 345
>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
Japonica Group]
gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
Length = 345
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/326 (80%), Positives = 288/326 (88%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + DRF MFPI+YP+IWE YKKA ASFWTAEEVDLS D R W++ L+ DE+HF+
Sbjct: 20 EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFV 79
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETYI++
Sbjct: 80 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDD 139
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLFRA +TVP V +KADWA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 140 VEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 199
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ IV +AV+IEREFVCDAL
Sbjct: 200 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDAL 259
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P ALVGMNG LMSQYIEFVADRLL ALGC K+Y V NPFDWMELISLQGKTNFFEKRVG+
Sbjct: 260 PVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGD 319
Query: 305 YQKASVMSSLNGNGG-NHVFKMDEDF 329
YQKASVMSSLNG NHVF +DEDF
Sbjct: 320 YQKASVMSSLNGGASCNHVFSIDEDF 345
>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
Japonica Group]
Length = 339
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/339 (78%), Positives = 292/339 (86%), Gaps = 10/339 (2%)
Query: 1 MPSIP--------EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQ 52
MP+ P EEPLL + +RF MFPI+YP+IWE YKKA ASFWTAEEVDLS D R
Sbjct: 1 MPAAPTLVPACDLEEPLLAESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 WES-LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSE 111
W++ L+ DE+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSE
Sbjct: 61 WDAALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI++ EK RLFRA +TVP V +KADWA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ IV +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDEARVREIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AV+IEREFVCDALP ALVGMNG LMSQYIEFVADRLL ALGC K+Y V NPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGNG-GNHVFKMDEDF 329
QGKTNFFEKRVG+YQKASVMSSLNG NHVF +DEDF
Sbjct: 301 QGKTNFFEKRVGDYQKASVMSSLNGGASANHVFSIDEDF 339
>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 331
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/325 (80%), Positives = 290/325 (89%), Gaps = 1/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L NP+RF MFPI+YP++WEMYKKAEASFWTAEEVDLS D + WE+LT DE+HFI+
Sbjct: 7 KEPILVENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWETLTDDERHFIS 66
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFMKE+Q+ EARAFYGFQIAIENIHSEMYSLLLE YIK+
Sbjct: 67 HVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDQA 126
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKSRLF A ET+PCVA+KADWAL WID + +FAER++AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 127 EKSRLFNAIETIPCVARKADWALKWIDSAGSFAERILAFACVEGIFFSGSFCAIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLY+LL NKLSEERV IV EAVEIEREFVC+AL
Sbjct: 187 GLMPGLTFSNELISRDEGLHCDFACLLYTLLINKLSEERVYEIVCEAVEIEREFVCEALS 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C LVGMN LMS+YI+FVADRLL +LG K Y NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 247 CDLVGMNKILMSEYIDFVADRLLVSLGYRKKYNALNPFDWMELISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLN-GNGGNHVFKMDEDF 329
QKASVMS+LN G+ NHVF++DEDF
Sbjct: 307 QKASVMSNLNGGDTNNHVFRLDEDF 331
>gi|212274629|ref|NP_001130908.1| uncharacterized protein LOC100192012 [Zea mays]
gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/339 (78%), Positives = 289/339 (85%), Gaps = 10/339 (2%)
Query: 1 MPSIP--------EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQ 52
MPS P +EPLL + DRF MFPI+YP+IWE YKKA ASFWTAEEVDLS D R
Sbjct: 1 MPSAPALVPACDMQEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 WES-LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSE 111
W++ L+ DE+HFI+HVLAFFAASDGIVLENLA+RFM +VQ +EARAFYGFQIAIENIHSE
Sbjct: 61 WDAALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQAAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI++ EK RLFRA ETVP V +KADWA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDGTEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ IV +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AV+IEREFVCDALP ALVGMNG LMSQYIEFVADRLL ALG K+Y V NPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVANPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGN-GGNHVFKMDEDF 329
QGKTNFFEKRVGEYQKASVMSSLNG NH F +DEDF
Sbjct: 301 QGKTNFFEKRVGEYQKASVMSSLNGGAAANHTFSIDEDF 339
>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
Length = 339
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/326 (80%), Positives = 288/326 (88%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + DRF MFPI++P+IWE YKKA ASFWTAEEVDLS D R W++ L+ DE+HFI
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETYI++
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLFRA ETVP V +KADWA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 134 AEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ IV +AV+IEREFVCDAL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVADAVDIEREFVCDAL 253
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P ALVGMNGALMSQYIEFVADRLL ALG K+Y V NPFDWMELISLQGKTNFFEKRVGE
Sbjct: 254 PVALVGMNGALMSQYIEFVADRLLMALGHKKMYNVANPFDWMELISLQGKTNFFEKRVGE 313
Query: 305 YQKASVMSSLNGN-GGNHVFKMDEDF 329
YQKASVMSSL+G NH+F +DEDF
Sbjct: 314 YQKASVMSSLSGGAAANHIFSIDEDF 339
>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
Length = 347
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/325 (78%), Positives = 289/325 (88%), Gaps = 1/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEP+L NP RFCMFPI+YP +WEMYKKAEASFWTAEEVDLSQD + WESLT +EKHF++
Sbjct: 23 EEPILADNPQRFCMFPIRYPRVWEMYKKAEASFWTAEEVDLSQDAKHWESLTDNEKHFVS 82
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFMKE+Q+ EARAFYGFQIAIENIHSEMYSLLLETYIK+++
Sbjct: 83 HVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDNE 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF A ET+PCVAKKADWAL WID S++FAER++AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 143 VKAKLFNAIETIPCVAKKADWALRWIDSSQSFAERIVAFACVEGIFFSGSFCAIFWLKKR 202
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL KL E+RVK IV +AVEIER+FVC+AL
Sbjct: 203 GLMPGLTFSNELISRDEGLHCDFACLLYSLLNVKLDEKRVKEIVSDAVEIERQFVCEALS 262
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C LVGMN LMSQYI+FVADRL+ LG K++ NPFDWM+LISLQGKTNFFEKRVGEY
Sbjct: 263 CDLVGMNARLMSQYIDFVADRLMVVLGYNKLFNAINPFDWMDLISLQGKTNFFEKRVGEY 322
Query: 306 QKASVMSSL-NGNGGNHVFKMDEDF 329
QKASVM+ + N +HVFK+D+DF
Sbjct: 323 QKASVMAKVSNPEADHHVFKLDDDF 347
>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 325
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/326 (78%), Positives = 289/326 (88%), Gaps = 1/326 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EP+L NP RFCMFPI+YP++WEMYKKAEASFWTAEEVDLS D++ WE+LT +E+HF
Sbjct: 1 MEQEPILAENPGRFCMFPIKYPQVWEMYKKAEASFWTAEEVDLSADLKHWEALTDNERHF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIVLENLA RFMKE+Q+ EARAFYGFQIAIENIHSEMYSLLLE YIK+
Sbjct: 61 ISHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKD 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK RLF A ET+PCV +KA+WAL WID S +FAER++AFACVEGIFFSGSFC+IFWLK
Sbjct: 121 QSEKHRLFNAIETIPCVTRKAEWALKWIDSSGSFAERILAFACVEGIFFSGSFCSIFWLK 180
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLHCDFACLLY+LL NKLSE+RV IV EAV+IEREFVC+A
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLSEDRVHEIVCEAVDIEREFVCEA 240
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
L C LVGMN +MS+YI+FVADRLL +LG K Y NPFDWMELISLQGKTNFFEKRVG
Sbjct: 241 LSCDLVGMNKIMMSEYIDFVADRLLVSLGYNKRYNARNPFDWMELISLQGKTNFFEKRVG 300
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQKASVMS LNG G NHVF++DEDF
Sbjct: 301 EYQKASVMSHLNG-GDNHVFRLDEDF 325
>gi|357124601|ref|XP_003563986.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Brachypodium distachyon]
Length = 339
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/326 (79%), Positives = 289/326 (88%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + DRF MFPI++P+IWE YKKA ASFWTAEEVDLS D R W++ L+ DE+HF+
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFV 73
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLL+ETYI+
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRED 133
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLFRA +T+P V +KA+WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 134 VEKDRLFRAVDTIPAVRRKAEWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY +LR+KL E RV+ IV +AV+IEREFVCDAL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRSKLDESRVREIVGDAVDIEREFVCDAL 253
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCALVGMNG LMSQYIEFVADRLL ALGC K+Y TNPFDWMELISLQGKTNFFEKRVG+
Sbjct: 254 PCALVGMNGDLMSQYIEFVADRLLMALGCKKMYNATNPFDWMELISLQGKTNFFEKRVGD 313
Query: 305 YQKASVMSSLNGNGG-NHVFKMDEDF 329
YQKASVMS+LNG NHVF +DEDF
Sbjct: 314 YQKASVMSNLNGGAATNHVFSIDEDF 339
>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/330 (79%), Positives = 289/330 (87%), Gaps = 2/330 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EEPLL + DRF MFPI++P+IWE YKKA ASFWTAEEV LS D R W E+L+ DE
Sbjct: 10 PCDAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVGLSADARHWDEALSPDE 69
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 70 RHFISHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 129
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I++ EK RLFRA +TVP V +KADWA+ WIDG E FAER++AFACVEGIFFSGSFCAIF
Sbjct: 130 IRDHVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERIVAFACVEGIFFSGSFCAIF 189
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLRNKL E RV+ IV +AV+IEREFV
Sbjct: 190 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLRNKLDEARVREIVADAVDIEREFV 249
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG LMSQYIEFVADRLL ALGC K+Y VTNPFDWMELISL GKTNFFEK
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVTNPFDWMELISLMGKTNFFEK 309
Query: 301 RVGEYQKASVMSSLNGN-GGNHVFKMDEDF 329
RVG+YQKASVM+SLNG +HVF +DEDF
Sbjct: 310 RVGDYQKASVMNSLNGGAAADHVFSIDEDF 339
>gi|357111351|ref|XP_003557477.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
isoform 1 [Brachypodium distachyon]
gi|357111353|ref|XP_003557478.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
isoform 2 [Brachypodium distachyon]
Length = 336
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/336 (77%), Positives = 289/336 (86%), Gaps = 7/336 (2%)
Query: 1 MPSIP-----EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-E 54
MP+ P EEPLL + DRF MFPI+YP+IWE YKKA ASFWTAEEVDLS D R W E
Sbjct: 1 MPAAPNLVDAEEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSSDARHWDE 60
Query: 55 SLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYS 114
+L+ DE+HFI+HVLAFFAASDGIVLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYS
Sbjct: 61 TLSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYS 120
Query: 115 LLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSG 174
LLLETYI+++ EK RLFRA +TVP V +KA W++ WI+G E FAERL+AFACVEGIFFSG
Sbjct: 121 LLLETYIRDAAEKDRLFRAVDTVPAVRRKAVWSMRWIEGGERFAERLVAFACVEGIFFSG 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVE 234
SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LL KL E RV+ IV +AV+
Sbjct: 181 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLNGKLEESRVREIVADAVD 240
Query: 235 IEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGK 294
IEREF+CDALPCALVGMN LM QYIEFVADRLL ALGC K+Y NPFDWMELISLQGK
Sbjct: 241 IEREFICDALPCALVGMNAGLMGQYIEFVADRLLTALGCSKMYNAVNPFDWMELISLQGK 300
Query: 295 TNFFEKRVGEYQKASVMSSLNGNGG-NHVFKMDEDF 329
TNFFEKRVG+YQKASVMS+LNG NHVF +DEDF
Sbjct: 301 TNFFEKRVGDYQKASVMSNLNGGAATNHVFSIDEDF 336
>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/325 (79%), Positives = 287/325 (88%), Gaps = 1/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEP+L NP+RF MFPI+YP++WEMYKKAEASFWTAEEVDLS D + WE+LT +E+HFI+
Sbjct: 6 EEPILMENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWEALTDNERHFIS 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFMKE+Q+ EARAFYGFQIAIENIHSEMYSLLLE YIK+
Sbjct: 66 HVLAFFAASDGIVLENLAIRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDHA 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF A ET+PCV KKA+WAL WI + +FAER++AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFNAIETIPCVTKKAEWALKWIHSAGSFAERILAFACVEGIFFSGSFCAIFWLKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLY+LL NKLSE+RV IV EAV IE+EFVC+AL
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLSEDRVYEIVCEAVVIEQEFVCEALS 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C LVGMN LMS+YI+FVADRLL +LG K Y NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 246 CDLVGMNKTLMSEYIDFVADRLLVSLGYPKKYNSHNPFDWMELISLQGKTNFFEKRVGEY 305
Query: 306 QKASVMSSLNGN-GGNHVFKMDEDF 329
QKASVMS+LNGN NHVF++DEDF
Sbjct: 306 QKASVMSNLNGNDANNHVFRLDEDF 330
>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 342
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/322 (78%), Positives = 282/322 (87%)
Query: 8 PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHV 67
P+L RFCMFPI+Y +WEMYKKAEASFWTAEEVDLSQD++QWE+L+ EKHFI+HV
Sbjct: 21 PILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLSQDVQQWETLSVSEKHFISHV 80
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIVLENLAARF+ ++QV EARAFYGFQIA+ENIHSEMYSLLLETYIK+S EK
Sbjct: 81 LAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREK 140
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
+RLF A ET+PCVA+KA WAL+WI S +AERL+AFACVEGIFFSGSFCAIFWLKKRGL
Sbjct: 141 NRLFNAIETIPCVARKAKWALDWIHSSSLYAERLVAFACVEGIFFSGSFCAIFWLKKRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V+ IV EAVEIE EFVCDALPCA
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQWQKVQQIVHEAVEIETEFVCDALPCA 260
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN LMSQYI+FVADRLL ALG + Y V NPFDWME ISLQGK NFFE+RVG+YQK
Sbjct: 261 LIGMNSTLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDYQK 320
Query: 308 ASVMSSLNGNGGNHVFKMDEDF 329
ASVMSSL G N VFKMDEDF
Sbjct: 321 ASVMSSLQDGGKNFVFKMDEDF 342
>gi|351721787|ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
Length = 339
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/324 (77%), Positives = 281/324 (86%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L RFCMFPI+Y +IWEMYKKAEASFWTAEEVDLS D++ WE+L+ EKHFIT
Sbjct: 16 QEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWETLSVSEKHFIT 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAARF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLETYIK+S
Sbjct: 76 HVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSR 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A E +PCVA+KA+WAL+WI S +FAERL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERLVAFACVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR L ++V +V EAVEIE EFVCDALP
Sbjct: 196 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLISDQVHKLVHEAVEIETEFVCDALP 255
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LMSQYI+FVADRLL ALG + Y V NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 256 CALIGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDY 315
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMSSL G N VFK+DEDF
Sbjct: 316 QKASVMSSLQDAGKNFVFKLDEDF 339
>gi|388508294|gb|AFK42213.1| unknown [Lotus japonicus]
Length = 351
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/324 (76%), Positives = 280/324 (86%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDL+ D++ W +L+ EKHFIT
Sbjct: 28 QEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAARF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLET IK+S
Sbjct: 88 HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A E +PCVA+KA+WALNWI+ S +FAERL+AFAC+EGIFFSGSFC+IFWLKKR
Sbjct: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEGIFFSGSFCSIFWLKKR 207
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ L ERV IV EAVEIE EFVC+ALP
Sbjct: 208 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALP 267
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LMSQYI+FVADRLL +LG K Y V NPFDWME ISLQGK NFFE+RVGEY
Sbjct: 268 CALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVENPFDWMEFISLQGKANFFERRVGEY 327
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMSSL G N VFK+DEDF
Sbjct: 328 QKASVMSSLQDAGKNFVFKLDEDF 351
>gi|225432510|ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
[Vitis vinifera]
Length = 340
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/324 (77%), Positives = 284/324 (87%), Gaps = 1/324 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEP+L N RFCMFPI+Y ++WEMYKKAEASFWTAEEVDLS D++QWESL+ EKHFI+
Sbjct: 18 EEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAARF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIK+S
Sbjct: 78 HVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A E++ CVA KA WAL+WI S FAERLIAFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKHRLFNAIESISCVAGKAKWALDWIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V IV EAVEIE +FVC+ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHIVHEAVEIETQFVCEALP 257
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LMSQYI+FVADRLL ALG + Y V NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 258 CALIGMNATLMSQYIKFVADRLLVALGYERKYNVENPFDWMEFISLQGKANFFERRVGDY 317
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKAS+MSSL+G G N+VFK+DEDF
Sbjct: 318 QKASIMSSLDG-GKNYVFKIDEDF 340
>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/324 (77%), Positives = 281/324 (86%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L RFCMFPI+Y E+WEMYKKAEASFWTAEEVDLS+D++QWE+L+ EKHFI+
Sbjct: 19 QEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLSRDMQQWEALSDSEKHFIS 78
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAARF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLETYIK+S
Sbjct: 79 HVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSR 138
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A E +PCVA+KA WAL+WI S FAERL+AFAC+EGIFFSGSFCAIFWLKKR
Sbjct: 139 EKHRLFNAIENIPCVAEKAKWALDWIQSSMVFAERLVAFACIEGIFFSGSFCAIFWLKKR 198
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V IV EAVEIE +FVC+ALP
Sbjct: 199 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRQLHWQKVYHIVGEAVEIETKFVCEALP 258
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LM YI+FVADRLL ALG K Y V NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 259 CALIGMNATLMGDYIKFVADRLLVALGYQKKYNVENPFDWMEFISLQGKANFFERRVGDY 318
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMSSL G N+VFKMDEDF
Sbjct: 319 QKASVMSSLQDGGKNYVFKMDEDF 342
>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 329
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/330 (75%), Positives = 280/330 (84%), Gaps = 2/330 (0%)
Query: 1 MPSIP-EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD 59
M +P EPLL N RF MFPIQYP++WEMYKKAEASFWTAEEVDLS D++ WE+LT D
Sbjct: 1 MSPLPLAEPLLDENDQRFTMFPIQYPQVWEMYKKAEASFWTAEEVDLSDDMKHWETLTKD 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
EKHF++HVLAFFAASDGIVLENL RFM EVQ+ EARAFYGFQIAIENIHSEMYSLL++
Sbjct: 61 EKHFVSHVLAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDQ 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK+ EK LFRA +T+PCV KKADWAL WID S++FAERL+AFAC+EGIFFSGSFC+I
Sbjct: 121 YIKDPVEKDHLFRAIDTIPCVKKKADWALKWIDSSDSFAERLLAFACIEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
+WLKKRGLMPGLTFSNELISRDEGLH DFACLL+S+L NK SEE ++ IV EAVEIE+EF
Sbjct: 181 YWLKKRGLMPGLTFSNELISRDEGLHRDFACLLFSMLNNKPSEETIRKIVTEAVEIEKEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
VCD+LPCALVGMN +MS YIE+VAD L +LG K Y TNPFDWMELISLQGKTNFFE
Sbjct: 241 VCDSLPCALVGMNAGMMSDYIEYVADHLFCSLGLAKEYNTTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
KRVGEYQKA VM+S+ G N F +DEDF
Sbjct: 301 KRVGEYQKAGVMNSIGGGNAN-AFSLDEDF 329
>gi|15229476|ref|NP_189000.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
thaliana]
gi|27735240|sp|P50651.2|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
AltName: Full=Ribonucleoside-diphosphate reductase R2A
subunit; Short=AtRNR2; Short=Protein R2at; AltName:
Full=Ribonucleotide reductase small subunit A
gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
thaliana]
Length = 341
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/324 (76%), Positives = 273/324 (84%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++QWE+LT EKHFI+
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIVLENLAARF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IK+S
Sbjct: 78 HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V IV EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LGC + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341
>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
Length = 335
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/324 (76%), Positives = 275/324 (84%), Gaps = 1/324 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL N DRF MFPI+Y +IWEMYKKAEASFWTAEEVDL D++ WE L+ DE+HF++
Sbjct: 13 QEPLLASNDDRFVMFPIKYRDIWEMYKKAEASFWTAEEVDLGSDVKDWERLSDDERHFVS 72
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL ARFM+EVQV EARAFYGFQIA+ENIHSEMYSLLLE YIK+
Sbjct: 73 HVLAFFAASDGIVNENLGARFMQEVQVPEARAFYGFQIAMENIHSEMYSLLLEAYIKDPK 132
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A +TVP V KKA WAL WI+GS+ F+ERLIAFACVEGIFFSGSFC+IFWLKKR
Sbjct: 133 EKDKLFHAIDTVPVVRKKAHWALKWINGSDLFSERLIAFACVEGIFFSGSFCSIFWLKKR 192
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACLLY + N+LSEERV IV +AVEIE+EF+CDALP
Sbjct: 193 GLMPGLTFSNELISRDEGLHTDFACLLYRHIHNRLSEERVAEIVTQAVEIEKEFICDALP 252
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL ALG KVY V+NPFDWMELISLQGKTNFFEKRVG+Y
Sbjct: 253 VDLIGMNSRLMGQYIEFVADRLLVALGNPKVYNVSNPFDWMELISLQGKTNFFEKRVGDY 312
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM+ L G+ NH DEDF
Sbjct: 313 QKAGVMNGL-GSNDNHAIAFDEDF 335
>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/324 (75%), Positives = 273/324 (84%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++QWE+LT EKHFI+
Sbjct: 18 KEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAARF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET++K+S
Sbjct: 78 HVLAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFLKDSK 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V IV EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LGC + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERRYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGSKNYEFTTEEDF 341
>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
Length = 400
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/323 (74%), Positives = 272/323 (84%), Gaps = 2/323 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NPDRFCMFPI+YP+IWEMYKKAEASFWTAEEVDL D++ WE L+ E+HFI+H
Sbjct: 80 EPLLDENPDRFCMFPIKYPKIWEMYKKAEASFWTAEEVDLGDDMKHWEKLSDGERHFISH 139
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA RFMKEVQ+ EARAFYGFQ+AIENIHSEMYSLLLETYIK+ E
Sbjct: 140 VLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLETYIKDPIE 199
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF + ETVPC+ KKA WA+ WI +F ERL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 200 KHKLFHSIETVPCIKKKAQWAIKWIGSESSFPERLVAFAAVEGIFFSGSFCSIFWLKKRG 259
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACLLY +L +L E R+K I+ EAV+IE EF DALP
Sbjct: 260 LMPGLTFSNELISRDEGLHCDFACLLYGMLSKQLEESRIKEIICEAVDIENEFCTDALPV 319
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM+QYIEFVADRLL ALGC K Y VTNPFD+M++ISLQGKTNFFEKRVG+YQ
Sbjct: 320 DLIGMNSRLMAQYIEFVADRLLVALGCSKAYNVTNPFDFMDMISLQGKTNFFEKRVGDYQ 379
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ L G N F MDEDF
Sbjct: 380 KSGVMAGLQGKVQN--FSMDEDF 400
>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
Length = 335
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/323 (75%), Positives = 269/323 (83%), Gaps = 2/323 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL PN DRF MFPI+Y +IWEMYKKAEASFWTAEEVDLS D+ W L DEKHFI H
Sbjct: 15 EPLLDPNDDRFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMVHWNKLNNDEKHFIKH 74
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIVLENL RFM EVQ EARAFYGFQIAIENIHSEMYSLL++ Y+K++ E
Sbjct: 75 ILAFFAASDGIVLENLGVRFMGEVQFPEARAFYGFQIAIENIHSEMYSLLIDAYVKDAQE 134
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF+A + +PC+AKKADWA WI+ S FAERLIAFAC+EGIFFSGSFC+I+WLKKRG
Sbjct: 135 KTYLFQAIQNIPCIAKKADWAFKWIESSADFAERLIAFACIEGIFFSGSFCSIYWLKKRG 194
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLLYS + K +E V+ IVKEAVEIE+EFVCDALPC
Sbjct: 195 LMPGLTFSNELISRDEGLHRDFACLLYSYINKKPNESVVRQIVKEAVEIEKEFVCDALPC 254
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
ALVGMN LMS+YIEFVAD LLG LG K Y NPFDWMELISLQGKTNFFEKRVGEYQ
Sbjct: 255 ALVGMNADLMSEYIEFVADHLLGQLGMSKEYNAANPFDWMELISLQGKTNFFEKRVGEYQ 314
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+SLN F +DEDF
Sbjct: 315 KSGVMNSLNAEAAK--FSLDEDF 335
>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
Length = 394
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/324 (73%), Positives = 273/324 (84%), Gaps = 2/324 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NPDRFCMFPI+YP+IWEMYKKAEASFWTAEEVDL D++ WE L+ E+HFI+
Sbjct: 73 EEPLLDENPDRFCMFPIKYPQIWEMYKKAEASFWTAEEVDLGDDMKHWEKLSDGERHFIS 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFMKEVQ+ EARAFYGFQ+AIENIHSEMYSLLLE+YIK+
Sbjct: 133 HVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLESYIKDPQ 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF + ETVPC+ KKA WA+ WI F+ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 193 EKHKLFHSIETVPCIKKKAQWAMKWIGSDSVFSERLVAFAAVEGIFFSGSFCSIFWLKKR 252
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC+L+S+L ++ E RVK I+ EAVEIE+EF +ALP
Sbjct: 253 GLMPGLTFSNELISRDEGLHCDFACMLFSMLNTRIDETRVKQIIVEAVEIEQEFCTEALP 312
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM+QYI+FVADRLL +LGC K Y V NPF++ME+ISLQGKTNFFEKRVG+Y
Sbjct: 313 VDLIGMNSRLMAQYIQFVADRLLVSLGCAKQYNVVNPFEFMEMISLQGKTNFFEKRVGDY 372
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM+ L G N F MDEDF
Sbjct: 373 QKNGVMAGLQGKVQN--FSMDEDF 394
>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
Length = 340
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/324 (75%), Positives = 269/324 (83%), Gaps = 1/324 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++QWE+LT EKHFI+
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IK+S
Sbjct: 78 HILAFFAASDGIVLENLA-RFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 136
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ET+PC++KKA W L+WI +FA RL+AFAC EGIFFSGSFCAIFWLKKR
Sbjct: 137 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACAEGIFFSGSFCAIFWLKKR 196
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL SLL+ + E+V IV EAVEIE EFVC ALP
Sbjct: 197 GLMPGLTFSNELISRDEGLHCDFACLLISLLQLHVPLEKVYQIVHEAVEIETEFVCKALP 256
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LGC + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 257 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 316
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 317 QKASVMSNLQNGNQNYEFTTEEDF 340
>gi|412991446|emb|CCO16291.1| Ribonucleoside-diphosphate reductase small chain, putative
[Bathycoccus prasinos]
Length = 330
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/333 (72%), Positives = 274/333 (82%), Gaps = 7/333 (2%)
Query: 1 MPSIPE---EPLLTPN-PDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL 56
MPS + EPLL DRF +FP++Y +WEMYKKA+ASFWTAEEVDL D++ WE L
Sbjct: 1 MPSDEQQLAEPLLDDGGNDRFVLFPLKYDAVWEMYKKAQASFWTAEEVDLQDDMKHWEKL 60
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
TADEKHFI+HVLAFFAASDGIVLENL RFMKE+Q+ EARAFYGFQIAIENIHSEMYSLL
Sbjct: 61 TADEKHFISHVLAFFAASDGIVLENLGVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLL 120
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSF 176
++ YIK+ EK+RLF A +T+PCV KKA WAL WIDGSE+FAERL+AFACVEGIFFSGSF
Sbjct: 121 IDQYIKDPVEKTRLFNAVDTIPCVQKKAQWALKWIDGSESFAERLVAFACVEGIFFSGSF 180
Query: 177 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIE 236
C+I+WLKKRG+MPGLTFSNELISRDEGLH DFACLLY++L N EE+++ IV EAVEIE
Sbjct: 181 CSIYWLKKRGMMPGLTFSNELISRDEGLHRDFACLLYTMLNNTPGEEKLRKIVTEAVEIE 240
Query: 237 REFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTN 296
+EFVCDALPCALVGMN +M YIE+VAD LL LG K Y NPFDWMELISLQGKTN
Sbjct: 241 KEFVCDALPCALVGMNADMMRDYIEYVADHLLSQLGFAKEYDTANPFDWMELISLQGKTN 300
Query: 297 FFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
FFEKRVGEYQK+ V G+G F +DEDF
Sbjct: 301 FFEKRVGEYQKSGVT---GGSGSMSTFALDEDF 330
>gi|384251981|gb|EIE25458.1| ribonucleotide reductase [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 232/328 (70%), Positives = 271/328 (82%), Gaps = 1/328 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P EPLL NPDRFCMFPI+Y +WEMYKKAEASFWTAEEVDLS D W L++DEK
Sbjct: 4 PVQHHEPLLAENPDRFCMFPIKYSAVWEMYKKAEASFWTAEEVDLSSDYTDWMKLSSDEK 63
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++H+LAFFA+SDGIVLENL+ RFM E+Q+ EARAFYGFQIAIENIHSEMYSLLLETYI
Sbjct: 64 HFVSHILAFFASSDGIVLENLSQRFMSEIQIPEARAFYGFQIAIENIHSEMYSLLLETYI 123
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
K+ EK RLF A ETVP V +KA+WAL W+ +FAERL+A+ CVEGIFFSGSFC+IFW
Sbjct: 124 KDPKEKHRLFHAMETVPAVKRKAEWALKWVGSQSSFAERLVAWGCVEGIFFSGSFCSIFW 183
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLM GLTFSNELISRDEGLHCDFACLLY+LL NKL ++++ I+ EAV+IE++FVC
Sbjct: 184 LKKRGLMHGLTFSNELISRDEGLHCDFACLLYTLLNNKLDDDKLLSIITEAVDIEKDFVC 243
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LMS+YI+FVADRLL ALG K Y NPFDWME++SLQGKTNFFEKR
Sbjct: 244 EALPVDLIGMNKKLMSEYIDFVADRLLVALGQEKHYNTKNPFDWMEMLSLQGKTNFFEKR 303
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQKA VM+ L+ + H ++DF
Sbjct: 304 VGEYQKAGVMNGLSADAL-HSLSFNDDF 330
>gi|384252466|gb|EIE25942.1| ribonucleoside-diphosphate reductase small chain C [Coccomyxa
subellipsoidea C-169]
Length = 340
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/326 (71%), Positives = 272/326 (83%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL+PN DRF M+P++Y ++EMYKKA ASFWT EEVDLSQD+R WE L+ DE+HFIT
Sbjct: 15 DEPLLSPNGDRFVMYPVRYQGVFEMYKKAVASFWTVEEVDLSQDMRDWEKLSDDERHFIT 74
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV+ENLA RFM EVQ+ EARAFYGFQIAIEN+HSEMYSLLL+ YI++ D
Sbjct: 75 HILAFFAASDGIVMENLAVRFMSEVQIPEARAFYGFQIAIENVHSEMYSLLLDHYIRDVD 134
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+K ++ RA +TVPCV KKA+WA WI G E+FAERL+AFACVEGI FSGSFCAIFWLKKR
Sbjct: 135 QKDKMLRAIQTVPCVGKKAEWAQRWIGGGESFAERLVAFACVEGIHFSGSFCAIFWLKKR 194
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLYS L++ L + V IV+EAVE+E EF C+AL
Sbjct: 195 LLMPGLTFSNELISRDEGLHTDFACLLYSQLQHPLDQAAVYRIVREAVELEHEFCCEALS 254
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CALVGMN LM QYI++VADRLL ALGC K+Y NPFDWME+ISLQGKTNFFE+RVGEY
Sbjct: 255 CALVGMNADLMRQYIDYVADRLLVALGCEKLYNTANPFDWMEMISLQGKTNFFERRVGEY 314
Query: 306 QKASVMSSLN--GNGGNHVFKMDEDF 329
Q+A VM+ G +VF MDEDF
Sbjct: 315 QRAGVMNGAQPAGERQAYVFTMDEDF 340
>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/323 (72%), Positives = 266/323 (82%), Gaps = 3/323 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NPDRFC+FPI++ ++WEMYKKAEASFWTAEEVDL+ D R W +L +E+HFI+H
Sbjct: 27 EPLLRDNPDRFCLFPIKHAKVWEMYKKAEASFWTAEEVDLTYDYRDWITLNDNEQHFISH 86
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENL +RFM +VQ+ EAR+FYGFQ+AIENIHSEMYSLLL+TYIK+ +
Sbjct: 87 VLAFFAASDGIVLENLCSRFMTDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKK 146
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KS LFRA TVP VAKKADWAL WI +FAERL+ FACVEGIFFSGSFCAIFWLKKRG
Sbjct: 147 KSDLFRAIHTVPTVAKKADWALKWIGSDASFAERLVGFACVEGIFFSGSFCAIFWLKKRG 206
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LM GLTFSNELISRDEGLHCDFACLLYS+L N LSE+ + +V +AV IE+EFVCDAL C
Sbjct: 207 LMRGLTFSNELISRDEGLHCDFACLLYSMLENPLSEKVLHQLVGDAVTIEKEFVCDALSC 266
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+LVGMN +MS YIEFVADRLL LG K+Y NPFDWMELISLQGK NFFE RV +YQ
Sbjct: 267 SLVGMNANMMSTYIEFVADRLLLQLGVSKLYNAVNPFDWMELISLQGKANFFEHRVDQYQ 326
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA VM G NH F+ D DF
Sbjct: 327 KAGVM---QGGEENHSFRTDCDF 346
>gi|428182355|gb|EKX51216.1| hypothetical protein GUITHDRAFT_66373 [Guillardia theta CCMP2712]
Length = 327
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/325 (71%), Positives = 268/325 (82%), Gaps = 2/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLLTPNP+RF +FPI+Y +WEMYKK EASFWT EEVDLSQD+ WE L +EKHFI H
Sbjct: 3 EPLLTPNPNRFVLFPIKYHAVWEMYKKHEASFWTVEEVDLSQDMIHWEKLNDNEKHFIKH 62
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA F E+Q+ EAR FYGFQIA+ENIHSEMYSLL++TY+++ E
Sbjct: 63 VLAFFAASDGIVLENLAGNFSTEIQIPEARCFYGFQIAMENIHSEMYSLLIDTYVRDPVE 122
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LFRA ETVP V KKADWA+ W+ +FA+RL+AFA VEGIFFSGSFCAIFWLKKRG
Sbjct: 123 KDKLFRAIETVPAVMKKADWAIRWMGEKCSFAKRLVAFAAVEGIFFSGSFCAIFWLKKRG 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGL FSNELISRDEGLH DFACL+YS+L NKLS E V I+ EAV+ E +FV +ALP
Sbjct: 183 LMPGLCFSNELISRDEGLHTDFACLIYSMLENKLSTEEVTQIITEAVDCETQFVTEALPV 242
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL ALG KVY V+NPF+WM++ISLQGKTNFFEKRVG+YQ
Sbjct: 243 DLIGMNAQLMSQYIEFVADRLLVALGQPKVYKVSNPFEWMDMISLQGKTNFFEKRVGDYQ 302
Query: 307 KASVMSSLN--GNGGNHVFKMDEDF 329
KA VMSS+N GNH F ++ DF
Sbjct: 303 KAGVMSSINKETGQGNHCFSLEHDF 327
>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS), partial
[Ostreococcus tauri]
Length = 382
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/323 (71%), Positives = 267/323 (82%), Gaps = 3/323 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NPDRFC+FPI++P +WEMYKKAEASFWTAEEVDL+ D + W++L +EKHF++H
Sbjct: 63 EPLLRDNPDRFCLFPIKHPRVWEMYKKAEASFWTAEEVDLTYDYKDWQTLNENEKHFVSH 122
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFA+SDGIVLENL +RFM +VQ+ EAR+FYGFQ+AIENIHSEMYSLLL+TYIK+ +
Sbjct: 123 VLAFFASSDGIVLENLCSRFMSDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKK 182
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KS LFRA TVP VA KADWAL+WI +F ERL+ FACVEGIFFSGSFCAIFWLKKRG
Sbjct: 183 KSELFRAIHTVPTVAMKADWALHWIGSDASFPERLVGFACVEGIFFSGSFCAIFWLKKRG 242
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LM GLTFSNELISRDEGLHCDFACLLY +L+N LSE + IV +AV+IE+EFVCDAL C
Sbjct: 243 LMRGLTFSNELISRDEGLHCDFACLLYGMLQNPLSEATLHHIVGDAVKIEKEFVCDALSC 302
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+LVGMN +MS YIEFVADRLL LG K++ NPFDWMELISLQGK NFFE RV +YQ
Sbjct: 303 SLVGMNADMMSTYIEFVADRLLIQLGASKLFNAVNPFDWMELISLQGKANFFEHRVDQYQ 362
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA VM ++ NH F+ D DF
Sbjct: 363 KAGVMGNVE---DNHAFRTDCDF 382
>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 338
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/326 (74%), Positives = 271/326 (83%), Gaps = 1/326 (0%)
Query: 5 PEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFI 64
PE L +RF MFPI+Y +IWEMYKKAEASFWTAEEVDLS D++ WE L+ DEKHFI
Sbjct: 13 PEPILDAAGSERFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMKHWEKLSDDEKHFI 72
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIVLENL RFM EVQ+ EARAFYGFQIAIENIHSEMYSLL++ YIK++
Sbjct: 73 SHILAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDAYIKDA 132
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+K LF A E +PCVAKKADWAL WI+ S TFAERLIAFAC+EGIFFSGSFC+I+WLKK
Sbjct: 133 AQKKYLFEAMENIPCVAKKADWALKWIESSATFAERLIAFACIEGIFFSGSFCSIYWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RG+MPGLTFSNELISRDEGLH DFACLLYS L+NK V+ IV EAVEIE+EFVCDAL
Sbjct: 193 RGMMPGLTFSNELISRDEGLHRDFACLLYSYLQNKPDVSIVRQIVCEAVEIEKEFVCDAL 252
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +LVGMN LMS+YIEFVAD LLG LG K Y NPF++MELISLQGKTNFFEKRVGE
Sbjct: 253 PVSLVGMNKDLMSEYIEFVADHLLGQLGLEKEYNTVNPFEFMELISLQGKTNFFEKRVGE 312
Query: 305 YQKASVMSSL-NGNGGNHVFKMDEDF 329
YQK+ VM SL GNGG F +DEDF
Sbjct: 313 YQKSGVMGSLGGGNGGTTNFSLDEDF 338
>gi|387789964|ref|YP_006255029.1| ribonucleotide reductase subunit beta [Solitalea canadensis DSM
3403]
gi|379652797|gb|AFD05853.1| ribonucleotide reductase, beta subunit [Solitalea canadensis DSM
3403]
Length = 323
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 271/324 (83%), Gaps = 5/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL N +RF + PI+YPEIWEMYKKAEASFWTAEE+DLS D++ WE+ E+HFI+
Sbjct: 5 QEPLLQENKERFVLLPIKYPEIWEMYKKAEASFWTAEEIDLSLDLKDWENFNDGERHFIS 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA FM EVQ+ EAR +YGFQI +ENIHSE Y+LL++TY+K++
Sbjct: 65 HVLAFFAASDGIVNENLAVNFMSEVQIPEARCYYGFQIMMENIHSETYALLIDTYVKDTA 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF A ETVPCV +KA+WAL WI+ TFAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKNRLFNAIETVPCVKQKAEWALRWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG HC+FACLLYS+L NKLSEERV I+ +AVEIE++F+ DALP
Sbjct: 184 GLMPGLTFSNELISRDEGSHCEFACLLYSMLINKLSEERVHQIITDAVEIEKQFITDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
AL+GMN LM QYIEFVADR L ALG K+Y TNPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 244 VALIGMNAKLMQQYIEFVADRWLNALGYSKIYNATNPFDFMEMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ V+S + N +F +DEDF
Sbjct: 304 QKSGVLSDKDSN----IFSLDEDF 323
>gi|255530602|ref|YP_003090974.1| ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
Length = 324
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 269/324 (83%), Gaps = 3/324 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE LL N DRF + PI+YPEIWEMYKK+EASFWTAEE+DLS D + W++L E+HFI+
Sbjct: 4 EEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHWDNLNDGERHFIS 63
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFF+ASDGIV ENLA FM EVQ+ EAR FYGFQI +ENIHSE Y+LL++TYIK+ D
Sbjct: 64 HILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIKDPD 123
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ETVPCV KKA+WAL WID +FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDRLFHAIETVPCVKKKAEWALRWIDNG-SFAERLVAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG HC+FACLLY +L+NKLS+E+V GI+++AVEIE+EFV DALP
Sbjct: 183 GLMPGLTFSNELISRDEGSHCEFACLLYGMLKNKLSQEQVHGIIRDAVEIEKEFVTDALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
AL+GMN LMSQYIEFVADR L LG K+Y TNPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 243 VALIGMNAKLMSQYIEFVADRWLQELGYSKIYNATNPFDFMEMISLQGKTNFFEKRVGDY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ V++S F +D+DF
Sbjct: 303 QKSGVLTSTEDKAA--AFSLDDDF 324
>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
Length = 324
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/324 (70%), Positives = 268/324 (82%), Gaps = 3/324 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE LL N DRF + PI+YPEIWEMYKK+EASFWTAEE+DLS D + W++L E+HFI+
Sbjct: 4 EEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHWDNLNDGERHFIS 63
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFF+ASDGIV ENLA FM EVQ+ EAR FYGFQI +ENIHSE Y+LL++TYIK+ +
Sbjct: 64 HILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIKDPE 123
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ETVPCV KKA+WAL WID FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDRLFHAIETVPCVKKKAEWALRWIDNG-NFAERLVAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG HC+FACLLYS+L+NKLSEE V GI+++AVEIE+EFV DALP
Sbjct: 183 GLMPGLTFSNELISRDEGSHCEFACLLYSMLKNKLSEEHVHGIIRDAVEIEKEFVTDALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
AL+GMN LMSQYIEFVADR L LG K+Y TNPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 243 VALIGMNAKLMSQYIEFVADRWLQELGYTKIYHATNPFDFMEMISLQGKTNFFEKRVGDY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ V++S F +D+DF
Sbjct: 303 QKSGVLTSSEDKAA--AFSLDDDF 324
>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
Length = 399
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/325 (70%), Positives = 273/325 (84%), Gaps = 2/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+DI WE L ++EKHF++
Sbjct: 76 EEPLLRDNPRRFVVFPIQYNDIWQMYKKAEASFWTAEEVDLSKDISDWEKLKSEEKHFVS 135
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF KEVQV+EAR FYG+QIA+ENIHSEMYSLL++TY+K+
Sbjct: 136 HVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGYQIAVENIHSEMYSLLIDTYVKDPT 195
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV +KADWAL WI D +F ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 196 ERDFLFNAIETMPCVKEKADWALRWINDEQSSFGERVVAFAAVEGIFFSGSFASIFWLKK 255
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RG+MPGLTFSNELISRDEGLHCDFACL++S L+NK S+ERV I+++AV IE+ F+ +AL
Sbjct: 256 RGVMPGLTFSNELISRDEGLHCDFACLMFSHLKNKPSQERVYDIIRDAVRIEQSFLTEAL 315
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL LGC K++ V NPFD+M+ ISL+GKTNFFEKRVGE
Sbjct: 316 PVNLIGMNCKLMAQYIEFVADRLLLELGCPKIWNVENPFDFMDNISLEGKTNFFEKRVGE 375
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK VMSS +G GG+H F ++EDF
Sbjct: 376 YQKMGVMSSQSG-GGSHQFSLEEDF 399
>gi|72008642|ref|XP_780110.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 412
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/326 (70%), Positives = 267/326 (81%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL N RF +FPIQY +IW+ YKKAEASFWTAEEVDLS+D+ W +L +E+HFI+
Sbjct: 87 DEPLLRENARRFVIFPIQYHDIWQFYKKAEASFWTAEEVDLSKDLDHWANLKDEERHFIS 146
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIAIENIHSEMYSLL++TYIK+S
Sbjct: 147 HVLAFFAASDGIVNENLVERFSQEVQVAEARCFYGFQIAIENIHSEMYSLLIDTYIKDSV 206
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV KKA WALNWI S F R++AFA VEGIFFSGSF AIFWLKK
Sbjct: 207 QRDFLFNAVETLPCVTKKAQWALNWIGSDSADFGTRIVAFAAVEGIFFSGSFAAIFWLKK 266
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK EE V+GI+KEAV IE+EF+ DAL
Sbjct: 267 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLNNKPDEEHVQGIIKEAVAIEQEFLTDAL 326
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC+L+GMN LM +YIEFVADRLL LGCGK++ V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 327 PCSLIGMNAVLMKRYIEFVADRLLVELGCGKIWKVENPFDFMENISLEGKTNFFEKRVGE 386
Query: 305 YQKASVMSSLNGN-GGNHVFKMDEDF 329
YQK VMSS N + H F ++EDF
Sbjct: 387 YQKMGVMSSTNSSTKKQHTFSLEEDF 412
>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
siliculosus]
Length = 504
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/324 (69%), Positives = 267/324 (82%), Gaps = 1/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+ +P RF +FPI++PE+W+MYKKA+ASFWT EEVDLSQD R WE+LT +E+HFI+
Sbjct: 181 EPICRADPSRFVLFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWEALTGNEQHFISM 240
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV+ENL RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIK+ E
Sbjct: 241 VLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQE 300
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A+ +PCV +KADWA+ WI TFAERL+AFA VEG+FFSGSFCAIFWLKKRG
Sbjct: 301 RDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRG 360
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNE+ISRDEGLHCDFAC L++ L NK S E V IV+EAVE+E+ F+C ALPC
Sbjct: 361 LMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPC 420
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +MSQYIEFVADRLLG+LG GK YG NPFDWM+LISLQGKTNFFEKRVGEYQ
Sbjct: 421 SLIGMNAGVMSQYIEFVADRLLGSLGYGKSYGTQNPFDWMDLISLQGKTNFFEKRVGEYQ 480
Query: 307 KASVMSSLNGNGGNHV-FKMDEDF 329
KA VM G G + F++D DF
Sbjct: 481 KAGVMGGGGGPGEDRRNFRLDADF 504
>gi|424513798|emb|CCO66420.1| Ribonucleotide reductase subunit [Bathycoccus prasinos]
Length = 517
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/325 (71%), Positives = 260/325 (80%), Gaps = 2/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL PN DRF +FP++YP IWE YKKAEASFWTAEE+DL+ D R W +L +E+HFIT
Sbjct: 194 EEPLLMPNEDRFTLFPMKYPRIWEYYKKAEASFWTAEEIDLTYDYRDWITLNENEQHFIT 253
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENL RFMKE+QV EARAFY FQ +IENIHSE Y+LLLETY+K+
Sbjct: 254 HVLAFFAASDGIVLENLCVRFMKEIQVPEARAFYAFQQSIENIHSETYALLLETYVKDPI 313
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+K LFRA T+P V KKADWA+ WI+ S FAERL+ FACVEGIFFSGSFCAIFWLKK
Sbjct: 314 QKRNLFRAIHTIPTVKKKADWAMKWIESSSARFAERLVGFACVEGIFFSGSFCAIFWLKK 373
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEGLHCDFAC LYS L++KLSEE + IV AV IE+EFVCDAL
Sbjct: 374 RGLMKGLTFSNELISRDEGLHCDFACELYSELKHKLSEEELHEIVSNAVAIEKEFVCDAL 433
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
CALVGMN LMS Y+EFVADRLL LG K Y NPFDWME ISLQGK NFFE RV +
Sbjct: 434 SCALVGMNADLMSDYVEFVADRLLVQLGASKYYNAQNPFDWMETISLQGKANFFEHRVDQ 493
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM++ N + + F+ D DF
Sbjct: 494 YQKAGVMNN-NADAQHFEFRTDCDF 517
>gi|373954256|ref|ZP_09614216.1| ribonucleotide reductase [Mucilaginibacter paludis DSM 18603]
gi|373890856|gb|EHQ26753.1| ribonucleotide reductase [Mucilaginibacter paludis DSM 18603]
Length = 343
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/327 (70%), Positives = 265/327 (81%), Gaps = 4/327 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S E LL N DRF + PI YP+IWEMYKK EASFWTAEE+DLS D++ W +L E+H
Sbjct: 21 SQENELLLRENKDRFVILPINYPQIWEMYKKHEASFWTAEEIDLSDDMKDWNNLNDGERH 80
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+H+LAFFAASDGIV ENLA FM EVQ+ EAR FYGFQI +ENIHSE Y+LL++TYIK
Sbjct: 81 FISHILAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIK 140
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
++ EK+RLF A ETVPCV KK +WAL WI+ TFAERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 141 DTTEKNRLFHAIETVPCVKKKGEWALKWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWL 199
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEG+HC+FACLLYS+L NKLS+E V I+ +AVEIE+EFV D
Sbjct: 200 KKRGLMPGLTFSNELISRDEGMHCEFACLLYSMLSNKLSKEAVTTIIADAVEIEKEFVTD 259
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LMSQYIEFVADR L LG K+Y TNPFD+ME+ISLQGKTNFFEKRV
Sbjct: 260 ALPVNLIGMNAKLMSQYIEFVADRWLQELGYDKLYHATNPFDFMEMISLQGKTNFFEKRV 319
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
G+YQK+ V LN + + F MDEDF
Sbjct: 320 GDYQKSGV---LNNDAKSQAFSMDEDF 343
>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
Length = 330
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/331 (70%), Positives = 267/331 (80%), Gaps = 3/331 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTAD 59
M + EPLL +RF +FPIQ +IW+MYK+AEASFWTAEE+DL+QD++ W E L D
Sbjct: 1 MSNTVSEPLLESVDNRFVLFPIQQNDIWQMYKQAEASFWTAEEIDLAQDLKDWDEKLNDD 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFITHVLAFFAASDGIV ENLA F++EV+ EAR FYGFQ+AIENIH+E YSLL++T
Sbjct: 61 ERHFITHVLAFFAASDGIVNENLAVNFLEEVKSPEARCFYGFQVAIENIHAETYSLLIDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++DEK RLF A ETVPCV KKA+WAL WID +FAERLIAFA VEGIFFSGSFC+I
Sbjct: 121 YIKDADEKHRLFNALETVPCVKKKAEWALRWIDKG-SFAERLIAFAAVEGIFFSGSFCSI 179
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIERE 238
FWLKKRGLMPGL+FSNELISRDEGLHCDFACLLY S ++NKL E V I+K AVEIE+E
Sbjct: 180 FWLKKRGLMPGLSFSNELISRDEGLHCDFACLLYNSYIKNKLPNETVVSIIKNAVEIEKE 239
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
FV DALP L+GMN LMS+YIEFVADRLL LGC K Y NPFD+ME+ISL+GKTNFF
Sbjct: 240 FVTDALPVKLIGMNSDLMSEYIEFVADRLLVELGCEKQYNTANPFDFMEMISLEGKTNFF 299
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRV EY KA V + GNH F MDEDF
Sbjct: 300 EKRVSEYSKAGVANKPASGQGNHSFSMDEDF 330
>gi|392334327|ref|XP_003753140.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Rattus norvegicus]
gi|392354916|ref|XP_003751887.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Rattus norvegicus]
Length = 390
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/329 (69%), Positives = 268/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
M2 (Ribonucleotide reductase small subunit)
(Ribonucleotide reductase small chain) [Ciona
intestinalis]
Length = 393
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 266/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ WE+L +E+ FI+
Sbjct: 73 EEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMVHWEALKPNERKFIS 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIAIENIHSEMYSLL+ TYI+++
Sbjct: 133 HVLAFFAASDGIVNENLVERFAQEVQITEARFFYGFQIAIENIHSEMYSLLINTYIRDTH 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKA+WAL WI SE T+AER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 193 EREFLFNAIETLPCVRKKAEWALKWISDSESTYAERIIAFASVEGIFFSGSFAAIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE RV IVK+AV IE+EF+ DAL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEARVVEIVKDAVTIEQEFLTDAL 312
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRLL LGC KV+ V NPFD+MELISL+GKTNFFEKRVGE
Sbjct: 313 PVALIGMNNKLMKQYIEFVADRLLVELGCSKVFKVENPFDFMELISLEGKTNFFEKRVGE 372
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+ + F +D DF
Sbjct: 373 YQKAGVMA----KAEDMKFTLDADF 393
>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/329 (70%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P I +EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D+R WESL A+EK
Sbjct: 62 PRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWESLKAEEK 121
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF KEVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 181
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKEREYLFNAIETLPCVKKKADWALRWIGDKQATYGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV ++ +AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEERVVQLITDAVQIEQEFL 301
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG KV+ TNPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKATNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VMS N F +D DF
Sbjct: 362 KVGEYQKMGVMSKPKDN----TFTLDADF 386
>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/329 (70%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P I +EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D+R WESL A+EK
Sbjct: 62 PRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWESLKAEEK 121
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 181
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKEREYLFNAIETLPCVKKKADWALRWISDKQATYGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV ++ +AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEERVVQLITDAVQIEQEFL 301
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG KV+ TNPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKATNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VMS N F +D DF
Sbjct: 362 KVGEYQKMGVMSKPKDN----TFTLDADF 386
>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
gi|77416595|sp|Q4KLN6.1|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
Length = 390
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 268/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|452819577|gb|EME26633.1| ribonucleoside-diphosphate reductase subunit M2 [Galdieria
sulphuraria]
Length = 464
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/323 (70%), Positives = 265/323 (82%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + RF +FPI+Y +IWE+YK+AEASFWT EEVDLSQD+R W SL + E+HFI+H
Sbjct: 146 EPLLLEDTSRFVLFPIRYRQIWELYKRAEASFWTVEEVDLSQDLRDWNSLHSSEQHFISH 205
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLAARF EVQV EAR FYGFQ+A+EN+HSEMY+LL++TYI++ E
Sbjct: 206 VLAFFAASDGIVNENLAARFSTEVQVPEARCFYGFQMAMENVHSEMYALLIDTYIRDMAE 265
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K RLF A E + CV KKADW+L WI S +FAERL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 266 KRRLFYAIENLTCVKKKADWSLKWIRCSSSFAERLVAFAAVEGIFFSGSFCSIFWLKKRG 325
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHC+FACLLYSLL++ LS+ERV I+ +AV+ E+EF+ DALP
Sbjct: 326 LMPGLTFSNELISRDEGLHCEFACLLYSLLQHPLSQERVTEIIVDAVDHEKEFILDALPV 385
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
AL+GMN LMSQYIE+ ADRLL ALG Y V+NPFDWMELISLQGKTNFFE+RVGEYQ
Sbjct: 386 ALIGMNAGLMSQYIEYCADRLLQALGYRSYYQVSNPFDWMELISLQGKTNFFERRVGEYQ 445
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
A VM + VF+ D DF
Sbjct: 446 MAGVM----ARKEDQVFRTDLDF 464
>gi|266918|sp|P07201.2|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit;
AltName: Full=p41
gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
solidissima]
Length = 384
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 266/324 (82%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF + PIQY +IW+MYKKAEASFWTAEEVDLS+D+ WESL +EKHFI+H
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF KEVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV +KADWA+ WI D S ++AER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++S L NK S+ER+ I+ EAV+IE+ F+ +ALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYIEFVADRLL L C K+Y NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEY 361
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VMS N G +H F +D DF
Sbjct: 362 QKMGVMSGGN-TGDSHAFTLDADF 384
>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Danio rerio]
gi|3914657|sp|P79733.1|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase protein R2 class
I; AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
gi|347311297|gb|AEO79839.1| reductase M2 polypeptide variant 1 [Danio rerio]
gi|347311299|gb|AEO79840.1| reductase M2 polypeptide variant 2 [Danio rerio]
gi|347311301|gb|AEO79841.1| reductase M2 polypeptide variant 3a [Danio rerio]
gi|347311303|gb|AEO79842.1| reductase M2 polypeptide variant 3b [Danio rerio]
Length = 386
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/328 (70%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE VK I+ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
30864]
Length = 352
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/325 (70%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL PNP RF +FPIQY ++W+MYKKAEASFWTAEEVDLS+D+ W+ L ++E+HFI+
Sbjct: 32 DEPLLKPNPHRFVLFPIQYHDVWKMYKKAEASFWTAEEVDLSKDLNDWDKLKSEERHFIS 91
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ E R+FY FQIAIENIHSEMYSLL++ YIK+S
Sbjct: 92 HVLAFFAASDGIVNENLLLRFSTEVQIPEVRSFYCFQIAIENIHSEMYSLLIDMYIKDSA 151
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ +LF A ET+PCVAKKA WAL WI D TFA RLIAFA VEGIFFSGSF AIFWLKK
Sbjct: 152 EREKLFNAIETLPCVAKKAQWALRWISDRRSTFAHRLIAFAAVEGIFFSGSFAAIFWLKK 211
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFAC+L+ LL N+ S V I+K+AV IE+EF+ DAL
Sbjct: 212 RGLMPGLTFSNELISRDEGLHCDFACMLFGLLNNRPSNADVLAIIKDAVAIEQEFLTDAL 271
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMNG LM YIEFVADRLL ALG K Y V NPFD+M+LISLQGKTNFFE+RVGE
Sbjct: 272 PVALIGMNGGLMKTYIEFVADRLLVALGQEKHYKVENPFDFMDLISLQGKTNFFERRVGE 331
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK VMS+ + H F +D DF
Sbjct: 332 YQKPGVMSTKD----EHRFTLDADF 352
>gi|354494802|ref|XP_003509524.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cricetulus griseus]
gi|344243911|gb|EGW00015.1| Ribonucleoside-diphosphate reductase subunit M2 [Cricetulus
griseus]
Length = 390
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 268/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
Length = 378
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/324 (69%), Positives = 269/324 (83%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W++L +E+HF++H
Sbjct: 57 EPLLRSNPSRFVLFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLKDWDNLQPNERHFVSH 116
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR FYGFQIA+ENIHSEMYSLL+ETYIK+S E
Sbjct: 117 VLAFFAASDGIVNENLVERFAQEVQVPEARCFYGFQIAMENIHSEMYSLLIETYIKDSAE 176
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++RLF A ET+PC+AKKA+WA+ WI + ++ER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 177 RTRLFNAVETMPCIAKKAEWAMKWIGNKDAPYSERIVAFAAVEGIFFSGSFAAIFWLKKR 236
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFAC+++ L NK +ER+ I+ AV+IE+EF+ DALP
Sbjct: 237 GLMPGLTFSNELISRDEGLHTDFACVMFKHLVNKPPKERIIEIINNAVKIEQEFLTDALP 296
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEK+VGEY
Sbjct: 297 VEMIGMNCRLMRQYIEFVADRLLLELGCTKLYNSENPFDFMEHISLEGKTNFFEKKVGEY 356
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM+S GN HVF +DEDF
Sbjct: 357 QKAGVMNS-KGNSA-HVFTLDEDF 378
>gi|339246545|ref|XP_003374906.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
Length = 366
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF + P++YP+IW MYKKAEASFWT EEVDL +D W L DEKHFI+
Sbjct: 46 EEPLLRSNPKRFVLLPLEYPDIWAMYKKAEASFWTVEEVDLRKDANDWAKLNKDEKHFIS 105
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +E+QV+EAR FYGFQIAIEN+HSEMYSLL++TYI++
Sbjct: 106 HVLAFFAASDGIVFENLVERFSQEIQVTEARFFYGFQIAIENVHSEMYSLLIDTYIRDPV 165
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWAL WI D F ERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 166 ERDFLFNAIETIPCVKKKADWALRWIGDRQSPFCERLVAFAAVEGIFFSGSFASIFWLKK 225
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLYS L+ K +E+RV+ I+ EAV IE+EF+ DAL
Sbjct: 226 RGLMPGLTFSNELISRDEGLHCDFACLLYSHLKKKPTEDRVRQIITEAVSIEQEFLTDAL 285
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMSQYIE+VADRLL LGC KVY NPFD+ME+ISL+GKTNFFEKRVGE
Sbjct: 286 PVRLIGMNCVLMSQYIEYVADRLLVELGCSKVYNSENPFDFMEMISLEGKTNFFEKRVGE 345
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+ + VF +D +F
Sbjct: 346 YQKAGVMA----DRSQQVFTLDAEF 366
>gi|347311305|gb|AEO79843.1| reductase M2 polypeptide variant 3c [Danio rerio]
Length = 357
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/328 (70%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 34 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 93
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 94 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 153
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 154 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 213
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE VK I+ AVEIE+EF+
Sbjct: 214 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 273
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 274 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 333
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 334 VGEYQRMGVMSGTTDN----TFTLDADF 357
>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
Length = 386
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/328 (70%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEE VK I+ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLISKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>gi|409097319|ref|ZP_11217343.1| ribonucleoside-diphosphate reductase [Pedobacter agri PB92]
Length = 323
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/326 (68%), Positives = 265/326 (81%), Gaps = 3/326 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +E LL N DRF + PI+YP IWEMYKK EASFWTAEE+DLS D + W++L E+HF
Sbjct: 1 MEQELLLQENKDRFVLLPIKYPAIWEMYKKTEASFWTAEEIDLSDDQKHWDNLNDGERHF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+H+LAFF+ASDGIV ENLA FM EVQ+ EAR FYGFQI +ENIH+E Y+LL++TYIK+
Sbjct: 61 ISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHAETYALLIDTYIKD 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+EK RLF A +TVP V +KA+WAL WI+ TFAERL+AFA VEGIFFSGSFC+IFWLK
Sbjct: 121 PEEKDRLFHAIDTVPAVKRKAEWALRWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWLK 179
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG HC+FACLLYS+L NKLSEE V I+ +AVEIE+EF+ DA
Sbjct: 180 KRGLMPGLTFSNELISRDEGSHCEFACLLYSMLSNKLSEEAVHSIISDAVEIEKEFITDA 239
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LMSQYIEFVADR L LG K+Y TNPFD+ME+ISLQGKTNFFEKRVG
Sbjct: 240 LPVALIGMNAKLMSQYIEFVADRWLQELGYKKIYNATNPFDFMEMISLQGKTNFFEKRVG 299
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQK+ V++S + F +DEDF
Sbjct: 300 DYQKSGVLTSADNKA--QAFSLDEDF 323
>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
Length = 324
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/324 (69%), Positives = 266/324 (82%), Gaps = 3/324 (0%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
+L N DRFC+FPI+ +W+MYK+AEASFW+AEE+DLS D + W +L +E+HFI+HVL
Sbjct: 1 MLQDNEDRFCLFPIKEHAVWKMYKQAEASFWSAEEIDLSMDYKDWVTLNDNEQHFISHVL 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFAASDGIVLENL RFMK+VQ+ EARAFY FQ+AIENIHSE Y LL++TY+K+S +K
Sbjct: 61 AFFAASDGIVLENLGLRFMKDVQLPEARAFYAFQLAIENIHSETYGLLIDTYVKDSVKKR 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LFRA VP VA+KA WAL WI SE FAERL+AFACVEGIFFSGSFCAIFWLKKRGLM
Sbjct: 121 HLFRAIHNVPTVARKAQWALKWIQSSECFAERLVAFACVEGIFFSGSFCAIFWLKKRGLM 180
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCAL 248
GLTFSNELISRDEGLHCDFACLLYS+L++ L R++ IVK+AV+IE+EFVCDAL CAL
Sbjct: 181 RGLTFSNELISRDEGLHCDFACLLYSMLKHPLDPARLQEIVKDAVDIEKEFVCDALSCAL 240
Query: 249 VGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
VGMN LMS+YIEFVADRL+ LG KV+ NPF+WME+ISLQGK NFFE RV +YQKA
Sbjct: 241 VGMNADLMSEYIEFVADRLMTQLGVEKVWNTPNPFEWMEMISLQGKANFFEHRVDQYQKA 300
Query: 309 SVMSSLNGNGG---NHVFKMDEDF 329
+VM+S+ G N+VF+ D DF
Sbjct: 301 NVMTSVQGKCDGFENYVFRTDLDF 324
>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/325 (70%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI+ PEIW+MYKKAEASFWTAEE+DL++D++ WESL+ +E+HF++
Sbjct: 15 EEPLLKENPGRFVLFPIKEPEIWKMYKKAEASFWTAEEIDLAEDLKDWESLSINERHFVS 74
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL F EV +EAR FYGFQIA+ENIHSE YSLL++TYIK++
Sbjct: 75 HVLAFFAASDGIVNENLTGNFSTEVTSAEARCFYGFQIAVENIHSETYSLLIDTYIKDAQ 134
Query: 126 EKSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK L A ETVPCV KKA+WAL W D G+ +FAER IAFA VEGIFFSGSFCAIFWLKK
Sbjct: 135 EKDHLLNAIETVPCVQKKANWALRWCDAGNASFAERCIAFAAVEGIFFSGSFCAIFWLKK 194
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL FSNELISRDEGLHCDFACL+YS L N+L E R++ I+ AVEIE+EFV DAL
Sbjct: 195 RGLMPGLCFSNELISRDEGLHCDFACLIYSKLVNQLPESRIEEIITNAVEIEKEFVSDAL 254
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEF ADRLLGALGC K Y NPF+WME+ISLQGKTNFFEKRVGE
Sbjct: 255 PVELIGMNSKLMCQYIEFCADRLLGALGCKKHYMAVNPFEWMEMISLQGKTNFFEKRVGE 314
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
Y K+ V N + VF +D DF
Sbjct: 315 YAKSGV----GVNKDDQVFSIDADF 335
>gi|452822363|gb|EME29383.1| ribonucleotide reductase small subunit [Galdieria sulphuraria]
Length = 375
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/317 (69%), Positives = 264/317 (83%), Gaps = 3/317 (0%)
Query: 13 NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFA 72
+ +R+ +FPI++PEIW+MYKK EASFWTAEE+DLS D+ W+ L ADE+HFI+HVLAFFA
Sbjct: 62 SSERYTLFPIRHPEIWKMYKKHEASFWTAEEIDLSSDLEDWKKLNADERHFISHVLAFFA 121
Query: 73 ASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+SDGIVLENLA RF ++VQ+ EAR FYGFQIA+ENIHSE YSLL++TYI+++ EK+RLF
Sbjct: 122 SSDGIVLENLAERFCRDVQIPEARCFYGFQIAMENIHSETYSLLIDTYIRDAQEKARLFE 181
Query: 133 AFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLT 192
A E +PC+ KKA WAL WI S +FAERL+AFA VEGIFFSGSFC+IFWLKKRGLMPGLT
Sbjct: 182 AMERIPCIEKKAQWALRWIQSSASFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPGLT 241
Query: 193 FSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
FSNELISRDEGLHCDFACLLYSLL KL E ++ I+ +AV E+EF+C++LP AL+GMN
Sbjct: 242 FSNELISRDEGLHCDFACLLYSLLPEKLPRETIEAIIVDAVSCEKEFICESLPVALIGMN 301
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMS 312
+MSQYIEFVADRLL ALG K + NPFDWMELISL+GKTNFFEKRVGEYQKA V
Sbjct: 302 SDMMSQYIEFVADRLLVALGYEKYFQSRNPFDWMELISLEGKTNFFEKRVGEYQKAGV-- 359
Query: 313 SLNGNGGNHVFKMDEDF 329
+N +G F++D DF
Sbjct: 360 -VNDSGEAQEFRLDADF 375
>gi|347311307|gb|AEO79844.1| reductase M2 polypeptide variant 3d [Danio rerio]
Length = 334
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/328 (70%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 11 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 70
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 71 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 130
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 131 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 190
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE VK I+ AVEIE+EF+
Sbjct: 191 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 250
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 251 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 310
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 311 VGEYQRMGVMSGTTDN----TFTLDADF 334
>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
Length = 323
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 268/325 (82%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPIQ+ +IW+ YKKAEASFWTAEEVDLS D+ W++ L DE++FI+
Sbjct: 3 EPILQNNKNRFVIFPIQHDDIWQFYKKAEASFWTAEEVDLSSDMNDWQNKLNKDERYFIS 62
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F++EVQ EAR FYGFQI IENIHSEMYSLL++TYIK+
Sbjct: 63 HVLAFFAASDGIVNENLAVNFVQEVQYPEARFFYGFQIMIENIHSEMYSLLIDTYIKDPK 122
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK L RA ET+PCV KKADWAL WI+ S+ FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 123 EKDHLLRAIETIPCVGKKADWALEWIE-SDNFAERLIAFAAVEGIFFSGSFCSIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY + L+NKL EE V+ I+ +AVE+E+EFV +AL
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLLYVNHLKNKLPEETVQKIIADAVEVEKEFVTEAL 241
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL ALGC KV+ TNPFD+MELISLQGKTNFFE+RVGE
Sbjct: 242 PVRLIGMNAELMCQYIEFVADRLLDALGCKKVWNATNPFDFMELISLQGKTNFFERRVGE 301
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ V G N+ F +DEDF
Sbjct: 302 YQKSGVAQ---GEKQNYSFSLDEDF 323
>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
Length = 386
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/329 (69%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL +EK
Sbjct: 62 PRLEDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKKEEK 121
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF KEVQV+EAR FYGFQIA+ENIHSEMYSLL++TY+
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYV 181
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL+WI D TF ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKEREYLFNAIETLPCVKKKADWALHWIGDKQATFGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV ++ +AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVVELITDAVQIEQEFL 301
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG KV+ TNPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFKKVFKATNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VMS N F +D DF
Sbjct: 362 KVGEYQKMGVMSKAKDN----TFTLDADF 386
>gi|397531939|gb|AFO54479.1| ribonucleotide reductase small subunit R2ii [Carassius carassius]
Length = 386
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 266/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 63 AVEEEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DPKERDFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE VK I+ AV IE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEETVKKIIVNAVAIEQEFLT 302
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYKVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F++D DF
Sbjct: 363 VGEYQRMGVMSGSTDN----TFRLDADF 386
>gi|397531937|gb|AFO54478.1| ribonucleotide reductase small subunit R2i [Carassius carassius]
Length = 385
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 266/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 62 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 121
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 122 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 181
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 182 DPKEREFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFW 241
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE VK I+ AVEIE+EF+
Sbjct: 242 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEATVKKIIMNAVEIEQEFLT 301
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 302 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYKVENPFDFMENISLEGKTNFFEKR 361
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F++D DF
Sbjct: 362 VGEYQRMGVMSGPTDN----TFRLDADF 385
>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
gi|132626|sp|P11157.1|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Oxidizing Conditions. A Fully Occupied
Dinuclear Iron Cluster.
gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Reducing Conditions. A Fully Occupied
Dinuclear Iron Cluster And Bound Acetate.
gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
Length = 390
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K +E+RV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
Length = 386
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P +EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+DI+ WESL DE+
Sbjct: 62 PRFTDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKTDER 121
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF KEVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 181
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKERGFLFNAIETLPCVKKKADWALRWISDKQATYGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV ++ AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFRHLVHKPSEERVVQLITNAVQIEQEFL 301
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG KV+ +NPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKASNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQK VMS N F +D DF
Sbjct: 362 RVGEYQKMGVMSKPKDN----TFTLDADF 386
>gi|335306880|ref|XP_003360612.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Sus
scrofa]
Length = 401
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/329 (69%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 77 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 136
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 137 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 196
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 197 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 256
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 257 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 316
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG GKV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 317 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 376
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 377 RVGEYQRMGVMSSPTENS----FTLDADF 401
>gi|440894701|gb|ELR47090.1| Ribonucleoside-diphosphate reductase subunit M2 [Bos grunniens
mutus]
Length = 383
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L ++E+
Sbjct: 59 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEER 118
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 119 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 178
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D + T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 179 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIF 238
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 239 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 298
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN +LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 299 TEALPVKLIGMNCSLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 358
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 359 RVGEYQRMGVMSSPTENS----FTLDADF 383
>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
Length = 411
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 87 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 146
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 147 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 206
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 207 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 266
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K +E+RV+ I+ AV IE+EF+
Sbjct: 267 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 326
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 327 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 386
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 387 RVGEYQRMGVMS----NSTENSFTLDADF 411
>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/338 (66%), Positives = 271/338 (80%), Gaps = 13/338 (3%)
Query: 5 PEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFI 64
P E LL NP R+ MFPI+Y IWEMYKK EASFWTAEE+DLSQD+R WE+L+ +++HFI
Sbjct: 13 PMEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWENLSDNDRHFI 72
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIVLENL+A+F EVQ EARAFYGFQIA+ENIHSE YSLL++ YIK+
Sbjct: 73 SHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKDP 132
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++K ++FRA ETVP V KKA+WAL+WI+ FAERLIAFACVEGI FSGSFCAI+WLKK
Sbjct: 133 EQKDKIFRAIETVPSVRKKAEWALSWINDDNCFAERLIAFACVEGILFSGSFCAIYWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-NKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEGLH DFACLLY++L+ +L +ERV IV+ AVE+ER F+ ++
Sbjct: 193 RGLMPGLTFSNELISRDEGLHADFACLLYNMLKYTRLPDERVHEIVRGAVEVERVFISES 252
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM +YIEFVADRLL ALG K+Y TNPFDWM++ISLQGKTNFFEKRVG
Sbjct: 253 LPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNATNPFDWMKMISLQGKTNFFEKRVG 312
Query: 304 EYQKASVMSSLNGNGGNHV------------FKMDEDF 329
EYQK VM+ + + + F +DEDF
Sbjct: 313 EYQKGGVMAGTAAHKNSSMDAEERRKSIGADFALDEDF 350
>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
Length = 331
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/330 (68%), Positives = 266/330 (80%), Gaps = 3/330 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
+ + +EP+L N DRF +FPIQ+ +IWE YK AEASFWTAEE+DLSQD + WE+LT E
Sbjct: 4 VTTFQDEPILKENKDRFVLFPIQHKDIWEFYKMAEASFWTAEEIDLSQDQKDWENLTEGE 63
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
HFI HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+EN+HSE YSLL++TY
Sbjct: 64 THFIKHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAMENVHSETYSLLIDTY 123
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
+K++ EK +LF A +T+ CV KKADWAL WID +AERLIAFA VEGIFFSGSFC+IF
Sbjct: 124 VKDNKEKDKLFNAIDTMDCVKKKADWALRWIDEG-NYAERLIAFAAVEGIFFSGSFCSIF 182
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREF 239
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L NKLS+E+V I+ +AVEIE+EF
Sbjct: 183 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYNDHLVNKLSKEKVTAIITDAVEIEKEF 242
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
V D+LP L+GMN LM QYIEFVADRLL L C KVYG +NPFD+ME+ISLQGKTNFFE
Sbjct: 243 VTDSLPVKLIGMNADLMCQYIEFVADRLLQELRCDKVYGSSNPFDFMEMISLQGKTNFFE 302
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
KRVG+YQKA VM + F +DEDF
Sbjct: 303 KRVGDYQKAGVMKK-EEDSDKAKFSLDEDF 331
>gi|348553865|ref|XP_003462746.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cavia porcellus]
Length = 484
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/329 (69%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 160 PSVEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 219
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 220 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 279
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 280 KDSREREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 339
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L ++ SE+RVK I+ AV IE+EF+
Sbjct: 340 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHRPSEQRVKEIIVNAVRIEQEFL 399
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG GKV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 400 TEALPVKLIGMNCELMKQYIEFVADRLMLELGFGKVFQVENPFDFMENISLEGKTNFFEK 459
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 460 RVGEYQRMGVMSSPTENS----FTLDADF 484
>gi|348518323|ref|XP_003446681.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Oreochromis niloticus]
Length = 391
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 267/325 (82%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E++FI+
Sbjct: 71 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYFIS 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RFM+EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 131 HVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWALNWI + + T+ ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK +E V I+K AVEIE+EF+ DAL
Sbjct: 251 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +M QYIEFVADRLL LG K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 311 PVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKRVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM++ N F++D DF
Sbjct: 371 YQRMGVMAAPTDN----TFRLDADF 391
>gi|156545974|ref|XP_001606963.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Nasonia vitripennis]
Length = 388
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/324 (70%), Positives = 262/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQ+P+IW MYKKAEASFWT EEVDLS+D+ W L +E+HFI+H
Sbjct: 67 EPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADWNRLNDNERHFISH 126
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIENIHSEMYSLL++TYI ++ +
Sbjct: 127 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQ 186
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCVAKKA+WALNWI S TFAER+IAFA VEGIFFSGSF AIFWLKKR
Sbjct: 187 RQFLFNAIETLPCVAKKANWALNWISHDSATFAERVIAFAAVEGIFFSGSFAAIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ + K SEERV I+K+AV IE+EF+ DALP
Sbjct: 247 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSEERVISIIKDAVTIEQEFLTDALP 306
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM QYIEFVADRLLG LGC KVY NPFD+ME ISL+GKTNFFEK+VGEY
Sbjct: 307 VEMIGMNCRLMCQYIEFVADRLLGELGCPKVYNSENPFDFMEHISLEGKTNFFEKKVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM G N F ++ DF
Sbjct: 367 QKWGVMQDRTGTENN--FSLEADF 388
>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila]
gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila SB210]
Length = 376
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 266/324 (82%), Gaps = 4/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP+RF +FPI+Y ++WEMYKK ASFWTA+E+DL QD++ WE LT +E+HFI
Sbjct: 57 DEPLLKDNPNRFVLFPIKYNKVWEMYKKELASFWTADEIDLYQDLKDWERLTDNERHFIK 116
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA +FM EVQ+ EARAFYGFQIA+ENIHSE YSLL++TYIK+
Sbjct: 117 YVLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIAMENIHSETYSLLIDTYIKDEV 176
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF+A + VP + KKA WAL WI+ ++ FA RLIAFA +EGIFFSGSFCAIFWLKKR
Sbjct: 177 EKDYLFKASQNVPVIHKKAQWALKWINNNDNFASRLIAFAAIEGIFFSGSFCAIFWLKKR 236
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLYS+L KL++E + I+ EAVEIE+EF+ +ALP
Sbjct: 237 SLMPGLTFSNELISRDEGLHTDFACLLYSMLNKKLTKEEIYEIITEAVEIEKEFISEALP 296
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +M QY+EFVADRLL ALG K Y NPF+WM++IS+QGKTNFFEKRVGEY
Sbjct: 297 VELIGMNSNMMKQYLEFVADRLLFALGVPKFYNSKNPFEWMDMISIQGKTNFFEKRVGEY 356
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA+VMSS + VF+++ DF
Sbjct: 357 QKANVMSS----KEDKVFRLNADF 376
>gi|346644876|ref|NP_001231110.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Bos
taurus]
gi|296482361|tpg|DAA24476.1| TPA: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
Length = 389
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 270/329 (82%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L ++E+
Sbjct: 65 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D + T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|348518329|ref|XP_003446684.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Oreochromis niloticus]
Length = 391
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 267/325 (82%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E++FI+
Sbjct: 71 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYFIS 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RFM+EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 131 HVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWALNWI + + T+ ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK +E V I+K AVEIE+EF+ DAL
Sbjct: 251 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +M QYIEFVADRLL LG K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 311 PVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKRVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM++ N F++D DF
Sbjct: 371 YQRMGVMAAPTDN----TFRLDADF 391
>gi|348518321|ref|XP_003446680.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Oreochromis niloticus]
Length = 385
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 267/325 (82%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E++FI+
Sbjct: 65 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYFIS 124
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RFM+EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 125 HVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 184
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWALNWI + + T+ ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 185 EREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWLKK 244
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK +E V I+K AVEIE+EF+ DAL
Sbjct: 245 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTDAL 304
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +M QYIEFVADRLL LG K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 305 PVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKRVGE 364
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM++ N F++D DF
Sbjct: 365 YQRMGVMAAPTDN----TFRLDADF 385
>gi|73979721|ref|XP_540076.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Canis lupus familiaris]
Length = 394
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 70 PSAEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 129
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 130 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 189
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 190 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 249
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 309
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 369
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 370 RVGEYQRMGVMSSPTENS----FTLDADF 394
>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Ailuropoda melanoleuca]
Length = 393
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 268/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 69 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 129 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 189 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVREIIINAVRIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 309 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 369 RVGEYQRMGVMSSPTENS----FTLDADF 393
>gi|2500209|sp|Q60561.1|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
Length = 386
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 267/329 (81%), Gaps = 9/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS + F +D DF
Sbjct: 366 RVGEYQRMGVMS--------NSFTLDADF 386
>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/322 (70%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
+L N DRF +FP+++ E+W+MYK+A ASFW AEE+DLS D+R W +LT E+HFI+HVL
Sbjct: 1 MLQDNEDRFSLFPVKHVEVWKMYKQAVASFWNAEEIDLSTDLRDWGNLTESEQHFISHVL 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFAASDGIVLENL RF+K+VQ+ EARAFYGFQ+A+ENIHSE Y LLLETYIK+S ++
Sbjct: 61 AFFAASDGIVLENLGLRFLKDVQMPEARAFYGFQLAMENIHSETYGLLLETYIKDSVQRK 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
L RA TVP V +KA WAL WI SE FAERLIAFACVEGIFFSGSFCAIFWLKKRGLM
Sbjct: 121 HLMRAIHTVPTVGRKAQWALRWIQSSECFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 180
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCAL 248
GLTFSNELISRDEGLHCDFACLLYS+L++ L ER++ IVK+AVEIE+EFVCDAL CAL
Sbjct: 181 RGLTFSNELISRDEGLHCDFACLLYSMLKHPLEPERLQEIVKDAVEIEKEFVCDALSCAL 240
Query: 249 VGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
VGMN LMS+YIEFVADRLL LG KV+ NPFDWME ISLQGKTNFFE+RVGEYQ+
Sbjct: 241 VGMNADLMSEYIEFVADRLLVQLGVDKVWNTPNPFDWMESISLQGKTNFFERRVGEYQRN 300
Query: 309 SVMSSL-NGNGGNHVFKMDEDF 329
VM+ + + N F + DF
Sbjct: 301 GVMAKQEDASFQNFHFTTEVDF 322
>gi|442754007|gb|JAA69163.1| Putative ribonucleotide reductase beta subunit [Ixodes ricinus]
Length = 376
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF MFPI Y +IW MYKKAEASFWT EEVDL +D+ W+ L +E+HFI+
Sbjct: 56 DEPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLGKDLPHWDGLKPEERHFIS 115
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYSLL++TYIK+
Sbjct: 116 HILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIENVHSEMYSLLIDTYIKDPS 175
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ RLF A ET+PC+ +KADWALNWI + S TF ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 176 ERDRLFNAVETMPCIKRKADWALNWIGNRSATFGERIVAFAAVEGIFFSGSFASIFWLKK 235
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++S L NK S+ERV+ I+ +AV IE+EF+ DAL
Sbjct: 236 RGLMPGLTFSNELISRDEGLHTDFACLMFSHLXNKPSQERVRQIICDAVVIEQEFLTDAL 295
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM +YIEFVADRLL LGC KVY NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 296 PVALIGMNCELMKRYIEFVADRLLVELGCEKVYNSENPFDFMEHISLEGKTNFFEKRVGE 355
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+ N VF +D DF
Sbjct: 356 YQKAGVMA----NKEEQVFTLDADF 376
>gi|348518327|ref|XP_003446683.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Oreochromis niloticus]
Length = 385
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 267/325 (82%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E++FI+
Sbjct: 65 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYFIS 124
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RFM+EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 125 HVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 184
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWALNWI + + T+ ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 185 EREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWLKK 244
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK +E V I+K AVEIE+EF+ DAL
Sbjct: 245 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTDAL 304
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +M QYIEFVADRLL LG K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 305 PVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKRVGE 364
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM++ N F++D DF
Sbjct: 365 YQRMGVMAAPTDN----TFRLDADF 385
>gi|149408710|ref|XP_001506085.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Ornithorhynchus anatinus]
Length = 394
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +EK
Sbjct: 70 PRVEDEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEEK 129
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 130 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 189
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 190 KEPKEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 249
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERVK I+ AV IE+EF+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVKEIIINAVRIEQEFL 309
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLLLELGFSKIFKVENPFDFMENISLEGKTNFFEK 369
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 370 RVGEYQRMGVMSSSTENS----FTLDADF 394
>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
Length = 390
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+H LAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHALAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVMAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K +E+RV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|395828551|ref|XP_003787435.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Otolemur garnettii]
Length = 388
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 64 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 123
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 124 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 183
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 184 KDSQEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 243
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV+IE+EF+
Sbjct: 244 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVKIEQEFL 303
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 304 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFRVENPFDFMENISLEGKTNFFEK 363
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 364 RVGEYQRMGVMSSPTENS----FTLDADF 388
>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
Length = 289
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/288 (79%), Positives = 263/288 (91%)
Query: 42 EEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGF 101
EEVDLSQD+ QW +LT +EKHFI+HVLAFFAASDGIVLENLA RF+K+VQ+ EARAFYGF
Sbjct: 2 EEVDLSQDLYQWVNLTKNEKHFISHVLAFFAASDGIVLENLAGRFLKDVQIPEARAFYGF 61
Query: 102 QIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERL 161
QIAIENIHSEMYSLLLETYI++S EK+RLF A T+PCVA+KA+WA+ WI S +FAER+
Sbjct: 62 QIAIENIHSEMYSLLLETYIRDSKEKARLFNAINTIPCVARKAEWAMRWIQSSGSFAERI 121
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS 221
++FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL++KLS
Sbjct: 122 VSFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLKSKLS 181
Query: 222 EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTN 281
EERVK IV++AV+IEREFVC+AL C LVGMN LMSQYI+F+ADRLL ALG GK+Y V N
Sbjct: 182 EERVKAIVRDAVDIEREFVCEALSCDLVGMNATLMSQYIKFIADRLLVALGHGKMYHVEN 241
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
PFDWM+LISLQGKTNFFE+RVG+YQKAS+MSS++ GNHVFKMDEDF
Sbjct: 242 PFDWMDLISLQGKTNFFERRVGDYQKASIMSSISNAEGNHVFKMDEDF 289
>gi|345498175|ref|XP_003428168.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Nasonia vitripennis]
Length = 372
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/324 (70%), Positives = 262/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQ+P+IW MYKKAEASFWT EEVDLS+D+ W L +E+HFI+H
Sbjct: 51 EPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADWNRLNDNERHFISH 110
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIENIHSEMYSLL++TYI ++ +
Sbjct: 111 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQ 170
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCVAKKA+WALNWI S TFAER+IAFA VEGIFFSGSF AIFWLKKR
Sbjct: 171 RQFLFNAIETLPCVAKKANWALNWISHDSATFAERVIAFAAVEGIFFSGSFAAIFWLKKR 230
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ + K SEERV I+K+AV IE+EF+ DALP
Sbjct: 231 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSEERVISIIKDAVTIEQEFLTDALP 290
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM QYIEFVADRLLG LGC KVY NPFD+ME ISL+GKTNFFEK+VGEY
Sbjct: 291 VEMIGMNCRLMCQYIEFVADRLLGELGCPKVYNSENPFDFMEHISLEGKTNFFEKKVGEY 350
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM G N F ++ DF
Sbjct: 351 QKWGVMQDRTGTENN--FSLEADF 372
>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 261/324 (80%), Gaps = 4/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP+RF +FPI+Y +IW MYK+ +ASFWTAEE+DL QD++ WE LTADEKHFI
Sbjct: 188 DEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLYQDLKDWEKLTADEKHFIK 247
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIV ENLA +F EVQV EAR FYGFQIA+ENIHSE YSLL++TYI + +
Sbjct: 248 YVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIAMENIHSETYSLLIDTYITDEN 307
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ L A + VP + KKA WA+ WI+ +++FAERLIAFA VEGIFFSGSFCAIFW+KKR
Sbjct: 308 EKNYLLHAIDNVPVIQKKAMWAMKWINNNDSFAERLIAFAAVEGIFFSGSFCAIFWIKKR 367
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY + NKLS +RV I+ AVEIE+EF+ +ALP
Sbjct: 368 SLMPGLTFSNELISRDEGLHTDFACLLYKHMINKLSIQRVHEIISSAVEIEKEFISEALP 427
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ ALG K+Y NPF+WM++ISLQGKTNFFE+RVG+Y
Sbjct: 428 VELIGMNSNLMKQYIEFVADRLIFALGAPKIYNSKNPFEWMDMISLQGKTNFFERRVGDY 487
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VMS + VF MD DF
Sbjct: 488 QKAGVMSK----KQDKVFTMDADF 507
>gi|405977462|gb|EKC41913.1| Ribonucleoside-diphosphate reductase small chain [Crassostrea
gigas]
Length = 369
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/324 (69%), Positives = 263/324 (81%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D+ WE+L +E+HFI+H
Sbjct: 48 EPLLEDNPRRFVVFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLGHWEALKDEEQHFISH 107
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF KEVQ +EAR FYGFQIA+ENIHSEMYSLL++TYIK+ +
Sbjct: 108 VLAFFAASDGIVNENLVERFSKEVQATEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKQ 167
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV KKADWA+ WI D F ER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 168 RDYLFNAIETLPCVKKKADWAIKWIGDQEADFGERVVAFAAVEGIFFSGSFAAIFWLKKR 227
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++S L N+ S+ER+ I+ +AV+IE+EF+ +ALP
Sbjct: 228 GIMPGLTFSNELISRDEGLHCDFACLMFSHLLNRPSKERIYEIICDAVKIEQEFLTEALP 287
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYIEFVADRLL L C KVY V NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 288 CNLIGMNCKLMKQYIEFVADRLLLELKCEKVYNVENPFDFMEHISLEGKTNFFEKRVGEY 347
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM+ N H F +D DF
Sbjct: 348 QKMGVMNG--NNSSKHEFTLDADF 369
>gi|338714129|ref|XP_001502384.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Equus
caballus]
Length = 413
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 89 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 148
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 149 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 208
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 209 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 268
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 269 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 328
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN ALM QYIEFVADRLL LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 329 TEALPVRLIGMNCALMKQYIEFVADRLLLELGFNKVFRVENPFDFMENISLEGKTNFFEK 388
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 389 RVGEYQRMGVMSSPTENS----FTLDADF 413
>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
Length = 355
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 3/329 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P+ EP+L N +RF +FPI++ +IWE YKKAEASFWTAEE+DL QD++ W +L E+
Sbjct: 29 PTSTLEPILQENKNRFVLFPIEHHDIWEFYKKAEASFWTAEEIDLGQDLKDWANLNDGER 88
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYI
Sbjct: 89 HFISHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAVENIHSETYSLLIDTYI 148
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
K+ E+ +LF A +T+ CV KKADWAL WI+ + +FAERL+AFA VEGIFFSGSFC+IFW
Sbjct: 149 KDPQERDKLFNAIDTLDCVKKKADWALRWIEQA-SFAERLVAFAAVEGIFFSGSFCSIFW 207
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFV 240
LKKRGLMPGL+FSNELISRDEGLHCDFACLLY+ L+NKL EERV+ I+ +AV IE+EFV
Sbjct: 208 LKKRGLMPGLSFSNELISRDEGLHCDFACLLYANHLQNKLPEERVREIITDAVAIEKEFV 267
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LGC KVY TNPFD+ME+ISLQGKTNFFEK
Sbjct: 268 TDALPVKLIGMNADLMSQYIEFVADRLLLELGCSKVYNATNPFDFMEMISLQGKTNFFEK 327
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKA VM F +D DF
Sbjct: 328 RVGEYQKAGVMKK-EEEKTTERFSLDIDF 355
>gi|395509266|ref|XP_003758922.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Sarcophilus harrisii]
Length = 438
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPI+Y +IW MYKKAEASFWTAEEVDLS+DI+ WE+L +EK+FI+
Sbjct: 118 DEPLLRENPRRFVIFPIEYQDIWHMYKKAEASFWTAEEVDLSKDIQHWEALKPEEKYFIS 177
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+S
Sbjct: 178 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 237
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 238 EREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK 297
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERVK I+ AV IE+EF+ +AL
Sbjct: 298 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVKEIIINAVRIEQEFLTEAL 357
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG K++ NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 358 PVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFRAENPFDFMENISLEGKTNFFEKRVGE 417
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMSS GN F +D DF
Sbjct: 418 YQRMGVMSSSTGNS----FTLDADF 438
>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 402
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 265/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D+ W SL DE+HFI+
Sbjct: 82 DEPLLRDNPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLAHWASLKDDERHFIS 141
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +E+QV+EAR FYGFQIAIENIHSEMYSLL++TYI++
Sbjct: 142 HVLAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAIENIHSEMYSLLIDTYIRDPQ 201
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+P V +KA WALNWI+ T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 202 EREYLFNAIETLPPVKRKAQWALNWINADNATYGERVVAFAAVEGIFFSGSFASIFWLKK 261
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++S L NK S++R+ I+++AV+IE+EF+ DAL
Sbjct: 262 RGLMPGLTFSNELISRDEGLHCDFACLMFSHLTNKPSQQRIIEIIRDAVKIEQEFLTDAL 321
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 322 PVSLIGMNKDLMKQYIEFVADRLLLDLGCNKIYNKENPFDFMENISLEGKTNFFEKRVGE 381
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK VMSS N F ++ DF
Sbjct: 382 YQKMGVMSSPCDNK----FTLEADF 402
>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/338 (66%), Positives = 271/338 (80%), Gaps = 13/338 (3%)
Query: 5 PEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFI 64
P+E LL NP R+ MFPI+Y IWEMYKK EASFWTAEE+DLSQD+R WE+L+ +++HFI
Sbjct: 13 PKEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWENLSDNDRHFI 72
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIVLENL+A+F EVQ EARAFYGFQIA+ENIHSE YSLL++ YIK+
Sbjct: 73 SHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKDP 132
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK ++FRA ETVP V KKA+WAL+WI+ F+ERLIAFACVEGI FSGSFCAI+WLKK
Sbjct: 133 AEKDKIFRAIETVPSVRKKAEWALSWINDDNCFSERLIAFACVEGILFSGSFCAIYWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-NKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEGLH DFACLLY+++ +L +ERV IV+ AV++ER F+ ++
Sbjct: 193 RGLMPGLTFSNELISRDEGLHADFACLLYNMMHYTRLPDERVHEIVRGAVDVERVFISES 252
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM +YIEFVADRLL ALG K+Y TNPFDWM++ISLQGKTNFFEKRVG
Sbjct: 253 LPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNATNPFDWMKMISLQGKTNFFEKRVG 312
Query: 304 EYQKASVM--SSLNGNGGNHV----------FKMDEDF 329
EYQK VM ++ + NG F +DEDF
Sbjct: 313 EYQKGGVMAGTAAHKNGSMDAEERRKSIGADFALDEDF 350
>gi|351701528|gb|EHB04447.1| Ribonucleoside-diphosphate reductase subunit M2 [Heterocephalus
glaber]
Length = 389
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 268/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E+
Sbjct: 65 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDVQHWEALKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPMENS----FTLDADF 389
>gi|346322004|gb|EGX91603.1| ribonucleoside-diphosphate reductase M2 subunit [Cordyceps
militaris CM01]
Length = 413
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/341 (66%), Positives = 268/341 (78%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L ADE
Sbjct: 75 PEQMDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNADE 134
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 135 QYFISHILAFFAASDGIVNENLIERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 194
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A ET+PC+ KKADWAL+WI D TFA+RL+AFA +EGIFFSG+F +I
Sbjct: 195 IKEQAQRTYLFNAIETIPCIRKKADWALHWISDKQSTFAQRLVAFAAIEGIFFSGAFASI 254
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S+E +K I+ +AV IE+EF
Sbjct: 255 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLNNRASKEIIKTIITDAVAIEKEF 314
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 315 LTEALPCALLGMNATLMQQYIEFVADRLLAALGNEKVYKSTNPFDFMENISLGGKTNFFE 374
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKMDEDF 329
KRVGEYQKA VM+S N GG+ F D+DF
Sbjct: 375 KRVGEYQKAGVMASASKKADDGTVEENQAGGD--FSFDDDF 413
>gi|406025255|ref|YP_006705556.1| ribonucleoside-diphosphate reductase subunit M2 [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404432854|emb|CCM10136.1| Ribonucleoside-diphosphate reductase subunit M2 [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 331
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 266/325 (81%), Gaps = 2/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL N +RF +FPI++ +IW YK+AEASFWTAEE+DLSQDI+ WE+L + EKHFIT
Sbjct: 8 DEPLLQENKNRFVLFPIEHQDIWGFYKQAEASFWTAEEIDLSQDIKDWENLISGEKHFIT 67
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL F EVQ +EA+ FYGFQIAIENIHSE YSLL++TY+K+
Sbjct: 68 HVLAFFAASDGIVNENLVQNFANEVQYTEAKFFYGFQIAIENIHSEAYSLLIDTYVKDPK 127
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ RLF A ET+ V KKADWAL WI +F ERLIAFA VEGIFFSGSFCAIFWLKKR
Sbjct: 128 ERHRLFNAIETIEWVGKKADWALRWISKG-SFPERLIAFAAVEGIFFSGSFCAIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY+ +++KL E++V I+ +AV IE EFV DAL
Sbjct: 187 GLMPGLTFSNELISRDEGLHCDFACLLYNAHIKHKLPEQQVAQIIADAVAIESEFVSDAL 246
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYI+FVADRLL LGC K+Y VTNPFD+ME+I+LQGKTNFFEKRVGE
Sbjct: 247 PVKLIGMNATLMTQYIQFVADRLLLELGCKKIYHVTNPFDFMEMIALQGKTNFFEKRVGE 306
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VM+S++ + FK+DE F
Sbjct: 307 YQKSGVMNSISEDKDKARFKLDEPF 331
>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
Length = 355
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 261/324 (80%), Gaps = 4/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP+RF +FPI+Y +IW MYK+ +ASFWTAEE+DL QD++ WE LTADEKHFI
Sbjct: 36 DEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLYQDLKDWEKLTADEKHFIK 95
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIV ENLA +F EVQV EAR FYGFQIA+ENIHSE YSLL++TYI + +
Sbjct: 96 YVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIAMENIHSETYSLLIDTYITDEN 155
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ L A + VP + KKA WA+ WI+ +++FAERLIAFA VEGIFFSGSFCAIFW+KKR
Sbjct: 156 EKNYLLHAIDNVPVIQKKAMWAMKWINENDSFAERLIAFAAVEGIFFSGSFCAIFWIKKR 215
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY L NK+S +R+ I+ AVEIE+EF+ +ALP
Sbjct: 216 SLMPGLTFSNELISRDEGLHTDFACLLYKHLVNKMSNQRIHEIISSAVEIEKEFISEALP 275
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ ALG K+Y NPF+WM++ISLQGKTNFFE+RVG+Y
Sbjct: 276 VELIGMNSNLMKQYIEFVADRLIFALGAPKIYNSKNPFEWMDMISLQGKTNFFERRVGDY 335
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VMS + VF MD DF
Sbjct: 336 QKAGVMSK----KQDKVFTMDADF 355
>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 267/329 (81%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQYP+IW+MYKKAEASFWT EEVDLS+D++ WE+L E+
Sbjct: 78 PSI--EPLLRDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWETLKPSER 135
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 136 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 195
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
++S E+ LF A ET+PCV +KADWALNWI + F ER++AFA VEGIFFSGSF AIF
Sbjct: 196 RDSKEREFLFNAIETLPCVKRKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFAAIF 255
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K S+ERV I+++AV IE+EF+
Sbjct: 256 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKYLVQKPSKERVTEIIRDAVLIEQEFL 315
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP ++GMN LMSQYIEFVADRLL LGC K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 316 TKALPVDMLGMNCDLMSQYIEFVADRLLLELGCEKIYHTKNPFSFMEFISLEGKTNFFEK 375
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 376 KVGEYQKWGVMA----NRLDNVFTLDADF 400
>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
Length = 333
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT +EKHFI H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S ++ ERL+AFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLVAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|355717368|gb|AES05910.1| ribonucleotide reductase M2 polypeptide [Mustela putorius furo]
Length = 391
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/328 (68%), Positives = 268/328 (81%), Gaps = 5/328 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P++ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 68 PNVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 127
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 128 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 187
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 188 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 247
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+
Sbjct: 248 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVREIIINAVRIEQEFL 307
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG GKV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 308 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 367
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDED 328
RVGEYQ+ VMSS N F +D D
Sbjct: 368 RVGEYQRMGVMSSPTENS----FTLDAD 391
>gi|344280318|ref|XP_003411931.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Loxodonta africana]
Length = 386
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/328 (68%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E++
Sbjct: 63 SVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEERY 122
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIINAVRIEQEFLT 302
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 EALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFKVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMSS N F +D DF
Sbjct: 363 VGEYQRMGVMSSPTENS----FTLDADF 386
>gi|255037048|ref|YP_003087669.1| ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
Length = 331
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 266/325 (81%), Gaps = 2/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLLT +P RF +FPI++ +IWEMYK+ EASFWTAEE+DLSQD++ WE+L+ E+HFI+
Sbjct: 8 QEPLLTEDPLRFVLFPIKHSDIWEMYKRHEASFWTAEEIDLSQDMKDWENLSDGERHFIS 67
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK+S
Sbjct: 68 HVLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKDSA 127
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL RA ET+PCV KKADWAL WID S FAER+IAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 128 EKDRLLRAIETIPCVQKKADWALKWID-SPVFAERIIAFAAVEGIFFSGSFCSIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGL+FSNELISRDEGLHC+FACLLY+ + N+L +ERV I+ +AVEIE+EFV +AL
Sbjct: 187 GLMPGLSFSNELISRDEGLHCEFACLLYTKHILNQLPQERVIEIMLDAVEIEKEFVSEAL 246
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QYIE++AD L LGC K +G NPFD+MELISL GKTNFFEKRVGE
Sbjct: 247 PVSLIGMNADLMKQYIEYIADFWLERLGCPKQFGSANPFDFMELISLPGKTNFFEKRVGE 306
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS + H D DF
Sbjct: 307 YQKAGVMSGVKDKESAHKISFDSDF 331
>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
sapiens]
gi|400979|sp|P31350.1|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
Length = 389
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|402890069|ref|XP_003908316.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Papio
anubis]
Length = 389
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|348566413|ref|XP_003468996.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cavia porcellus]
Length = 388
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 269/329 (81%), Gaps = 6/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 65 PSVEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KK+DWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDSREREFLFNAIETMPCV-KKSDWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 243
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L ++ SE+RVK I+ AV IE+EF+
Sbjct: 244 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLMHRPSEQRVKEIIVNAVRIEQEFL 303
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG GKV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 304 TEALPVKLIGMNCELMKQYIEFVADRLMLELGFGKVFQVENPFDFMENISLEGKTNFFEK 363
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 364 RVGEYQRMGVMSSPTENS----FTLDADF 388
>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
Length = 376
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF MFPI Y +IW MYKKAEASFWT EEVDL +D+ W+ L +E+HFI+
Sbjct: 56 DEPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLGKDLPHWDGLKPEERHFIS 115
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYSLL++TYIK+
Sbjct: 116 HILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIENVHSEMYSLLIDTYIKDPS 175
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ RLF A ET+PC+ +KADWALNWI S TF ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 176 ERDRLFNAVETMPCIKRKADWALNWISNRSATFGERIVAFAAVEGIFFSGSFASIFWLKK 235
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++S L NK S+ RV+ I+ +AV IE+EF+ DAL
Sbjct: 236 RGLMPGLTFSNELISRDEGLHTDFACLMFSHLVNKPSQARVRQIICDAVVIEQEFLTDAL 295
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM +YIEFVADRLL LGC KVY NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 296 PVALIGMNCELMKRYIEFVADRLLVELGCEKVYNSENPFDFMEHISLEGKTNFFEKRVGE 355
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+ N VF +D DF
Sbjct: 356 YQKAGVMA----NKEEQVFTLDADF 376
>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 3 [Anolis carolinensis]
Length = 391
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 263/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P +EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL DEK
Sbjct: 67 PRRTDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPDEK 126
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+H+LAFFAASDGIV ENL RF +E+QV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 127 YFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 186
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV +KADWA+ WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 187 KDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSGSFASIF 246
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 247 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVRIEQEFL 306
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEK
Sbjct: 307 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYKAENPFDFMENISLEGKTNFFEK 366
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N F +D DF
Sbjct: 367 RVGEYQRMGVMSKAVDNS----FTLDADF 391
>gi|325559284|gb|ADZ30659.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT +EKHFI H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQV+EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERL+AFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLVAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|363732458|ref|XP_001231545.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Gallus gallus]
Length = 384
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL +EK+FI+
Sbjct: 64 EEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEKYFIS 123
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+S
Sbjct: 124 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 183
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 184 EREFLFNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK I+ AV IE+EF+ +AL
Sbjct: 244 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVKEIIMNAVLIEQEFLTEAL 303
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 304 PVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYKVENPFDFMENISLEGKTNFFEKRVGE 363
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMS N F +D +F
Sbjct: 364 YQRMGVMSKPTDNS----FTLDAEF 384
>gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Nomascus leucogenys]
Length = 434
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 110 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 169
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 170 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 229
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 230 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 289
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 290 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 349
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG GKV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 350 TEALPVKLIGMNCILMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 409
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 410 RVGEYQRMGVMSSPTENS----FTLDADF 434
>gi|443728153|gb|ELU14627.1| hypothetical protein CAPTEDRAFT_162025 [Capitella teleta]
Length = 321
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/324 (69%), Positives = 268/324 (82%), Gaps = 6/324 (1%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
+L NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D+ WE L DE+HFI+HVL
Sbjct: 1 MLRDNPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDVSHWEQLKPDERHFISHVL 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFAASDGIV ENL RF KEVQV+EAR FYGFQIAIENIHSEMYSLL++TYIK+ EK
Sbjct: 61 AFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAIENIHSEMYSLLIDTYIKDMTEKE 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
LF A ET+PCV +KADWAL WI+ S++ +AER++AFA VEGIFFSGSF AIFWLKKRG+
Sbjct: 121 YLFNAIETMPCVKEKADWALRWINDSQSSYAERVVAFAAVEGIFFSGSFAAIFWLKKRGV 180
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLHCDFACL++S L +K S+E++ I+++AV IE++F+ +ALPC
Sbjct: 181 MPGLTFSNELISRDEGLHCDFACLMFSHLVHKPSQEKIYIIIRDAVRIEQKFLTEALPCN 240
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN LM QYIEFVADRLL LGC K++ V NPFD+M+ ISL+GKTNFFEKRVGEYQK
Sbjct: 241 LIGMNCDLMKQYIEFVADRLLVELGCEKIWNVENPFDFMDNISLEGKTNFFEKRVGEYQK 300
Query: 308 ASVMSSLNG--NGGNHVFKMDEDF 329
M LNG + H F +DEDF
Sbjct: 301 ---MGLLNGASSSNAHQFTVDEDF 321
>gi|75076796|sp|Q4R7Q7.1|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
Length = 389
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV +E+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|126303832|ref|XP_001381111.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Monodelphis domestica]
Length = 493
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS +EPLL NP RF +FPI+Y +IW MYKKAEASFWTAEEVDLS+DI+ WE+L ++EK
Sbjct: 169 PSKEDEPLLRENPRRFVIFPIEYHDIWHMYKKAEASFWTAEEVDLSKDIQHWETLKSEEK 228
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 229 YFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 288
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 289 KDPKEREFLFNAIETLPCVKKKADWALRWIGDNEATYGERVVAFAAVEGIFFSGSFASIF 348
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEE+VK I+ AV IE+EF+
Sbjct: 349 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEEKVKEIIINAVRIEQEFL 408
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 409 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFRVENPFDFMENISLEGKTNFFEK 468
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 469 RVGEYQRMGVMSSPTENS----FTLDADF 493
>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Anolis carolinensis]
Length = 414
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI YP+IW+MYKKA+ASFWTAEEVDLS+D W L ++EK+FI+
Sbjct: 94 EEPLLRKNPRRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDFPHWNKLKSEEKYFIS 153
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYIK+ +
Sbjct: 154 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 213
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWAL WI D TF ER++AFA VEGIFFSG+F AIFWLKK
Sbjct: 214 ERDFLFNAIETMPCVKKKADWALRWIRDRKATFGERVVAFASVEGIFFSGAFAAIFWLKK 273
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 274 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 333
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 334 PVGLIGMNCTLMKQYIEFVADRLLLELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 393
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N N VF +D DF
Sbjct: 394 YQRFAVMAETNDN----VFTLDADF 414
>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Anolis carolinensis]
Length = 390
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL DEK+FI+
Sbjct: 70 DEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPDEKYFIS 129
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +E+QV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 130 HILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 189
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV +KADWA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 190 EREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSGSFASIFWLKK 249
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+ +AL
Sbjct: 250 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVRIEQEFLTEAL 309
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 310 PVNLIGMNCTLMKQYIEFVADRLILELGFNKIYKAENPFDFMENISLEGKTNFFEKRVGE 369
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMS N F +D DF
Sbjct: 370 YQRMGVMSKAVDNS----FTLDADF 390
>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
Length = 335
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/335 (65%), Positives = 267/335 (79%), Gaps = 6/335 (1%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M I EEP+L N DRF +FPI+YP+IW MYK+AEASFWTAEE+DL+ D+ W S L +
Sbjct: 1 MNQIIEEPILKENKDRFVLFPIKYPDIWSMYKQAEASFWTAEEIDLAPDLNDWSSKLNDN 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI++VLAFFAASDGIV ENLA RFM EVQ+ EAR FYGFQIAIENIHSE YSLL++T
Sbjct: 61 ERHFISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++++KS+LF A +T+PC+ KKADWAL WI+ S++FAERL+AFA VEGIFFSGSFC+I
Sbjct: 121 YIKDNEQKSKLFNAIDTIPCIKKKADWALKWINNSDSFAERLVAFAAVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHC+FACLLY+ L NKL + ++ I+++AV E+EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCNFACLLYTKLINKLESKTLEAIIRDAVVCEKEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+CD+LP L+GMN MSQYIEF ADRLL +LG K+Y +NPFDWME+ISLQ KTNFFE
Sbjct: 241 ICDSLPVDLIGMNSRSMSQYIEFCADRLLVSLGYKKIYNASNPFDWMEMISLQRKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGN-----GGNHVFKMDEDF 329
+V EY K V + N + +DE+F
Sbjct: 301 GKVAEYAKTGVAIQKSNNQQTSSTQSRTLVLDEEF 335
>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
Length = 319
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
Length = 323
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N DRF + PI YP IW+MYKK EASFWTAEE+DLS D++ W +L E+HFI+H
Sbjct: 6 EVLLRENKDRFVILPINYPAIWDMYKKHEASFWTAEEIDLSGDLKDWANLNDGERHFISH 65
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA FM EVQ+ EAR+FYGFQIA+ENIHSE Y+LL++TY+K+ E
Sbjct: 66 VLAFFAASDGIVNENLAINFMSEVQLPEARSFYGFQIAMENIHSETYALLIDTYVKDPVE 125
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K RLF A ETV CV KKA+WAL WI+ +FAERL+AFA VEGIFFSGSFCAIFWLKKRG
Sbjct: 126 KDRLFHAIETVECVKKKAEWALRWIENG-SFAERLVAFAAVEGIFFSGSFCAIFWLKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHC+FACLLYS+L KL +ERV+ I+ +AVEIE+EF+ DALP
Sbjct: 185 LMPGLTFSNELISRDEGLHCEFACLLYSMLEAKLPKERVQEIIIDAVEIEKEFITDALPV 244
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEFVADR L LG K Y TNPFD+MELISLQGKTNFFEKRVG+YQ
Sbjct: 245 KLIGMNADLMKQYIEFVADRWLVELGNSKYYNATNPFDFMELISLQGKTNFFEKRVGDYQ 304
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ V G G F +DEDF
Sbjct: 305 KSGV----TGEKGKASFSLDEDF 323
>gi|392397812|ref|YP_006434413.1| ribonucleotide reductase subunit beta [Flexibacter litoralis DSM
6794]
gi|390528890|gb|AFM04620.1| ribonucleotide reductase, beta subunit [Flexibacter litoralis DSM
6794]
Length = 331
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/335 (66%), Positives = 268/335 (80%), Gaps = 10/335 (2%)
Query: 1 MPSIP-----EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES 55
M +IP EPLL NP+RF +FPI++ +IW+MYK+AEASFWTAEE+DLS D+R WE+
Sbjct: 1 MSNIPSKELLHEPLLAENPNRFVLFPIKHDDIWQMYKQAEASFWTAEEIDLSNDMRDWEA 60
Query: 56 LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSL 115
++ +E+HF+ HVLAFFAASDGIV ENL FMKEVQ+ EAR FYGFQ+ ENIH+E YSL
Sbjct: 61 MSENERHFVKHVLAFFAASDGIVNENLVVNFMKEVQLPEARCFYGFQVMAENIHAETYSL 120
Query: 116 LLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGS 175
L++ YIK + EK LF A + + CVAKK +WAL WI+ S+ FAERL+AFA VEGIFFSGS
Sbjct: 121 LIDGYIKGTKEKDYLFNALDNLECVAKKGNWALKWIE-SDNFAERLVAFAAVEGIFFSGS 179
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVE 234
FC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY + + NKL +ER+ I+ +AV+
Sbjct: 180 FCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYNNYIENKLPKERIIEIITDAVK 239
Query: 235 IEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGK 294
IE+EFV DA+P +L+GMN LMSQYIEFVADRLL L C K Y TNPF +ME+ISLQGK
Sbjct: 240 IEQEFVTDAIPVSLIGMNADLMSQYIEFVADRLLNELNCEKQYNSTNPFPFMEMISLQGK 299
Query: 295 TNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
TNFFEKRVGEYQKA VM N N + F +DEDF
Sbjct: 300 TNFFEKRVGEYQKAGVM---NNNDDSPKFSLDEDF 331
>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Anolis carolinensis]
Length = 394
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL DEK+FI+
Sbjct: 74 DEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPDEKYFIS 133
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +E+QV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 134 HILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 193
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV +KADWA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 EREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+ +AL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVRIEQEFLTEAL 313
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 314 PVNLIGMNCTLMKQYIEFVADRLILELGFNKIYKAENPFDFMENISLEGKTNFFEKRVGE 373
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMS N F +D DF
Sbjct: 374 YQRMGVMSKAVDNS----FTLDADF 394
>gi|325559071|gb|ADZ30447.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT +EKHFI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|431911830|gb|ELK13974.1| Ribonucleoside-diphosphate reductase subunit M2 [Pteropus alecto]
Length = 364
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/328 (68%), Positives = 265/328 (80%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E+H
Sbjct: 41 SVQDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEERH 100
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 101 FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK 160
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFW
Sbjct: 161 DSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFW 220
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 221 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFRHLLHKPSEQRVKEIIINAVRIEQEFLT 280
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRL+ LG KV+ NPFD+ME ISL+GKTNFFEKR
Sbjct: 281 EALPVKLIGMNCTLMEQYIEFVADRLMLELGFNKVFRAENPFDFMENISLEGKTNFFEKR 340
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQK VMS N F +D DF
Sbjct: 341 VGEYQKMGVMSGPTENS----FTLDADF 364
>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Pongo
abelii]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 125 PDVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
sapiens]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|410250512|gb|JAA13223.1| ribonucleotide reductase M2 [Pan troglodytes]
gi|410250514|gb|JAA13224.1| ribonucleotide reductase M2 [Pan troglodytes]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|397513395|ref|XP_003827001.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Pan
paniscus]
Length = 449
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
gi|325558644|gb|ADZ30022.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAF VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFTAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|56404698|sp|O57175.1|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
gi|325514058|gb|ADZ24052.1| ribonucleotide reductase small subunit protein [Cowpox virus]
gi|325557783|gb|ADZ29165.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|325557997|gb|ADZ29378.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSTGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|444731691|gb|ELW72040.1| Ribonucleoside-diphosphate reductase subunit M2 [Tupaia chinensis]
Length = 357
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 33 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 92
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 93 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 152
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 153 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 212
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+
Sbjct: 213 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVQEIIVNAVRIEQEFL 272
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 273 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 332
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 333 RVGEYQRMGVMSSPTENS----FTLDADF 357
>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
Length = 390
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQYP+IW+MYKKAEASFWT EEVDLS+D++ W+SL E+
Sbjct: 68 PSI--EPLLMDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWDSLKPSER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
++ E+ LF A ET+PCV +KADWA+NWI + + ER++AFA VEGIFFSGSF AIF
Sbjct: 186 RDPKERDFLFNAIETLPCVKRKADWAMNWISSKKANYGERIVAFAAVEGIFFSGSFAAIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K S +RV I+++AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKYLVQKPSRKRVTDIIRDAVMIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP ++GMN LMSQYIEFVADRLL LGC KVY NPF +ME ISL+GKTNFFEK
Sbjct: 306 TKALPVDMLGMNCELMSQYIEFVADRLLVELGCEKVYNTKNPFSFMEFISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 366 KVGEYQKWGVMA----NRLDNVFTLDADF 390
>gi|118087248|ref|XP_418364.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Gallus gallus]
Length = 353
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQ+P+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 33 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 92
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL ARF +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIK+ +
Sbjct: 93 HVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 152
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV KKADWAL WI+ E TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 153 KRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L N+ SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 272
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 273 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 332
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 333 YQRFAVMAETMDN----VFTLDADF 353
>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|132629|sp|P11158.1|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
virus]
gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
Length = 319
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/325 (70%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF + PIQYPEIW+MYKKAEASFWTAEEVDLS+D + L DE+ F++
Sbjct: 21 DEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDDERMFVS 80
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL F +EVQ+ EAR FYGFQIAIENIHSEMYSLL+E+ IK+
Sbjct: 81 HVLAFFAASDGIVNENLVECFSQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDKA 140
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF A ET+PCV KKA WALNWI+ +F ER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 141 EKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLKK 200
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL+Y L NK EE V+GI+K+AV IE+EF+ AL
Sbjct: 201 RGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSAL 260
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ALM QYIEFVADRLL AL C KVY V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 261 PVKLIGMNCALMRQYIEFVADRLLVALNCQKVYNVENPFDFMENISLEGKTNFFEKRVGE 320
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VMS + +H F ++E+F
Sbjct: 321 YQKSGVMSEKD----SHKFSLEEEF 341
>gi|410928203|ref|XP_003977490.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Takifugu rubripes]
Length = 388
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 262/324 (80%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WESL +E++FI+H
Sbjct: 69 EPLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKDEERYFISH 128
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E
Sbjct: 129 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPSE 188
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV +KADWALNWI + S + ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 189 REYLFNAIETLPCVKRKADWALNWIGNKSAAYGERVVAFAAVEGIFFSGSFASIFWLKKR 248
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L NK S + V I+K AVEIE+EF+ +ALP
Sbjct: 249 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSAQTVSDIIKNAVEIEQEFLTEALP 308
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 309 VKLIGMNCGLMKQYIEFVADRLMLELGFTKIYRAENPFDFMENISLEGKTNFFEKRVGEY 368
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q+ VMS N F++D DF
Sbjct: 369 QRMGVMSGATDN----TFRLDADF 388
>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
gi|373447703|gb|AEY73087.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373447945|gb|AEY73328.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|439965889|gb|AGB75763.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|410928205|ref|XP_003977491.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Takifugu rubripes]
Length = 386
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 262/324 (80%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WESL +E++FI+H
Sbjct: 67 EPLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKDEERYFISH 126
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E
Sbjct: 127 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPSE 186
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV +KADWALNWI + S + ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 187 REYLFNAIETLPCVKRKADWALNWIGNKSAAYGERVVAFAAVEGIFFSGSFASIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L NK S + V I+K AVEIE+EF+ +ALP
Sbjct: 247 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSAQTVSDIIKNAVEIEQEFLTEALP 306
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 307 VKLIGMNCGLMKQYIEFVADRLMLELGFTKIYRAENPFDFMENISLEGKTNFFEKRVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q+ VMS N F++D DF
Sbjct: 367 QRMGVMSGATDN----TFRLDADF 386
>gi|373447466|gb|AEY72851.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448186|gb|AEY73568.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448417|gb|AEY73798.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448658|gb|AEY74038.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448899|gb|AEY74278.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373449129|gb|AEY74507.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373449370|gb|AEY74747.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|397573555|gb|EJK48757.1| hypothetical protein THAOC_32419 [Thalassiosira oceanica]
Length = 480
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/327 (68%), Positives = 258/327 (78%), Gaps = 7/327 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPE--IWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+EPLL NP+RF +FPIQ E IW+MYKKAEASFWTAEE+DL++D++ W+ LT +E+HF
Sbjct: 158 DEPLLMDNPNRFVLFPIQDNEVRIWQMYKKAEASFWTAEEIDLAEDLKDWDGLTNNERHF 217
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
++H+LAFFAASDGIV ENL F EVQ +EAR FYGFQIA+ENIHSE YSLL++TYIK+
Sbjct: 218 VSHILAFFAASDGIVNENLCGNFATEVQSAEARCFYGFQIAVENIHSETYSLLIDTYIKD 277
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
+K L A ETVPCV KKA+WAL W D +FAER IAFA VEGIFFSGSFCAIFWL
Sbjct: 278 QADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCIAFAAVEGIFFSGSFCAIFWL 337
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGL FSNELISRDEGLHCDFACLLYS L NK+ E R+ IV AVEIE+EFV D
Sbjct: 338 KKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPESRIVEIVTHAVEIEKEFVVD 397
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEF ADRLL ALGC K+Y +NPF+WME+ISLQGKTNFFEKRV
Sbjct: 398 ALPVELIGMNSGLMCQYIEFCADRLLHALGCSKIYKASNPFEWMEMISLQGKTNFFEKRV 457
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEY K+ V N VF +D DF
Sbjct: 458 GEYSKSGV----GVNKDEQVFSLDCDF 480
>gi|449284077|gb|EMC90658.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial [Columba
livia]
Length = 333
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 13 EEPLLRKNPRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 72
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL ARF +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIK+ +
Sbjct: 73 HILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 132
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV KKADWAL WI+ E TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 133 KRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L N+ SEERV I+ AVEIE+EF+ +AL
Sbjct: 193 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVHEIIVNAVEIEQEFLTEAL 252
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 253 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 312
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 313 YQRFAVMAETMDN----VFTLDADF 333
>gi|441498220|ref|ZP_20980420.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Fulvivirga imtechensis AK7]
gi|441438008|gb|ELR71352.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Fulvivirga imtechensis AK7]
Length = 331
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/324 (68%), Positives = 266/324 (82%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N +RF +FPI++ +IW+ YKKAEASFWTAEE+DLSQD++ W +++ E+HFI+H
Sbjct: 10 EPILKENKNRFVLFPIKHDDIWQFYKKAEASFWTAEEIDLSQDLKDWNNMSDGERHFISH 69
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIAIENIHSE YSLL++TY+K+ +E
Sbjct: 70 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAIENIHSETYSLLIDTYVKDPNE 129
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF A ET+ CV KKADWAL WID +F ERL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 KDKLFNAIETMDCVKKKADWALRWIDEG-SFQERLVAFAAVEGIFFSGSFCSIFWLKKRG 188
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGL+FSNELISRDEGLHCDFACLLY + + NKL +E + I+K+AV IE+EFV DALP
Sbjct: 189 LMPGLSFSNELISRDEGLHCDFACLLYNNHVINKLPQETIISIIKDAVSIEKEFVTDALP 248
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYIEFVADRLL L KVYG TNPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 249 VSLIGMNADLMCQYIEFVADRLLNELIGEKVYGATNPFDFMEMISLQGKTNFFEKRVGDY 308
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM S N + F +DEDF
Sbjct: 309 QKAGVMKS-NKEDDSPKFSLDEDF 331
>gi|410034790|ref|XP_003949799.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 [Pan troglodytes]
Length = 456
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 132 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 191
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 192 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 251
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 252 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 311
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 312 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 371
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 372 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 431
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 432 RVGEYQRMGVMSSPTENS----FTLDADF 456
>gi|383866746|gb|AFH54589.1| ribonucleotide reductase small subunit [Ectromelia virus]
Length = 319
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQV+EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|343470797|emb|CCD16606.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343476067|emb|CCD12726.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 341
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/327 (66%), Positives = 263/327 (80%), Gaps = 4/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ EEPLL NP R+ +FPI+Y +IW+MYK+AE+S WT EE+DL D+ WE L E+HF
Sbjct: 18 VAEEPLLKENPGRYVLFPIKYHDIWKMYKEAESSIWTVEEIDLGNDMVDWEKLDNGERHF 77
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I HVLAFFAASDGIVLENLA RFM EVQV EAR FYGFQIAIEN+HSE YS+L++TYI +
Sbjct: 78 IKHVLAFFAASDGIVLENLAQRFMSEVQVPEARCFYGFQIAIENVHSETYSVLIDTYITD 137
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++EK+ L A T+PC+ +KADWA+ WI +FA RL+AFA VEGIFFSGSFCA+FWLK
Sbjct: 138 TEEKNNLLNAISTIPCIKRKADWAIRWIGCDSSFATRLVAFAAVEGIFFSGSFCALFWLK 197
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KRGLMPGLTFSNELISRDEGLH DFACLLY +++KLS E + I+ +AV IEREF+CD
Sbjct: 198 KRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIKHKLSREEILSIICDAVSIEREFICD 257
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM+QYIEFVADRL+ ALG + Y V NPFD+ME+ISLQGKTNFFEK+V
Sbjct: 258 ALPVRLIGMNSDLMAQYIEFVADRLIVALGYERHYNVKNPFDFMEMISLQGKTNFFEKKV 317
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEYQKA VMSS +G + VF ++ DF
Sbjct: 318 GEYQKAGVMSS---DGSSKVFDLNADF 341
>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
Length = 319
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|400597058|gb|EJP64802.1| ribonucleotide reductase [Beauveria bassiana ARSEF 2860]
Length = 416
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/342 (66%), Positives = 267/342 (78%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + LTADE
Sbjct: 77 PEEVDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTADE 136
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 137 QYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 196
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A +T+PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 197 IKEQAQRTYLFNAIDTIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGAFASI 256
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S+E +K I+ +AV IE+EF
Sbjct: 257 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLNNRASKEIIKTIITDAVTIEKEF 316
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPC L+GMN LM QYIEFVADRLL ALG K+Y TNPFD+ME ISL GKTNFFE
Sbjct: 317 LTEALPCGLLGMNATLMQQYIEFVADRLLVALGNEKIYKSTNPFDFMENISLGGKTNFFE 376
Query: 300 KRVGEYQKASVMSSL------------NGNGGNHVFKMDEDF 329
KRVGEYQKA VM+S N GG+ F D+DF
Sbjct: 377 KRVGEYQKAGVMASASKKADDGTSPDENKAGGD--FSFDDDF 416
>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
[Paracoccidioides brasiliensis Pb03]
Length = 413
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/338 (67%), Positives = 266/338 (78%), Gaps = 16/338 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI
Sbjct: 78 DEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI+ E TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 198 KQRTYLFDAIDTIPCIRKKADWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLK 257
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR++ S E V+ I+ EAV IE+EF+ DA
Sbjct: 258 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDA 317
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 318 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNSTNPFDFMDNISLTGKTNFFEKRVG 377
Query: 304 EYQKASVMSSL------------NGNGGNHVFKMDEDF 329
+YQKA VM+S N NGG F DEDF
Sbjct: 378 DYQKAGVMASTKKEAASDDAEQQNENGG--AFTFDEDF 413
>gi|132628|sp|P20493.1|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
Length = 319
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
Length = 319
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQV+EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEF+ADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFIADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF + PIQYPEIW+MYKKAEASFWTAEEVDLS+D + L DE+ F++
Sbjct: 64 DEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDDERMFVS 123
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL F +EVQ+ EAR FYGFQIAIENIHSEMYSLL+E+ IK+
Sbjct: 124 HVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDKA 183
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF A ET+PCV KKA WALNWI+ +F ER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 184 EKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL+Y L NK EE V+GI+K+AV IE+EF+ AL
Sbjct: 244 RGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSAL 303
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ALM QYIEFVADRLL AL C KVY V NPFD+ME ISL+GKTNF+EKRVGE
Sbjct: 304 PVKLIGMNCALMRQYIEFVADRLLVALNCQKVYNVENPFDFMENISLEGKTNFYEKRVGE 363
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VMS + H F + ++F
Sbjct: 364 YQKSGVMSEKDS----HKFSLKDEF 384
>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
Length = 319
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKR
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRD 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE VK I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVKSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|395217260|ref|ZP_10401555.1| ribonucleoside-diphosphate reductase [Pontibacter sp. BAB1700]
gi|394455057|gb|EJF09607.1| ribonucleoside-diphosphate reductase [Pontibacter sp. BAB1700]
Length = 295
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/300 (75%), Positives = 251/300 (83%), Gaps = 5/300 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEE+DLSQD + WE+L E+HFI+HVLAFFAASDGIV ENLA FM+E
Sbjct: 1 MYKKAEASFWTAEEIDLSQDQKDWENLNDGERHFISHVLAFFAASDGIVNENLAINFMQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQ+ EAR FYGFQI +ENIHSE YSLL++TYIK EK LF A ETVPCV KK +WAL
Sbjct: 61 VQLPEARCFYGFQIMMENIHSETYSLLIDTYIKKQSEKDYLFNALETVPCVKKKGEWALK 120
Query: 150 WIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
WI+ SE F ERLIAFA VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIN-SEKFVERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 179
Query: 210 CLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLG 269
CLLYS+L NKL E RV I+++AVEIE+EFV DALP L+GMN LMSQYIEFVADRLL
Sbjct: 180 CLLYSMLNNKLPESRVHEIIRDAVEIEQEFVTDALPVDLIGMNAKLMSQYIEFVADRLLV 239
Query: 270 ALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+LGC K+Y TNPFD+ME+ISLQGKTNFFEKRVGEYQKA VM G+ +VF +DEDF
Sbjct: 240 SLGCSKIYNATNPFDFMEMISLQGKTNFFEKRVGEYQKAGVM----GDKDKNVFSLDEDF 295
>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
Length = 387
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D + W+SL +E++FI+
Sbjct: 67 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDTQHWDSLKDEERYFIS 126
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 127 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 186
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV +KADWALNWI + + F ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 187 ERDYLFNAIETLPCVKRKADWALNWIGNKNAGFGERVVAFAAVEGIFFSGSFAAIFWLKK 246
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L +K S+E V +++ AVEIE+EF+ AL
Sbjct: 247 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSKETVTKLIRNAVEIEQEFLTKAL 306
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRL+ LG K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 307 PVKLIGMNCDLMTQYIEFVADRLMLELGFDKIYRVENPFDFMENISLEGKTNFFEKRVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMS N F++D DF
Sbjct: 367 YQRMGVMSGTTDNA----FRLDADF 387
>gi|325558427|gb|ADZ29806.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 16 EQILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 261/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NPDR+ +FPI+Y +IW+ YK++E+S WT EE+DLS D+ WE + EK FI
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKESESSIWTVEEIDLSSDLADWEKMNEGEKFFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIAIEN+HSE YS+LL+TYI +++
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYITDTE 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK R+ A T+PC+ KKA+WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + NKL +ER++ I+ AV+IEREF+CDA+
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPKERIREIICSAVDIEREFICDAI 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLVALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit R2
Length = 332
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 8 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 67
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 68 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 127
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 128 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 187
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRG MPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 188 WLKKRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 247
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 248 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 307
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 308 RVGEYQRMGVMSSPTENS----FTLDADF 332
>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE LL NP RF +FP++YP+IWEMYKKA ASFWTAEEVDL DI QW +LT +E+HFI
Sbjct: 18 EEALLKENPHRFVLFPLEYPKIWEMYKKAMASFWTAEEVDLHTDITQWTTLTPNEQHFIK 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL +FM EVQ+ EAR FYGFQIAIENIH+EMYS L+ET IK+
Sbjct: 78 SVLAFFAASDGIVNENLCQQFMAEVQIPEARCFYGFQIAIENIHAEMYSTLIETLIKDQR 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ RLF A +TVP V KKA WA+ WI+ FAERL+AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 ERHRLFNAIDTVPSVQKKARWAMKWINNENLFAERLLAFACVEGIFFSGSFCSIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLR-NKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGL FSNELISRDEGLH DFACLLYS L+ KL ++ V +V EAVEIE+EF+C++L
Sbjct: 198 GLMPGLAFSNELISRDEGLHTDFACLLYSTLKFTKLPQQVVHSLVSEAVEIEKEFICESL 257
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIE VADRLL +LG K+Y NPFDWM +IS+ GKTNFFEK+VGE
Sbjct: 258 PVDLIGMNSRLMQQYIEMVADRLLVSLGYDKIYNSPNPFDWMNIISVSGKTNFFEKKVGE 317
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
Y KA++MSS + VF++D+DF
Sbjct: 318 YAKANIMSS----KKDKVFRLDDDF 338
>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Taeniopygia guttata]
Length = 390
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL +EK
Sbjct: 66 PGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEK 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWA+ WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREFLFNAIETLPCVKKKADWAMCWIGDKKATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERVK I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIHKPSEERVKEIIMNAVLIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYKAENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N F +D +F
Sbjct: 366 RVGEYQRMGVMSKPTENS----FTLDAEF 390
>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
gi|373447227|gb|AEY72613.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRYIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|340500115|gb|EGR27014.1| ribonucleoside-diphosphate reductase small chain, putative
[Ichthyophthirius multifiliis]
Length = 366
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/323 (66%), Positives = 265/323 (82%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF MFPI+Y +IWEMYKK ASFWTA+E+DL QD++ WE LT E+HFI +
Sbjct: 48 EPILQENPNRFVMFPIKYNKIWEMYKKELASFWTADEIDLYQDLKDWERLTDGERHFIKY 107
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA +FM EVQ+ EARAFYGFQIA+ENIHSE YSLL++TYIK+ +E
Sbjct: 108 VLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIAMENIHSETYSLLIDTYIKDDNE 167
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+A +P + KKA WAL WI+ ++ FA RL+AFA +EGIFFSGSFCAIFWLKKR
Sbjct: 168 KEFLFKACLNIPVINKKAQWALKWINNNDNFASRLVAFAAIEGIFFSGSFCAIFWLKKRS 227
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLLYS+++NKL++E V I+ EAVEIE+EF+ +ALP
Sbjct: 228 LMPGLTFSNELISRDEGLHTDFACLLYSMMQNKLAKEEVNVIIAEAVEIEKEFISEALPV 287
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M +Y+EFVADRLL +LG K++ NPF+WM++I +QGKTNFFEKRVGEYQ
Sbjct: 288 ELIGMNSNMMKEYLEFVADRLLYSLGYPKLFNSKNPFEWMDMICIQGKTNFFEKRVGEYQ 347
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VMSS + VF+++ DF
Sbjct: 348 KSGVMSS----KEDKVFRLNADF 366
>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NPDR+ +FPI+Y +IW+ YK+AE+S WT EE+DLS D+ WE + EK FI
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMNEGEKFFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIAIEN+HSE YS+LL+TYI +++
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYITDTE 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK R+ A T+PC+ KKA+WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + NKL ER++ I+ AV+IEREF+CD++
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPTERIREIICSAVDIEREFICDSI 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLVALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|266919|sp|P29883.1|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
Length = 319
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W +T DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGF++AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
Length = 323
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 259/327 (79%), Gaps = 5/327 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ E LL N DRF + PI YP++WE YK+ EASFWTAEE+DLS D++ W +L E+H
Sbjct: 2 NLENELLLKENKDRFVLLPINYPKVWEKYKQHEASFWTAEEIDLSADMKDWNNLNDGERH 61
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FITHVLAFFAASDGIV ENLA FM EVQ+ EAR FYGFQI +ENIHSE Y+LL++TY+K
Sbjct: 62 FITHVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYVK 121
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK RLF A ETVP V KKA WAL WI+ FAERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 122 DPVEKDRLFHAIETVPAVTKKAKWALRWIENG-NFAERLVAFAAVEGIFFSGSFCSIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHC+FACLLY +L N+L EE+V I+++AV IE+EF+ D
Sbjct: 181 KKRGLMPGLTFSNELISRDEGLHCEFACLLYGMLENRLPEEQVHTIIRDAVAIEKEFITD 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP AL+GMN LMS+YIEFVADR L LG K++ NPFD+ME+ISLQGKTNFFEKRV
Sbjct: 241 ALPVALIGMNSKLMSEYIEFVADRWLSELGYTKIFNTANPFDFMEMISLQGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
G+YQKA VMS + F +DEDF
Sbjct: 301 GDYQKAGVMSGKD----TQTFSLDEDF 323
>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|451327718|gb|AGF36590.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|451327926|gb|AGF36797.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|407839735|gb|EKG00364.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NPDR+ +FPI+Y +IW+ YK+AE+S WT EE+DLS D+ WE + EK FI
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMNEGEKFFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIAIEN+HSE YS+LL+TYI +++
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYITDTE 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK R+ A T+PC+ KKA+WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + NKL ER++ I+ AV+IEREF+CD++
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPTERIREIICSAVDIEREFICDSI 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLVALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|389639056|ref|XP_003717161.1| ribonucleoside-diphosphate reductase small subunit [Magnaporthe
oryzae 70-15]
gi|351642980|gb|EHA50842.1| ribonucleoside-diphosphate reductase small subunit [Magnaporthe
oryzae 70-15]
Length = 412
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/310 (71%), Positives = 259/310 (83%), Gaps = 2/310 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+L NP RF +FPI+Y E+W+MYKKAEASFWTAEE+DLS+D+ W + LT DEK+FI
Sbjct: 73 DEPILQENPQRFVLFPIRYHEVWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKYFI 132
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK +
Sbjct: 133 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKET 192
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA RLIAFA VEGIFFSG+F +IFWLK
Sbjct: 193 AQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+SLL N+ ++E VK IV +AV+IE+EF+ +A
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFSLLNNRPNKEVVKEIVVDAVKIEQEFLTEA 312
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRVG
Sbjct: 313 LPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRATNPFDFMENISLGGKTNFFEKRVG 372
Query: 304 EYQKASVMSS 313
EYQKA VM+S
Sbjct: 373 EYQKAGVMAS 382
>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
Length = 337
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YKKAE+S WT EE+DL D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
Length = 390
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ WESL +EK
Sbjct: 66 PGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEK 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWA+ WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSQEREFLFNAIETLPCVKKKADWAMCWIGDKKATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIHKPSEERVREIIMNAVLIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K+Y NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYKAENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N F +D +F
Sbjct: 366 RVGEYQRMGVMSKPTDNS----FTLDAEF 390
>gi|373449611|gb|AEY74987.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNR 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|325558213|gb|ADZ29593.1| ribonucleotide reductase small subunit protein [Cowpox virus]
gi|325558859|gb|ADZ30236.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|392568085|gb|EIW61259.1| ribonucleotide reductase small subunit [Trametes versicolor
FP-101664 SS1]
Length = 410
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/334 (67%), Positives = 264/334 (79%), Gaps = 8/334 (2%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
+PE EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + LT DE
Sbjct: 77 LPEHMEPLLIESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDMHDWNNRLTNDE 136
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 137 RHFVSHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 196
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAI 179
IK+ E+ RLF A +T+PC+ KKADWAL WI E+ F+ERLIAFA VEGIFFSGSF +I
Sbjct: 197 IKDPQERERLFDAIDTIPCIKKKADWALRWISDKESAFSERLIAFAAVEGIFFSGSFASI 256
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + V I+KEAVEIE+EF
Sbjct: 257 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDIVLAIIKEAVEIEQEF 316
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K Y VTNPFD+M++ISLQGKTNFFE
Sbjct: 317 LTDALPCALIGMNATLMRQYIEFVADRLLVALGGEKFYNVTNPFDFMDMISLQGKTNFFE 376
Query: 300 KRVGEYQKASVMSSLNGN----GGNHVFKMDEDF 329
KRV +Y KA V +S + F +DEDF
Sbjct: 377 KRVSDYSKAGVSTSAQSTTSEVNTSKNFSVDEDF 410
>gi|449017028|dbj|BAM80430.1| ribonucleoside-diphosphate reductase beta chain [Cyanidioschyzon
merolae strain 10D]
Length = 484
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/323 (68%), Positives = 257/323 (79%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + +RF +FPI+YPE W YK+A ASFWT EEVDL QD+R W LT+ EKHFIT+
Sbjct: 162 EPLLMASTNRFVLFPIRYPETWSFYKRAVASFWTVEEVDLQQDLRDWSRLTSGEKHFITY 221
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ+SEAR+FY FQ+A+ENIHSEMYSLL++T+IK + E
Sbjct: 222 VLAFFAASDGIVNENLALRFSTEVQLSEARSFYMFQMAMENIHSEMYSLLIDTFIKETTE 281
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K RLFRA +T+PCV +KA+WAL W+ +FAERLIAFA VEGIFFSGSFCAIFWLKKRG
Sbjct: 282 KDRLFRAIDTLPCVRRKAEWALRWVGSDASFAERLIAFAAVEGIFFSGSFCAIFWLKKRG 341
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFAC ++ +LR K + ++ I+ +AVE ER FV +ALP
Sbjct: 342 LMPGLTFSNELISRDEGLHCDFACHVFHMLRYKPPDVLIRAIICDAVEQERAFVREALPV 401
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEF ADRLL AL VY V NPFDWMELISL GKTNFFE+RVGEYQ
Sbjct: 402 NLIGMNSTLMQQYIEFCADRLLVALHVDPVYRVENPFDWMELISLNGKTNFFERRVGEYQ 461
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA VM+ G + F++D DF
Sbjct: 462 KAGVMTFQPSGVGENDFRLDLDF 484
>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
Length = 409
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/337 (66%), Positives = 267/337 (79%), Gaps = 15/337 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLLT NP RF +FPI+Y E+W+MYKKAEASFWTAEE+DLS+D+ W + L DEK FI
Sbjct: 75 DEPLLTENPQRFVLFPIKYHEVWQMYKKAEASFWTAEEIDLSKDLHDWSNKLNDDEKFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 135 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 195 SQRTYLFNAIDTIPCIRKKADWALRWISDKDASFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ I+++AV IE+EF+ +A
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLVEDIIRDAVTIEQEFLTEA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y TNPFD+ME ISL GKTNFFEKRVG
Sbjct: 315 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKIYRSTNPFDFMENISLGGKTNFFEKRVG 374
Query: 304 EYQKASVMSSL-----------NGNGGNHVFKMDEDF 329
EYQKA VM+S N NGG+ F DEDF
Sbjct: 375 EYQKAGVMNSTKKFEESAEESKNENGGDFAF--DEDF 409
>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
gi|30316285|sp|Q9C167.2|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
Length = 410
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/341 (66%), Positives = 267/341 (78%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P EPLLT NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 72 PEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 131
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 KFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A +T+PC+ KKADWAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ ++ I+ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y TNPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKMDEDF 329
KRVG+YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVGDYQKAGVMNSTKKADADAEVAKNENGGD--FTFDEDF 410
>gi|336469285|gb|EGO57447.1| small subunit of ribonucleotide reductase [Neurospora tetrasperma
FGSC 2508]
gi|350291081|gb|EGZ72295.1| small subunit of ribonucleotide reductase [Neurospora tetrasperma
FGSC 2509]
Length = 410
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/341 (66%), Positives = 267/341 (78%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P EPLLT NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 72 PEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 131
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 KFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A +T+PC+ KKADWAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ ++ I+ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y TNPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKMDEDF 329
KRVG+YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVGDYQKAGVMNSTKKVDADAEVVKNENGGD--FTFDEDF 410
>gi|336271379|ref|XP_003350448.1| hypothetical protein SMAC_02161 [Sordaria macrospora k-hell]
gi|380090970|emb|CCC11503.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 410
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/341 (66%), Positives = 267/341 (78%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P EPLLT NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + LT DE
Sbjct: 72 PEEAAEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTDDE 131
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 RFFVSHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A +T+PC+ KKADWAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ ++ I+ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQDIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKVYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKMDEDF 329
KRV +YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVADYQKAGVMNSTKKVDPDAEVVKNENGGD--FTFDEDF 410
>gi|406672898|ref|ZP_11080123.1| ribonucleoside-diphosphate reductase small chain [Bergeyella
zoohelcum CCUG 30536]
gi|405587442|gb|EKB61170.1| ribonucleoside-diphosphate reductase small chain [Bergeyella
zoohelcum CCUG 30536]
Length = 329
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/325 (70%), Positives = 262/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL N DRF +FPIQ+ +IW+ YK AEASFWTAEEVDLS D+ W++ L +E+ FI+
Sbjct: 9 EPLLIENKDRFVIFPIQHNDIWKFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 68
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENLA F++EVQ EAR FYGFQI IENIHSEMYSLL++TY+K+
Sbjct: 69 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPT 128
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK L RA ET+PCV KKA+WAL WI+ +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDYLLRAIETIPCVTKKAEWALRWIEKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY+ L+NKL EE V+ I+ +AV IE+EFV DAL
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYANHLKNKLPEETVREIIVDAVAIEKEFVTDAL 247
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL ALGC KV+ TNPFD+MELISLQGKTNFFE+RVGE
Sbjct: 248 PVKLIGMNAELMCQYIEFVADRLLVALGCNKVWNATNPFDFMELISLQGKTNFFERRVGE 307
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK V + N + F +DEDF
Sbjct: 308 YQKTGVAQT---NSEQNAFSLDEDF 329
>gi|126322530|ref|XP_001380256.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Monodelphis domestica]
Length = 361
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 41 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 100
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IENIHSEMYSLL++TYIK+
Sbjct: 101 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENIHSEMYSLLIDTYIKDPQ 160
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV +KADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 161 KREFLFNAIETMPCVKRKADWALQWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 220
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERVK I+ AVEIE+EF+ DAL
Sbjct: 221 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNKPSEERVKEIIINAVEIEQEFLTDAL 280
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+G+N LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 281 PVGLIGINSTLMKQYIEFVADRLLVELGFSKVFQSDNPFDFMENISLEGKTNFFEKRVSE 340
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 341 YQRFAVMAETTDN----VFTLDADF 361
>gi|449549662|gb|EMD40627.1| hypothetical protein CERSUDRAFT_111206 [Ceriporiopsis subvermispora
B]
Length = 400
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/330 (68%), Positives = 265/330 (80%), Gaps = 8/330 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLLT + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + LT DE+HF+
Sbjct: 73 QEPLLTESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLTNDERHFV 132
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV+EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 133 SHVLAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 192
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A +T+PC+ +KADWAL WI D +FAERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 193 KQREHLFDAIDTIPCIKRKADWALRWISDKRSSFAERLIAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E V+ I+ EAVEIE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRRIIMEAVEIEQEFLTDA 312
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+M+LISLQGKTNFFEKRV
Sbjct: 313 LPCALIGMNSKLMCQYIEFVADRLLVALGDPKVYNATNPFDFMDLISLQGKTNFFEKRVS 372
Query: 304 EYQKASVMSSLNGNGGN----HVFKMDEDF 329
+Y KA + +S G G N F +DEDF
Sbjct: 373 DYSKAGINAS--GAGANVEPSRGFTLDEDF 400
>gi|432100630|gb|ELK29158.1| Ribonucleoside-diphosphate reductase subunit M2, partial [Myotis
davidii]
Length = 331
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE L ++E+
Sbjct: 7 PGAQEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEVLKSEER 66
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 67 YFISHVLAFFAASDGIVNENLVERFRQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 126
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 127 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 186
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K +E+RVK I+ AV IE+EF+
Sbjct: 187 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPAEQRVKEIITNAVRIEQEFL 246
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM +YIEFVADRLL LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 247 TEALPVKLIGMNCTLMKRYIEFVADRLLLELGFSKVFRVENPFDFMENISLEGKTNFFEK 306
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 307 RVGEYQRMGVMSSPTENS----FTLDADF 331
>gi|358374795|dbj|GAA91384.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
kawachii IFO 4308]
Length = 396
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/342 (67%), Positives = 266/342 (77%), Gaps = 18/342 (5%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
P I E EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L
Sbjct: 59 PGIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRL 118
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DE++FI+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL
Sbjct: 119 NDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLL 178
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK +++ LF A +T+PC+AKKADWA+ WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 179 IDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLVAFAAVEGIFFSGS 238
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ I+ EAV I
Sbjct: 239 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGI 298
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ DALPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKT
Sbjct: 299 EQEFLTDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKT 358
Query: 296 NFFEKRVGEYQKASVMSS--------LNGNGGNHVFKMDEDF 329
NFFEKRVG+YQKA VM+S NGNG DEDF
Sbjct: 359 NFFEKRVGDYQKAGVMASTKKEEEPKTNGNG----LSFDEDF 396
>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
Length = 335
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/311 (70%), Positives = 254/311 (81%), Gaps = 1/311 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M +I EEPLL N DRF +FPI+Y +IW MYKKAEASFWTAEE+DL+ D+ +WE+ L +
Sbjct: 1 MQAIMEEPLLKENKDRFVLFPIKYTDIWNMYKKAEASFWTAEEIDLASDVNEWENKLNDN 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI +VLAFFAASDGIV ENLA +FM EVQ+ EAR FYGFQIAIENIHSE YSLL++T
Sbjct: 61 ERHFIKNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKN DEK LF A ET+PCV KKADWAL WI S++FAERL+AFA VEGIFFSGSFC+I
Sbjct: 121 YIKNPDEKKVLFNAIETIPCVKKKADWALRWITNSKSFAERLVAFAAVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L NKL + ++ I+++AVE E+EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYNKLNNKLDVKTIESIIRDAVECEKEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
V D+LP L+GMN MS+YIEF ADRLL +LG K+Y NPFDWME+ISL K NFFE
Sbjct: 241 VTDSLPVDLIGMNSREMSKYIEFCADRLLVSLGYKKIYNSANPFDWMEMISLMRKANFFE 300
Query: 300 KRVGEYQKASV 310
+V EY KA V
Sbjct: 301 GKVSEYAKAGV 311
>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
chain); putative [Variola major virus]
gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
Length = 333
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S ++ ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YI+FVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIKFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 379
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/327 (68%), Positives = 255/327 (77%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
IP EP L NP+RF +FPIQ E+W+MYKKAEASFWTAEE+DL D++ W LT +E+HF
Sbjct: 57 IPIEPFLVENPNRFVLFPIQEHEVWQMYKKAEASFWTAEELDLVHDLKDWSKLTDNERHF 116
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I HVLAFFAASDGIV ENLA F EVQV EAR FYGFQIAIENIHSE+YSLL++TYIK+
Sbjct: 117 IKHVLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKD 176
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK L RA ET+PCV KKA WA+ W D ++ ERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 177 AIEKDHLLRAIETIPCVTKKAHWAIKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWL 236
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGL+FSNELISRDEG+H DFACLLYS L KL E RV IV++AV IE EFV D
Sbjct: 237 KKRGLMPGLSFSNELISRDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHEFVRD 296
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+LP L+GMN LM QYIEFVADRLL +LG K+Y NPFDWM++ISLQGKTNFFEKRV
Sbjct: 297 SLPVELIGMNSGLMCQYIEFVADRLLYSLGVSKIYHAKNPFDWMDMISLQGKTNFFEKRV 356
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEY KA V + VF +D DF
Sbjct: 357 GEYSKAGVGVA----AEEQVFTLDADF 379
>gi|402079098|gb|EJT74363.1| ribonucleoside-diphosphate reductase small subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 420
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/342 (66%), Positives = 267/342 (78%), Gaps = 20/342 (5%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DEK+FI
Sbjct: 81 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKLNEDEKYFI 140
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 141 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 200
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA RLIAFA VEGIFFSG+F +IFWLK
Sbjct: 201 AQRTYLFNAVDTIPCIRKKADWALKWISDKESTFASRLIAFAAVEGIFFSGAFASIFWLK 260
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S ++N+ S+E V+ I+ +AV IE+EF+ +A
Sbjct: 261 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHMKNRPSKETVQKIIVDAVNIEQEFLTEA 320
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY +NPFD+ME ISL GKTNFFEKRVG
Sbjct: 321 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYRASNPFDFMENISLGGKTNFFEKRVG 380
Query: 304 EYQKASVMSSLN----------------GNGGNHVFKMDEDF 329
EYQKA VM+S + GNGG+ F D+DF
Sbjct: 381 EYQKAGVMASTSKKVAEEESDSTPEPAGGNGGDFTF--DDDF 420
>gi|423315654|ref|ZP_17293559.1| ribonucleoside-diphosphate reductase subunit M2 [Bergeyella
zoohelcum ATCC 43767]
gi|405585758|gb|EKB59561.1| ribonucleoside-diphosphate reductase subunit M2 [Bergeyella
zoohelcum ATCC 43767]
Length = 329
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/325 (70%), Positives = 261/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL N DRF +FPIQ+ +IW+ YK AEASFWTAEEVDLS D+ W++ L +E+ FI+
Sbjct: 9 EPLLIENKDRFVIFPIQHNDIWQFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 68
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENLA F++EVQ EAR FYGFQI IENIHSEMYSLL++TY+K+
Sbjct: 69 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPI 128
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK L RA ET+PCV KKA WAL WI +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDYLLRAIETIPCVTKKAKWALRWITKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY+ L+NKLSEE VK I+ +AV IE+EFV DAL
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYANHLQNKLSEETVKEIIVDAVAIEKEFVTDAL 247
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL ALGC KV+ TNPFD+MELISLQGKTNFFE+RVGE
Sbjct: 248 PVKLIGMNAELMCQYIEFVADRLLVALGCNKVWNATNPFDFMELISLQGKTNFFERRVGE 307
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK V S + + F +DEDF
Sbjct: 308 YQKTGVAQS---SSEQNAFSLDEDF 329
>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFF ASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|355751100|gb|EHH55355.1| hypothetical protein EGM_04551, partial [Macaca fascicularis]
Length = 366
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 42 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 101
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 102 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 161
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 162 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 221
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL+++ L +K EERV+ + AV IE+EF+
Sbjct: 222 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFNHLVHKPLEERVRERIINAVRIEQEFL 281
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 282 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 341
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 342 RVGEYQRMGVMSSPTENS----FTLDADF 366
>gi|346465789|gb|AEO32739.1| hypothetical protein [Amblyomma maculatum]
Length = 395
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/327 (68%), Positives = 265/327 (81%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EPLL NP RF +FPI+Y +IW MYKKAEASFWT EEVDL++D+ WESL DE+HF
Sbjct: 73 VEDEPLLRENPRRFVIFPIEYEDIWRMYKKAEASFWTVEEVDLAKDLPHWESLKPDERHF 132
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+H+LAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYSLL++TYIK+
Sbjct: 133 ISHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYIKD 192
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ +LF A ET+PC+ +KADWAL WI D + +F ER++AFA VEGIFFSGSF +IFWL
Sbjct: 193 PAEREQLFNAIETMPCIKRKADWALRWIGDRNASFGERVVAFAAVEGIFFSGSFASIFWL 252
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLH DFACL++S L +K S ERVK IV +AV IE+EF+ +
Sbjct: 253 KKRGLMPGLTFSNELISRDEGLHTDFACLMFSHLVHKPSAERVKQIVCDAVVIEQEFLTE 312
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP AL+GMN LM +YIEFVADRLL LGC KVY NPFD+ME ISL+GKTNFFEK+V
Sbjct: 313 ALPVALIGMNCELMKRYIEFVADRLLVELGCEKVYNSENPFDFMEHISLEGKTNFFEKKV 372
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEYQKA VM+ VF +D DF
Sbjct: 373 GEYQKAGVMAKKE----EQVFTLDADF 395
>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
gi|392869916|gb|EAS28456.2| ribonucleoside-diphosphate reductase small chain [Coccidioides
immitis RS]
Length = 408
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/335 (67%), Positives = 262/335 (78%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EEPLL NP RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W L DE++FI
Sbjct: 76 EEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDDERYFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RLIAFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFAQRLIAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR++ E V+ I+ EAVEIE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPGPEAVQAIITEAVEIEKEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNATNPFDFMDNISLSGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTQKKEDTEEAIENGG--AFRFDEDF 408
>gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 324
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/325 (70%), Positives = 261/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL N DRF +FPIQ+ +IW+ YK AEASFWTAEEVDLS D+ W++ L +E+ FI+
Sbjct: 4 EPLLQDNKDRFVIFPIQHNDIWQFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 63
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENLA F++EVQ EAR FYGFQI IENIHSEMYSLL++TY+K+
Sbjct: 64 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPA 123
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK L RA ET+PCV KKA WAL WI +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDYLLRAIETIPCVTKKAKWALRWITKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY + L+NKLSEE ++ I+ +AV IE+EFV DAL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACLLYVNHLQNKLSEETIREIIVDAVAIEKEFVTDAL 242
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL ALGC KV+ TNPFD+MELISLQGKTNFFE+RVGE
Sbjct: 243 PVKLIGMNAELMCQYIEFVADRLLVALGCNKVWNATNPFDFMELISLQGKTNFFERRVGE 302
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK V + N + F +DEDF
Sbjct: 303 YQKTGVAQT---NSEQNTFSLDEDF 324
>gi|449495040|ref|XP_002198998.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Taeniopygia guttata]
Length = 346
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/327 (69%), Positives = 263/327 (80%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ EEPLL N RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+F
Sbjct: 24 LDEEPLLRKNHRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYF 83
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL ARF +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIK+
Sbjct: 84 ISHVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKD 143
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
++ LF A ET+PCV KKADWAL WI+ E TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 144 PKKRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWL 203
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L N+ SEERV I+ AVEIE+EF+ +
Sbjct: 204 KKRGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVCEIIVNAVEIEQEFLTE 263
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRLL LG KV+ V NPFD+ME ISL+GKTNFFEKRV
Sbjct: 264 ALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFNVENPFDFMENISLEGKTNFFEKRV 323
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQ+ +VM+ N VF +D DF
Sbjct: 324 SEYQRFAVMAETMDN----VFTLDADF 346
>gi|348675019|gb|EGZ14837.1| hypothetical protein PHYSODRAFT_346505 [Phytophthora sojae]
Length = 386
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 256/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP L NP+RF +FPIQ ++W+MYKKAEASFWTAEE+DL D+ W+ LT +E+ FI H
Sbjct: 67 EPYLVSNPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWQKLTDNERFFIKH 126
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F EVQV EAR FYGFQIAIENIH+E+YSLL++TYIK++ E
Sbjct: 127 VLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHAEVYSLLIDTYIKDTME 186
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ L RA ET+PCV KKA WAL W D ++ ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 187 KNHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL+FSNELISRDEG+H DFACL+YS L NKL E RV IV+EAV IE EFVCD+LP
Sbjct: 247 GLMPGLSFSNELISRDEGMHTDFACLMYSKLVNKLPESRVHEIVREAVTIEHEFVCDSLP 306
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL +LG K+Y V NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 307 VELIGMNSTLMCQYIEFVADRLLYSLGVPKLYNVKNPFDWMDMISLQGKTNFFEKRVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
KA V + VF +D DF
Sbjct: 367 SKAGVGVA----AEEQVFTLDADF 386
>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
posadasii str. Silveira]
Length = 408
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/335 (67%), Positives = 262/335 (78%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EEPLL NP RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W L DE++FI
Sbjct: 76 EEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDDERYFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RLIAFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFAQRLIAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR++ E V+ I+ EAVEIE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPGPEAVQAIITEAVEIEKEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNATNPFDFMDNISLSGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTQKKEDTEEAIENGG--AFRFDEDF 408
>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 410
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/314 (69%), Positives = 256/314 (81%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P +EPLL NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 67 PEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 126
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 127 RFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 186
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I ++ ++ LF A E +PC+ KKADWAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 187 ISDTRQRKYLFNAIENIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 246
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL N+ S E V+ I+ EAVEIE+EF
Sbjct: 247 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNNRPSNEEVRAIITEAVEIEQEF 306
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 307 LSDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNATNPFDFMENISLAGKTNFFE 366
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 367 KRVGDYQKAGVMAS 380
>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 323
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 260/324 (80%), Gaps = 6/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFIT 65
EP+L N DRF +FPI + EIW+MYKKAEASFWTAEE+DL+ D+ W+ L DEK+FI
Sbjct: 5 EPILRENKDRFVLFPINHAEIWQMYKKAEASFWTAEEIDLTSDLLDWDRKLNNDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA FM EVQ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 65 HILAFFAASDGIVNENLAVNFMSEVQYPEARCFYGFQIMMENIHSEAYSLLIDTYIKDPT 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+K+RLF+A ET+PC++ KADWAL WI +F+ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 DKNRLFKALETIPCISNKADWALRWISQG-SFSERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL+F+NELISRDEGLHCDFACLLYS L NKL E ++ I+ AV IE+EFV DALP
Sbjct: 184 GLMPGLSFANELISRDEGLHCDFACLLYSQLNNKLPLETLQAIISHAVAIEKEFVQDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL ALG K+Y V NPFD+M+LIS+ GKTNFFE+RV EY
Sbjct: 244 VRLIGMNATLMCQYIEFVADRLLVALGSPKLYNVDNPFDFMDLISMPGKTNFFERRVSEY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ VMS+ NHVF + EDF
Sbjct: 304 QKSGVMST----KENHVFTIHEDF 323
>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
Length = 319
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGL CDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLRCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMETYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
+ VMS + NH F +D DF
Sbjct: 302 QMGVMSQED----NH-FSLDVDF 319
>gi|436834327|ref|YP_007319543.1| Ribonucleoside-diphosphate reductase [Fibrella aestuarina BUZ 2]
gi|384065740|emb|CCG98950.1| Ribonucleoside-diphosphate reductase [Fibrella aestuarina BUZ 2]
Length = 330
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 262/324 (80%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + RF +FPI++ +IW+MYKK EASFWTAEE+DL QD++ W SL+ E+HFI+H
Sbjct: 8 EPLLEEDKSRFVLFPIKHNDIWQMYKKHEASFWTAEEIDLGQDLKDWNSLSDGERHFISH 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TYIK+ E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIMMENIHSETYSLLIDTYIKDPIE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K R+ A +T+PCV KKADWAL WI +FAERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 128 KDRMLNAIDTIPCVQKKADWALRWISNG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKRG 186
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY+ +RNK+ + + I++ AVEIE+EFV DALP
Sbjct: 187 LMPGLTFSNELISRDEGLHRDFACLLYTDHIRNKMDPQAIYDIIRNAVEIEQEFVSDALP 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYIEFVAD LL +LG +Y V+NPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 247 VSLIGMNADLMKQYIEFVADHLLVSLGLNSIYNVSNPFDFMDMISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM+S + + F M+EDF
Sbjct: 307 QKAGVMASTSKDKEVTKFSMEEDF 330
>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
Length = 319
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YK+AE+S WT EE+DL D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|383861071|ref|XP_003706010.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Megachile rotundata]
Length = 383
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQ+P+IW+MYKKAEASFWT EEVDLS+D W+ LT+ EKHF
Sbjct: 61 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDTFDWDRLTSSEKHF 120
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQ+A+EN+HSEMYSLL++TYI +
Sbjct: 121 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIAD 180
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E+ LF A E +PCVAKKA+WALNWI+ + TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 181 AKERDFLFNAIENLPCVAKKANWALNWINHETATFPERVVAFAAVEGIFFSGSFAAIFWL 240
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S ERV I+K+AVEIE+EF+ D
Sbjct: 241 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIIQKPSSERVTSIIKDAVEIEQEFLTD 300
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LGC KVY NPFD+ME ISL+GKTNFFEK+V
Sbjct: 301 ALPVEMIGMNCKLMCQYIEFVADRLLVELGCQKVYMSENPFDFMEHISLEGKTNFFEKKV 360
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 361 GEYQKWGVMQ 370
>gi|407406733|gb|EKF30906.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi marinkellei]
Length = 337
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NPDR+ +FPI+Y +IW+ YK+AE+S WT EE+DLS D+ WE ++ E+ FI
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMSEGERFFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIAIEN+HSE YS+LL+ YI +
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDMYITDPT 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK R+ A T+PC+ KKA+WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + NKL +ER++ I+ AV+IEREF+CDA+
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPKERIRDIICSAVDIEREFICDAI 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLLALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|340726313|ref|XP_003401504.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Bombus terrestris]
Length = 384
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQ+P+IW+MYKKAEASFWT EEVDLS+DI W L +DEKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDIFDWNHLNSDEKHF 121
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYS+L++TYI +
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITD 181
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E+ LF A E +PCVAKKA+WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 TKERDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S +RV I+K+AV+IE+EF+ D
Sbjct: 242 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTD 301
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 302 ALPVQMIGMNCTLMCQYIEFVADRLLTELGCEKIYMSENPFDFMEHISLEGKTNFFEKKV 361
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 362 GEYQKWGVMQ 371
>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Meleagris gallopavo]
Length = 353
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQ+P+IW+MYK+A+ASFWTAEEVDLS+D+ W L DEK+FI+
Sbjct: 33 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 92
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL ARF +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIK+ +
Sbjct: 93 HILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 152
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 153 KRDFLFNAIETMPCVKKKADWALKWIEDRHSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L N+ SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 272
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 273 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 332
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 333 YQRFAVMAETMDN----VFTLDADF 353
>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Equus caballus]
Length = 351
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W LT+DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLTSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALQWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVDLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ +HVF +D DF
Sbjct: 331 YQRFAVMAETT----DHVFTLDADF 351
>gi|3914640|sp|O15910.1|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YK+AE+S WT EE+DL D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
Length = 408
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/335 (67%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W + L DE++FI
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERYFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+ I+ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 408
>gi|449139107|gb|AGE89912.1| RR2B [Spodoptera littoralis NPV]
Length = 334
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 258/324 (79%), Gaps = 1/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF MFPI+YP+IW MYKKAEASFWT EEVDLS+D++ W+SL E+ FI H
Sbjct: 11 EPLLRENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDMKDWDSLKESERDFIKH 70
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+A+EN+HSEMYSLL++TY+++ DE
Sbjct: 71 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAMENVHSEMYSLLIDTYVRDIDE 130
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K RLF A ET+P +AKKA W++ WI + TFAER+IAFA VEGIFFSGSF AIFW+KKR
Sbjct: 131 KQRLFNAIETMPTIAKKAQWSIKWIKSDTATFAERIIAFAAVEGIFFSGSFAAIFWMKKR 190
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GL+PGLTFSNELISRDEGLH DFACL+YS + NK + ERV I+ +AV IE+EF+ +ALP
Sbjct: 191 GLLPGLTFSNELISRDEGLHTDFACLMYSHIVNKPTRERVLDIITDAVSIEKEFLTEALP 250
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
A++GMN LMSQYIEFVADRLL L + Y NPFD+M LISL+GKTNFFEK+V EY
Sbjct: 251 VAMLGMNNDLMSQYIEFVADRLLLELIGQRHYNTKNPFDFMNLISLEGKTNFFEKKVSEY 310
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM + N + F +D DF
Sbjct: 311 QKYGVMKGRSSNPMDDTFTLDADF 334
>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H143]
gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H88]
Length = 413
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/338 (67%), Positives = 264/338 (78%), Gaps = 16/338 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP+RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI
Sbjct: 78 DEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A ET+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 198 KQRTYLFDAIETIPCIRKKADWAIRWIEDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 257
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR++ S E V+ I+ EAV IE+EF+ DA
Sbjct: 258 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVEKIITEAVTIEQEFLSDA 317
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM QYIEFVADRLL ALG KVY TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 318 LPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNSTNPFDFMDNISLAGKTNFFEKRVG 377
Query: 304 EYQKASVMSSLNG------------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F DEDF
Sbjct: 378 DYQKAGVMASTKKEAATDETEKQIENGG--AFNFDEDF 413
>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis ER-3]
gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
Length = 413
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/338 (66%), Positives = 265/338 (78%), Gaps = 16/338 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP+RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI
Sbjct: 78 EEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSSEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI+ E+ FA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 198 KQRTYLFDAIDTIPCIRKKADWAIRWIEDKESSFAQRLVAFAAVEGIFFSGSFASIFWLK 257
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR++ S E V+ I+ EAV IE+EF+ DA
Sbjct: 258 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVERIITEAVTIEQEFLSDA 317
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM QYIEFVADRLL ALG KVY TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 318 LPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNSTNPFDFMDNISLAGKTNFFEKRVG 377
Query: 304 EYQKASVMSSLNG------------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F DEDF
Sbjct: 378 DYQKAGVMASTKKEAATEETEKQIENGG--AFTFDEDF 413
>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
gi|108873070|gb|EAT37295.1| AAEL010691-PA [Aedes aegypti]
Length = 397
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 262/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ WE L + EK
Sbjct: 75 PSI--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWEKLKSGEK 132
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 133 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 192
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
++S E+ LF A + +PCV KKADWALNWI + F ER++AFA VEGIFFSGSF +IF
Sbjct: 193 RDSKEREYLFNAIDNLPCVKKKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFASIF 252
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV I++EAV IE+EF+
Sbjct: 253 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFL 312
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP L+GMN LMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 313 TKALPVDLLGMNCDLMSQYIEFVADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEK 372
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 373 KVGEYQKWGVMA----NRLDNVFTLDADF 397
>gi|885759|gb|AAA69374.1| E4L [Variola virus]
gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|358397948|gb|EHK47316.1| hypothetical protein TRIATDRAFT_154508 [Trichoderma atroviride IMI
206040]
Length = 418
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/343 (64%), Positives = 267/343 (77%), Gaps = 17/343 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 78 PDEIDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 137
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K+FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 138 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 197
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
+K +++ LF A ET+PC+ KKADWA+ WI D +FA+RL+AFA VEGIFFSG+F +I
Sbjct: 198 VKEHSQRNYLFNAIETIPCIRKKADWAIKWIQDKDSSFAQRLVAFAAVEGIFFSGAFASI 257
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+N+ S+E ++ I+ +AV IE+EF
Sbjct: 258 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEIIREIITDAVRIEQEF 317
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFE
Sbjct: 318 LTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKIYKSSNPFDFMENISLGGKTNFFE 377
Query: 300 KRVGEYQKASVMSSLN-------------GNGGNHVFKMDEDF 329
KRVGEYQKA VM+S NGG+ F D+DF
Sbjct: 378 KRVGEYQKAGVMNSTKKPVEASSAEESKADNGGD--FSFDDDF 418
>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 257/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFF ASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGXGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|348688371|gb|EGZ28185.1| hypothetical protein PHYSODRAFT_321864 [Phytophthora sojae]
gi|348688372|gb|EGZ28186.1| hypothetical protein PHYSODRAFT_284208 [Phytophthora sojae]
Length = 384
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/327 (67%), Positives = 257/327 (78%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+P EP L NP+RF +FPIQ ++W+MYKKAEASFWTAEE+DL D++ W +LT +E+ F
Sbjct: 62 LPTEPFLVENPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLKDWANLTDNERFF 121
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I HVLAFFAASDGIV ENLA F EVQV EAR FYGFQIAIENIHSE+YSLL++TYIK+
Sbjct: 122 IKHVLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKD 181
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK L RA ET+PCV KKA WAL W D ++ ERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 182 AVEKDHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGL+FSNELISRDEG+H DFACL+YS L NKL E RV IV++AV IE EFV D
Sbjct: 242 KKRGLMPGLSFSNELISRDEGMHTDFACLMYSKLVNKLPESRVHEIVRDAVTIEHEFVRD 301
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+LP L+GMN +LM QYIEFVADRLL +LG K+Y NPFDWM++ISLQGKTNFFEKRV
Sbjct: 302 SLPVELIGMNSSLMCQYIEFVADRLLYSLGVSKIYNAKNPFDWMDMISLQGKTNFFEKRV 361
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEY KA V + VF +D DF
Sbjct: 362 GEYSKAGVGVA----AEEQVFTLDADF 384
>gi|340726315|ref|XP_003401505.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Bombus terrestris]
Length = 366
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/309 (71%), Positives = 257/309 (83%), Gaps = 2/309 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQ+P+IW+MYKKAEASFWT EEVDLS+DI W L +DEKHF
Sbjct: 44 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDIFDWNHLNSDEKHF 103
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYS+L++TYI +
Sbjct: 104 ISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITD 163
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E+ LF A E +PCVAKKA+WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 164 TKERDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 223
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S +RV I+K+AV+IE+EF+ D
Sbjct: 224 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTD 283
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 284 ALPVQMIGMNCTLMCQYIEFVADRLLTELGCEKIYMSENPFDFMEHISLEGKTNFFEKKV 343
Query: 303 GEYQKASVM 311
GEYQK VM
Sbjct: 344 GEYQKWGVM 352
>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YK+AE+S WT EE+DL D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVLIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|367051116|ref|XP_003655937.1| hypothetical protein THITE_2069122 [Thielavia terrestris NRRL 8126]
gi|347003201|gb|AEO69601.1| hypothetical protein THITE_2069122 [Thielavia terrestris NRRL 8126]
Length = 415
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/342 (65%), Positives = 265/342 (77%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 76 PEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 135
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K+FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 136 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 195
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A +T+PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 196 IKEPAQRTHLFNAIDTIPCIRKKADWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFASI 255
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ I+ +AV IE+EF
Sbjct: 256 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNKRPSKQVIQDIIVDAVRIEQEF 315
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 316 LTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKVYRSTNPFDFMENISLGGKTNFFE 375
Query: 300 KRVGEYQKASVMSSLNG------------NGGNHVFKMDEDF 329
KRVG+YQKA VM+S NGG+ F DEDF
Sbjct: 376 KRVGDYQKAGVMASTKKFVQEEAEEAKGENGGD--FSFDEDF 415
>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
Length = 408
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/335 (67%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W + L DE+ FI
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D + TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+ I+ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 408
>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
Length = 324
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 267/325 (82%), Gaps = 7/325 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L+ N +RF +FPIQ+ +IW YKKAEASFWTAEE+DLS D+ WE+ L+ DE+HF+
Sbjct: 5 EPILSENKNRFVLFPIQHEDIWSFYKKAEASFWTAEEIDLSPDLIDWETKLSDDERHFVK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQ+A+ENIHSE YSLL++TYIK+
Sbjct: 65 HVLAFFAASDGIVNENLAEHFLAEVQYTEAKFFYGFQVAMENIHSETYSLLIDTYIKDQK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF A +T+ CV KKADWAL WID +FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKNHLFNALDTIDCVRKKADWALRWIDNG-SFAERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGL+FSNELISRDEGLHCDFACLLY+ L ++LS+E+V+ I+ +AVEIE+EFV DAL
Sbjct: 184 GLMPGLSFSNELISRDEGLHCDFACLLYTKHLIHQLSKEQVQEIILDAVEIEKEFVTDAL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL LG KV+ TNPFD+M++IS+QGKTNFFEKRV E
Sbjct: 244 PVKLIGMNADLMAQYIEFVADRLLTELGNPKVFNTTNPFDFMDMISIQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VMS N + F +DE+F
Sbjct: 304 YQKSGVMS----NKEDQTFSLDEEF 324
>gi|358383626|gb|EHK21290.1| hypothetical protein TRIVIDRAFT_78453 [Trichoderma virens Gv29-8]
Length = 415
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 269/342 (78%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 76 PDEVDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 135
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K+FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 136 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 195
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK + +++ LF A ET+PC+ KKADWA+ WI D + +FA+RL+AFA VEGIFFSG+F +I
Sbjct: 196 IKENSQRNYLFNAIETIPCIRKKADWAIKWIQDKNSSFAQRLVAFAAVEGIFFSGAFASI 255
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+N+ S+E ++ I+ +AV IE+EF
Sbjct: 256 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEVIRDIITDAVRIEQEF 315
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFE
Sbjct: 316 LTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKIYKSSNPFDFMENISLGGKTNFFE 375
Query: 300 KRVGEYQKASVMSSL------------NGNGGNHVFKMDEDF 329
KRV +YQKA VM+S + NGG+ F D+DF
Sbjct: 376 KRVADYQKAGVMNSTKKVVEEAGAESKDSNGGD--FSFDDDF 415
>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Apis mellifera]
Length = 384
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQ+P+IW+MYKKAEASFWT EEVDLS+D+ W +LTA EKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNNLTASEKHF 121
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQ+A+EN+HSEMYSLL++TYI +
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIAD 181
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E+ LF A E +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 AKERDFLFNAIENLPCVAKKAHWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S ERV I+K+AV+IE+EF+ D
Sbjct: 242 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCERVTSIIKDAVKIEQEFLTD 301
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 302 ALPVEMIGMNCKLMCQYIEFVADRLLVELGCKKIYMSENPFDFMEHISLEGKTNFFEKKV 361
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 362 GEYQKWGVMQ 371
>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
Length = 410
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/314 (69%), Positives = 255/314 (81%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P +EPLL NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 67 PEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 126
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 127 RFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 186
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I ++ LF A + +PC+ KKADWAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 187 ISEPRQRKYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 246
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL N+ S+E V+ I+ EAVEIE+EF
Sbjct: 247 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNNRPSKESVRAIITEAVEIEQEF 306
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 307 LSDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNATNPFDFMENISLAGKTNFFE 366
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 367 KRVGDYQKAGVMAS 380
>gi|340522213|gb|EGR52446.1| predicted protein [Trichoderma reesei QM6a]
Length = 417
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/342 (64%), Positives = 268/342 (78%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 78 PEEIDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 137
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K+FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 138 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 197
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A ET+PC+ KKADWA+ WI D + +FA+RL+AFA VEGIFFSG+F +I
Sbjct: 198 IKEHSQRNYLFNAIETIPCIRKKADWAIRWIQDKNSSFAQRLVAFAAVEGIFFSGAFASI 257
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+N+ S+E ++ I+ +AV IE+EF
Sbjct: 258 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEVIRDIITDAVRIEQEF 317
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY +NPFD+ME ISL GKTNFFE
Sbjct: 318 LTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKSSNPFDFMENISLGGKTNFFE 377
Query: 300 KRVGEYQKASVMSSL------------NGNGGNHVFKMDEDF 329
KRV +YQKA VM+S + NGG+ F D+DF
Sbjct: 378 KRVADYQKAGVMNSTKKVVDDSSADAKDSNGGD--FSFDDDF 417
>gi|336373646|gb|EGO01984.1| hypothetical protein SERLA73DRAFT_104202 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386462|gb|EGO27608.1| hypothetical protein SERLADRAFT_354853 [Serpula lacrymans var.
lacrymans S7.9]
Length = 379
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/329 (67%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E+HFI
Sbjct: 51 EEPLLKDSKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDVHDWANRLNDNERHFI 110
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 111 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 170
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ LF A ET+PCV +KADWAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 171 SEREYLFDAVETIPCVKRKADWALTWISDNRSTFAERLVAFAAVEGIFFSGSFASIFWLK 230
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + V+ I+ EAV IE++F+ DA
Sbjct: 231 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDVVRRIITEAVVIEQDFLTDA 290
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL +LG KVY VTNPFD+M++ISLQGKTNFFEKRV
Sbjct: 291 LPCALIGMNSKLMRQYIEFVADRLLVSLGNDKVYNVTNPFDFMDMISLQGKTNFFEKRVS 350
Query: 304 EYQKASV---MSSLNGNGGNHVFKMDEDF 329
+Y KA+V +S + + F +DEDF
Sbjct: 351 DYTKANVNHNNASQQESTTSKTFSLDEDF 379
>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
Length = 529
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/335 (67%), Positives = 259/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W + L DE+ FI
Sbjct: 197 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 256
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 257 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 316
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 317 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 376
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+ I+ EAV IE+EF+ DA
Sbjct: 377 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAVTIEQEFLTDA 436
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 437 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 496
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 497 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 529
>gi|340382685|ref|XP_003389849.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Amphimedon queenslandica]
Length = 389
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 258/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQ+ EIW+ YKKA ASFWT EEVDLS+D++ WE L +E++FI H
Sbjct: 70 EPLLEENPRRFVLFPIQHTEIWQFYKKAVASFWTVEEVDLSKDLQDWEKLKEEERYFIKH 129
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI + E
Sbjct: 130 VLAFFAASDGIVNENLVERFSSEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYISDKHE 189
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
LF A E +PCV KKADWA+NWI ++F ER+IAFA VEGIFFSGSF AIFWLKKR
Sbjct: 190 SDYLFNAIENMPCVKKKADWAINWIQSEDDSFGERVIAFAAVEGIFFSGSFAAIFWLKKR 249
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL+Y L NK + ER+K I+ +AV IE+EF+ +ALP
Sbjct: 250 GLMPGLTFSNELISRDEGLHCDFACLMYKNLINKPTSERIKHIITDAVLIEQEFLTEALP 309
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYIEFVADRLL AL KVY V+NPFD+ME ISL+GKTNFFEKRVG+Y
Sbjct: 310 CNLIGMNCVLMKQYIEFVADRLLVALDQPKVYNVSNPFDFMENISLEGKTNFFEKRVGDY 369
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ VMS HVF ++ +F
Sbjct: 370 QKSGVMS----KKTEHVFTLEAEF 389
>gi|885717|gb|AAA69333.1| C8L [Variola virus]
gi|885826|gb|AAA69439.1| C8L [Variola virus]
gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YI+FVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIKFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
PN500]
Length = 335
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/336 (65%), Positives = 265/336 (78%), Gaps = 8/336 (2%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M +I EEP+L N DRF +FPI+Y +IW+MYKKAEASFWTAEE+DL+ DI WE+ L +
Sbjct: 1 MQTIIEEPILKENKDRFVLFPIKYADIWQMYKKAEASFWTAEEIDLAGDIGDWENKLNDN 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFIT+VLAFFAASDGIV ENLA +FM EVQ+ EAR FYGFQIAIENIHSE YSLL++T
Sbjct: 61 ERHFITNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK+S+ K +F A +T+P V KKADWAL WI S++FAERL+AFA VEGIFFSGSFC+I
Sbjct: 121 YIKDSETKRNIFHAIDTIPAVKKKADWALRWISNSKSFAERLVAFAAVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLHCDFACLLY L+NKL ++ I+++AV E+EF
Sbjct: 181 FWLKKRGLMHGLTFSNELISRDEGLHCDFACLLYQKLQNKLDNNTIETIIRDAVACEKEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ ++LP L+GMN MSQYIEF ADRLL +LG K+Y +NPFDWME+ISLQ KTNFFE
Sbjct: 241 ITESLPVDLIGMNSRSMSQYIEFCADRLLLSLGYKKIYNSSNPFDWMEMISLQRKTNFFE 300
Query: 300 KRVGEYQKASVM------SSLNGNGGNHVFKMDEDF 329
+V EYQK+ V +S N N F +DEDF
Sbjct: 301 GKVSEYQKSGVAKQGQPSTSANPN-QQRKFVLDEDF 335
>gi|395818124|ref|XP_003782487.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Otolemur garnettii]
Length = 351
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKCFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 EREFLFNAIETMPCVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ EAV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFRYLVNKPSEERVREIIIEAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISLQGKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLQGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMTETTDN----VFTLDADF 351
>gi|395512223|ref|XP_003760342.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Sarcophilus harrisii]
Length = 351
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI IENIHSEMYSLL++TYIK+
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQILIENIHSEMYSLLIDTYIKDPQ 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV +KADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPCVKRKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERVK I+ AVEIE+EF+ DAL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNKPSEERVKEIIIHAVEIEQEFLTDAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+G+N LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGINCTLMKQYIEFVADRLLVELGFSKIFHSDNPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 407
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/344 (64%), Positives = 266/344 (77%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP+RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 66 PEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 125
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 126 RYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 185
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +K+ LF A +T+PC+ KKADWA+ WI D + TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 186 IKEQAQKTYLFNAIDTIPCIKKKADWAVKWIQDKNSTFAQRLVAFAAVEGIFFSGSFASI 245
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L+++ S++ V+ ++ EAVEIE+EF
Sbjct: 246 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLKHRPSKQAVQDVITEAVEIEQEF 305
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL LG KVY NPFD+ME ISL GKTNFFE
Sbjct: 306 LTEALPCALLGMNSTLMKQYIEFVADRLLVTLGNDKVYKSANPFDFMENISLAGKTNFFE 365
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKMDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 366 KRVGDYQKAGVMAGTQKKHEDTEAQTEAKAENGGD--FNFDEDF 407
>gi|348665308|gb|EGZ05139.1| hypothetical protein PHYSODRAFT_348632 [Phytophthora sojae]
gi|348675010|gb|EGZ14828.1| hypothetical protein PHYSODRAFT_560974 [Phytophthora sojae]
Length = 386
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 256/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP L NP+RF +FPIQ ++W+MYKKAEASFWTAEE+DL D+ W+ LT +E+ FI H
Sbjct: 67 EPYLVSNPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWQKLTDNERFFIKH 126
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F EVQV +AR FYGFQIAIENIH+E+YSLL++TYIK++ E
Sbjct: 127 VLAFFAASDGIVNENLAMNFSNEVQVPKARCFYGFQIAIENIHAEVYSLLIDTYIKDTME 186
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ L RA ET+PCV KKA WAL W D ++ ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 187 KNHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL+FSNELISR+EG+H DFACL+YS L NKL E RV IV+EAV IE EFVCD+LP
Sbjct: 247 GLMPGLSFSNELISRNEGMHTDFACLMYSKLVNKLPESRVHEIVREAVTIEHEFVCDSLP 306
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL +LG K+Y V NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 307 VELIGMNSTLMCQYIEFVADRLLYSLGVPKLYNVKNPFDWMDMISLQGKTNFFEKRVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
KA V + VF +D DF
Sbjct: 367 SKAGVGVA----AEEQVFTLDADF 386
>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
Length = 329
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/327 (66%), Positives = 259/327 (79%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
I EPLL NP RF + PIQ+ IW+MYKKAEASFWT EEVDL +D+ W L DE+ F
Sbjct: 7 IQAEPLLRANPRRFVILPIQHDAIWKMYKKAEASFWTVEEVDLGRDLVDWNKLNKDEQFF 66
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I HVLAFFAASDGIV ENL RFM EVQ+ EAR FYGFQIAIENIHSEMYS L+ETY+ +
Sbjct: 67 IKHVLAFFAASDGIVNENLVERFMTEVQLPEARCFYGFQIAIENIHSEMYSRLIETYVND 126
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
S EK LF A ET+P V +KA+WA+ WI + +F ER++AFA VEGIFFSGSF AIFWL
Sbjct: 127 SAEKDSLFNAIETLPAVRRKAEWAMRWISHDKASFGERVVAFAAVEGIFFSGSFAAIFWL 186
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLH DFACL++S+L+ + S+ERV GI+ +AVEIE++F+ +
Sbjct: 187 KKRGLMPGLTFSNELISRDEGLHTDFACLMFSMLKKRPSKERVTGIIMDAVEIEQDFLTN 246
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALPC L+GMN LM QYIEFV+DRLL ALGC K++ NPFD+ME IS++GKTNFFEKRV
Sbjct: 247 ALPCGLLGMNATLMKQYIEFVSDRLLVALGCEKIFNSENPFDFMESISIEGKTNFFEKRV 306
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEYQKA VM+ + HVF +D DF
Sbjct: 307 GEYQKAGVMA----DKDQHVFTLDADF 329
>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
CBS 112818]
Length = 408
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/335 (67%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W + L DE+ FI
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D + TF++RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFSQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+ I+ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPNAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 408
>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 257/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF + PIQY EIW+MYKKAEASFWTAEEVDLS+D + L E+ F++
Sbjct: 64 DEPLLRENPHRFVILPIQYTEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDHERMFVS 123
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL F +EVQ+ EAR FYGFQIAIENIHSEMYSLL+E+ IK+
Sbjct: 124 HVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDKA 183
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF A ET+PCV KKA WALNWI+ +F ER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 184 EKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL+Y L NK EE V+GI+K+AV IE+EF+ AL
Sbjct: 244 RGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSAL 303
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ALM QYIEFVADRLL AL C KVY NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 304 PVKLIGMNCALMRQYIEFVADRLLVALNCQKVYNAENPFDFMENISLEGKTNFFEKRVGE 363
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VMS + +H F +++ F
Sbjct: 364 YQKSGVMS----DKDSHKFSLEDKF 384
>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
NPV]
Length = 333
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/329 (66%), Positives = 263/329 (79%), Gaps = 5/329 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ +EPLL NP RF MFPI+YP+IW MYKKAEASFWT EEVDLS+D+ W+SL E++
Sbjct: 8 NMSDEPLLQENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDLSDWDSLKESERN 67
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYSLL++TY+K
Sbjct: 68 FIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYVK 127
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
++DEK RLF A ET+P +AKKA+W++ WI + TFAERLIAFA VEGIFFSGSF AIFW
Sbjct: 128 DNDEKRRLFNAIETMPAIAKKAEWSIKWIKSATATFAERLIAFAAVEGIFFSGSFAAIFW 187
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
+KKRGLMPGLTFSNELISRDEGLH DFACL+YS + NK + +R+ I+ EAV IE EFV
Sbjct: 188 MKKRGLMPGLTFSNELISRDEGLHTDFACLMYSHIVNKPTRDRILDIITEAVAIENEFVT 247
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP A++GMN LMS+YIEFVADRLL L + Y NPFD+M LISL+GKTNFFEK+
Sbjct: 248 EALPVAMLGMNNDLMSKYIEFVADRLLLELIGERHYNTKNPFDFMNLISLEGKTNFFEKK 307
Query: 302 VGEYQKASVMSSLNGNG-GNHVFKMDEDF 329
V EYQK VMS GN + +F +D F
Sbjct: 308 VSEYQKYGVMS---GNKLEDDIFTLDAAF 333
>gi|340905392|gb|EGS17760.1| hypothetical protein CTHT_0071060 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 420
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/314 (68%), Positives = 259/314 (82%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP+RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 75 PEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 134
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 135 RYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 194
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK ++ LF A ET+PC+ KKA+WAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 195 IKEPAQRQHLFNAIETIPCIKKKAEWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFASI 254
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+++ ++ ++ I+ +AV+IE+EF
Sbjct: 255 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKHRPPKQVIQDIIVDAVKIEQEF 314
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFE
Sbjct: 315 LTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKVYRVTNPFDFMENISLGGKTNFFE 374
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 375 KRVGDYQKAGVMAS 388
>gi|350423884|ref|XP_003493620.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Bombus impatiens]
Length = 384
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/310 (70%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQ+P+IW+MYKKAEASFWT EEVDLS+D+ W LT+DEKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNHLTSDEKHF 121
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+AIEN+HSEMYS+L++TYI +
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITD 181
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LF A E +PCVAKKA+WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 IKERDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S +RV I+K+AV+IE+EF+ +
Sbjct: 242 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTE 301
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 302 ALPVQMIGMNCTLMCQYIEFVADRLLTELGCEKIYMSENPFDFMEHISLEGKTNFFEKKV 361
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 362 GEYQKWGVMQ 371
>gi|397531941|gb|AFO54480.1| ribonucleotide reductase small subunit p53R2i [Carassius carassius]
Length = 337
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/328 (67%), Positives = 263/328 (80%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ +EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+SL ++EKH
Sbjct: 14 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDSLKSEEKH 73
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 74 FISHVLAFFAASDGIVNENLVQRFSQEVQIPEARSFYGFQILIENVHSEMYSMLINTYIR 133
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E+ LF A T+PCV +KADWAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 134 DLKERDYLFNAIHTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 193
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLM GLT+SNELISRDEGLHC+FACLLYS L K S +RVK I+ +AV IE+EF+
Sbjct: 194 LKKRGLMAGLTYSNELISRDEGLHCNFACLLYSYLVKKPSADRVKDIITKAVSIEQEFLT 253
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN +LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKR
Sbjct: 254 EALPVNLIGMNCSLMKQYIEFVADRLLMDLGLPKVFKSENPFDFMESISLEGKTNFFEKR 313
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N + F +D DF
Sbjct: 314 VGEYQRLGVMS----NVMDCEFTLDADF 337
>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
B05.10]
gi|347828025|emb|CCD43722.1| similar to ribonucleoside-diphosphate reductase small subunit
[Botryotinia fuckeliana]
Length = 407
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/344 (64%), Positives = 266/344 (77%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P +EPLL NP+RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W E L DE
Sbjct: 66 PEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNERLNDDE 125
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 126 RYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 185
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +K+ LF A +T+PC+ KKADWA+ WI D + TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 186 IKEQSQKTYLFNAIDTIPCIKKKADWAVKWIQDKNSTFAQRLVAFAAVEGIFFSGSFASI 245
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L+++ S++ V+ ++ EAVEIE+EF
Sbjct: 246 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLKHRPSKQAVQDVITEAVEIEQEF 305
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y NPFD+ME ISL GKTNFFE
Sbjct: 306 LTEALPCALLGMNSNLMKQYIEFVADRLLLSLGNDKYYKSANPFDFMENISLAGKTNFFE 365
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKMDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 366 KRVGDYQKAGVMAGTQKKHEDTEAQTEAKAENGGD--FNFDEDF 407
>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Oryctolagus cuniculus]
Length = 339
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W LT+DEK+FI+
Sbjct: 19 EEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNRLTSDEKYFIS 78
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 79 HVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 138
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 139 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 198
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 199 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 258
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 259 PVGLIGMNCILMKQYIEFVADRLLMELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 318
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 319 YQRFAVMAETTDN----VFTLDADF 339
>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
Length = 408
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/335 (67%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W + L DE+ FI
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L ++ V+ I+ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPEPSAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEESTEEPENGG--AFRFDEDF 408
>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
Length = 391
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ WE L + EK
Sbjct: 69 PSI--EPLLKDNPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLGDWEKLKSGEK 126
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 127 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 186
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
++ E+ LF A ET+PCV KKADWA+NWI F ER++AFA VEGIFFSGSF +IF
Sbjct: 187 RDPKEREYLFNAIETLPCVKKKADWAMNWISSKHANFGERVVAFAAVEGIFFSGSFASIF 246
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV I++EAV IE+EF+
Sbjct: 247 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFRYLVQKPSKERVLEIIREAVVIEQEFL 306
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP L+GMN LMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 307 TKALPVDLLGMNCELMSQYIEFVADRLLLELGNEKIYNTKNPFSFMEFISLEGKTNFFEK 366
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 367 KVGEYQKWGVMA----NRLDNVFTLDADF 391
>gi|384251438|gb|EIE24916.1| hypothetical protein COCSUDRAFT_47007 [Coccomyxa subellipsoidea
C-169]
Length = 451
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/290 (73%), Positives = 246/290 (84%)
Query: 22 IQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLEN 81
++Y +I+EMYKKA ASFWT EEVDLSQDIR WE L+ DE+HFI HVLAFFAASDGIV+EN
Sbjct: 24 VRYRDIFEMYKKAVASFWTVEEVDLSQDIRDWEKLSDDERHFIMHVLAFFAASDGIVMEN 83
Query: 82 LAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVA 141
LA RFM EVQ+ EARAFYGFQIAIEN+HSEMYSLLLE YI++ ++K ++ RA +TVPCVA
Sbjct: 84 LAVRFMSEVQIPEARAFYGFQIAIENVHSEMYSLLLEHYIRDVEQKDKMLRAIQTVPCVA 143
Query: 142 KKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 201
KKA+WA WI +FAERL+ FACVEGI FSGSFCAIFWLKKR LMPGLTFSNEL+SRD
Sbjct: 144 KKAEWAQRWIGSGSSFAERLVGFACVEGIHFSGSFCAIFWLKKRLLMPGLTFSNELVSRD 203
Query: 202 EGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIE 261
EGLH DFACLLYSLL++ L + V IV+EAV++E EF C+AL CALVGMN LM QYI
Sbjct: 204 EGLHTDFACLLYSLLQHPLDQAVVHRIVREAVDLEHEFCCEALSCALVGMNAQLMGQYIN 263
Query: 262 FVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
+VADRLL ALGC K+Y NPFDWME+ISLQGKTNFFE+RVGEYQ+A VM
Sbjct: 264 YVADRLLVALGCDKLYHTANPFDWMEMISLQGKTNFFERRVGEYQRAGVM 313
>gi|410987580|ref|XP_004000076.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Felis
catus]
Length = 351
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYKKA+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
Length = 397
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/332 (65%), Positives = 264/332 (79%), Gaps = 8/332 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
+EP+LT N RF +FPI+Y EIW+MYKKAEASFW AEE+DLS+D+ W + L DE++FI
Sbjct: 66 DEPILTENKHRFVLFPIKYHEIWQMYKKAEASFWVAEEIDLSKDMHDWSDRLNDDERYFI 125
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TYIK+
Sbjct: 126 SHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGFQIMMENVHSETYSLLIDTYIKDP 185
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D + TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 186 KQRTYLFDAIDTIPCIKKKADWAIRWIEDRNSTFAQRLVAFAAVEGIFFSGSFASIFWLK 245
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL++ L N+ S++ V+ I+ EAV IE+EF+ +A
Sbjct: 246 KRGLMPGLSFSNELISRDEGLHTDFACLLFNHLNNRPSQQAVQDIIVEAVGIEQEFLTEA 305
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL +LG K Y TNPFD+ME ISL GKTNFFEKRVG
Sbjct: 306 LPCALLGMNSKLMKQYIEFVADRLLLSLGNPKFYNATNPFDFMESISLAGKTNFFEKRVG 365
Query: 304 EYQKASVMSSLN------GNGGNHVFKMDEDF 329
+YQKA VM+S N G V + DEDF
Sbjct: 366 DYQKAGVMASTQKKTEEPTNNGEGVIRFDEDF 397
>gi|380485558|emb|CCF39283.1| ribonucleoside-diphosphate reductase small subunit [Colletotrichum
higginsianum]
Length = 413
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/345 (65%), Positives = 269/345 (77%), Gaps = 19/345 (5%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
PSI E EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + +
Sbjct: 71 PSIKEQELDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKI 130
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DEK+FI+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL
Sbjct: 131 NEDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLL 190
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK +++ LF A +T+PC+ KKADWAL WI D +FA+RL+AFA VEGIFFSG+
Sbjct: 191 IDTYIKEPAQRTYLFNAIDTIPCIRKKADWALKWINDEKSSFAQRLVAFAAVEGIFFSGA 250
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+N+ S++ ++ I+ +AV+I
Sbjct: 251 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNRPSKQVIEDIIVDAVKI 310
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY +NPFD+ME ISL GKT
Sbjct: 311 EQEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYKSSNPFDFMENISLGGKT 370
Query: 296 NFFEKRVGEYQKASVMSSLNG-----------NGGNHVFKMDEDF 329
NFFEKRV +YQKA VM+S NGG+ VF DEDF
Sbjct: 371 NFFEKRVADYQKAGVMNSTKKAQEEPTEGKGENGGDFVF--DEDF 413
>gi|367026740|ref|XP_003662654.1| hypothetical protein MYCTH_68292 [Myceliophthora thermophila ATCC
42464]
gi|347009923|gb|AEO57409.1| hypothetical protein MYCTH_68292 [Myceliophthora thermophila ATCC
42464]
Length = 414
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/342 (65%), Positives = 265/342 (77%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 75 PEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 134
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K+FI+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 135 KYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTY 194
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK ++S LF A ET+P + KKADWAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 195 IKEPAQRSHLFNAIETIPAIRKKADWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFASI 254
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L ++ S++ ++ I+ +AV IE+EF
Sbjct: 255 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPSKQVIEDIIVDAVRIEQEF 314
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 315 LTEALPCALLGMNANLMKQYIEFVADRLLLALGNEKVYRSTNPFDFMENISLGGKTNFFE 374
Query: 300 KRVGEYQKASVMSSLNG------------NGGNHVFKMDEDF 329
KRVG+YQKA VM+S NGG+ F D+DF
Sbjct: 375 KRVGDYQKAGVMASTKKFVQEDSDEPKGENGGD--FTFDDDF 414
>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
CBS 513.88]
gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
gi|350639699|gb|EHA28053.1| hypothetical protein ASPNIDRAFT_56635 [Aspergillus niger ATCC 1015]
Length = 396
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/342 (66%), Positives = 264/342 (77%), Gaps = 18/342 (5%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
P I E EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L
Sbjct: 59 PGIKEMEASEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRL 118
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DE++FI+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL
Sbjct: 119 NDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLL 178
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK +++ LF A +T+PC+AKKADWA+ WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 179 IDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLVAFAAVEGIFFSGS 238
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ I+ EAV I
Sbjct: 239 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGI 298
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ DALP AL+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKT
Sbjct: 299 EQEFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKT 358
Query: 296 NFFEKRVGEYQKASVMSS--------LNGNGGNHVFKMDEDF 329
NFFEKRVG+YQKA VM+S N NG DEDF
Sbjct: 359 NFFEKRVGDYQKAGVMASTKKEEEVKTNSNG----LSFDEDF 396
>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
Length = 409
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/337 (66%), Positives = 264/337 (78%), Gaps = 15/337 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + + DEK+FI
Sbjct: 75 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 135 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+P + KKADWAL WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 195 AQRTHLFNAIDTIPAIRKKADWALRWITDQKSTFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ ++ I+ +AV IE+EF+ +A
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQIIEDIIVDAVRIEQEFLTEA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRVG
Sbjct: 315 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYRSTNPFDFMENISLGGKTNFFEKRVG 374
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKMDEDF 329
EYQKA VM+S NGG+ F D+DF
Sbjct: 375 EYQKAGVMASTKKPQEDVEEAKGENGGD--FTFDDDF 409
>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 253/325 (77%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YKKAE+S WT E + L D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVENIYLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
hutchinsonii ATCC 33406]
gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 324
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/328 (67%), Positives = 262/328 (79%), Gaps = 6/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ EEPLL N +RF +FPI++ +IW MYK+ EASFWTAEE+DLSQD+ W +L E+H
Sbjct: 2 SLLEEPLLKENKNRFVLFPIKHDDIWAMYKQEEASFWTAEEIDLSQDLIDWANLNDGERH 61
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENLA F+++VQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 62 FISHVLAFFAASDGIVNENLAVNFLEKVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIK 121
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK RLF A +TVPCV KKADWAL +ID +F E +IAFA VEGIFFSGSFC++FWL
Sbjct: 122 DPKEKDRLFNAIDTVPCVKKKADWALRFIDNG-SFIENIIAFAAVEGIFFSGSFCSVFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVC 241
KKRGLMPGL+FSNELISRDEGLHCDFACLLY+ + NKL ERV I+ EAVEIE+EFV
Sbjct: 181 KKRGLMPGLSFSNELISRDEGLHCDFACLLYTKYINNKLPAERVIQIILEAVEIEKEFVT 240
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
D+LP L+GMN LM QYIEFVADRLL ALG K + TNPFD+ME+ISLQGKTNFFEKR
Sbjct: 241 DSLPVDLIGMNARLMQQYIEFVADRLLVALGVPKQFNATNPFDFMEMISLQGKTNFFEKR 300
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V EYQK+ VM+ + F +DEDF
Sbjct: 301 VSEYQKSGVMAEKDSQK----FSLDEDF 324
>gi|358333482|dbj|GAA27391.2| ribonucleoside-diphosphate reductase subunit M2 [Clonorchis
sinensis]
Length = 492
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 257/329 (78%), Gaps = 2/329 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + EPLL PNP RF +FPIQY ++W+ YKKA ASFWT EEVDLS+D W SL E+
Sbjct: 165 PELELEPLLKPNPHRFVLFPIQYHDVWQFYKKAVASFWTVEEVDLSKDFSDWNSLKVGER 224
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI++VLAFFAASDGIVLENL RF +EVQV E R FYG QIAIENIHSEMYSLL++TYI
Sbjct: 225 HFISYVLAFFAASDGIVLENLVERFSQEVQVPEVRCFYGMQIAIENIHSEMYSLLIDTYI 284
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A + CVA+KA WALNWI D TFAER++AFA VEGIFFSGSF AIF
Sbjct: 285 KDPTERDFLFNAISNLECVAQKAQWALNWIGDTHSTFAERIVAFAAVEGIFFSGSFAAIF 344
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY + K +++RV I+KEAVEIE++F+
Sbjct: 345 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKYIVQKPAKDRVLAIIKEAVEIEQKFL 404
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP +L+GMN LM +YIEF+ADRLL LG K YG NPFD+ME ISL+GKTNFFEK
Sbjct: 405 SDALPVSLIGMNCKLMCRYIEFIADRLLVELGHEKHYGSDNPFDFMENISLEGKTNFFEK 464
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVG+YQ+A VMS G H F D DF
Sbjct: 465 RVGDYQRAGVMSRARGE-ETHKFTTDADF 492
>gi|375148687|ref|YP_005011128.1| ribonucleoside-diphosphate reductase [Niastella koreensis GR20-10]
gi|361062733|gb|AEW01725.1| Ribonucleoside-diphosphate reductase [Niastella koreensis GR20-10]
Length = 323
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/323 (67%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N DRF + PI+YP IWEMYKK EASFWTAEE+DLS D++ W SL E+HFI+H
Sbjct: 6 EVLLQENKDRFVILPIKYPTIWEMYKKHEASFWTAEEIDLSGDLKDWASLNDGERHFISH 65
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA FM EVQ+ EAR FYGFQI +ENIHSE Y+LL++TY+K+ +E
Sbjct: 66 VLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYVKDVNE 125
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K RLF A +TVP V KKA+WAL WI+ FAERL+AFA VEGIFFSGSFC+IFW+KKRG
Sbjct: 126 KDRLFHAIDTVPAVKKKAEWALRWIEQG-NFAERLVAFAAVEGIFFSGSFCSIFWMKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHC+FACLLYS+L KL++E+V I+ +AV IE+EF+ +ALP
Sbjct: 185 LMPGLTFSNELISRDEGLHCEFACLLYSMLNAKLTQEQVFNIIGDAVRIEKEFITEALPV 244
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEFVADR L LG K++ TNPFD+ME+ISLQGKTNFFEKRVG+Y+
Sbjct: 245 DLIGMNARLMQQYIEFVADRWLSELGYPKMFNATNPFDFMEMISLQGKTNFFEKRVGDYR 304
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA V N + + F +DEDF
Sbjct: 305 KAGV----NASKESQQFSLDEDF 323
>gi|404450556|ref|ZP_11015537.1| ribonucleotide reductase subunit beta [Indibacter alkaliphilus LW1]
gi|403763776|gb|EJZ24719.1| ribonucleotide reductase subunit beta [Indibacter alkaliphilus LW1]
Length = 326
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 261/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N RF +FPIQ+ +IW+ YKKAEASFWTAEE+DLSQD++ W++L E+HFI+H
Sbjct: 5 EPILQENSGRFVLFPIQHDDIWQYYKKAEASFWTAEEIDLSQDLKDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK++ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDNVE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ +L A E + CV KKADWAL WID TF ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKADWALRWIDNG-TFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ + N L +E V I+K AVEIE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTKHVNNTLPKETVTEIIKNAVEIEKEFVTDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC KV+ TNPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELGCSKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM+S + + F M E+F
Sbjct: 304 QKAGVMNSKDKSDSPK-FSMGEEF 326
>gi|397531943|gb|AFO54481.1| ribonucleotide reductase small subunit p53R2ii [Carassius
carassius]
Length = 349
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 262/328 (79%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ +EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+SL ++EKH
Sbjct: 26 SVEDEPLLKENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDSLKSEEKH 85
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQIPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E+ LF A T+P V +KADWAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDFLFNAIHTMPFVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RVK I+ +AV IE+EF+
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFACLMYSYLVKKPSADRVKDIITKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN +LM QYIEFVADRLL LG KVY NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKVYKSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V EYQ+ VMS N + F +D DF
Sbjct: 326 VAEYQRLGVMS----NVMDCEFTLDADF 349
>gi|297209|emb|CAA48969.1| C8L [Variola virus]
gi|745144|prf||2015436AF C8L gene
Length = 333
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 257/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M Y+EFVADRL+ LG ++Y VTNP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|409049897|gb|EKM59374.1| hypothetical protein PHACADRAFT_249824 [Phanerochaete carnosa
HHB-10118-sp]
Length = 416
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/334 (66%), Positives = 260/334 (77%), Gaps = 8/334 (2%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
+PE EPLL + RF +FPIQYPEIW+MYKKAEASFWTAEE+DLS+DI W + L E
Sbjct: 83 LPEHMEPLLMESKRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDIHDWTNRLNDKE 142
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 143 RYFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 202
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF A ET+PC+ KKADWAL WI D +FAERL+AFA VEGIFFSGSF +I
Sbjct: 203 IKDPKQREHLFDAIETIPCIKKKADWALRWISDTKSSFAERLVAFAAVEGIFFSGSFASI 262
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E V+ IV EAV IE+EF
Sbjct: 263 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRKIVAEAVAIEQEF 322
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALP AL+GMN LM QYIEFVADRLL ALG KVY TNPFD+M++ISLQGKTNFFE
Sbjct: 323 LTDALPVALIGMNAKLMCQYIEFVADRLLVALGDEKVYNATNPFDFMDMISLQGKTNFFE 382
Query: 300 KRVGEYQKASVMSSLNGN----GGNHVFKMDEDF 329
KRV +Y KA V +S + F +DEDF
Sbjct: 383 KRVSDYSKAGVNTSAQSTTSEVSSSKTFTLDEDF 416
>gi|440637324|gb|ELR07243.1| ribonucleoside-diphosphate reductase small subunit [Geomyces
destructans 20631-21]
Length = 412
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/344 (64%), Positives = 264/344 (76%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP+RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 71 PEEADEPLLQSNPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 130
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TY
Sbjct: 131 RYFISHVLAFFAASDGIVNENLLERFSSEVQIPEARCFYGFQIMIENIHAETYSLLIDTY 190
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A ET+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 191 IKEQAQRTYLFNAIETIPCIKKKADWAVRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASI 250
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S LR++ S++ V+ ++ EAV IE+EF
Sbjct: 251 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLRHRPSKQAVQDVITEAVSIEQEF 310
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y TNPFD+ME ISL GKTNFFE
Sbjct: 311 LTEALPCALLGMNANLMKQYIEFVADRLLLSLGNEKYYKATNPFDFMENISLAGKTNFFE 370
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKMDEDF 329
KRV +YQK VM+S NGG+ F DEDF
Sbjct: 371 KRVADYQKTGVMASTTKKHEDTAAQIESKAENGGD--FNFDEDF 412
>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/328 (67%), Positives = 258/328 (78%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EPLL NP RF +FPIQ E+W+MYKKAEA FWTAEE+DL+ D + WE LT DE+H
Sbjct: 57 TLKPEPLLVENPGRFVLFPIQDNEVWQMYKKAEACFWTAEELDLAHDHKDWEGLTDDERH 116
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFAASDGIV ENLA+ F E+Q+SEAR FYGFQIAIENIHSE+YSLL++TY+K
Sbjct: 117 FVKHVLAFFAASDGIVNENLASNFSSEIQLSEARCFYGFQIAIENIHSEVYSLLIDTYVK 176
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFW 181
++ EK+ LF A ETVPCV +KA WAL W D ++AERL+AFA VEGIFFSGSFCA+FW
Sbjct: 177 DAAEKTHLFNAMETVPCVRRKARWALRWCDPKLASYAERLVAFAAVEGIFFSGSFCAVFW 236
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGL FSNELISRDEGLH DFACLL+ L NKL ERV I+ +AV+IE+EF+
Sbjct: 237 LKKRGLMPGLCFSNELISRDEGLHTDFACLLFRKLVNKLPVERVAEIICDAVDIEKEFIT 296
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
ALP L+GMN ALM QYIEF ADRLL LGC K Y TNPFDWME+ISLQGKTNFFEKR
Sbjct: 297 SALPVELIGMNSALMRQYIEFCADRLLMELGCEKKYNSTNPFDWMEMISLQGKTNFFEKR 356
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEY K+ V + + F ++ DF
Sbjct: 357 VGEYSKSGV----GVDAADQEFTLEADF 380
>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
gi|81885688|sp|Q6PEE3.1|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
Length = 351
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLLG LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
Length = 336
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 16 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 76 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 136 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 195
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 196 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 256 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 316 YQRFAVMAETTDN----VFTLDADF 336
>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
Length = 399
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/336 (64%), Positives = 268/336 (79%), Gaps = 14/336 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + LT+DE++FI
Sbjct: 66 DEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQYFI 125
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 126 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKDP 185
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D + TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 186 AQRTYLFNAVDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFSGAFASIFWLK 245
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S L+ + S++ ++ I+ +AV IE+EF+ +A
Sbjct: 246 KRGLMPGLSFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVSIEQEFLTEA 305
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 306 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKSTNPFDFMENISLGGKTNFFEKRVA 365
Query: 304 EYQKASVMSSLNG----------NGGNHVFKMDEDF 329
+YQKA V+ S N NGG+ F D+DF
Sbjct: 366 DYQKAGVLHSANKKDEEEAPKGENGGD--FTFDDDF 399
>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
Length = 393
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W LT +E+
Sbjct: 71 PSL--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ E+ LF A ET+P V +KADWAL+WI + F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPQERDYLFNAVETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA +++ L + S ER+ I+ +AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVMMFRHLVQRPSRERIIEIISDAVTIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN ALMSQYIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCALMSQYIEFVADRLLVELGVGKIYNTKNPFTFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVTS----NRLDNVFTLDADF 393
>gi|75076588|sp|Q4R741.1|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
gi|355698140|gb|EHH28688.1| Ribonucleoside-diphosphate reductase subunit M2 B [Macaca mulatta]
gi|355779870|gb|EHH64346.1| Ribonucleoside-diphosphate reductase subunit M2 B [Macaca
fascicularis]
gi|380788457|gb|AFE66104.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Macaca
mulatta]
gi|383418729|gb|AFH32578.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Macaca
mulatta]
Length = 351
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica CLIB122]
Length = 403
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/331 (67%), Positives = 261/331 (78%), Gaps = 4/331 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEK 61
S +EPLL N RF +FPIQY EIW+MYKKAEASFWTAEE+DL +D+ WE+ L DE+
Sbjct: 73 SEKDEPLLKENHRRFVLFPIQYHEIWQMYKKAEASFWTAEEIDLGKDMGDWENRLNNDER 132
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
FI+HVLAFFAASDGIV ENL RF EVQ EA+ FYGFQI +ENIHSE YSLL++TYI
Sbjct: 133 FFISHVLAFFAASDGIVNENLVERFSGEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYI 192
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E++ LF A ET+PC+ KKADWAL WI D TF ERLIAFA VEGIFFSGSF +IF
Sbjct: 193 KDPKERTYLFNAIETIPCIKKKADWALKWISDEESTFGERLIAFAAVEGIFFSGSFASIF 252
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ ++ EAV IE+EF+
Sbjct: 253 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLENRPSKKIVEDVIVEAVGIEQEFL 312
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALPC L+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEK
Sbjct: 313 TDALPCGLLGMNAKLMCQYIEFVADRLLVALGNSKVYNSTNPFDFMENISLAGKTNFFEK 372
Query: 301 RVGEYQKASVMSSLNG--NGGNHVFKMDEDF 329
RV +YQKA VM++ N ++ F +DEDF
Sbjct: 373 RVSDYQKAGVMANSNQEEKSNSNGFSLDEDF 403
>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Bos taurus]
gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Bos
taurus]
gi|296480530|tpg|DAA22645.1| TPA: ribonucleotide reductase M2 polypeptide-like [Bos taurus]
Length = 351
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYKKA+ASFWTAEEVDLS+D+ W L ++EK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
Length = 401
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/335 (66%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EEPLL NP RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W L DE++FI
Sbjct: 69 EEPLLQENPQRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDDERYFI 128
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 129 SRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 188
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A + +PC+ KKADWA+ WI D TFA+RLIAFA VEGIFFSGSF +IFWLK
Sbjct: 189 KQRTYLFEALDNIPCIRKKADWAIRWIQDKDSTFAQRLIAFAAVEGIFFSGSFASIFWLK 248
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S +R++ + V+ I+ EAVEIE+EF+ DA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHIRHRPTPAAVEAIITEAVEIEKEFLTDA 308
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 309 LPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYHATNPFDFMDNISLAGKTNFFEKRVG 368
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F DEDF
Sbjct: 369 DYQKAGVMASTQKKDDTEEAIENGG--AFNFDEDF 401
>gi|73974198|ref|XP_539109.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Canis lupus familiaris]
Length = 351
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
Length = 391
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D W LT +E+
Sbjct: 69 PSI--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDATDWARLTDNER 126
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 127 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 186
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+ E+ LF A ET+P V +KADWA++WI S FAER+IAFA VEGIFFSGSF +IF
Sbjct: 187 REPQERDYLFNAIETMPAVKRKADWAMSWISSKSANFAERIIAFAAVEGIFFSGSFASIF 246
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L+Y L + ER+ I+++AVEIE+EF+
Sbjct: 247 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMYHHLVQRPKRERIIEIIRDAVEIEQEFL 306
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LMSQYIEFVADRLLG LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 307 TEALPVNLIGMNCVLMSQYIEFVADRLLGELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 366
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+V EYQ+ V++S N VF +D DF
Sbjct: 367 KVAEYQRMGVVTSRLDN----VFTLDADF 391
>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
Length = 398
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/329 (67%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ WE L + EK
Sbjct: 76 PSI--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWEKLKSGEK 133
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV NL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 134 HFISHVLAFFAASDGIVNVNLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 193
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
++S E+ LF A + +PCV KKADWALNWI + F ER++AFA VEGIFFSG+F +IF
Sbjct: 194 RDSKEREYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGTFASIF 253
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV I++EAV IE+EF+
Sbjct: 254 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFL 313
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP L+GMN LMSQYIEF ADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 314 TKALPVDLLGMNCELMSQYIEFEADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEK 373
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 374 KVGEYQKWGVMA----NRQDNVFTLDADF 398
>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
mansoni]
gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
[Schistosoma mansoni]
Length = 365
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 257/324 (79%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL PNP RF +FPI+Y ++W YKKA ASFWT EEVDLS+D WESL E+HFI++
Sbjct: 43 EPLLKPNPHRFVLFPIEYHDVWHFYKKAVASFWTVEEVDLSKDFIHWESLKVGERHFISY 102
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENL RF +EVQ+ E R FYG QIAIENIHSEMYSLL++TYIK+S E
Sbjct: 103 VLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKE 162
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A + CVAKKA WAL+WI D TFAERL+AFA VEG+FFSGSF AIFWLKKR
Sbjct: 163 RDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAERLVAFAAVEGVFFSGSFAAIFWLKKR 222
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL+FSNELISRDEGLHCDFACLL+ + K +ERV+ I++EAV IE+EF+ +ALP
Sbjct: 223 GLMPGLSFSNELISRDEGLHCDFACLLFKHIIKKPPKERVESIIREAVLIEQEFLSEALP 282
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYIEF+ADRLL LG K+Y NPFD+ME IS++GKTNFFEKRVGEY
Sbjct: 283 VSLIGMNCKLMCQYIEFIADRLLVELGYEKMYHSDNPFDFMENISIEGKTNFFEKRVGEY 342
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q+A VMS G H F +DEDF
Sbjct: 343 QRAGVMSRARGE-STHNFSVDEDF 365
>gi|392969753|ref|ZP_10335168.1| Ribonucleoside-diphosphate reductase [Fibrisoma limi BUZ 3]
gi|387841947|emb|CCH57226.1| Ribonucleoside-diphosphate reductase [Fibrisoma limi BUZ 3]
Length = 330
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/324 (66%), Positives = 264/324 (81%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + RF +FPI++ +IW+MYKK EASFWTAEE+DLSQD++ W++L E+HFI+H
Sbjct: 8 EPILEEDKGRFVLFPIKHNDIWQMYKKHEASFWTAEEIDLSQDLKDWDNLNDGERHFISH 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQ+ +ENIHSE YSLL++TYIK+ E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K R+ A +T+PCV KKA+WAL WI+ +FAERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 128 KDRMLNAIDTIPCVQKKAEWALRWIENG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKRG 186
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGL+FSNELISRDEGLH DFACLLY+ ++NK+ EE + IV++AV IE+EFV DALP
Sbjct: 187 LMPGLSFSNELISRDEGLHRDFACLLYTDHIKNKMPEEEIYQIVRDAVTIEQEFVSDALP 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYI FVAD LL +LG +Y V+NPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 247 VSLIGMNADLMKQYIAFVADHLLVSLGLRAIYNVSNPFDFMDMISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM+S++ F M+EDF
Sbjct: 307 QKAGVMASVDKERETAKFSMEEDF 330
>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
Length = 328
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 259/324 (79%), Gaps = 6/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL +P RF +FPI++ +IWE YKKAEASFWTAEE+DLSQD + W SL E+HFI+H
Sbjct: 10 EPLLMDDPTRFVIFPIKHNDIWEFYKKAEASFWTAEELDLSQDHKDWASLNDGERHFISH 69
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ VQ +EA+ FYGFQI IENIH+E YSLL++TYIK++ E
Sbjct: 70 VLAFFAASDGIVNENLAVGFLSNVQYAEAKCFYGFQIMIENIHAETYSLLIDTYIKDTTE 129
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ R+ A ET+PCV KKADWA+ WI+ TF ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 RQRMLNAIETIPCVKKKADWAIRWIEQG-TFIERLIAFAAVEGIFFSGSFCSIFWLKKRG 188
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY+ + NKL EE+V I+K+AVEIE+EFV DALP
Sbjct: 189 LMPGLTFSNELISRDEGLHRDFACLLYTKYIVNKLPEEQVYTIIKDAVEIEKEFVSDALP 248
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN M QYIEFVAD LL +L KVY TNPFD+M+LISLQGKTNFFEKRVGEY
Sbjct: 249 VSLIGMNAPQMCQYIEFVADHLLESLNLKKVYNATNPFDFMDLISLQGKTNFFEKRVGEY 308
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V + + F +DEDF
Sbjct: 309 QKAGVTADKDKMN----FSLDEDF 328
>gi|390945295|ref|YP_006409056.1| ribonucleotide reductase subunit beta [Belliella baltica DSM 15883]
gi|390418723|gb|AFL86301.1| ribonucleotide reductase, beta subunit [Belliella baltica DSM
15883]
Length = 326
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 263/324 (81%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N +RF +FPIQ+ +IW+ YKKAEASFWTAEE+DLSQD+ W++L E+HFI+H
Sbjct: 5 EPILQENKNRFVLFPIQHNDIWQYYKKAEASFWTAEEIDLSQDLSDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK++ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDNQE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ +L A E + CV KKA+WAL WID +F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ ++N+L +E V I+K+AVEIE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTEHVKNQLPKETVAMIIKDAVEIEKEFVTDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC KV+ TNPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VRLIGMNSDLMCQYIEFVADRLLMELGCEKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM S N + F + EDF
Sbjct: 304 QKAGVMKS-NEINESPKFSIGEDF 326
>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
Length = 355
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/306 (70%), Positives = 257/306 (83%), Gaps = 1/306 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L +E+
Sbjct: 48 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 107
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 108 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 167
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 168 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 227
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+
Sbjct: 228 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 287
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG GKV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 288 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 347
Query: 301 RVGEYQ 306
RVGE +
Sbjct: 348 RVGEIR 353
>gi|340059497|emb|CCC53882.1| putative ribonucleoside-diphosphate reductase small chain,
fragment, partial [Trypanosoma vivax Y486]
Length = 323
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 264/324 (81%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL PNPDR+ +FPI+Y +IW YK+AE+S WT EE+DLS D+ W+ + +E+HFI H
Sbjct: 4 EPLLLPNPDRYVIFPIKYHDIWRKYKEAESSIWTVEEIDLSNDLADWKKIDDNERHFIKH 63
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA RFM EVQ+ EAR FYGFQIAIEN+H+E YS+LL+TYI + DE
Sbjct: 64 VLAFFAASDGIVLENLAQRFMAEVQIPEARCFYGFQIAIENVHAETYSVLLDTYILDPDE 123
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ L RA T+P + KKA+WA+ WI+ + +FAERL+AFA VEGIFFSGSFCA+FWLKKRG
Sbjct: 124 KNHLLRAIFTIPSIKKKAEWAIQWIESTASFAERLVAFAAVEGIFFSGSFCALFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH +FACLLY + N+L++ERV+ I+ AV+IEREF+C+++P
Sbjct: 184 LMPGLTFSNELISRDEGLHTEFACLLYEKYIVNRLTDERVREIICGAVDIEREFICESIP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM++YI+FVADRLL ALG +VY V NPFD+ME+ISLQGKTNFFEK+VGEY
Sbjct: 244 VHMIGMNSDLMTKYIKFVADRLLVALGHERVYNVENPFDFMEMISLQGKTNFFEKKVGEY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q+A VM++ F + EDF
Sbjct: 304 QRAGVMNA----DAPKAFSLSEDF 323
>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
laibachii Nc14]
Length = 1611
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 250/318 (78%), Gaps = 1/318 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP L NP+RF +FPIQ EIW+MYKKAEASFWTAEE+DL D+ W +++ +E+HFI H
Sbjct: 70 EPFLRENPNRFVLFPIQQSEIWDMYKKAEASFWTAEEIDLVHDMNDWLNISDNERHFIKH 129
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F EVQ+ EAR FYGFQIAIENIHSE+YSLL++TYIK+ E
Sbjct: 130 VLAFFAASDGIVNENLAMNFSSEVQIPEARCFYGFQIAIENIHSEVYSLLIDTYIKDPTE 189
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K L A ET+PCV KA WAL W D +FAER++AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 190 KQHLLCAIETIPCVTNKAQWALKWCDPKCASFAERVVAFAAVEGIFFSGSFCSIFWLKKR 249
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLHCDFACL+YS L NKL E + I+ +AV IE+EFV D+LP
Sbjct: 250 GLMPGLCFSNELISRDEGLHCDFACLMYSKLVNKLPEASIHAIISDAVVIEQEFVRDSLP 309
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL ALG K+Y +NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 310 VELIGMNSSLMGQYIEFVADRLLHALGVSKLYHTSNPFDWMDMISLQGKTNFFEKRVGEY 369
Query: 306 QKASVMSSLNGNGGNHVF 323
K+ + GG VF
Sbjct: 370 AKSGTILGAIVLGGVVVF 387
>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
gi|75041724|sp|Q5R9G0.1|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
Length = 351
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|406867406|gb|EKD20444.1| ribonucleotide reductase small subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 414
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/344 (64%), Positives = 264/344 (76%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 73 PEEADEPLLRENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 132
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 133 RYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTY 192
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +K+ LF A +T+PC+ KKADWA+ WI D + TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 193 IKEQSQKTYLFNAIDTIPCIKKKADWAVKWIEDKNSTFAQRLVAFAAVEGIFFSGSFASI 252
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L ++ S++ V+ ++ EAVEIE+EF
Sbjct: 253 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLNHRPSKQAVQDVITEAVEIEQEF 312
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y NPFD+ME ISL GKTNFFE
Sbjct: 313 LTEALPCALLGMNANLMKQYIEFVADRLLLSLGNEKFYKSANPFDFMENISLAGKTNFFE 372
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKMDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 373 KRVGDYQKAGVMAGTQKKHEDTAAQTDAKAENGGD--FNFDEDF 414
>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
sapiens]
gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Pan troglodytes]
gi|74727333|sp|Q7LG56.1|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
sapiens]
gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
sapiens]
gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
construct]
gi|410253810|gb|JAA14872.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410292306|gb|JAA24753.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410350059|gb|JAA41633.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410350061|gb|JAA41634.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
Length = 351
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 253/325 (77%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YK+AE+S WT EE+DL D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIH E YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHCETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHCNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|342870144|gb|EGU73441.1| hypothetical protein FOXB_16079 [Fusarium oxysporum Fo5176]
Length = 409
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/337 (65%), Positives = 264/337 (78%), Gaps = 15/337 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + LTADE+ F+
Sbjct: 75 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTADEQFFV 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 135 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A ET+PC+ KKADWA+ WI D +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 195 AQRTYLFNAIETIPCIRKKADWAIRWIQDKDSSFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ ++ I+ +AV IE+EF+ +A
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVTIEQEFLTEA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPCALLGMNSDLMKQYIEFVADRLLVALGNEKVYKATNPFDFMENISLGGKTNFFEKRVA 374
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKMDEDF 329
+YQKA V+ S NGG+ F DEDF
Sbjct: 375 DYQKAGVLHSATKKTEEDESPKGENGGD--FTFDEDF 409
>gi|402878875|ref|XP_003903089.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Papio anubis]
Length = 351
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
gi|464615|sp|P33799.1|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 319
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 257/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M Y+EFVADRL+ LG ++Y VTNP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
anisopliae ARSEF 23]
Length = 414
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DEK+FI
Sbjct: 80 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKYFI 139
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK +
Sbjct: 140 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEN 199
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 200 AQRTYLFNAIDTIPCIRKKADWAIRWIQDKESTFAQRLVAFAAVEGIFFSGAFASIFWLK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+N+ S++ + I+ +AV IE+EF+ +A
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKQVIYDIITDAVAIEQEFLTEA 319
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY +NPFD+ME ISL GKTNFFEKRVG
Sbjct: 320 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKTSNPFDFMENISLGGKTNFFEKRVG 379
Query: 304 EYQKASVMSS 313
+YQKA V++S
Sbjct: 380 DYQKAGVLAS 389
>gi|440903111|gb|ELR53814.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial [Bos
grunniens mutus]
Length = 336
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYKKA+ASFWTAEEVDLS+D+ W L + EK+FI+
Sbjct: 16 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSGEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 76 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 136 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 195
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 196 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 256 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 316 YQRFAVMAETTDN----VFTLDADF 336
>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Sus scrofa]
Length = 351
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNRLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 QREFLFNAIETMPYVKKKADWALRWIADRKATFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE RV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEARVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
Length = 326
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 261/327 (79%), Gaps = 2/327 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EP+L+ N +RF +FPIQ+ +IWE YKKAEASFWTAEE+DL QD+ W+SL E+HF
Sbjct: 1 MQQEPILSENKNRFVLFPIQHADIWEYYKKAEASFWTAEEIDLGQDMVDWKSLNDGERHF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK+
Sbjct: 61 ISHVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKD 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ +LF A E + CV KKADWAL WID F ERLIAFA VEGIFFSGSFC+IFWLK
Sbjct: 121 PSERDKLFNAIEHIDCVKKKADWALRWIDNG-NFQERLIAFAAVEGIFFSGSFCSIFWLK 179
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCD 242
KRGLMPGLTFSNELISRDEGLHCDFAC LY+ + N L +E V+ I+ +AV+IE+EFV D
Sbjct: 180 KRGLMPGLTFSNELISRDEGLHCDFACHLYTKHVVNPLPKETVREIIIDAVKIEKEFVTD 239
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRLL L C KV+ TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 240 ALPVRLIGMNSDLMCQYIEFVADRLLLELDCEKVWNSTNPFDFMDMISLQGKTNFFEKRV 299
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
G+YQKA VM S + + F + EDF
Sbjct: 300 GDYQKAGVMKSADSSDSKPRFSIGEDF 326
>gi|380024292|ref|XP_003695935.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2-like [Apis florea]
Length = 383
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/310 (70%), Positives = 256/310 (82%), Gaps = 3/310 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQ+P+IW+MYKKAEASFWT EEVDLS+D+ W +LTA EKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNNLTASEKHF 121
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQ+A+EN+HSEMYSLL++TYI +
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIAD 181
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E LF A E +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 AKE-DFLFNAIENLPCVAKKAHWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 240
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S ERV I+K+AV+IE+EF+ D
Sbjct: 241 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCERVTSIIKDAVKIEQEFLTD 300
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LGC K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 301 ALPVEMIGMNCKLMCQYIEFVADRLLVELGCKKIYMSENPFDFMEHISLEGKTNFFEKKV 360
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 361 GEYQKWGVMQ 370
>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
dendrobatidis JAM81]
Length = 336
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 259/328 (78%), Gaps = 5/328 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
+ EP+LTP+P R +FPI+YP +W MYKKAEASFWTAEEVDLS+D WE LT DE++
Sbjct: 12 VQNEPILTPDPRRSVLFPIKYPAVWRMYKKAEASFWTAEEVDLSKDTLDWEERLTDDERY 71
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+ VLAFFAASDGIV ENL RF ++V + EAR FY FQI IENIHSEMYSLL++TYIK
Sbjct: 72 FISRVLAFFAASDGIVNENLVERFSQDVHIPEARYFYDFQIMIENIHSEMYSLLIDTYIK 131
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E++ LF A +TVPC+ KKADWAL WI D +F ERL+AFA VEGIFFSGSF +IFW
Sbjct: 132 DRKERAFLFDAIDTVPCIRKKADWALRWISDKKSSFGERLVAFAAVEGIFFSGSFASIFW 191
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLH DFACLL++LL NK ++ ++ I+ EAV IE+EF
Sbjct: 192 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFTLLNNKPTDSVIQQIIHEAVTIEQEFST 251
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
++LP AL+GMN LM QYIEFVADRL LG K YGV NPFD+M++ISLQGKTNFFEKR
Sbjct: 252 ESLPVALIGMNANLMKQYIEFVADRLFIELGMPKKYGVGNPFDFMDMISLQGKTNFFEKR 311
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQK+ VM N N + F ++ DF
Sbjct: 312 VGEYQKSGVM---NTNASSKEFTIEADF 336
>gi|391328598|ref|XP_003738774.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Metaseiulus occidentalis]
Length = 374
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/327 (65%), Positives = 260/327 (79%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ EPLL NP+RF +FPI+YP+IW MYKKA+ASFWTAEEVDL +D+ W +++ E+ F
Sbjct: 52 VESEPLLRENPNRFVLFPIEYPDIWRMYKKAQASFWTAEEVDLGKDMADWHKMSSQEQEF 111
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENL RF +EVQV+EAR FYGFQ+ +ENIHSEMYSLLL TYI +
Sbjct: 112 IKHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVMMENIHSEMYSLLLNTYITD 171
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LFRA ET+PC+ KKADWALNWI + + T+ ER++AFA VEGIFFSG+F +IFWL
Sbjct: 172 PMERDHLFRAIETMPCIKKKADWALNWIGNQNATYGERVVAFAAVEGIFFSGAFASIFWL 231
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLH DFACL++ L K S ER+ I++ AV IE+EF+ +
Sbjct: 232 KKRGLMPGLTFSNELISRDEGLHTDFACLMFRHLVQKPSVERIYEIIRNAVAIEQEFLTE 291
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALPCA++GMN LM QYIEFVADRLL L C K++ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 292 ALPCAMLGMNCDLMKQYIEFVADRLLVELECDKLWNSQNPFDFMEQISLEGKTNFFEKRV 351
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
GEYQKA VM+ N + +FK D DF
Sbjct: 352 GEYQKAGVMA----NKEDQIFKTDFDF 374
>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 413
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/346 (64%), Positives = 268/346 (77%), Gaps = 19/346 (5%)
Query: 1 MPSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES- 55
+P I E EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W +
Sbjct: 70 VPGIKEQEMDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNK 129
Query: 56 LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSL 115
+ DEK+FI+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSL
Sbjct: 130 INEDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSL 189
Query: 116 LLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSG 174
L++TYIK +++ LF A +T+PC+ KKADWAL WI D +FA+RL+AFA VEGIFFSG
Sbjct: 190 LIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALKWISDEKSSFAQRLVAFAAVEGIFFSG 249
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVE 234
+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+N+ S++ ++ I+ +AV+
Sbjct: 250 AFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNRPSKQVIQDIIVDAVQ 309
Query: 235 IEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGK 294
IE+EF+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY +NPFD+ME ISL GK
Sbjct: 310 IEQEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYKSSNPFDFMENISLGGK 369
Query: 295 TNFFEKRVGEYQKASVMSSLNG-----------NGGNHVFKMDEDF 329
TNFFEKRV +YQKA VM+S NGG+ F DEDF
Sbjct: 370 TNFFEKRVADYQKAGVMNSTKKAQEETTEGKGENGGDFAF--DEDF 413
>gi|389593521|ref|XP_003722014.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 388
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 127 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMST---EGTSKKFSLSEDF 388
>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
acridum CQMa 102]
Length = 411
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DEK+FI
Sbjct: 77 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKYFI 136
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK +
Sbjct: 137 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEN 196
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 197 AQRTYLFNAIDTIPCIRKKADWAIRWIQDKESTFAQRLVAFAAVEGIFFSGAFASIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+N+ S++ + I+ +AV IE+EF+ +A
Sbjct: 257 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKQIIHDIITDAVAIEKEFLTEA 316
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY +NPFD+ME ISL GKTNFFEKRVG
Sbjct: 317 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKTSNPFDFMENISLGGKTNFFEKRVG 376
Query: 304 EYQKASVMSS 313
+YQKA V++S
Sbjct: 377 DYQKAGVLAS 386
>gi|345107208|ref|YP_004821373.1| ribonucleotide reductase small subunit [Yoka poxvirus]
gi|344267282|gb|AEN03609.1| ribonucleotide reductase small subunit [Yoka poxvirus]
Length = 321
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 258/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N +RF +FPIQY +IW MYKKAEASFWT EEVDLS+DI W +LT+DEKHFI H
Sbjct: 2 EPILKENKNRFVIFPIQYRDIWNMYKKAEASFWTVEEVDLSKDINDWNTLTSDEKHFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++ Y+K++DE
Sbjct: 62 VLAFFAASDGIVNENLVERFCSEVQITEARCFYGFQMAIENIHSEMYSLLIDAYVKDTDE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF + ET+PCV KKADWAL WI ++ ++ ERL+AFA VEGIFFSGSF +IFWLKKR
Sbjct: 122 RMYLFNSIETMPCVKKKADWALKWIHNNDASYGERLVAFAAVEGIFFSGSFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L +E+RV I+ EAV IE+EF+ DALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPNEDRVVSIISEAVNIEQEFLTDALP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +M+ YI+FVADRLL LG K+Y V NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDMMNTYIKFVADRLLLELGFKKIYNVKNPFDFMECISLEGKTNFFEKRVAEY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM+S N F +D DF
Sbjct: 302 QKMGVMNSNEENS----FSLDVDF 321
>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|12644287|sp|P48592.2|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small subunit
gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
Length = 393
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ ++ LF A ET+P V +KADWAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ I+++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
Length = 393
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ ++ LF A ET+P V +KADWAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ I+++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>gi|426235770|ref|XP_004011853.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Ovis
aries]
Length = 351
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ++EK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 463
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 260/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE LL PN DRF +FPI+Y +IW+ YKKA+ASFWT EEVDL +D+ W L +E+ FI+
Sbjct: 142 EETLLKPNIDRFVVFPIKYQDIWKYYKKAQASFWTVEEVDLGKDLPDWVKLKEEERRFIS 201
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++ YIK +
Sbjct: 202 HVLAFFAASDGIVLENLVQRFSQEVQVAEARCFYGFQIAMENVHSEMYSLLIDAYIKEQE 261
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF A + +PCV KKADWA+ WI E+ F ERL+AFA VEGIFFSG+F +IFW KK
Sbjct: 262 EKTRLFHAIDNMPCVKKKADWAIEWIQSEESSFGERLVAFAAVEGIFFSGAFASIFWFKK 321
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEGLHCDFACL++S L K S+ER++ I+ +AV+IE+EF +AL
Sbjct: 322 RGLLPGLTFSNELISRDEGLHCDFACLIFSHLTYKPSKERIRNIITQAVDIEKEFWNEAL 381
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+ Y+EFVADRLL L C KVY NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 382 PVGLIGMNVTLMNYYVEFVADRLLLELNCDKVYHRENPFDFMENISLEGKTNFFEKRVGE 441
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA+VMS++N F +D DF
Sbjct: 442 YQKANVMSTVN---QRQEFTLDADF 463
>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
Length = 395
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 262/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W LT +E+
Sbjct: 73 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNER 130
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 131 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSILIDTYI 190
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ E+ LF A ET+P V +KADWAL+WI + F ER+IAFA VEGIFFSGSF +IF
Sbjct: 191 RDPQERDYLFNAVETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIF 250
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNE+ISRDEGLHCDFA L++ L + S ER+ I+++AV+IE+EF+
Sbjct: 251 WLKKRGLMPGLTFSNEMISRDEGLHCDFAVLMFQHLVQRPSRERIIEIIRDAVQIEQEFL 310
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK
Sbjct: 311 TVALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFSFMEMISLDGKTNFFEK 370
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V+ GN ++VF +D DF
Sbjct: 371 KVGEYQRMGVV----GNRLDNVFTLDADF 395
>gi|408391189|gb|EKJ70571.1| hypothetical protein FPSE_09324 [Fusarium pseudograminearum CS3096]
Length = 392
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/336 (64%), Positives = 268/336 (79%), Gaps = 14/336 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + LT+DE++FI
Sbjct: 59 DEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQYFI 118
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 119 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKDP 178
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D + +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 179 AQRTYLFNAVDTIPCIRKKADWAIRWIQDKNSSFAQRLVAFAAVEGIFFSGAFASIFWLK 238
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S L+ + S++ ++ I+ +AV IE+EF+ +A
Sbjct: 239 KRGLMPGLSFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVSIEQEFLTEA 298
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 299 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKSTNPFDFMENISLGGKTNFFEKRVA 358
Query: 304 EYQKASVMSSLNG----------NGGNHVFKMDEDF 329
+YQKA V+ S N NGG+ F D+DF
Sbjct: 359 DYQKAGVLHSANKKDEEEAPKGENGGD--FTFDDDF 392
>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
Length = 393
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W LT +E+
Sbjct: 71 PSI--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMTDWVRLTDNER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ ++ LF A ET+P V +KADWAL+WI + F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQRDYLFNAIETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA +++ L + S ER+ IV +AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVMMFQHLVQRPSRERIIEIVSDAVTIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN ALMS+YIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCALMSEYIEFVADRLLVELGVGKIYNTKNPFTFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVTS----NRLDNVFTLDADF 393
>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
Length = 349
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/328 (66%), Positives = 261/328 (79%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ +EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+ L ++EKH
Sbjct: 26 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWDGLKSEEKH 85
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E+ LF A +T+PCV +KADWAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDYLFNAVQTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RV I+ +AV IE+EF+
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFACLIYSYLVKKPSVDRVNDIIAKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V EYQ+ VMS N + F +D DF
Sbjct: 326 VAEYQRLGVMS----NVKDCEFTLDADF 349
>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
Length = 333
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/323 (68%), Positives = 256/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFW EEVD+S+DI W LT DEK+FI H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWIVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M Y+EFVADRL+ LG ++Y VTNP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|417409802|gb|JAA51392.1| Putative ribonucleotide reductase beta subunit, partial [Desmodus
rotundus]
Length = 336
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 16 EEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 76 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 136 KREFLFNAIETMPYVKKKADWALRWIADRQSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 195
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV+ I+ +AVEIE+EF+ +AL
Sbjct: 196 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVDAVEIEQEFLTEAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 256 PVGLIGMNCVLMKQYIEFVADRLFVELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 316 YQRFAVMTETTDN----VFTLDADF 336
>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
Length = 374
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/309 (69%), Positives = 258/309 (83%), Gaps = 3/309 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
PE EPLL NP RF +FPIQYP+IW+ YK+AEASFWT EEVDLS+D+ W++ L +DE++
Sbjct: 52 PELEPLLQENPRRFVVFPIQYPDIWDKYKQAEASFWTTEEVDLSKDLDDWKNKLNSDERY 111
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIAIENIHSEMYS+L+ETYI
Sbjct: 112 FISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAIENIHSEMYSMLIETYIS 171
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFW 181
EK LF A ET+PCV KKADWAL WI+ TF ER++AFA VEGIFFSGSF +IFW
Sbjct: 172 EPQEKEFLFNAIETLPCVKKKADWALLWINSKNATFGERIVAFAAVEGIFFSGSFASIFW 231
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKR LMPGLTFSNELISRDEGLHCDFACL++S L K S+ER++ I+++AV+IE+EF+
Sbjct: 232 LKKRNLMPGLTFSNELISRDEGLHCDFACLMFSHLVQKPSKERIQSIIQDAVKIEKEFLT 291
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP +++GMN ALM QYIEFVADRLLG LGC K+Y NPFD+M +IS +GKTNFFEK+
Sbjct: 292 EALPVSMIGMNCALMCQYIEFVADRLLGELGCEKIYNSQNPFDFMTIISNEGKTNFFEKK 351
Query: 302 VGEYQKASV 310
VGEYQK+ V
Sbjct: 352 VGEYQKSGV 360
>gi|403418121|emb|CCM04821.1| predicted protein [Fibroporia radiculosa]
Length = 412
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/333 (66%), Positives = 262/333 (78%), Gaps = 7/333 (2%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
+PE EPLL + RF +FPIQY EIW+MYKKAEASFWT EEVDLS+D W + L+ +E
Sbjct: 80 LPEHMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTVEEVDLSKDFHDWNNRLSDNE 139
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 140 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 199
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF A ET+PC+ KKADWAL WI D +FAERL+AFA VEGIFFSGSF +I
Sbjct: 200 IKDPQQREHLFDAIETIPCIKKKADWALRWISDKGCSFAERLVAFAAVEGIFFSGSFASI 259
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E V+ I+ EAVEIE+EF
Sbjct: 260 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRRIIAEAVEIEQEF 319
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K+YG TNPFD+M++ISLQGKTNFFE
Sbjct: 320 LTDALPCALIGMNSGLMCQYIEFVADRLLVALGDSKMYGSTNPFDFMDMISLQGKTNFFE 379
Query: 300 KRVGEYQKASVMSS---LNGNGGNHVFKMDEDF 329
KRV +Y KA V +S + F +DEDF
Sbjct: 380 KRVSDYAKAGVNASATNVKSEVSAKSFSLDEDF 412
>gi|417399461|gb|JAA46734.1| Putative ribonucleotide reductase beta subunit [Desmodus rotundus]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRQSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV+ I+ +AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVDAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLFVELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMTETTDN----VFTLDADF 351
>gi|361127540|gb|EHK99507.1| putative Ribonucleoside-diphosphate reductase small chain [Glarea
lozoyensis 74030]
Length = 439
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/344 (63%), Positives = 264/344 (76%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 98 PEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 157
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 158 RYFISHVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 217
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
+K +++ LF A ET+PC+ KKADWA+ WI D + TFA+RL+AFA +EGIFFSGSF +I
Sbjct: 218 VKEQAQRTYLFNAIETIPCIKKKADWAVRWIQDKNSTFAQRLVAFAAIEGIFFSGSFASI 277
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEG+H DFACLL+S L ++ S++ V+ ++ EAVEIE+EF
Sbjct: 278 FWLKKRGLMAGLTFSNELISRDEGMHTDFACLLFSHLNHRPSKQAVQDVITEAVEIEQEF 337
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y NPFD+ME ISL GKTNFFE
Sbjct: 338 LTEALPCALLGMNSNLMKQYIEFVADRLLVSLGNDKFYKTANPFDFMENISLAGKTNFFE 397
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKMDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 398 KRVGDYQKAGVMAGTQKKHEDTEAQTDAKAENGGD--FNFDEDF 439
>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
norvegicus]
gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
norvegicus]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ++EK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVMEIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLLG LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|339898226|ref|XP_003392500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 392
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 71 EEPLQQENPLRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 131 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMST---EGTSKKFSLSEDF 392
>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ailuropoda melanoleuca]
Length = 387
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 67 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 126
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 127 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 186
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 187 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 246
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 247 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 306
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 307 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 366
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 367 YQRFAVMAETTDN----VFTLDADF 387
>gi|403299934|ref|XP_003940726.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Saimiri boliviensis boliviensis]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K + NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|345568467|gb|EGX51361.1| hypothetical protein AOL_s00054g431 [Arthrobotrys oligospora ATCC
24927]
Length = 402
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/313 (68%), Positives = 253/313 (80%), Gaps = 2/313 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P +EPLL N RF +FPI Y E+W+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 52 PEEADEPLLVENKKRFVLFPINYHEVWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDE 111
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 112 RYFISHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 171
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+S +++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF AI
Sbjct: 172 IKDSSQRTYLFDAIDTIPCIKKKADWAIRWIEDEQSTFAQRLVAFAAVEGIFFSGSFAAI 231
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S+ V+ ++ EAV IE+EF
Sbjct: 232 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKADVEAVITEAVTIEQEF 291
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPC L+G+N LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 292 LTEALPCPLLGINAKLMKQYIEFVADRLLIALGNPKVYHSTNPFDFMETISLAGKTNFFE 351
Query: 300 KRVGEYQKASVMS 312
KRV +YQKA VM+
Sbjct: 352 KRVSDYQKAGVMA 364
>gi|396476250|ref|XP_003839975.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans JN3]
gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans JN3]
Length = 410
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/321 (67%), Positives = 254/321 (79%), Gaps = 2/321 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EPLL NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 66 PEEAHEPLLQENPQRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 125
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 126 RFFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 185
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I ++ LF A + +PC+ KKADWAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 186 ISEPRQRKYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 245
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL + S+E V+ I+ EAVEIE+EF
Sbjct: 246 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVEIEKEF 305
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL +LG K Y TNPFD+ME ISL GKTNFFE
Sbjct: 306 LSDALPCALLGMNATLMCQYIEFVADRLLLSLGNTKFYNATNPFDFMENISLAGKTNFFE 365
Query: 300 KRVGEYQKASVMSSLNGNGGN 320
KRVG+YQKA VM+S + N
Sbjct: 366 KRVGDYQKAGVMASTKKHEEN 386
>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
Length = 345
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 84 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 143
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 144 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 203
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 204 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 263
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 264 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 323
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 324 YQKAGVMST---EGTSKKFSLSEDF 345
>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+G+N LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGVNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
Length = 393
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ +++ LF A ET+P V +KADWAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPNQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ I+++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKHERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+V EYQ+ V S N ++VF +D DF
Sbjct: 369 KVAEYQRMGVAS----NRLDNVFTLDADF 393
>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
Length = 343
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/327 (67%), Positives = 261/327 (79%), Gaps = 4/327 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPI+Y +IW MYKKAEASFWT EEVDLS+D+ WE L++ E+HFI H
Sbjct: 17 EPLLQENPRRFVLFPIEYEDIWRMYKKAEASFWTVEEVDLSKDMNDWERLSSGEQHFIKH 76
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQVSEAR FYGFQIA+EN+HSEMYS+L++TYI+ E
Sbjct: 77 VLAFFAASDGIVNENLLERFAQEVQVSEARCFYGFQIAMENVHSEMYSVLIDTYIRERAE 136
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ RLF A ET+P V +KADWA NWI + TF ERL+AFA VEG+FFSGSF AIFWLKKR
Sbjct: 137 RERLFNAIETIPAVKRKADWAFNWITSTTATFGERLLAFAVVEGVFFSGSFAAIFWLKKR 196
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA LL+ L N+ SEERV IV+EAV IE+EF+ DAL
Sbjct: 197 GLMPGLTFSNELISRDEGMHCDFAVLLFKRYLVNRPSEERVGEIVREAVTIEQEFLTDAL 256
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LMSQYIEFVADRLL LG ++Y NPFD+M++ISL GKTNFFEKRVG+
Sbjct: 257 PVSLIGMNCGLMSQYIEFVADRLLVDLGMKRIYNTKNPFDFMDMISLDGKTNFFEKRVGD 316
Query: 305 YQKASVMSS--LNGNGGNHVFKMDEDF 329
YQ+ V S G+ G+ F++D DF
Sbjct: 317 YQRLGVAKSNRGGGDDGDDTFRLDVDF 343
>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
isoform 1 [Callithrix jacchus]
Length = 351
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K + NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|451995294|gb|EMD87762.1| hypothetical protein COCHEDRAFT_1182649 [Cochliobolus
heterostrophus C5]
Length = 410
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/314 (68%), Positives = 252/314 (80%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EPLL NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 67 PEEAHEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 126
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 127 RFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 186
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I ++ LF A + +PC+ KKADWAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 187 ISEPRQRQYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 246
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL + S+E V+ I+ EAV IE+EF
Sbjct: 247 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVAIEQEF 306
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFE
Sbjct: 307 LSDALPCALLGMNAKLMCQYIEFVADRLLLALGNTKVYHATNPFDFMENISLAGKTNFFE 366
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 367 KRVGDYQKAGVMAS 380
>gi|154337607|ref|XP_001565036.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 392
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 71 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVALNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 131 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQPFDFMEMISLQGKTNFFEKKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMSA---EGTSKKFSLSEDF 392
>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
Length = 401
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/342 (65%), Positives = 263/342 (76%), Gaps = 17/342 (4%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
P I E EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L
Sbjct: 63 PGIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRL 122
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DE++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIHSE YSLL
Sbjct: 123 NEDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMIENIHSETYSLL 182
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK +++ LF A + +PC+AKKADWA+ WI D TF +RL+AFA VEGIFFSGS
Sbjct: 183 IDTYIKEPKQRTYLFDAIDNIPCIAKKADWAIKWIQDQESTFGQRLVAFAAVEGIFFSGS 242
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ I+ EAV I
Sbjct: 243 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVAI 302
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ DALP AL+GMN LM QYIEFVADRLL ALG K + TNPFD+ME ISL GKT
Sbjct: 303 EKEFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNNKYFHSTNPFDFMESISLAGKT 362
Query: 296 NFFEKRVGEYQKASVMSS--------LNGNGGNHVFKMDEDF 329
NFFEKRVG+YQKA VM+S + +GG DEDF
Sbjct: 363 NFFEKRVGDYQKAGVMASTKKEAKEETSNDGG---LNFDEDF 401
>gi|154340038|ref|XP_001565976.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 388
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVALNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 127 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQPFDFMEMISLQGKTNFFEKKVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMSA---EGTSKKFSLSEDF 388
>gi|402226169|gb|EJU06229.1| ribonucleotide reductase small subunit [Dacryopinax sp. DJM-731
SS1]
Length = 421
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/345 (64%), Positives = 262/345 (75%), Gaps = 21/345 (6%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W++ L +E+HFI
Sbjct: 77 DEPLLKSTQRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWQNRLNNNERHFI 136
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK++
Sbjct: 137 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDA 196
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ +KADWAL WI D TFAERL+AFA VEGIFFSGSF AIFW+K
Sbjct: 197 EQREYLFDAIDTIPCIKRKADWALKWISDKRSTFAERLVAFAAVEGIFFSGSFAAIFWMK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + + V+ I+ EAV IE+ F+ DA
Sbjct: 257 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVRKIITEAVLIEQTFLTDA 316
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QYIEFVADRLL ALG KVY VTNPFD+M+LISLQGKTNFFEKRV
Sbjct: 317 LPVALIGMNSNLMNQYIEFVADRLLVALGNEKVYNVTNPFDFMDLISLQGKTNFFEKRVS 376
Query: 304 EYQKASVM---------SSLNGNGGNHV----------FKMDEDF 329
+Y KA V S N G V F +DEDF
Sbjct: 377 DYAKAGVNVSAAQKSKPSKPNSTGSTEVQQETPISSKTFTLDEDF 421
>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase small chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase small chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 380
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/339 (65%), Positives = 261/339 (76%), Gaps = 10/339 (2%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
+ S +EPLL + RF +FPI+Y EIW YK+AEASFWTAEE+DLS+D+ W++ L AD
Sbjct: 42 ITSDDQEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWDNKLNAD 101
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
EKHFI HVLAFFAASDGIV ENL RF EVQV+EAR FYGFQI +ENIHSE+YSLL++T
Sbjct: 102 EKHFIKHVLAFFAASDGIVNENLIERFSGEVQVAEARCFYGFQIMMENIHSEVYSLLIDT 161
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCA 178
Y++ E++ LF A +T+PC+ KKADWAL WI D TF ERLIAFA VEGIFFSGSF +
Sbjct: 162 YVREPTERAHLFDAIDTIPCIRKKADWALTWISDKKSTFGERLIAFAAVEGIFFSGSFAS 221
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL++ L + + V+ I+ +AVEIE+E
Sbjct: 222 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLERRPHPDTVQAIIAQAVEIEKE 281
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+ DALPC L+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME+ISL GKTNFF
Sbjct: 282 FLSDALPCKLIGMNADLMCQYIEFVADRLLVALGNEKFYNATNPFDFMEMISLSGKTNFF 341
Query: 299 EKRVGEYQKASVMSSLNGN--------GGNHVFKMDEDF 329
EKRV +Y KA VM+ G GG +F +DEDF
Sbjct: 342 EKRVSDYAKAGVMTRSRGEDGAEAKEAGGGGMFSLDEDF 380
>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
Length = 349
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 261/328 (79%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S+ +EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+ L ++EKH
Sbjct: 26 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWDGLKSEEKH 85
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E+ LF A +T+PCV +KADWAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDYLFNAVQTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LK+RGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RV I+ +AV IE+EF+
Sbjct: 206 LKRRGLMPGLTYSNELISRDEGLHCNFACLMYSYLVKKPSVDRVNDIIAKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V EYQ+ VMS N + F +D DF
Sbjct: 326 VAEYQRLGVMS----NVKDCEFTLDADF 349
>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
Length = 319
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 255/323 (78%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N +RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT +EK+FI H
Sbjct: 2 EPILAKNQNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVISIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVINPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|393215957|gb|EJD01448.1| ribonucleotide reductase small subunit [Fomitiporia mediterranea
MF3/22]
Length = 412
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/331 (65%), Positives = 261/331 (78%), Gaps = 7/331 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D W++ L +E+HFI
Sbjct: 82 QEPLLVESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDQHDWQNKLNDNERHFI 141
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 142 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 201
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A ET+PC+ +KADWAL+WI D TF ERL+AFA VEGIFFSG+F +IFWLK
Sbjct: 202 VQREYLFDAVETIPCIKRKADWALHWISDKRSTFGERLVAFAAVEGIFFSGAFASIFWLK 261
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + + VK I+ +AV+IE+EF+ DA
Sbjct: 262 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVKKIITDAVKIEQEFLTDA 321
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KVY TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 322 LPVSLIGMNAKLMCQYIEFVADRLLTALGNEKVYNSTNPFDFMDMISLQGKTNFFEKRVS 381
Query: 304 EYQKASVMSSLNGN-----GGNHVFKMDEDF 329
+Y KA V S + G + VF +DEDF
Sbjct: 382 DYAKAGVNVSASSKTKAEGGSSKVFTVDEDF 412
>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/318 (66%), Positives = 255/318 (80%), Gaps = 5/318 (1%)
Query: 13 NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFA 72
NP RF +FP+ YP++WEMYKK ASFWT EEVDL DI +WE L ++E+HFI VLAFFA
Sbjct: 25 NPHRFVLFPLHYPKMWEMYKKTMASFWTVEEVDLHTDITEWEKLNSNEQHFIKTVLAFFA 84
Query: 73 ASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
ASDGIV ENL +FM +VQV EAR FYGFQIAIENIH+EMYS L+ET IK+ E++RLF
Sbjct: 85 ASDGIVNENLCQQFMAQVQVPEARCFYGFQIAIENIHAEMYSTLIETLIKDQRERNRLFH 144
Query: 133 AFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLT 192
A +TVP V KKA+WAL WI+ FAERL+AFACVEGIFFSGSFC+IFWLKKRGLMPGL+
Sbjct: 145 AIDTVPSVQKKANWALKWINSENLFAERLLAFACVEGIFFSGSFCSIFWLKKRGLMPGLS 204
Query: 193 FSNELISRDEGLHCDFACLLYSLLR-NKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLH DFACLLYS L+ KL ++ V +V EAVEIE+EF+ ++LP L+GM
Sbjct: 205 FSNELISRDEGLHTDFACLLYSTLKYTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGM 264
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM QYIE VADRLL ++G K+Y +NPFDWM +IS+ GKTNFFEK+VGEY KA++M
Sbjct: 265 NSRLMQQYIEMVADRLLVSIGYEKIYNSSNPFDWMNIISVSGKTNFFEKKVGEYAKANIM 324
Query: 312 SSLNGNGGNHVFKMDEDF 329
S N + VF++D+DF
Sbjct: 325 S----NKKDKVFRLDDDF 338
>gi|406663814|ref|ZP_11071833.1| Ribonucleoside-diphosphate reductase subunit beta [Cecembia
lonarensis LW9]
gi|405551928|gb|EKB47525.1| Ribonucleoside-diphosphate reductase subunit beta [Cecembia
lonarensis LW9]
Length = 326
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 260/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N +RF +FPIQ+ +IW+ YKKAEASFWTAEE+DLSQD++ W++L E+HFI+H
Sbjct: 5 EPILQDNKNRFVLFPIQHDDIWQFYKKAEASFWTAEEIDLSQDLKDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIKN E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPVE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ +L A E + CV KKA+WAL WID +F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGL+FSNELISRDEGLHCDFAC LY+ + N+L +E V I+K+AVEIE+EFV DALP
Sbjct: 184 LMPGLSFSNELISRDEGLHCDFACHLYTKHVNNQLPKETVTKIIKDAVEIEKEFVTDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL L C KV+ TNPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELDCEKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM S F ++EDF
Sbjct: 304 QKAGVMKSKEAIDSPK-FSVEEDF 326
>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
Length = 414
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/337 (65%), Positives = 260/337 (77%), Gaps = 15/337 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + + DEK+FI
Sbjct: 80 DEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 139
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 140 SHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 199
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 200 AQRTYLFNAIDTIPCIRKKADWALTWITDKKSTFATRLVAFAVVEGIFFSGAFASIFWLK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ IV +AV IE+EF+ +A
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQTVQDIVTDAVNIEQEFLTEA 319
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 320 LPCGLLGMNATLMKQYIEFVADRLLVALGNEKVYKATNPFDFMENISLGGKTNFFEKRVA 379
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKMDEDF 329
+YQKA VM S NGG+ F D+DF
Sbjct: 380 DYQKAGVMGSTTKKEEEATEGKGENGGD--FSFDDDF 414
>gi|428672848|gb|EKX73761.1| ribonucleoside-diphosphate reductase small chain, putative [Babesia
equi]
Length = 335
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/310 (66%), Positives = 254/310 (81%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL P+P R ++PI++P+ WE YKKA+ASFWTAEE+D S D+ W LT+DE+HFI+
Sbjct: 16 DEFLLNPDPLRIGLYPIKFPDFWEWYKKAQASFWTAEEIDFSLDLAHWNKLTSDERHFIS 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA +F+++V++ EA++FY FQIA+ENIHSE YSLL+E YIK+
Sbjct: 76 NVLAFFAASDGIVLENLALKFLRDVKLPEAQSFYSFQIAVENIHSETYSLLIENYIKDEA 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E++RLFRA +T+ V KA+WA WI + FAER++A+A VEGI FSGSFCA+FWLKKR
Sbjct: 136 ERTRLFRAIDTIQAVKDKANWAAKWITENNAFAERIVAYAAVEGILFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DF C +Y L++KL E V+ I+KEAV +ER F+CD+LP
Sbjct: 196 GLMPGLTFSNELISRDEGLHADFGCFIYQNLKHKLPNEAVQQIIKEAVIVERSFICDSLP 255
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYIEFVADRLL LG VY VTNPFDWM+LIS+QGKTNFFEKRVGEY
Sbjct: 256 CDLIGMNSQLMIQYIEFVADRLLKLLGVPPVYNVTNPFDWMDLISVQGKTNFFEKRVGEY 315
Query: 306 QKASVMSSLN 315
QKA +M++ N
Sbjct: 316 QKAGIMANQN 325
>gi|146090970|ref|XP_001466408.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 388
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 127 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKKVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMST---EGTSKKFSLSEDF 388
>gi|382546360|ref|NP_001244266.1| ribonucleoside diphosphate reductase small subunit [Bombyx mori]
gi|380503816|dbj|BAL72672.1| ribonucleoside diphosphate reductase small subunit [Bombyx mori]
Length = 375
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPIQYP+IW+MYKKAEASFWT EEVDLS+D+ WE+L E+HFI
Sbjct: 55 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIK 114
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI++
Sbjct: 115 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPK 174
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWAL WI + TF ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 175 ERDFLFNAVETLPCVKKKADWALQWIASKTATFGERIVAFAAVEGIFFSGSFASIFWLKK 234
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++ L K ++E V I+K+AV IE+EF+ DAL
Sbjct: 235 RGLMPGLTFSNELISRDEGLHTDFACLMFQHLVQKPTKECVLHIIKDAVVIEQEFLTDAL 294
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMSQYIEFVADRLL L K Y NPFD+M LISL+GKTNFFEK+VGE
Sbjct: 295 PVRLLGMNCELMSQYIEFVADRLLVDLIGEKHYNTKNPFDFMNLISLEGKTNFFEKKVGE 354
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK VM+ N ++VF +D DF
Sbjct: 355 YQKCGVMA----NRLDNVFTLDADF 375
>gi|451851899|gb|EMD65197.1| hypothetical protein COCSADRAFT_181130 [Cochliobolus sativus
ND90Pr]
Length = 410
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/309 (69%), Positives = 251/309 (81%), Gaps = 2/309 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EPLL NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W + L DE+ FI+
Sbjct: 72 EPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 131
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TYI
Sbjct: 132 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTYISEPR 191
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A + +PC+ KKADWAL WI D + TFA RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 192 QRQYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASIFWLKK 251
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEG+H DFACLL+SLL + S+E V+ I+ EAV IE+EF+ DAL
Sbjct: 252 RGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVAIEQEFLSDAL 311
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 312 PCALLGMNAKLMCQYIEFVADRLLLALGNTKVYHATNPFDFMENISLAGKTNFFEKRVGD 371
Query: 305 YQKASVMSS 313
YQKA VM+S
Sbjct: 372 YQKAGVMAS 380
>gi|392593078|gb|EIW82404.1| ribonucleotide reductase small subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 413
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/314 (68%), Positives = 254/314 (80%), Gaps = 2/314 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E+HFI
Sbjct: 88 EEPLLKESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNNNERHFI 147
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 148 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 207
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A ET+PCV +KADWAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 208 AQREYLFDAVETIPCVKRKADWALRWISDQRSTFAERLVAFAAVEGIFFSGSFASIFWLK 267
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL++ ++ + E V+ I+ EAV IE+EF+ DA
Sbjct: 268 KRGLMPGLTFSNELISRDEGMHTDFACLLFTHMKRRPHPEVVRHIITEAVTIEQEFLTDA 327
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM +YIEFVADRLL ALG KVY VTNPFD+M++ISLQGKTNFFEKRV
Sbjct: 328 LPVALIGMNSKLMRRYIEFVADRLLVALGNDKVYNVTNPFDFMDMISLQGKTNFFEKRVS 387
Query: 304 EYQKASVMSSLNGN 317
+Y KA+V S + N
Sbjct: 388 DYSKANVNHSSSNN 401
>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
sapiens]
Length = 423
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 103 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 162
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 163 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 222
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 223 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 282
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 283 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 342
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 343 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 402
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 403 YQRFAVMAETTDN----VFTLDADF 423
>gi|346972025|gb|EGY15477.1| ribonucleoside-diphosphate reductase small chain [Verticillium
dahliae VdLs.17]
Length = 414
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/337 (65%), Positives = 260/337 (77%), Gaps = 15/337 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + + DEK+FI
Sbjct: 80 DEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 139
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 140 SHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 199
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 200 AQRTYLFNAIDTIPCIRKKADWALTWITDKKSTFATRLVAFAVVEGIFFSGAFASIFWLK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ V+ IV +AV IE+EF+ +A
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQTVQDIVTDAVTIEQEFLTEA 319
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 320 LPCGLLGMNATLMKQYIEFVADRLLVALGNEKVYKATNPFDFMENISLGGKTNFFEKRVA 379
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKMDEDF 329
+YQKA VM S NGG+ F D+DF
Sbjct: 380 DYQKAGVMGSTTKKEEEATEGKGENGGD--FSFDDDF 414
>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 389
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/336 (65%), Positives = 264/336 (78%), Gaps = 14/336 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + LT+DE+ FI
Sbjct: 56 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQFFI 115
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 116 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 175
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A ET+PC+ KKADWA+ WI D +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 176 SQRTYLFNAIETIPCIRKKADWAIRWIQDKDSSFAQRLVAFAAVEGIFFSGAFASIFWLK 235
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ ++ I+ +AV IE+EF+ +A
Sbjct: 236 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKGRASKQVIQDIITDAVTIEQEFLTEA 295
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY NPFD+ME ISL GKTNFFEKRVG
Sbjct: 296 LPCALLGMNADLMKQYIEFVADRLLVALGNEKVYKSANPFDFMENISLGGKTNFFEKRVG 355
Query: 304 EYQKASVMSSLNG----------NGGNHVFKMDEDF 329
+YQKA V+ S NGG+ F D+DF
Sbjct: 356 DYQKAGVLHSATKNTEEEAPKGENGGD--FTFDDDF 389
>gi|409080028|gb|EKM80389.1| hypothetical protein AGABI1DRAFT_113579 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198206|gb|EKV48132.1| ribonucleotide reductase beta subunit [Agaricus bisporus var.
bisporus H97]
Length = 408
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 260/329 (79%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + RF +FPIQYPEIW+MYKKAEASFWTAEE+DLS+D+ W + + +E+HFI
Sbjct: 80 DEPLLKDSRRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWTNRMNDNERHFI 139
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 140 SHVLAFFAASDGIVNENLIERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 199
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A ET+PC+ +KA+WAL WI D TFAERLIAFA VEGIFFSGSF +IFW+K
Sbjct: 200 VQRDYLFDAIETIPCIKRKAEWALKWISDKRSTFAERLIAFAAVEGIFFSGSFASIFWMK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E VK I+ EAV IE+EF+ DA
Sbjct: 260 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVKAIITEAVVIEQEFLTDA 319
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QYIEFVADRLL ALG K+Y TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 320 LPVKLIGMNAELMCQYIEFVADRLLVALGNEKLYNKTNPFDFMDMISLQGKTNFFEKRVS 379
Query: 304 EYQKASV---MSSLNGNGGNHVFKMDEDF 329
+YQKA+V S+ + F +DEDF
Sbjct: 380 DYQKANVSHSTSTESTQPSGKTFTIDEDF 408
>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
Length = 393
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ ++ LF A ET+P V +KADWAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ I+++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+V EYQ+ V+S N ++VF +D DF
Sbjct: 369 KVAEYQRMGVVS----NPLDNVFTLDADF 393
>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
Length = 331
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/331 (65%), Positives = 260/331 (78%), Gaps = 2/331 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD- 59
MP EEPLL + RF +FPIQYPEIW+MYKKAEASFWTAEE+DLS+D+ W++ D
Sbjct: 1 MPYASEEPLLKESIRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWQNRMNDN 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++T
Sbjct: 61 ERHFISHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCA 178
YI+ + E+ LF A ET+PCVA+KA WAL WI D +F RL+AFA VEGIFFSGSF +
Sbjct: 121 YIREAAEREHLFNAVETIPCVARKAQWALRWINDDRSSFGIRLVAFAAVEGIFFSGSFAS 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWLKKRGLMPGLTFSNELI+RDEG+H DFACLL++ LR + + V+ I+ EAV IE+E
Sbjct: 181 IFWLKKRGLMPGLTFSNELITRDEGMHTDFACLLFAHLRRRPHPDVVRRIIMEAVTIEQE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+ DALP +L+GMN LM QYIEFVADRLL ALG KVY VTNPFD+M++ISLQGKTNFF
Sbjct: 241 FLTDALPVSLIGMNSTLMCQYIEFVADRLLVALGNEKVYNVTNPFDFMDMISLQGKTNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRV +Y+ A+V ++ F +DEDF
Sbjct: 301 EKRVSDYKMAAVNNTGEVKSSGKTFVLDEDF 331
>gi|390349734|ref|XP_798682.3| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2-like [Strongylocentrotus
purpuratus]
Length = 516
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLLTPN RF +FPI+YP++W+ YK+A ASFWT EEVDL +D + W+ L +EKHF+T
Sbjct: 195 DEPLLTPNAQRFVLFPIKYPDVWKFYKRAMASFWTTEEVDLGEDWKDWQKLKPEEKHFVT 254
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIA+ENIHSEMYSLL++TY+K+
Sbjct: 255 HVLAFFAASDGIVNENLVERFSQEVQIPEAKCFYGFQIAMENIHSEMYSLLIDTYVKDPT 314
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLF A +T+P V KKADWAL WI E TFAERL+AFA VEGIFFSGSF AIFW KK
Sbjct: 315 EKHRLFNAIQTMPFVKKKADWALKWIASDESTFAERLVAFAAVEGIFFSGSFAAIFWFKK 374
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEGLHCDFACLL+S L + R++ I+++AV +E E++ +AL
Sbjct: 375 RGLLPGLTFSNELISRDEGLHCDFACLLFSHLNHPTPVSRIQEIIRDAVRLEEEYLSEAL 434
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYI+FVADRLL L +Y NPFD+ME ISL+GK+NFFEKRVGE
Sbjct: 435 PVALIGMNARLMCQYIQFVADRLLMELKMSTIYKALNPFDFMENISLEGKSNFFEKRVGE 494
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK +VM+ H F +D DF
Sbjct: 495 YQKMNVMTP---ELXRHTFTLDADF 516
>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
98AG31]
Length = 385
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/334 (66%), Positives = 256/334 (76%), Gaps = 10/334 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + RF +FPI+Y EIW YK+AEASFWTAEE+DLS+D+ WE+ L DEKHFI
Sbjct: 52 EEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWENRLNDDEKHFI 111
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE+YSLL++TY++
Sbjct: 112 KHVLAFFAASDGIVNENLIERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYVREP 171
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+S LF A +T+PC+ KKADWAL WI D TF ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 172 IERSHLFDAIDTIPCIRKKADWALKWISDKQSTFGERLIAFAAVEGIFFSGSFASIFWLK 231
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + + V+ I+ +AVEIE+EF+ DA
Sbjct: 232 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLERRPHPDTVQAIISQAVEIEKEFLSDA 291
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN LM QYIEFVADRLL ALG K Y NPFD+ME+ISL GKTNFFEKRV
Sbjct: 292 LPCKLIGMNADLMCQYIEFVADRLLVALGNDKFYNAENPFDFMEMISLSGKTNFFEKRVS 351
Query: 304 EYQKASVMSSLNGN--------GGNHVFKMDEDF 329
+Y KA VM+ G GG +F +DEDF
Sbjct: 352 DYAKAGVMTRSKGEDGADAKEAGGGGLFSLDEDF 385
>gi|353237098|emb|CCA69079.1| probable small subunit of ribonucleotide reductase [Piriformospora
indica DSM 11827]
Length = 390
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/335 (65%), Positives = 256/335 (76%), Gaps = 11/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ WE+ L +E+HFI
Sbjct: 56 DEPLLKESQRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWENKLNDNERHFI 115
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK++
Sbjct: 116 SHVLAFFAASDGIVNENLVERFSAEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDA 175
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A E +PC+ +KADWAL WI D TF ERLIAFA VEGIFFSGSF AIFWLK
Sbjct: 176 AQREYLFDAIENIPCIKRKADWALRWISDRRSTFGERLIAFAAVEGIFFSGSFAAIFWLK 235
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+ LR + E VK I+ EAV IE+EF+ DA
Sbjct: 236 KRGLMPGLTFSNELISRDEGMHTDFACLLFGHLRKRPHPETVKRIITEAVTIEQEFLTDA 295
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KVY VTNPFD+M++ISLQGKTNFFEKRV
Sbjct: 296 LPVSLIGMNATLMRQYIEFVADRLLVALGNDKVYNVTNPFDFMDMISLQGKTNFFEKRVS 355
Query: 304 EYQKASVMSSL---------NGNGGNHVFKMDEDF 329
+Y KA V S F +DEDF
Sbjct: 356 DYAKAGVNQSAARTKDDDNSTAVANKGAFVLDEDF 390
>gi|348513219|ref|XP_003444140.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Oreochromis niloticus]
Length = 349
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 256/325 (78%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQY +IW+MYK+A+ASFWT EEVDLS+D+ W+ L A+EKHFI+
Sbjct: 29 EEPLLRENPRRFVIFPIQYRDIWKMYKQAQASFWTVEEVDLSKDLAHWDRLKAEEKHFIS 88
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV EAR+FY FQI IE +HSEMYS+L+ TYI++
Sbjct: 89 HVLAFFAASDGIVNENLVQRFSQEVQVPEARSFYSFQILIETVHSEMYSMLINTYIRDLK 148
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A +T+PCV +KADWAL WI D TF ER++AFA VEGIFFSGSF AI+WLKK
Sbjct: 149 ERDYLFNAIQTMPCVKRKADWALQWINDSKSTFGERIVAFAAVEGIFFSGSFAAIYWLKK 208
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLT+SNELISRDEGLHC+FACLLYS L K SE+RV+ I+ +AV IE+EF+ +AL
Sbjct: 209 RGLMPGLTYSNELISRDEGLHCNFACLLYSYLVKKPSEDRVRDIITKAVSIEQEFLTEAL 268
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
L+G+N LM QYIEFVADRLL LG KVY NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 269 AVDLIGINSCLMKQYIEFVADRLLTDLGLTKVYQAENPFDFMESISLEGKTNFFEKRVAE 328
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMSS+ F +D DF
Sbjct: 329 YQRFGVMSSMMDGE----FTLDADF 349
>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
Length = 409
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/319 (68%), Positives = 258/319 (80%), Gaps = 7/319 (2%)
Query: 2 PSIPEE----PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESL 56
P+I EE PLL NP+RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W + L
Sbjct: 62 PTIKEEEAHEPLLQENPNRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRL 121
Query: 57 TADEKHFITHVLAFFAASDGIVLENLA-ARFMKEVQVSEARAFYGFQIAIENIHSEMYSL 115
DE+ FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSL
Sbjct: 122 NDDERFFISHVLAFFAASDGIVNENLVDERFSSEVQIPEARCFYGFQIMMENIHSETYSL 181
Query: 116 LLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSG 174
L++TYI +++ LF A + +PC+ KKADWAL WI D + TFA RL+AFA VEGIFFSG
Sbjct: 182 LIDTYISEPRQRTYLFNAIDNIPCIRKKADWALKWISDKNSTFANRLVAFAAVEGIFFSG 241
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVE 234
SF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL + S++ VK I+ EAVE
Sbjct: 242 SFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKDAVKAIITEAVE 301
Query: 235 IEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGK 294
IE+EF+ +ALPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GK
Sbjct: 302 IEQEFLTEALPCALLGMNSTLMCQYIEFVADRLLLALGNTKVYNATNPFDFMENISLAGK 361
Query: 295 TNFFEKRVGEYQKASVMSS 313
TNFFEKRVG+YQKA VM+S
Sbjct: 362 TNFFEKRVGDYQKAGVMAS 380
>gi|403418122|emb|CCM04822.1| predicted protein [Fibroporia radiculosa]
Length = 385
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/337 (66%), Positives = 258/337 (76%), Gaps = 11/337 (3%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
+PE EPLLT + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS D+ W + L DE
Sbjct: 49 LPEYLEPLLTESKRRFVLFPIQYHDIWQMYKKAEASFWTAEEIDLSHDLWDWKDRLNDDE 108
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K+FI+HVLAFFAASDGIV ENL RF EVQV+EAR FYGFQI IENIHSE YSLLL+TY
Sbjct: 109 KYFISHVLAFFAASDGIVNENLVDRFSNEVQVAEARCFYGFQIMIENIHSETYSLLLDTY 168
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +++ LF A ET+PC+ KKADWAL WI D +FAERL+AFA VEGIFFSGSF +I
Sbjct: 169 IKDQKQRAHLFDAIETIPCIKKKADWALRWIADKQSSFAERLVAFAAVEGIFFSGSFASI 228
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLT+SNELI RDEG+H DFACLLY LR +L + I+ EAV IE+EF
Sbjct: 229 FWLKKRGLMPGLTYSNELIIRDEGMHTDFACLLYHHLRRRLHPSVILAIITEAVIIEQEF 288
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL LG Y TNPFD+M++ISLQGKTNFFE
Sbjct: 289 LTEALPCALIGMNVRLMCQYIEFVADRLLTTLGNKNYYHSTNPFDFMDMISLQGKTNFFE 348
Query: 300 KRVGEYQKASVMSSLNGNG-------GNHVFKMDEDF 329
KRV EY A + SS NG VF +DEDF
Sbjct: 349 KRVSEYAMAGLHSSANGTNTLTESTHTTRVFSLDEDF 385
>gi|401422190|ref|XP_003875583.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 392
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 71 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 131 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ +KA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMST---EGTSKKFSLSEDF 392
>gi|401424595|ref|XP_003876783.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 388
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 127 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ +KA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMST---EGTSKKFSLSEDF 388
>gi|432107625|gb|ELK32858.1| Ribonucleoside-diphosphate reductase subunit M2 B [Myotis davidii]
Length = 353
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ++EK+FI+
Sbjct: 33 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWHKLKSEEKYFIS 92
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+
Sbjct: 93 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIREPK 152
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 153 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV+ I+ AVEIE+EF+ +AL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVNAVEIEQEFLTEAL 272
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 273 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 332
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 333 YQRFAVMAENTDN----VFTLDADF 353
>gi|354484403|ref|XP_003504377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Cricetulus griseus]
Length = 354
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEKHFI+
Sbjct: 34 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKHFIS 93
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 94 HVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 153
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA EG FFSGSF AIFWLKK
Sbjct: 154 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAGEGGFFSGSFAAIFWLKK 213
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV+ I+ +AV+IE+EF+ +AL
Sbjct: 214 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIVDAVQIEQEFLTEAL 273
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 274 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 333
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 334 YQRFAVMAETTDN----VFTLDADF 354
>gi|345326583|ref|XP_001508783.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ornithorhynchus anatinus]
Length = 367
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYPEIW+MYK+A+ASFWTAEEVDLS+D+ W L ++EK+FI+
Sbjct: 47 EEPLLRKSSRRFVIFPIQYPEIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 106
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYIK+
Sbjct: 107 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIKDPK 166
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADW+L WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 167 KREFLFNAIETMPFVKKKADWSLRWIADRQSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 226
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE++VK I+ +AVEIE+EF+ +AL
Sbjct: 227 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVKKPSEDKVKEIIIDAVEIEQEFLTEAL 286
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 287 PVGLIGMNCTLMKQYIEFVADRLLVELGFSKVFHSDNPFDFMENISLEGKTNFFEKRVSE 346
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VMS N VF +D DF
Sbjct: 347 YQRFAVMSETTDN----VFTLDADF 367
>gi|440751431|ref|ZP_20930664.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Mariniradius saccharolyticus AK6]
gi|436480073|gb|ELP36338.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Mariniradius saccharolyticus AK6]
Length = 326
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 257/324 (79%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N DRF +FPIQ+ +IW+ YKKAEASFWTAEE+DLSQD+R W++L E+HFI+H
Sbjct: 5 EPILQENKDRFVLFPIQHDDIWKFYKKAEASFWTAEEIDLSQDLRDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK++ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDAVE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ RL A E + C+ KKA+WAL WID F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDRLLHAIEHIDCIKKKAEWALRWIDNG-NFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ + N L +E V I+ +AV IE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTKHVVNHLPKETVTRIIMDAVAIEKEFVTDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL L C KV+ TNPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELDCAKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM S N F + EDF
Sbjct: 304 QKAGVMKSKETVEVNR-FSIGEDF 326
>gi|379729068|ref|YP_005321264.1| ribonucleoside-diphosphate reductase small chain [Saprospira
grandis str. Lewin]
gi|378574679|gb|AFC23680.1| ribonucleoside-diphosphate reductase small chain [Saprospira
grandis str. Lewin]
Length = 323
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/323 (64%), Positives = 258/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N RF +FPIQ+ IWEM K+A A FWT +E+DL+ D+ W+ L+A+E+HFI H
Sbjct: 5 EPILQENDQRFVLFPIQHDAIWEMRKQALACFWTTDEIDLAADLHDWKKLSANEQHFIKH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL F ++VQ++EAR+FY QI IE+IH+E YSLL++TYI++S E
Sbjct: 65 VLAFFAASDGIVNENLVLNFYRDVQLAEARSFYATQIQIEDIHAETYSLLIDTYIQDSAE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A +T+PCV +KA WA+ WI+ + +FA RL+AFA VEGIFFSGSFC+I+WLKKRG
Sbjct: 125 KNALFNAMQTLPCVQRKAKWAIKWIEEAPSFAHRLVAFAAVEGIFFSGSFCSIYWLKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+MPGLTFSNELISRDEG+HCDFACLLYS+L N + E ++ I+ EAV +E+EFV DALP
Sbjct: 185 IMPGLTFSNELISRDEGMHCDFACLLYSMLENPIPSEELRSIITEAVSLEQEFVTDALPV 244
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN LMSQYIEFVADRLL +LG KVYG +NPF WMELISLQGKTNFFEKRVG+YQ
Sbjct: 245 SLIGMNAKLMSQYIEFVADRLLVSLGQPKVYGSSNPFPWMELISLQGKTNFFEKRVGDYQ 304
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA VM+ F +DEDF
Sbjct: 305 KAGVMAERE----KQTFSLDEDF 323
>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 354
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 33 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALNDGERHFIK 92
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 93 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 152
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ +KA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 153 EKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 212
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 213 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 272
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 273 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGE 332
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 333 YQKAGVMST---EGTSKKFSLSEDF 354
>gi|397502371|ref|XP_003821834.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 B [Pan paniscus]
Length = 515
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 195 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 254
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 255 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 314
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KK DWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 315 KREFLFNAIETMPYVKKKXDWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 374
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 375 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 434
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 435 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 494
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 495 YQRFAVMAETTDN----VFTLDADF 515
>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 414
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/333 (66%), Positives = 260/333 (78%), Gaps = 9/333 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E+HFI
Sbjct: 82 EEPLLKESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNKLNDNERHFI 141
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 142 SHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 201
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A +T+PC+ KKADWAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 202 AQRDYLFDAVDTIPCIKKKADWALTWISDQKSTFAERLVAFAAVEGIFFSGSFASIFWLK 261
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + VK I+ EAV IE+EF+ DA
Sbjct: 262 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDVVKRIITEAVAIEQEFLTDA 321
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QYIEFVADRLL +LG KVY TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 322 LPVKLIGMNAELMCQYIEFVADRLLVSLGNEKVYNSTNPFDFMDMISLQGKTNFFEKRVS 381
Query: 304 EYQKASV----MSSLNGN---GGNHVFKMDEDF 329
+Y KA V SS + + N +F +DEDF
Sbjct: 382 DYAKAGVNQTAASSTDASQPQASNRLFSLDEDF 414
>gi|390442956|ref|ZP_10230755.1| ribonucleotide reductase [Nitritalea halalkaliphila LW7]
gi|389667264|gb|EIM78687.1| ribonucleotide reductase [Nitritalea halalkaliphila LW7]
Length = 326
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 260/325 (80%), Gaps = 3/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L N +RF +FPIQ+ +IW+ YKKAEASFWTAEE+DLSQD+ W++LT E+HFI+
Sbjct: 4 QEPILQDNGNRFVLFPIQHNDIWQFYKKAEASFWTAEEIDLSQDLNDWKNLTDGERHFIS 63
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIKN+
Sbjct: 64 HILAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNAQ 123
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ L A ET+PCV KKADWAL WID +F ERLIAFA VEGIFFSGSFC++FWLKKR
Sbjct: 124 ERDYLLNAIETIPCVQKKADWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSLFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFAC LY+ + N+L +E VK I+ +AV IE+EFV DAL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACHLYTKHVVNQLPKETVKKIIMDAVAIEKEFVTDAL 242
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG +V+G +NPFD+M++ISL GKTNFFEKRVG+
Sbjct: 243 PVRLIGMNADLMCQYIEFVADRLLLELGNERVWGSSNPFDFMDMISLPGKTNFFEKRVGD 302
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM F + EDF
Sbjct: 303 YQKAGVMKK-EDTSDKPKFAIGEDF 326
>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
Length = 493
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/328 (64%), Positives = 255/328 (77%), Gaps = 4/328 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL NP+RF +FPI+YP++WE YK+ ASFWT EEVD + D+ W L +E+ FI
Sbjct: 166 DEDLLRENPNRFTLFPIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIK 225
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIV+ENLAARFM ++QV EARAFYGFQIA+EN+HSEMYS+LL+ Y++ +
Sbjct: 226 YVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPE 285
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+++LF A T+P VAKKA+WA+ WI S FAERL+ FACVEGI FSGSFC+IFWLKKR
Sbjct: 286 ERNQLFDAIHTIPTVAKKAEWAMRWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKR 345
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGL+FSN LISRDEGLHCDFAC LYS L+N+LS ERV IV EAV++E EF +AL
Sbjct: 346 CLMPGLSFSNVLISRDEGLHCDFACCLYSHLKNRLSRERVLQIVDEAVQLEDEFCTEALS 405
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYI FVADRLL +LG K Y NPFDWME+ISLQGK NFFE+RVGEY
Sbjct: 406 CELLGMNADLMRQYIRFVADRLLVSLGYEKHYNTRNPFDWMEMISLQGKANFFERRVGEY 465
Query: 306 QKASVMSSLNGNGGN----HVFKMDEDF 329
Q+A VM NGN +VF + DF
Sbjct: 466 QRAGVMGGNNGNSARDPSEYVFTTEADF 493
>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
H]
gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
knowlesi strain H]
Length = 349
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/323 (63%), Positives = 256/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L+ DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F+++VQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL EE V+ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGSRKIFHAKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ + VF ++ DF
Sbjct: 331 KSGVMAQ----RKDQVFCLNSDF 349
>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
Length = 337
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 256/325 (78%), Gaps = 2/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPI+YP+I+ MYK+A AS WT EEVDLS+DI+ W L +DEK FI+
Sbjct: 14 QEPLLVSNPRRFVLFPIEYPDIFTMYKQALASIWTVEEVDLSKDIKHWNILNSDEKRFIS 73
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQVSEAR+FYG QIA+ENIHSEMYSLL++TYI +
Sbjct: 74 HVLAFFAASDGIVNENLVQRFSVEVQVSEARSFYGLQIAVENIHSEMYSLLIDTYISDFQ 133
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK ++F A ET+P V KKADWA+ WI+ +E+ F+ERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 134 EKDKMFSAIETMPFVKKKADWAIRWIESTESHFSERLVAFAAVEGIFFSGSFASIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RG+MPGLT+SNELISRDEGLH DFACLLY L+ KL +R+ I+ EAV +E+EF+ +AL
Sbjct: 194 RGVMPGLTYSNELISRDEGLHTDFACLLYHHLKKKLPRDRILQIITEAVVLEKEFLTEAL 253
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LMSQYIEFVADRL+ LG K Y NPFD+ME ISL GKTNFFEKRVGE
Sbjct: 254 PVALIGMNVNLMSQYIEFVADRLIIELGYDKHYYAQNPFDFMENISLSGKTNFFEKRVGE 313
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM +H+F D DF
Sbjct: 314 YQRMGVMGK-AVESDSHIFTTDVDF 337
>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
Length = 405
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/333 (66%), Positives = 258/333 (77%), Gaps = 10/333 (3%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 73 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFIS 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSE YSLL++TYIK
Sbjct: 133 HVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPK 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+AKKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 193 QRTYLFDAIDTIPCIAKKAQWAMRWISDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L ++ ++ V+ I+ EAV IE+EF+ +AL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPDKKVVEDIIVEAVAIEQEFLTEAL 312
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRLL ALG K Y +NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 313 PVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSSNPFDFMESISLAGKTNFFEKRVGD 372
Query: 305 YQKASVMSSLNGNGGNHVFK--------MDEDF 329
YQKA VM+S + K DEDF
Sbjct: 373 YQKAGVMASTKKDASQDTAKDANDGGLSFDEDF 405
>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
marneffei ATCC 18224]
gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
marneffei ATCC 18224]
Length = 406
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/333 (65%), Positives = 259/333 (77%), Gaps = 6/333 (1%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
PSI E EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L
Sbjct: 64 PSIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRL 123
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DE++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL
Sbjct: 124 NDDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLL 183
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYI +++ LF A + +PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 184 IDTYINEPKQRTYLFDAIDNIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGS 243
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFAC+L+S L + + + ++ I+ +AV I
Sbjct: 244 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACMLFSHLNTRPNPKVIEDIIVDAVAI 303
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ DALPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKT
Sbjct: 304 EQEFLTDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMENISLAGKT 363
Query: 296 NFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
NFFEKRVG+YQKA VM+S + K DE+
Sbjct: 364 NFFEKRVGDYQKAGVMNSTKKDKEATTEKKDEN 396
>gi|3914644|sp|O46310.1|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase M2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 345
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 84 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 143
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+W + WI S +F +RLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 144 EKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKR 203
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 204 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 263
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 264 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 323
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 324 YQKAGVMST---EGTSKKFSLSEDF 345
>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
Length = 349
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/323 (63%), Positives = 256/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL E+ V+ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ + VF ++ +F
Sbjct: 331 KSGVMAQ----RKDQVFCLNTEF 349
>gi|157869457|ref|XP_001683280.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 392
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 71 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 131 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PF++ME+ISLQGKTNFFE++VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYHSTQPFEFMEMISLQGKTNFFERKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMST---EGTSKKFSLSEDF 392
>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
Length = 394
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/324 (65%), Positives = 257/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W LT +E+HFI+H
Sbjct: 75 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNERHFISH 134
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI++ +
Sbjct: 135 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 194
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+P V +KADWAL+WI + F ER+IAFA VEGIFFSGSF +IFWLKKR
Sbjct: 195 RDYLFNAIETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIFWLKKR 254
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ I+ +AV IE+EF+ DALP
Sbjct: 255 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPCRERIIEIISDAVTIEQEFLTDALP 314
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ALMS+YIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK+VGEY
Sbjct: 315 VNLIGMNCALMSEYIEFVADRLLVELGVGKLYNTKNPFTFMEMISLDGKTNFFEKKVGEY 374
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q+ V S N ++VF +D DF
Sbjct: 375 QRMGVTS----NRLDNVFTLDADF 394
>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
chabaudi]
gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 349
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/323 (64%), Positives = 249/323 (77%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L RF + PI YPE+W YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILNKESSRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F++EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YI++ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQIIEAKKFYAFQIAVENIHSETYSLLIDNYIRDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P + KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL EE V+ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC KV+ NPF WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFSWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM VF ++ DF
Sbjct: 331 KSGVM----AQRKEQVFSLNTDF 349
>gi|425772246|gb|EKV10657.1| Ribonucleotide reductase small subunit RnrA, putative [Penicillium
digitatum Pd1]
gi|425777425|gb|EKV15599.1| Ribonucleotide reductase small subunit RnrA, putative [Penicillium
digitatum PHI26]
Length = 402
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 258/332 (77%), Gaps = 9/332 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF MFPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 71 EPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERYFIS 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 131 HVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYINEPK 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+AKKA+WAL WI D TFA RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 191 QRTYLFDAIDTIPCIAKKANWALRWISDHESTFASRLVAFAAVEGIFFSGSFASIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S + ++ + V+ I+ EAV IE+EF+ DAL
Sbjct: 251 RGLMPGLTFSNELISRDEGLHTDFACLLFSHMNHRPDPKLVQDIIVEAVGIEQEFLTDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN LM +YIEFVADRLL ALG K Y TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 311 PCGLLGMNSKLMCEYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKTNFFEKRVGD 370
Query: 305 YQKASVMSS----LNGNGGNHV---FKMDEDF 329
YQKA VM+S +N G V DEDF
Sbjct: 371 YQKAGVMASTKQEVNAEGEKVVSDGLNFDEDF 402
>gi|407916476|gb|EKG09844.1| Ribonucleotide reductase [Macrophomina phaseolina MS6]
Length = 407
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/311 (69%), Positives = 250/311 (80%), Gaps = 2/311 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE+ FI+
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 133
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 134 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPR 193
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A + +PC+ KKADWAL WI D + TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRNYLFNAIDNIPCIKKKADWALRWICDKNSTFASRLIAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEG+H DFACLL+S +++K S E V+ I+ EAVEIE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGMHTDFACLLFSHIKSKPSPESVEKIITEAVEIEKEFLTDAL 313
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PVALLGMNATLMCQYIEFVADRLLVALGNKKYYNSTNPFDFMENISLNGKTNFFEKRVGD 373
Query: 305 YQKASVMSSLN 315
YQKA VM N
Sbjct: 374 YQKAGVMEKTN 384
>gi|395328927|gb|EJF61317.1| hypothetical protein DICSQDRAFT_61362 [Dichomitus squalens LYAD-421
SS1]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/311 (69%), Positives = 253/311 (81%), Gaps = 4/311 (1%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
+PE EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 27 LPEHMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDDE 86
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 87 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 146
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF A +T+PC+ KKADWAL WI D TFAERL+AFA VEGIFFSGSF +I
Sbjct: 147 IKDPKQREHLFDAIDTIPCIKKKADWALRWISDKQSTFAERLVAFAAVEGIFFSGSFASI 206
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + ++ I+ EAVEIE+EF
Sbjct: 207 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDHIRKIITEAVEIEQEF 266
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALP AL+GMN LM QYIEFVADRLL ALG K YGVTNPFD+M++ISLQGKTNFFE
Sbjct: 267 LTDALPVALIGMNSKLMCQYIEFVADRLLVALGDEKHYGVTNPFDFMDMISLQGKTNFFE 326
Query: 300 KRVGEYQKASV 310
KRV +Y KA +
Sbjct: 327 KRVSDYSKAGI 337
>gi|429863484|gb|ELA37935.1| ribonucleotide reductase small subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 413
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/340 (65%), Positives = 264/340 (77%), Gaps = 18/340 (5%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + + DEK+FI
Sbjct: 76 DEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 196 AQRTYLFNAIDTIPCIRKKADWALRWITDTKSTFAQRLVAFAAVEGIFFSGAFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLLYS L+++ S++ ++ I+ +AV+IE+EF+ +A
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKHRPSKQVIEDIIVDAVKIEQEFLTEA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY NPFD+ME ISL GKTNFFEKRV
Sbjct: 316 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYKSVNPFDFMENISLGGKTNFFEKRVA 375
Query: 304 EYQKASVMSSLNG--------------NGGNHVFKMDEDF 329
+YQKA VM+S NGG+ F DEDF
Sbjct: 376 DYQKAGVMNSAKKYQDESAGSSEEKGENGGDFCF--DEDF 413
>gi|424842989|ref|ZP_18267614.1| ribonucleotide reductase, beta subunit [Saprospira grandis DSM
2844]
gi|395321187|gb|EJF54108.1| ribonucleotide reductase, beta subunit [Saprospira grandis DSM
2844]
Length = 323
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/323 (64%), Positives = 257/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N RF +FPIQ+ IWEM K+A A FWT +E+DL+ D+ W+ L+A+E+HFI
Sbjct: 5 EPILQENDQRFVLFPIQHDAIWEMRKQALACFWTTDEIDLAADLHDWKKLSANEQHFIKQ 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL F ++VQ++EAR+FY QI IE+IH+E YSLL++TYI++S E
Sbjct: 65 VLAFFAASDGIVNENLVLNFYRDVQLAEARSFYATQIQIEDIHAETYSLLIDTYIQDSAE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A +T+PCV +KA WA+ WI+ + +FA RLIAFA VEGIFFSGSFC+I+WLKKRG
Sbjct: 125 KNELFNAMQTLPCVQRKAKWAIKWIEEAPSFAHRLIAFAAVEGIFFSGSFCSIYWLKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+MPGLTFSNELISRDEG+HCDFACLLYS+L N L E ++ I+ EAV +E+EFV DALP
Sbjct: 185 IMPGLTFSNELISRDEGMHCDFACLLYSMLENPLPSEELRSIITEAVSLEQEFVTDALPV 244
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN LMSQYIEFVADRLL +LG KVYG +NPF WMELISLQGKTNFFEKRVG+YQ
Sbjct: 245 SLIGMNAKLMSQYIEFVADRLLVSLGQPKVYGSSNPFPWMELISLQGKTNFFEKRVGDYQ 304
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA VM+ F +DEDF
Sbjct: 305 KAGVMAERE----KQTFSLDEDF 323
>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/335 (64%), Positives = 259/335 (77%), Gaps = 7/335 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADE 60
PS +E +L NP+RF +FPI+YP++WE YK+A ASFWT EEVD + D+ ++ L +E
Sbjct: 20 PSELDEAVLRENPNRFTLFPIRYPDLWEFYKRAVASFWTVEEVDFTGDLYDFDHKLKEEE 79
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI +VLAFFAASDGIV+ENL+ARFM EVQV EARAFYGFQIA+EN+HSEMYS+LL+ Y
Sbjct: 80 RRFIKYVLAFFAASDGIVMENLSARFMSEVQVPEARAFYGFQIAMENVHSEMYSVLLDHY 139
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
+++ E+ +LF A +T+ V KKADWAL WI S +FAERL+AFACVEGI FSGSFCAIF
Sbjct: 140 VRDPAERRQLFNAIQTIATVGKKADWALRWISSSNSFAERLVAFACVEGIHFSGSFCAIF 199
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKR LMPGL+FSN LISRDEGLHCDFAC LY L+N+LS ERV IV EAV +E EF
Sbjct: 200 WLKKRLLMPGLSFSNCLISRDEGLHCDFACCLYGHLKNRLSRERVVKIVDEAVRLEDEFC 259
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+AL C L+GMN LM QYI FVADRLL +LG K Y NPFDWME+ISLQGK NFFE+
Sbjct: 260 TEALSCELLGMNADLMRQYIRFVADRLLVSLGYDKYYNTVNPFDWMEMISLQGKANFFER 319
Query: 301 RVGEYQKASVMSSLNGNG------GNHVFKMDEDF 329
RVGEYQ+A VM+ NG+ HVF+ D DF
Sbjct: 320 RVGEYQRACVMAGDNGSAEQARGSSEHVFRTDCDF 354
>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 400
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/332 (66%), Positives = 259/332 (78%), Gaps = 9/332 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF MFPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 69 EPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERYFIS 128
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 129 HVLAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPK 188
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+ KKA+WA+ WI+ E TFA RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 189 QRTYLFDAIDTIPCITKKANWAIRWINDRESTFASRLVAFAAVEGIFFSGSFASIFWLKK 248
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S + ++ + V+ I+ EAV IE+EF+ DAL
Sbjct: 249 RGLMPGLTFSNELISRDEGLHTDFACLLFSHMNHRPDPKVVEEIIVEAVGIEQEFLTDAL 308
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 309 PCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSANPFDFMESISLAGKTNFFEKRVGD 368
Query: 305 YQKASVMSS----LNGNGGNHV---FKMDEDF 329
YQKA VM+S +N G V DEDF
Sbjct: 369 YQKAGVMASTKQEVNAEGEKVVSDGLNFDEDF 400
>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YKKA ++FW E + L D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKKARSNFWAMENIYLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAA DGIVLEN RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAARDGIVLENFVQRFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
Length = 349
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/306 (69%), Positives = 247/306 (80%), Gaps = 2/306 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EPLLT +P RF +FPI++ ++W+MYKKAEASFWTAEE+DL DI+ W + L E+HFI
Sbjct: 29 EPLLTEDPHRFVLFPIEHDDVWQMYKKAEASFWTAEEIDLCHDIKDWDQKLNDKERHFIK 88
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F EVQ +EAR FYGFQIAIENIHSE+YSLL++TYI+++
Sbjct: 89 HVLAFFAASDGIVNENLAQNFATEVQWAEARCFYGFQIAIENIHSEVYSLLIDTYIRDAK 148
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK A +T+PCV KKA WAL W D +FAER+IAFA VEGIFFSGSFCA+FWLKK
Sbjct: 149 EKHECLTAIDTMPCVTKKAQWALRWCDPDRASFAERIIAFAAVEGIFFSGSFCAVFWLKK 208
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL+FSNELISRDEG+HCDFACLLYS LRNKL E + ++ +AV IE+EFV AL
Sbjct: 209 RGLMPGLSFSNELISRDEGMHCDFACLLYSKLRNKLPVETINALIGDAVTIEKEFVVSAL 268
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN M QYIEF ADRLL ALGC K+Y TNPFDWMELISLQGKTNFFEKRVGE
Sbjct: 269 PVELIGMNSRTMCQYIEFCADRLLLALGCPKLYEATNPFDWMELISLQGKTNFFEKRVGE 328
Query: 305 YQKASV 310
Y K+ V
Sbjct: 329 YAKSGV 334
>gi|1710398|sp|P50650.1|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
Length = 349
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 256/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL E+ ++ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ + VF ++ +F
Sbjct: 331 KSGVMAQ----RKDQVFCLNTEF 349
>gi|410027779|ref|ZP_11277615.1| ribonucleotide reductase subunit beta [Marinilabilia sp. AK2]
Length = 326
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 258/324 (79%), Gaps = 3/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N +RF +FPIQ+ +IW+ YKKAEASFWTAEE+DLSQD++ W+ L E+HFI+H
Sbjct: 5 EPILQENKNRFVLFPIQHDDIWQFYKKAEASFWTAEEIDLSQDLKDWKDLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIKN E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPVE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ +L A E + CV KKA+WAL WI+ F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIENG-NFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ + N L + V I+K+AVEIE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTQHVLNPLPKSTVIEIIKDAVEIEKEFVTDALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC KV+ TNPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELGCSKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM S + F ++EDF
Sbjct: 304 QKAGVMKS-KETVDSPKFSIEEDF 326
>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii
17XNL]
gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
Length = 349
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/323 (63%), Positives = 251/323 (77%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L +RF + PI YPE+W YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F++EV++ EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P + KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL E V+ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC KV+ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ VF ++ DF
Sbjct: 331 KSGVMAQ----RKEQVFSLNTDF 349
>gi|389585905|dbj|GAB68635.1| ribonucleoside-diphosphate reductase small chain [Plasmodium
cynomolgi strain B]
Length = 355
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/323 (63%), Positives = 256/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L+ DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 37 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 96
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F+++VQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 97 VLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 156
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 157 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 216
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL EE V+ IVKEAVE+ER F+C++LPC
Sbjct: 217 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 276
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 277 DLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDLISLQGKTNFFEKRVADYQ 336
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ + VF ++ DF
Sbjct: 337 KSGVMAQ----RKDQVFSLNSDF 355
>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
Sal-1]
gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
[Plasmodium vivax]
Length = 349
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 256/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L+ DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F+++V+++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL EE V+ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ + VF ++ DF
Sbjct: 331 KSGVMAQ----RKDQVFCLNSDF 349
>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Meleagris gallopavo]
Length = 339
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/323 (68%), Positives = 257/323 (79%), Gaps = 6/323 (1%)
Query: 8 PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHV 67
PLL NP FPIQY +IW MYKKAEASFWTAEEVDLS+D++ WESL +EK+FI+HV
Sbjct: 22 PLLRENPGG-SSFPIQYHDIWRMYKKAEASFWTAEEVDLSKDLQHWESLKPEEKYFISHV 80
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+S E+
Sbjct: 81 LAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKER 140
Query: 128 SRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
LF A ET+PCV KKADWA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRG
Sbjct: 141 EFLFNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKKRG 200
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK I+ AV IE+EF+ +ALP
Sbjct: 201 LMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVKEIIMNAVLIEQEFLTEALPV 260
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEFVADRL+ LG K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 261 KLIGMNCTLMKQYIEFVADRLMLELGFRKIYKVENPFDFMENISLEGKTNFFEKRVGEYQ 320
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
+ VMS N F +D +F
Sbjct: 321 RMGVMSKPTDNS----FTLDAEF 339
>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
tropicalis]
gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
Length = 346
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 253/325 (77%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEP L NP RF +FPI YP+IW+MYKKA+ASFWTAEEVDLS+D+ WE L +E++FI+
Sbjct: 26 EEPFLRKNPQRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDLVHWEKLKPEERNFIS 85
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL+ETYIK+
Sbjct: 86 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIETYIKDPR 145
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF A ET+PCV KKA WAL WI D +F ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 146 RREFLFNAIETMPCVRKKAQWALRWISDRKASFGERVVAFAAVEGIFFSGSFAAIFWLKK 205
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++ L K +EERV I+ AV IE+EF+ +AL
Sbjct: 206 RGLMPGLTFSNELISRDEGLHTDFACLMFHYLVKKPTEERVTEIIVNAVRIEQEFLTEAL 265
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM YIEFVADRLL LGC K + NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 266 PVSLIGMNCTLMKTYIEFVADRLLVELGCSKAFKAENPFDFMENISLEGKTNFFEKRVSE 325
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 326 YQRFAVMAHTEDN----VFTLDADF 346
>gi|401410906|ref|XP_003884901.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
Length = 392
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 258/324 (79%), Gaps = 4/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP R+ + PIQ+ IWEMYKK EASFWTAEE+DL+QD+ WESL ++EKHFI
Sbjct: 73 EEPLLIANPRRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWESLNSNEKHFIK 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA +F+ E+Q+ EARAFYGFQIA+ENIHSE YSLL++ YI++
Sbjct: 133 YVLAFFAASDGIVLENLAEKFLSEIQIPEARAFYGFQIAMENIHSETYSLLIDQYIRDEK 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF A V VA KA WA WI+ FAERL+ FACVEGI FSGSFC+IFWLKKR
Sbjct: 193 EKMELFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCSIFWLKKR 252
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACLLYS L+NKL ++ V+ +V+EAV +ER F+C+ALP
Sbjct: 253 GLMPGLTFSNELISRDEGLHADFACLLYSQLKNKLPDKVVQDMVREAVTVERAFICEALP 312
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN M+QYIEFVADRLL +LG K++ TNPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 313 VDLIGMNNRSMAQYIEFVADRLLTSLGVPKIFFATNPFDWMELISLQGKTNFFEKRVGEY 372
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM+ + F +D DF
Sbjct: 373 QKAGVMA----DKEQQKFVLDADF 392
>gi|431797145|ref|YP_007224049.1| ribonucleotide reductase subunit beta [Echinicola vietnamensis DSM
17526]
gi|430787910|gb|AGA78039.1| ribonucleotide reductase, beta subunit [Echinicola vietnamensis DSM
17526]
Length = 327
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 4/325 (1%)
Query: 7 EPLLTPNPD-RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EP+L + RF +FPIQ+ +IWE YKKAEASFWTAEE+DL QD++ W++L+ DE+HFI+
Sbjct: 5 EPILEQGDNSRFVLFPIQHDDIWEFYKKAEASFWTAEEIDLGQDMKDWKNLSDDERHFIS 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK
Sbjct: 65 HVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKEPK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ RLF A E + CV KKADWAL WID + F ERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 ERDRLFNAIEHLDCVKKKADWALRWIDEGD-FQERLIAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFAC LY+ + N L +E V I+++AV IE+EFV DAL
Sbjct: 184 GLMPGLTFSNELISRDEGLHCDFACHLYTQHIVNPLPKETVSKIIQDAVAIEKEFVTDAL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LGC KV+ TNPFD+M++ISLQGKTNFFEKRVG+
Sbjct: 244 PVRLIGMNADLMCQYIEFVADRLLLELGCEKVWNSTNPFDFMDMISLQGKTNFFEKRVGD 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM + + F ++EDF
Sbjct: 304 YQKAGVMKGKDASDSAK-FSVEEDF 327
>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
[Aspergillus nidulans FGSC A4]
Length = 406
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/337 (65%), Positives = 260/337 (77%), Gaps = 18/337 (5%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFIS 133
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ I+ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLTDAL 313
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG K + TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNAKLMCQYIEFVADRLLVALGNKKYFNATNPFDFMESISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSSL------------NGNGGNHVFKMDEDF 329
YQKA VM+S +GNG DEDF
Sbjct: 374 YQKAGVMASTKKDPKQDETKTSDGNG----LSFDEDF 406
>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 320
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/321 (63%), Positives = 255/321 (79%), Gaps = 4/321 (1%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
+L DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKHVL 63
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFAASDGIVLENLA++F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E+
Sbjct: 64 AFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCAL 248
GLTFSNELISRDEGLH DF CL+YSLL NKL E+ V+ IVKEAVE+ER F+C++LPC L
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPCDL 243
Query: 249 VGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN LMSQYIEFVADRLL LGC K++ NPF+WM+LISLQGKTNFFEKRV +YQK+
Sbjct: 244 IGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQKS 303
Query: 309 SVMSSLNGNGGNHVFKMDEDF 329
VM+ + VF ++ +F
Sbjct: 304 GVMAQ----RKDQVFCLNTEF 320
>gi|390601337|gb|EIN10731.1| beta subunit of ribonucleotide reductase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 426
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/315 (68%), Positives = 252/315 (80%), Gaps = 2/315 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E+HFI
Sbjct: 98 QEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNERHFI 157
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 158 SHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 217
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A ET+PCV +KADWA+ WI D FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 218 AQRDYLFDAIETIPCVKRKADWAIRWINDQRSGFAERLVAFAAVEGIFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + E VK I+ EAV IE+EF+ DA
Sbjct: 278 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPEVVKAIIVEAVGIEQEFLTDA 337
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM QYIEFVADRLL ALG K Y VTNPFD+M++ISLQGKTNFFEKRV
Sbjct: 338 LPVALIGMNAKLMCQYIEFVADRLLVALGGEKHYNVTNPFDFMDMISLQGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNG 318
+Y KA V +S +G
Sbjct: 398 DYSKAGVATSKHGQA 412
>gi|383451662|ref|YP_005358383.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
indicum GPTSA100-9]
gi|380503284|emb|CCG54326.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
indicum GPTSA100-9]
Length = 325
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 261/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPIQ+ +IW++YKK EA FWTAEE+DL QDI W + L DE++FI
Sbjct: 5 EPILAENKDRFVIFPIQHHDIWDLYKKQEACFWTAEEIDLHQDITDWSTKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQ+ +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVSEVQYSEAKFFYGFQLMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF+A E P +AKKADWAL WID S +FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKNILFKAIENFPAIAKKADWALKWID-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ + L NK+S++R+ I+ A++IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNNHLVNKVSKDRITEIITNALDIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LGC KVY VTNPFD+M++ISL+GKTNFFEKRVGE
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVELGCKKVYNVTNPFDFMDMISLEGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V +N + G F D DF
Sbjct: 304 YQKAGV---VNNDAGEDKFSFDADF 325
>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
Length = 377
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/326 (66%), Positives = 255/326 (78%), Gaps = 11/326 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
+EPLL + RF +FPIQY +IW MYK+A+ASFWT+EE+ L+ D+R W E L +E++FI
Sbjct: 61 DEPLLRESQRRFVLFPIQYDDIWAMYKQAQASFWTSEEITLAYDMRDWTERLDDNERNFI 120
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 121 KHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 180
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ LF A ET+PC+ +KADWAL WI D S TFAERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 181 QERDHLFAAIETIPCIKRKADWALRWISDKSSTFAERLVAFAAVEGIFFSGSFAAIFWLK 240
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H +FACLL+S LR++ V+ IVKEAV IE EF+ DA
Sbjct: 241 KRGLMPGLTFSNELISRDEGMHTEFACLLFSHLRHRPHPSVVQRIVKEAVAIEHEFLSDA 300
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN ALM QYIEFVADRLL +LG K+Y TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 301 LPVSLIGMNAALMRQYIEFVADRLLYSLGQNKIYNATNPFDFMDMISLQGKTNFFEKRVS 360
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
EY KA+V H F DEDF
Sbjct: 361 EYAKANV---------QHNFTTDEDF 377
>gi|453087864|gb|EMF15905.1| Ribonuc_red_sm-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 416
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/310 (70%), Positives = 248/310 (80%), Gaps = 2/310 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EPLL NP RF +FPI+Y EIW MYKKAEASFWTAEE+DLS+D+ W + LT DE+ FI+
Sbjct: 78 EPLLAENPQRFVLFPIKYHEIWNMYKKAEASFWTAEEIDLSKDLHDWNKRLTDDERFFIS 137
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EV V EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 138 HVLAFFAASDGIVNENLVERFSAEVTVPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 197
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A + +PC+ +KADWAL WI D S TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 198 QRTYLFNAIDNIPCIRRKADWALRWISDKSSTFAMRLIAFAAVEGIFFSGSFASIFWLKK 257
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEG+H DFACLL+S L+ K S+ V+ I+ EAV IE+EF+ DAL
Sbjct: 258 RGLMPGLTFSNELISRDEGMHTDFACLLFSHLKKKPSKAVVQSIIVEAVAIEQEFLTDAL 317
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 318 PCALLGMNAKLMCQYIEFVADRLLLALGNQKFYNATNPFDFMENISLGGKTNFFEKRVGD 377
Query: 305 YQKASVMSSL 314
YQKA VM +
Sbjct: 378 YQKAGVMEGI 387
>gi|388581984|gb|EIM22290.1| ribonucleoside-diphosphate reductase small chain [Wallemia sebi CBS
633.66]
Length = 410
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/326 (66%), Positives = 255/326 (78%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+DI W++ + DEKHFI
Sbjct: 86 DEPLLKENPRRFVLFPIQYTEIWQMYKKAEASFWTAEEMDLSKDITDWQNKINKDEKHFI 145
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ++EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 146 SHVLAFFAASDGIVNENLLERFSSEVQLAEARCFYGFQIMMENIHSETYSLLIDTYIPEA 205
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A ET+PC+ +KADWA+ WI D +F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 206 EQRDYLFNAIETIPCIKRKADWAVKWINDEKASFGERLVAFAAVEGIFFSGSFASIFWLK 265
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+ L + + V+ I+ EAV IE+EF+ DA
Sbjct: 266 KRGLMPGLTFSNELISRDEGLHTDFACLLFGHLNRRPHPKVVEKIITEAVTIEQEFLSDA 325
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM QYIEFVADRLL +LG K Y TNPFD+ME+ISLQGKTNFFEKRV
Sbjct: 326 LPVALIGMNAKLMCQYIEFVADRLLISLGNDKYYNATNPFDFMEMISLQGKTNFFEKRVS 385
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+Y KA V + G F +D DF
Sbjct: 386 DYAKAGVKADDTAGKGKE-FTLDADF 410
>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
Length = 405
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/335 (66%), Positives = 256/335 (76%), Gaps = 16/335 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL NP RF +FPI+Y EMYKKAEASFWTAEE+DLS+DI W + L DE+ FI
Sbjct: 76 EEPLLQENPQRFVLFPIKY---HEMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 132
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 133 SHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 192
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 193 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+ I+ EAV IE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPTAVEAIITEAVSIEQEFLTDA 312
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M+ ISL GKTNFFEKRVG
Sbjct: 313 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 372
Query: 304 EYQKASVMSSLNG---------NGGNHVFKMDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 373 DYQKAGVMASTKKEEDPSDEPENGG--AFRFDEDF 405
>gi|343084827|ref|YP_004774122.1| ribonucleotide reductase [Cyclobacterium marinum DSM 745]
gi|342353361|gb|AEL25891.1| ribonucleotide reductase [Cyclobacterium marinum DSM 745]
Length = 326
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 261/328 (79%), Gaps = 4/328 (1%)
Query: 4 IPEEPLLTPNPD-RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
+ EP+L + RF +FPIQ+ +IW+ YKKAEASFWTAEE+DL QD+ W++L+ E+H
Sbjct: 1 MKSEPILEQGDNSRFVLFPIQHDDIWKYYKKAEASFWTAEEIDLGQDLNDWKNLSDGERH 60
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK
Sbjct: 61 FISHVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIK 120
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
N +E+ LF A E + CV KKA+WAL WID F ERLIAFA VEGIFFSGSFC+IFWL
Sbjct: 121 NPEERDHLFNAIEHLDCVKKKAEWALRWIDKG-NFMERLIAFAAVEGIFFSGSFCSIFWL 179
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVC 241
KKRGLMPGLTFSNELISRDEGLHCDFAC LY+ L NKL +E+V I+K+AVEIE+EFV
Sbjct: 180 KKRGLMPGLTFSNELISRDEGLHCDFACHLYTKHLVNKLPQEQVTQIIKDAVEIEKEFVT 239
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LGC KV+ NPFD+M++ISL+GKTNFFEKR
Sbjct: 240 DALPVRLIGMNSELMCQYIEFVADRLLLELGCSKVWNSKNPFDFMDMISLEGKTNFFEKR 299
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VG+YQKA VM + + F ++EDF
Sbjct: 300 VGDYQKAGVMKGKDDSSSGK-FSIEEDF 326
>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
Length = 405
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/333 (65%), Positives = 255/333 (76%), Gaps = 10/333 (3%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 73 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFIS 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSE YSLL++TYIK
Sbjct: 133 HVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPK 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+ KKA WA+ WI D +F +RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 193 QRAYLFDAIDTIPCINKKAQWAMRWISDKESSFGQRLVAFAAVEGIFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L N+ ++ V+ I+ EAV IE+EF+ DAL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPDKKVVEDIIVEAVAIEQEFLTDAL 312
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 313 PVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSPNPFDFMESISLAGKTNFFEKRVGD 372
Query: 305 YQKASVMSSLNGNGGNHVFK--------MDEDF 329
YQKA VM+S + K DEDF
Sbjct: 373 YQKAGVMASTKKDTNQDAAKDTNAGGLSFDEDF 405
>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
Length = 406
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/337 (65%), Positives = 260/337 (77%), Gaps = 18/337 (5%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFIS 133
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ I+ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLTDAL 313
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG + + TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNAKLMCQYIEFVADRLLVALGNKEYFNATNPFDFMESISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSSL------------NGNGGNHVFKMDEDF 329
YQKA VM+S +GNG DEDF
Sbjct: 374 YQKAGVMASTKKDPKQDETKTSDGNG----LSFDEDF 406
>gi|389747381|gb|EIM88560.1| ribonucleotide reductase small subunit [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/336 (65%), Positives = 261/336 (77%), Gaps = 10/336 (2%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
+PE EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E
Sbjct: 82 LPERMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNE 141
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 142 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 201
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ E+ LF A ET+PCV +KADWAL WI D TFAERL+AFA VEGIFFSGSF +I
Sbjct: 202 IKDPKERDYLFDAVETIPCVKRKADWALKWISDKRATFAERLVAFAAVEGIFFSGSFASI 261
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELI+RDEG+H DFACLL+S L+ + + V I+ +AV+IE+EF
Sbjct: 262 FWLKKRGLMPGLTFSNELITRDEGMHTDFACLLFSHLKKRPHPDTVLRIITDAVQIEQEF 321
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M++ISLQGKTNFFE
Sbjct: 322 LTDALPCALIGMNSKLMRQYIEFVADRLLLALGGNKHYNSTNPFDFMDMISLQGKTNFFE 381
Query: 300 KRVGEYQK------ASVMSSLNGNGGNHVFKMDEDF 329
KRV +Y K AS +S G+ F +DEDF
Sbjct: 382 KRVSDYAKAGVAASASGATSGPAAEGSKSFTLDEDF 417
>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
oryzae RIB40]
gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|391873153|gb|EIT82227.1| ribonucleotide reductase, beta subunit [Aspergillus oryzae 3.042]
Length = 405
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 258/334 (77%), Gaps = 13/334 (3%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE+ FI+
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERFFIS 133
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+ KKADWA+ WI D TF +RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFGQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L N+ + V+ ++ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPDPQIVEDVIVEAVSIEKEFLTDAL 313
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG K + TNPFD+M+ ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNSNLMCQYIEFVADRLLVALGNNKYFNATNPFDFMDNISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSSL---------NGNGGNHVFKMDEDF 329
YQKA VM+S +G+ G F DEDF
Sbjct: 374 YQKAGVMASTKKEAKQEESSGSAGGLSF--DEDF 405
>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
Length = 406
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 258/333 (77%), Gaps = 6/333 (1%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
P I E EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L
Sbjct: 64 PGIKEMEVNEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRL 123
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DE++F++ VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL
Sbjct: 124 NDDERYFVSRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLL 183
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYI +++ LF A + +PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 184 IDTYINEPKQRTYLFDAIDNIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGS 243
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ + + ++ I+ +AV I
Sbjct: 244 FAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPNPKVIEDIIVDAVAI 303
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ DALPC+L+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKT
Sbjct: 304 EQEFLTDALPCSLLGMNSKLMCQYIEFVADRLLVALGNKKYYNSTNPFDFMENISLAGKT 363
Query: 296 NFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
NFFEKRVG+YQKA VM+S + K DE+
Sbjct: 364 NFFEKRVGDYQKAGVMNSTKKDKDASGEKKDEN 396
>gi|338209704|ref|YP_004653751.1| ribonucleoside-diphosphate reductase [Runella slithyformis DSM
19594]
gi|336303517|gb|AEI46619.1| Ribonucleoside-diphosphate reductase [Runella slithyformis DSM
19594]
Length = 331
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/309 (68%), Positives = 256/309 (82%), Gaps = 2/309 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL +P RF +FPI++ +IW+ YK EA+FWTAEE+DL+ D++ W+ L E+HFI+
Sbjct: 9 EEPLLVEDPHRFVLFPIKHHDIWQFYKNHEAAFWTAEEIDLASDMQDWDKLNDGERHFIS 68
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F+KEVQ +EA+ FYGFQIA+ENIHSE YSLL++TYIK+
Sbjct: 69 HVLAFFAASDGIVNENLAVNFLKEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKDPV 128
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK R+ RA ET+PCV KKA+WAL WI G+ TFAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDRMLRAIETIPCVQKKAEWALRWI-GNGTFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLM GL+FSNELISRDEGLH DFACLLY+ + NKL EE V ++K+AV IE+EFV ++L
Sbjct: 188 GLMKGLSFSNELISRDEGLHRDFACLLYTDHIVNKLPEETVYSLIKDAVAIEQEFVTESL 247
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM++YIEFVAD LL +LG KVY NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 248 PVSLIGMNSKLMNEYIEFVADHLLLSLGLQKVYNAVNPFDFMDMISLQGKTNFFEKKVGE 307
Query: 305 YQKASVMSS 313
YQKA V +S
Sbjct: 308 YQKAGVKNS 316
>gi|452846268|gb|EME48201.1| hypothetical protein DOTSEDRAFT_69973 [Dothistroma septosporum
NZE10]
Length = 417
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/307 (70%), Positives = 248/307 (80%), Gaps = 2/307 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE+ FI+
Sbjct: 79 EPILQENPGRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 138
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 139 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 198
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A + +PC+ +KADWAL WI D + TFA RLIAFA VEGIFFSGSF AIFWLKK
Sbjct: 199 QRTYLFNAIDNIPCIRRKADWALRWISDKNSTFALRLIAFAAVEGIFFSGSFAAIFWLKK 258
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEG+H DFACLL+S L+NK ++ V+ I+ EAV IE+EF+ DAL
Sbjct: 259 RGLMAGLTFSNELISRDEGMHTDFACLLFSHLKNKPNQALVQSIITEAVTIEQEFLTDAL 318
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN LMSQYIEFVADRLL ALG K Y TNPFD+ME ISL GKTNFFEKRVGE
Sbjct: 319 PCKLLGMNAGLMSQYIEFVADRLLLALGNKKFYNATNPFDFMENISLGGKTNFFEKRVGE 378
Query: 305 YQKASVM 311
YQKA VM
Sbjct: 379 YQKAGVM 385
>gi|357628103|gb|EHJ77546.1| ribonucleoside-diphosphate reductase small chain [Danaus plexippus]
Length = 374
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 257/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQYP+IW+MYKKAEASFWT EEVDLS+D+ WESL E+HFI H
Sbjct: 55 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWESLKDCERHFIKH 114
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYI++ E
Sbjct: 115 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 174
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV KKADWAL WI + TF ER++AFA VEGIFFSGSF +IFW+KKR
Sbjct: 175 RDFLFNAIETLPCVKKKADWALQWIASKTATFGERIVAFAAVEGIFFSGSFASIFWMKKR 234
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACL++ L K S++ V I+K+AV IE+EF+ DALP
Sbjct: 235 GLMPGLTFSNELISRDEGLHTDFACLMFKHLVQKPSKDCVLKIIKDAVVIEQEFLTDALP 294
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMS YIEFVADRLL L K Y NPFD+M LISL+GKTNFFEK+VGEY
Sbjct: 295 VRLLGMNCELMSDYIEFVADRLLMELIGEKHYNTKNPFDFMNLISLEGKTNFFEKKVGEY 354
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM+ N ++VF +D +F
Sbjct: 355 QKWGVMA----NPDDNVFTLDAEF 374
>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
Af293]
gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus Af293]
gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus A1163]
Length = 405
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 256/333 (76%), Gaps = 10/333 (3%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 73 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFIS 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSE YSLL++TYIK
Sbjct: 133 HVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPK 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF A +T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 193 QRTYLFDAIDTIPCIRKKAQWAMRWISDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L ++ ++ ++ I+ EAV IE+EF+ DAL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPDKKVIEDIIVEAVAIEQEFLTDAL 312
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRLL ALG K + NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 313 PVALLGMNSKLMCQYIEFVADRLLVALGNKKYFNSPNPFDFMESISLAGKTNFFEKRVGD 372
Query: 305 YQKASVMSSLNGNGGNHVFK--------MDEDF 329
YQKA VM+S + K DEDF
Sbjct: 373 YQKAGVMASTKKDASQDTAKDANDGGLCFDEDF 405
>gi|358054684|dbj|GAA99610.1| hypothetical protein E5Q_06311 [Mixia osmundae IAM 14324]
Length = 474
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/332 (63%), Positives = 260/332 (78%), Gaps = 8/332 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL +RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W++ L +E+HF+
Sbjct: 143 EEPLLQETANRFVLFPIKYNEIWQMYKKAEASFWTAEEMDLSKDMHDWDNKLNDNERHFV 202
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE+YSLL++TYI+
Sbjct: 203 SHVLAFFAASDGIVNENLVERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYIREP 262
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++RLF A +T+PC+ +KA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 263 KERTRLFEAIDTIPCIQRKAQWALKWISDEKSCFGERLVAFAAVEGIFFSGSFASIFWLK 322
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S LR + + V+ I+ +AV+IE+EF+ +A
Sbjct: 323 KRGLMPGLSFSNELISRDEGLHTDFACLLFSHLRRRPHPDTVQKIITDAVKIEKEFLTEA 382
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG V+ TNPFD+ME ISLQGKTNFFEKRV
Sbjct: 383 LPVSLIGMNSELMCQYIEFVADRLLIALGNAPVWNTTNPFDFMENISLQGKTNFFEKRVS 442
Query: 304 EYQKASVMSSL------NGNGGNHVFKMDEDF 329
+Y KA +S N N +H+F ++EDF
Sbjct: 443 DYAKAGFSNSTKAGTAANENSDSHLFDLNEDF 474
>gi|398391450|ref|XP_003849185.1| hypothetical protein MYCGRDRAFT_110972 [Zymoseptoria tritici
IPO323]
gi|339469061|gb|EGP84161.1| hypothetical protein MYCGRDRAFT_110972 [Zymoseptoria tritici
IPO323]
Length = 415
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/341 (64%), Positives = 257/341 (75%), Gaps = 15/341 (4%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKH 62
+ +EP+L N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE+
Sbjct: 75 LEDEPILQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERF 134
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 135 FISHVLAFFAASDGIVNENLIERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIS 194
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+++ LF A + +PC+ KKADWAL WI D + TFA RLIAFA +EGIFFSGSF +IFW
Sbjct: 195 EPKQRTYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAIEGIFFSGSFASIFW 254
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEG+H DFACLL+S L NK S + V+ I+ EAV IE+EF+
Sbjct: 255 LKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLNNKPSNQVVEDIITEAVVIEQEFLT 314
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALPCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKTNFFEKR
Sbjct: 315 DALPCALLGMNAKLMCQYIEFVADRLLLALGNQKHYNATNPFDFMENISLGGKTNFFEKR 374
Query: 302 VGEYQKASVMSSLNGNGG-------------NHVFKMDEDF 329
VG+YQKA VM S+ N F DEDF
Sbjct: 375 VGDYQKAGVMDSIKKQAAKAEGADAEPAPVMNGDFAFDEDF 415
>gi|344303170|gb|EGW33444.1| hypothetical protein SPAPADRAFT_50323 [Spathaspora passalidarum
NRRL Y-27907]
Length = 419
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/327 (66%), Positives = 256/327 (78%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N RF MFPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E++FI
Sbjct: 93 EEPLLKENSRRFVMFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDNERYFI 152
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDG+V ENL F EVQ+ EA+AFYGFQI IE IHSE+YSLL++TY+K+
Sbjct: 153 SRVLAFFAASDGLVNENLVENFSAEVQIPEAKAFYGFQIMIEMIHSEVYSLLIDTYVKDP 212
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+PC+AKKADWAL WI D +AERL+AFA +EGIFFSGSF +IFWLK
Sbjct: 213 QEAEFLFDAIHTIPCIAKKADWALKWIADTDALYAERLVAFAAIEGIFFSGSFASIFWLK 272
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ L+N+ E V+ I+ EAV IE+E+ DA
Sbjct: 273 KRGLMPGLTFSNELISRDEGLHTDFACLLFAHLKNRPDPEIVERIIVEAVAIEKEYFTDA 332
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN ALM QY+EFVADRLL A G KVY V NPFD+ME ISL GKTNFFEKRV
Sbjct: 333 LPVSLLGMNCALMCQYVEFVADRLLVAFGNKKVYNVVNPFDFMENISLAGKTNFFEKRVS 392
Query: 304 EYQKASVMSSLN-GNGGNHVFKMDEDF 329
+YQ+A VM+ N +H FK DEDF
Sbjct: 393 DYQRAGVMAKTNEPTSSSHEFKFDEDF 419
>gi|410910828|ref|XP_003968892.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Takifugu rubripes]
Length = 360
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/324 (66%), Positives = 256/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+SL +EKHF++H
Sbjct: 41 EPLLEENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDSLKHEEKHFVSH 100
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR+FY Q+ +E++HSEMYSLL+ TYI++ E
Sbjct: 101 VLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSCQVLMESVHSEMYSLLINTYIRDLKE 160
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A T+PCV +KADWAL+WI D + TF ERL+AFA VEGIFFSGSF +I+WLKKR
Sbjct: 161 RDYLFNAIHTMPCVKRKADWALHWINDRTSTFGERLVAFAAVEGIFFSGSFASIYWLKKR 220
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT+SNELISRDEGLHC FACLL+S L K SE+RVK IV +AV IE+EF+ +ALP
Sbjct: 221 GLMPGLTYSNELISRDEGLHCTFACLLFSYLVKKPSEDRVKDIVTKAVSIEQEFLMEALP 280
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL LG KVY NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 281 VDLIGMNCCLMKQYIEFVADRLFADLGLAKVYHAENPFDFMESISLEGKTNFFEKRVAEY 340
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q+ +MSS + F +D DF
Sbjct: 341 QRFGIMSS----PMDSEFTLDADF 360
>gi|449302142|gb|EMC98151.1| hypothetical protein BAUCODRAFT_66775 [Baudoinia compniacensis UAMH
10762]
Length = 421
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/307 (70%), Positives = 247/307 (80%), Gaps = 2/307 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE+ FI+
Sbjct: 81 EPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 140
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 141 HVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 200
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A + +PC+ KKADWAL WI D + TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 201 QRQYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAVEGIFFSGSFASIFWLKK 260
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEG+H DFACLLYS LR+K S+E V I+ EAV IE+EF+ DAL
Sbjct: 261 RGLMAGLTFSNELISRDEGMHTDFACLLYSHLRHKPSKELVTKIITEAVVIEQEFLSDAL 320
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRL ALG + Y TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 321 PCALLGMNSKLMCQYIEFVADRLFVALGLSRHYNATNPFDFMENISLAGKTNFFEKRVGD 380
Query: 305 YQKASVM 311
YQKASVM
Sbjct: 381 YQKASVM 387
>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 360
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/323 (66%), Positives = 248/323 (76%), Gaps = 16/323 (4%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP L NP+RF +FPIQ ++W+MYKKAEASFWTAEE+DL D+ W LT +E+HFI H
Sbjct: 54 EPYLVANPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWAKLTDNERHFIKH 113
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F EVQ+ EAR FYGFQIAIENIHSE+YSLL++TYIK++ E
Sbjct: 114 VLAFFAASDGIVNENLAMNFSNEVQIPEARCFYGFQIAIENIHSEVYSLLIDTYIKDAVE 173
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K L RA ET+PCV KK ERL+AFA VEGIFFSGSFC++FWLKKRG
Sbjct: 174 KDHLLRAIETIPCVQKKHS------------NERLLAFAAVEGIFFSGSFCSVFWLKKRG 221
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGL+FSNE+ISRDEG+H DFACL+YS L NKL E RV I+++AV IE EFVCD+LP
Sbjct: 222 LMPGLSFSNEMISRDEGMHTDFACLMYSKLVNKLPESRVHEIIRDAVAIEHEFVCDSLPV 281
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN ALM QYIEFVADRLL +LG K+Y V NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 282 ELIGMNSALMCQYIEFVADRLLYSLGVSKIYNVKNPFDWMDMISLQGKTNFFEKRVGEYS 341
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA V S VF +D +F
Sbjct: 342 KAGVGVS----AEEQVFTLDAEF 360
>gi|348588881|ref|XP_003480193.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Cavia porcellus]
Length = 351
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 256/325 (78%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +EK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+ +
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIREPE 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 QRDFLFNAIETMPFVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEGLHCDFACL++ L NK S RV+ I+ +AV IE+EF+ +AL
Sbjct: 211 RGLLPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSAARVREIIVDAVRIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCELMKQYIEFVADRLLVELGFSKVFEAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N +F +D DF
Sbjct: 331 YQRFAVMAETTDN----IFTLDADF 351
>gi|389745325|gb|EIM86506.1| ribonucleotide reductase small subunit [Stereum hirsutum FP-91666
SS1]
Length = 420
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/329 (66%), Positives = 258/329 (78%), Gaps = 6/329 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E+HFI+
Sbjct: 92 EPLLIESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNERHFIS 151
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 152 HVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDPK 211
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV +KADWAL WI D FAERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 212 ERDYLFDAVETIPCVKRKADWALKWISDRRSCFAERLVAFAAVEGIFFSGSFASIFWLKK 271
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI+RDEG+H DFACLL+S ++ + + V+ I+ EAVEIE+EF+ DAL
Sbjct: 272 RGLMPGLTFSNELITRDEGMHTDFACLLFSHMKRRPHPDTVRRIISEAVEIEQEFLTDAL 331
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG K Y TNPFD+M++ISLQGKTNFFEKRV +
Sbjct: 332 PCALIGMNSKLMRQYIEFVADRLLLALGGDKYYNSTNPFDFMDMISLQGKTNFFEKRVSD 391
Query: 305 YQKASVMSSLNGNG----GNHVFKMDEDF 329
Y KA V SS G + F +DEDF
Sbjct: 392 YAKAGVASSAANAGGAAETSKGFSVDEDF 420
>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
Length = 408
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/327 (65%), Positives = 254/327 (77%), Gaps = 2/327 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
I EPLL NP RF + PIQ+ ++W MYKKA ASFWTAEEVDLS+D+ W L E+HF
Sbjct: 83 IAAEPLLRENPSRFVILPIQHRQVWSMYKKAVASFWTAEEVDLSRDLDHWRGLKDTEQHF 142
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I HVLAFFAASDGIV ENL RFM EVQ+ EAR FYGFQI IENIHSEMYSLL++TYI +
Sbjct: 143 IKHVLAFFAASDGIVNENLVERFMCEVQLPEARCFYGFQIMIENIHSEMYSLLIDTYIND 202
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK LF A ET+P V +KA+WA+ WID +FAER++AFA VEGIFFSGSF AIFWL
Sbjct: 203 PQEKHMLFNAVETLPAVKRKAEWAMRWIDHKRASFAERVVAFAAVEGIFFSGSFAAIFWL 262
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLT SNELISRDEGLHCDFACL++S+L K +ERV GI+ +AVEIE+EF+ +
Sbjct: 263 KKRGLMPGLTQSNELISRDEGLHCDFACLMFSMLHKKPPKERVIGIIMDAVEIEQEFLTE 322
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP +L+GMN LM +YIEFV+DRLL +LG KVY TNPF +ME IS++GKTNFFE+RV
Sbjct: 323 ALPVSLLGMNSTLMREYIEFVSDRLLVSLGYDKVYNATNPFPFMENISIEGKTNFFERRV 382
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQK+ VM++ +H D DF
Sbjct: 383 SEYQKSGVMAA-EKKEHSHQLVFDADF 408
>gi|440475735|gb|ELQ44398.1| ribonucleoside-diphosphate reductase subunit M2 B [Magnaporthe
oryzae Y34]
gi|440486447|gb|ELQ66310.1| ribonucleoside-diphosphate reductase subunit M2 B [Magnaporthe
oryzae P131]
Length = 403
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/310 (69%), Positives = 252/310 (81%), Gaps = 11/310 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+L NP RF +W+MYKKAEASFWTAEE+DLS+D+ W + LT DEK+FI
Sbjct: 73 DEPILQENPQRF---------VWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKYFI 123
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK +
Sbjct: 124 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKET 183
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA RLIAFA VEGIFFSG+F +IFWLK
Sbjct: 184 AQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFWLK 243
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+SLL N+ ++E VK IV +AV+IE+EF+ +A
Sbjct: 244 KRGLMPGLTFSNELISRDEGLHTDFACLLFSLLNNRPNKEVVKEIVVDAVKIEQEFLTEA 303
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRVG
Sbjct: 304 LPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRATNPFDFMENISLGGKTNFFEKRVG 363
Query: 304 EYQKASVMSS 313
EYQKA VM+S
Sbjct: 364 EYQKAGVMAS 373
>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
Length = 406
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P I +EPLL NP RF + PI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E+
Sbjct: 82 PLIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEER 141
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI++VLAFFAASDGIV ENL RF +EVQV+E R FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 142 YFISYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYI 201
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKA+W+L WI E + ERL+AFA VEGIFFSGSF +IF
Sbjct: 202 KDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIF 261
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + +K SE+RV+ I+ +AV+IE+EF+
Sbjct: 262 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFL 321
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 322 IEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEK 381
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N F ++ DF
Sbjct: 382 KVGEYQKMGVMAKATENQ----FTLNADF 406
>gi|403371741|gb|EJY85755.1| Ribonucleoside-diphosphate reductase small chain [Oxytricha
trifallax]
Length = 379
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/323 (65%), Positives = 249/323 (77%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP+RF + PI+Y +IW+MYK A+FWT+EE+DL+ D++ WE L +E+HFI H
Sbjct: 61 EPLLEDNPNRFVILPIKYNDIWKMYKDQMAAFWTSEEIDLATDVKDWERLNDNERHFIKH 120
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF E+QV EAR FYGFQ+ +ENIHSE YS+L++T I + E
Sbjct: 121 VLAFFAASDGIVNENLAQRFCTEIQVPEARCFYGFQMMMENIHSETYSVLIDTLISDPHE 180
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+A +P V KKA+WA+ WI S +FAERLIAFA +EGIFFSGSFC+IFWLKKRG
Sbjct: 181 KEFLFKAITNIPVVTKKAEWAIKWIGESASFAERLIAFAAIEGIFFSGSFCSIFWLKKRG 240
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEG+H DFACLLY L NKLS ER+ I+ AV IE EFV D+LP
Sbjct: 241 LMPGLTFSNELISRDEGMHTDFACLLYKHLNNKLSNERILEIITNAVGIELEFVSDSLPV 300
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYI FVADRLL ALG K Y V NPF+WM++ISL GKTNFFEKRVGEYQ
Sbjct: 301 ELIGMNSKLMGQYIMFVADRLLFALGVPKYYQVENPFEWMDMISLTGKTNFFEKRVGEYQ 360
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA+V + + VF +D DF
Sbjct: 361 KANVKQT----KEDKVFTLDADF 379
>gi|393245978|gb|EJD53487.1| ribonucleotide reductase small subunit [Auricularia delicata
TFB-10046 SS5]
Length = 410
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 261/334 (78%), Gaps = 10/334 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLLT + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ WE+ L +E+HFI
Sbjct: 77 DEPLLTESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWENKLNDNERHFI 136
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 137 SHILAFFAASDGIVNENLVERFSNEVQCAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 196
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ LF A +T+PC+ +KA+WAL WI D TF ERLIAFA VEGIFFSG+F +IFWLK
Sbjct: 197 ARRDYLFDAIDTIPCIKRKAEWALRWITDQDSTFGERLIAFAAVEGIFFSGAFASIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + + VK I+ EAV+IE+EF+ DA
Sbjct: 257 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRKRPHPDTVKMIITEAVKIEQEFLTDA 316
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QYIEFVADRLL ALG K Y +NPFD+M++ISLQGKTNFFEKRV
Sbjct: 317 LPVSLIGMNSKLMNQYIEFVADRLLVALGNEKHYNSSNPFDFMDMISLQGKTNFFEKRVS 376
Query: 304 EYQKASV-MSSLNG-------NGGNHVFKMDEDF 329
+Y KA V +S+ G + F +DEDF
Sbjct: 377 DYAKAGVNVSAAQGTDKAKTESSNVKTFSLDEDF 410
>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
kw1407]
Length = 378
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/326 (65%), Positives = 258/326 (79%), Gaps = 9/326 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N RF +FPI+Y EIW+MYKK EASFWTAEE+DLS+D+ W + L DE+ F+
Sbjct: 60 EEPLLKENAQRFVLFPIKYHEIWQMYKKHEASFWTAEEIDLSKDLHDWNNRLNDDERFFV 119
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +EN+HSE YSLL++TYIK++
Sbjct: 120 SHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENVHSETYSLLIDTYIKDT 179
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 180 AQRTHLFNAIDTIPCIRKKADWALKWISDRESTFAQRLVAFAAVEGIFFSGAFSSIFWLK 239
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+N+ S++ ++ I+ +AV+IE+EF+ +A
Sbjct: 240 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLKNRPSKQLIEEIIVDAVKIEQEFLTEA 299
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 300 LPCALLGMNSTLMKQYIEFVADRLLVALGNDKVYNSTNPFDFMENISLGGKTNFFEKRVP 359
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
E N +GGN F DEDF
Sbjct: 360 EEAPVE-----NVDGGN--FNFDEDF 378
>gi|449017273|dbj|BAM80675.1| ribonucleoside-diphosphate reductase beta chain [Cyanidioschyzon
merolae strain 10D]
Length = 383
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/318 (65%), Positives = 259/318 (81%), Gaps = 7/318 (2%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAA 73
DR+ +FPI++P+I+E YK+ ASFWTAEE+DL+ D+ W + LT E++F++HVLAFFAA
Sbjct: 70 DRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLAFFAA 129
Query: 74 SDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRA 133
SDGIVLENLA RFM++V++ EAR FYGFQIA+ENIHSE YSLL++ Y+K+ +E++ LFRA
Sbjct: 130 SDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTHLFRA 189
Query: 134 FETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+PCV +KA WA+ WI +F ERL+AFA VEGIFFSGSFCAIFWLKKRGLMPGLTF
Sbjct: 190 METMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTF 249
Query: 194 SNELISRDEGLHCDFACLLYSLL--RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
SNELISRDEGLHCDFAC LYS+L ++ ER+ ++++AVE E+EFVCDALP +L+GM
Sbjct: 250 SNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVSLIGM 309
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LMS YIEFVADRLL LG +++ NPFDWMELISLQGKTNFFEKRVGEYQKA+V
Sbjct: 310 NQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQKANVT 369
Query: 312 SSLNGNGGNHVFKMDEDF 329
+S N VF +D +F
Sbjct: 370 TSATDN----VFALDIEF 383
>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
gi|370988477|dbj|BAL43553.1| ribonucleotide reductase M2 beta [Xenopus laevis]
Length = 406
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 261/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P I +EPLL NP RF + PI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WE+L +E+
Sbjct: 82 PLIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEER 141
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI +VLAFFAASDGIV ENL RF +EVQV+E R FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 142 YFIAYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYI 201
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKA+W+L WI E + ERL+AFA VEGIFFSGSF +IF
Sbjct: 202 KDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIF 261
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + +K SE+RV+ I+ +AV+IE+EF+
Sbjct: 262 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFL 321
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 322 TEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEK 381
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQK VM+ N F ++ DF
Sbjct: 382 KVGEYQKMGVMAKATENQ----FTLNADF 406
>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
Length = 393
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W L DE+
Sbjct: 71 PSL--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ ++ LF A ET+P V +KADWAL WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALAWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L K ER+ I+++AV+IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQKPRRERIIEIIRDAVDIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V + N ++VF +D DF
Sbjct: 369 KVGEYQRMGVAT----NRLDNVFTLDADF 393
>gi|374724341|gb|EHR76421.1| ribonucleoside-diphosphate reductase beta chain [uncultured marine
group II euryarchaeote]
Length = 348
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 252/324 (77%), Gaps = 1/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N DRF +FPIQ+ +IWEMYK+ A FWTAEE+DL++D++ W++L ADE+HF+ H
Sbjct: 25 EPMLQENLDRFVLFPIQHSDIWEMYKQQMACFWTAEEIDLAEDLKDWKNLNADEQHFLKH 84
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENL F EV EARAFYGFQI +ENIH+E YSLL++TYIK+ E
Sbjct: 85 ILAFFAASDGIVNENLGINFSNEVCWPEARAFYGFQIMMENIHAETYSLLIDTYIKDEPE 144
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+A ETVP V +K +WA+ W+ + +FAERL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 145 KDHLFKALETVPSVKRKGEWAMRWLSRKQGSFAERLVAFAAVEGIFFSGSFCAIFWLKKR 204
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL++ L ++ I+ EAV+IE EFV ALP
Sbjct: 205 GLMPGLTFSNELISRDEGLHCDFACLLHNKLLRGAGAAKITRIIAEAVDIEIEFVTSALP 264
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYI+FVADRLL ALG K+Y V NPF WME+IS+QGKTNFFEKRV EY
Sbjct: 265 VSLIGMNSILMEQYIQFVADRLLVALGASKIYNVVNPFPWMEMISMQGKTNFFEKRVAEY 324
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM + + F +DEDF
Sbjct: 325 QKAGVMENASLGSVQQRFSVDEDF 348
>gi|384489720|gb|EIE80942.1| ribonucleoside-diphosphate reductase small chain [Rhizopus delemar
RA 99-880]
Length = 344
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 257/325 (79%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+E +L N RFC+FPI+Y EIW+ YKKAEASFWTAEE+DLS+D WE+ +T +E+ FI
Sbjct: 23 QEEILRENTRRFCLFPIKYHEIWQFYKKAEASFWTAEEIDLSRDQNDWENKMTENERFFI 82
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFA+SDGIV ENL F EV++ EA+ FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 83 SRVLAFFASSDGIVNENLVQNFCDEVKIPEAKCFYGFQIMIENIHSETYSLLIDTYIKDD 142
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+EK LF A +T+PC+ +KADWA WI +++FAERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 143 EEKEMLFSAIDTIPCIKRKADWAFKWISANDSFAERLVAFAAVEGIFFSGSFASIFWLKK 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL++ +R + S++RVK I+ EAV IE+EF+ DAL
Sbjct: 203 RGLMPGLTFSNELICRDEGLHTDFACLLFTHIRKQPSQQRVKDIIMEAVGIEQEFLTDAL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRL+ ALG K+Y TNPFD+M++ISLQGKTNFFEKRV +
Sbjct: 263 PVALIGMNSTLMCQYIEFVADRLMVALGFDKIYMATNPFDFMDMISLQGKTNFFEKRVSD 322
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+A VM N F +D DF
Sbjct: 323 YQRAGVM---NKTPVEKKFTLDADF 344
>gi|344272991|ref|XP_003408311.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Loxodonta africana]
Length = 386
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/317 (67%), Positives = 254/317 (80%), Gaps = 3/317 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W LT+DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLTSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L N+ SEERV+ I+ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNRPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV +
Sbjct: 271 PVGLIGMNSVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSD 330
Query: 305 Y--QKASVMSSLNGNGG 319
+ + S +S + G G
Sbjct: 331 FMLEGDSDISEVLGRKG 347
>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii GT1]
Length = 391
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/322 (67%), Positives = 257/322 (79%), Gaps = 4/322 (1%)
Query: 8 PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHV 67
PLL NP R+ + PIQ+ IWEMYKK EASFWTAEE+DL+QD+ WE+L +EKHFI +V
Sbjct: 74 PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWETLGENEKHFIKYV 133
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIVLENLA +F+ E+QV EARAFYGFQIA+ENIHSE YSLL++ YI++ +EK
Sbjct: 134 LAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEK 193
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
+LF A V VA KA WA WI+ FAERL+ FACVEGI FSGSFCAIFWLKKRGL
Sbjct: 194 LQLFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCAIFWLKKRGL 253
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLH DFACLLYS L++KL ++ V+ +V+EAV +ER F+C+ALP
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPDKVVQDMVREAVTVERAFICEALPVD 313
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN M+QYIEFVADRLL +LG K++ TNPFDWMELISLQGKTNFFEKRVGEYQK
Sbjct: 314 LIGMNNRSMAQYIEFVADRLLTSLGVPKIFFATNPFDWMELISLQGKTNFFEKRVGEYQK 373
Query: 308 ASVMSSLNGNGGNHVFKMDEDF 329
A VM+ + F +D DF
Sbjct: 374 AGVMA----DKDQQKFVLDADF 391
>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii VEG]
Length = 391
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/322 (67%), Positives = 257/322 (79%), Gaps = 4/322 (1%)
Query: 8 PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHV 67
PLL NP R+ + PIQ+ IWEMYKK EASFWTAEE+DL+QD+ WE+L +EKHFI +V
Sbjct: 74 PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWETLGENEKHFIKYV 133
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIVLENLA +F+ E+QV EARAFYGFQIA+ENIHSE YSLL++ YI++ +EK
Sbjct: 134 LAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEK 193
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
+LF A V VA KA WA WI+ FAERL+ FACVEGI FSGSFCAIFWLKKRGL
Sbjct: 194 LQLFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCAIFWLKKRGL 253
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLH DFACLLYS L++KL ++ V+ +V+EAV +ER F+C+ALP
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPDKVVQDMVREAVTVERAFICEALPVD 313
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN M+QYIEFVADRLL +LG K++ TNPFDWMELISLQGKTNFFEKRVGEYQK
Sbjct: 314 LIGMNNRSMAQYIEFVADRLLTSLGVPKIFFATNPFDWMELISLQGKTNFFEKRVGEYQK 373
Query: 308 ASVMSSLNGNGGNHVFKMDEDF 329
A VM+ + F +D DF
Sbjct: 374 AGVMA----DKDQQKFVLDADF 391
>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|41019487|sp|P42521.2|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
Length = 338
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 257/327 (78%), Gaps = 4/327 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFIT 65
EP+L N DRF +FPI+YP+IW MYKKA AS W AEE+DL D WE LT +E+HFI+
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA RFM EVQ+ EAR FYGFQIAIENIHSE YSLL+ETYIK+
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A ET+PC+ KKA+WAL WI+ S++FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLM GLTFSNELISRDEGLHCDFACLLY+ L+ KL + ++ ++++AVE E+EF+C++LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIEF ADRL+ +LG K++ +NPF+WME+ISLQ K+NFFE +V EY
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 306 QKASV---MSSLNGNGGNHVFKMDEDF 329
K V ++ N + +DEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>gi|374596274|ref|ZP_09669278.1| ribonucleotide reductase [Gillisia limnaea DSM 15749]
gi|373870913|gb|EHQ02911.1| ribonucleotide reductase [Gillisia limnaea DSM 15749]
Length = 325
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 260/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IW+ YKK EASFWTAEE+DL QD W + L ADE++FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDANDWNNKLNADERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LFRA ET P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFRAIETFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER++ I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNKHLVNKVPKERIREIIMDALNIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL L C K YG TNPFD+M++I+LQGKTNFFEKRVGE
Sbjct: 244 PASLIGMNAKLMTQYLEFVADRLLVELECEKEYGSTNPFDFMDMINLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N + + D DF
Sbjct: 304 YQKAGVM---NKDKDTNKISFDADF 325
>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
Length = 300
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/301 (71%), Positives = 249/301 (82%), Gaps = 2/301 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEEVDLS+D+ WESL +EKHFI+HVLAFFAASDGIV ENL RF KE
Sbjct: 1 MYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISHVLAFFAASDGIVNENLVERFSKE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV +KADWA+
Sbjct: 61 VQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D S ++AER++AFA VEGIFFSGSF +IFWLKKRG+MPGLTFSNELISRDEGLHCDF
Sbjct: 121 WINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++S L NK S+ER+ I+ EAV+IE+ F+ +ALPC L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMNCDLMRQYIEFVADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
L C K+Y NPFD+ME ISL+GKTNFFEKRVGEYQK VMS N G +H F +D D
Sbjct: 241 LELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEYQKMGVMSGGN-TGDSHAFTLDAD 299
Query: 329 F 329
F
Sbjct: 300 F 300
>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 378
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/312 (68%), Positives = 255/312 (81%), Gaps = 1/312 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P I +EPLL NP RF + PI+Y +IW+MYKKAEASFWTAEEVDLS+D+ WE+L +E+
Sbjct: 54 PRIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLPHWEALKPEER 113
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI++VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 114 YFISYVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 173
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKA+WAL WI E F ER++AFA VEGIFFSGSF +IF
Sbjct: 174 KDPKEREFLFNAIETLPCVKKKAEWALRWISDREAPFCERIVAFAAVEGIFFSGSFASIF 233
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + +K SE+RV+ I+ +AV+IE+EF+
Sbjct: 234 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFL 293
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 294 TEALPVELIGMNCKLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEK 353
Query: 301 RVGEYQKASVMS 312
+V EYQK VMS
Sbjct: 354 KVAEYQKMGVMS 365
>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
T2Bo]
gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
[Babesia bovis]
Length = 339
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 255/324 (78%), Gaps = 4/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE +L +P+R ++PI+YP+ WE YKKA+ASFWT+EE+DLS D++ W +LT E HFI
Sbjct: 20 EEFILVEDPNRNGLYPIKYPDFWEWYKKAQASFWTSEEIDLSSDLKDWGTLTEGEHHFIK 79
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA RF+K+V++ EA+ FY FQI +ENIHSE YSLL+E YI++
Sbjct: 80 NVLAFFAASDGIVLENLALRFLKDVKLPEAKFFYCFQITVENIHSETYSLLIEQYIRDEA 139
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLFRA ET+ V KA WA W++ ++FAER++A+A VEGIFFSGSFCAIFWLKKR
Sbjct: 140 EKDRLFRAIETIDAVRDKAIWAAKWMNDEKSFAERIVAYAAVEGIFFSGSFCAIFWLKKR 199
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELI+RDEGLH DF C +YS L++KL E V+ I+KEAV +ER FVCD+LP
Sbjct: 200 GLMPGLTFSNELIARDEGLHADFGCFIYSKLKHKLPAECVQQIIKEAVAVERVFVCDSLP 259
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM+QYIEFVADRLL ALG VY NPF+WMELIS+QGKTNFFEKRVGEY
Sbjct: 260 TDLIGMNSMLMAQYIEFVADRLLQALGVPPVYKTKNPFEWMELISVQGKTNFFEKRVGEY 319
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ +++ N F D DF
Sbjct: 320 QKSGILA----NQDEQKFATDADF 339
>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 297
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/301 (71%), Positives = 242/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEE+DL++D++ W++LTA+E+HF++H+LAFFAASDGIV ENL F E
Sbjct: 1 MYKKAEASFWTAEEIDLAEDLKDWDALTANERHFVSHILAFFAASDGIVNENLTGNFSTE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
V EAR FYGFQIA+ENIHSE YSLL++TYIK+S EK+ L A ETVPCV KKA WAL
Sbjct: 61 VTSPEARCFYGFQIAVENIHSETYSLLIDTYIKDSTEKNHLLNAIETVPCVQKKAHWALK 120
Query: 150 WID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W D G+ +FAER+IAFA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDAGNASFAERMIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACLLYS L NKL E R+ I+ AVEIE+EFV DALP L+GMN LM YIEF ADRLL
Sbjct: 181 ACLLYSKLVNKLPESRITKIITVAVEIEKEFVSDALPVELIGMNSKLMCDYIEFCADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
GALGC K Y TNPF+WME+ISLQGKTNFFEKRVGEY K+ V N + VF D D
Sbjct: 241 GALGCSKFYNATNPFEWMEMISLQGKTNFFEKRVGEYAKSGV----GVNKDDQVFCTDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|399218011|emb|CCF74898.1| unnamed protein product [Babesia microti strain RI]
Length = 332
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/324 (62%), Positives = 248/324 (76%), Gaps = 5/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E +L P PDR ++P+Q +IW YKKA+ASFWT EEVDL D R W LT E+HFI
Sbjct: 14 DEYILNP-PDRASLYPLQRVDIWNFYKKAQASFWTVEEVDLGTDSRDWLGLTDGERHFIK 72
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAA+F+ +V++ EA+ FY FQI +ENIHSEMYSLL++ YI+
Sbjct: 73 HVLAFFAASDGIVLENLAAKFLNDVKLLEAQFFYVFQITVENIHSEMYSLLIDKYIQEES 132
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LFRA ET+P + KKA+WA WI+ +FAERL+A+ VEGI FSGSFCAIFWLKKR
Sbjct: 133 EKMHLFRAVETIPAIRKKAEWAARWINNENSFAERLVAYTAVEGILFSGSFCAIFWLKKR 192
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH +F C +Y LR+ L E V I++ AV++ER F+CD+LP
Sbjct: 193 GLMPGLTFSNELISRDEGLHAEFGCYMYRQLRHPLPESTVHDIIRNAVQVERAFICDSLP 252
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM+QYIE+V+DRLL +LG K++ V NPFDWM+LISLQGKTNFFEKRVGEY
Sbjct: 253 CDLIGMNSRLMTQYIEYVSDRLLSSLGVSKIFNVANPFDWMDLISLQGKTNFFEKRVGEY 312
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA +M+ N F DF
Sbjct: 313 QKAGIMA----NQDEQTFSTSNDF 332
>gi|395328928|gb|EJF61318.1| beta subunit of ribonucleotide reductase [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 258/338 (76%), Gaps = 12/338 (3%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADE 60
+PE EPLLT RF +FPIQY EIW+MYK+A+ASFW+ EE++LS D+ W LT +E
Sbjct: 68 LPEHLEPLLTETTRRFVLFPIQYNEIWQMYKQAQASFWSVEEINLSHDLWDWNYKLTDNE 127
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+++VLAFFAASDGIV ENL RF EVQ +EAR FYGFQI IEN+HSE YSLL++TY
Sbjct: 128 RHFLSYVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMIENVHSETYSLLIDTY 187
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ E+ LF A ETVPC+ KKADWAL WI D FAERL+AFA VEGIFFSGSF +I
Sbjct: 188 IKDPAERKFLFDAIETVPCIKKKADWALRWIADERSVFAERLVAFAAVEGIFFSGSFASI 247
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR + RV I+ EAVEIE+EF
Sbjct: 248 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFHHLRRRPHPARVVKIITEAVEIEKEF 307
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALP +L+G+N LM QYIEFVADRLL ALG K Y TNPFD+M++ISLQGK NFFE
Sbjct: 308 LSEALPVSLIGINAQLMCQYIEFVADRLLVALGNEKHYNATNPFDFMDMISLQGKANFFE 367
Query: 300 KRVGEYQKASVMSSLNGNG--------GNHVFKMDEDF 329
KRV EY KA+ +L+ G NHVF ++EDF
Sbjct: 368 KRVSEYAKANFNHTLSREGSEKPAEGSSNHVFTLNEDF 405
>gi|386819559|ref|ZP_10106775.1| ribonucleotide reductase, beta subunit [Joostella marina DSM 19592]
gi|386424665|gb|EIJ38495.1| ribonucleotide reductase, beta subunit [Joostella marina DSM 19592]
Length = 326
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/308 (67%), Positives = 253/308 (82%), Gaps = 3/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPIQ+ +IWE YKK EA FWTAEE+DL QD+ W + L DE++FI
Sbjct: 6 EPILQENKDRFVIFPIQHHDIWEWYKKQEACFWTAEEIDLHQDLTDWNNKLNDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+KN
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKNEK 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF+A E P + KKADWAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKGQLFKAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L+NK+S+ER+K I+ EA++IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDFAVHLHNTHLKNKVSKERIKEIIVEALDIEREFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL + C K+Y TNPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PASLIGMNAKLMTQYLEFVTDRLLVEMECEKIYNSTNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMS 312
YQKA V+S
Sbjct: 305 YQKAGVLS 312
>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 379
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/306 (66%), Positives = 247/306 (80%), Gaps = 1/306 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL P+P R ++PIQYPEIW YK+A+ASFWTAEE+DLS D+ W LT E+HF++
Sbjct: 54 EEPLLKPSPKRLTLYPIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFLS 113
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+LAFFA+SDGIV ENL RF EVQV EAR FYGFQ+ IEN+HSE YSLL++TYIK+ +
Sbjct: 114 RILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDPE 173
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LFRA ET+P + +KA+WAL W D S TFAERL+AFA VEG+FFSGSF AIFW++K
Sbjct: 174 ERDFLFRAIETIPSIQRKAEWALTWTSDKSTTFAERLVAFAVVEGVFFSGSFAAIFWMRK 233
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEG+H DFACLL++ LR + + + IV EAVEIE+EF DAL
Sbjct: 234 RGLLPGLTFSNELISRDEGMHTDFACLLFAYLRKRPHSDTILAIVTEAVEIEKEFFSDAL 293
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QYIEFVADRLL +LG K Y V NPFD+MELIS++GK NFFEKRV +
Sbjct: 294 PVSLIGMNSSLMNQYIEFVADRLLTSLGNDKHYHVDNPFDFMELISMEGKANFFEKRVSD 353
Query: 305 YQKASV 310
Y KA+V
Sbjct: 354 YAKANV 359
>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Komagataella pastoris GS115]
gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Komagataella pastoris GS115]
gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Komagataella
pastoris CBS 7435]
Length = 400
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 253/326 (77%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FP++Y +IW+MYK+AEASFWTAEE+DL +D+ W + + +EK FI
Sbjct: 75 DEPLLVENKRRFVLFPLKYHDIWQMYKQAEASFWTAEEIDLGKDLHDWNNRMNDNEKFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSAEVQLPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+PC+ +KADWA+ WI D FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIETIPCIKEKADWAMRWISDDDALFAERLVAFAAVEGIFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L N+ SEE V+ I+ EAVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNRASEEIVEKIITEAVEIEKRYFTDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EFVADRLL ALG KVY V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVSLLGMNCSLMCQYVEFVADRLLVALGNKKVYNVNNPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+S + + F DEDF
Sbjct: 375 DYQKAGVMASTDKTSNDDAFAFDEDF 400
>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
6918VP60-T2]
Length = 322
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 258/327 (78%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EP+L + DR+ +FPIQY +IW MYKKA ASFWT EEVD+S+D++ W LT DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENLA RF EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI N
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIIN 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF+A ET+ C+ +KA+W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 LQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L++ SEERV I+KEAV IE+ F+ +
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTE 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRL+ LG K++ TNPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ V+ + ++ F +DEDF
Sbjct: 301 SDYQRMGVV-----HKQDNTFSLDEDF 322
>gi|384496849|gb|EIE87340.1| ribonucleoside-diphosphate reductase small chain [Rhizopus delemar
RA 99-880]
Length = 344
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+E +L N RFC+FPI+Y EIW+ YKKAEASFWTAEE+DLS+D WE+ ++ +E+ FI
Sbjct: 23 QEEILRENTRRFCLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDQHDWENKMSENERFFI 82
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFA SDGIV ENL F EV++ EA+ FYGFQI IENIH+E YSLL++TYIK++
Sbjct: 83 SRVLAFFAGSDGIVNENLVQNFCDEVKIPEAKCFYGFQIMIENIHAETYSLLIDTYIKDN 142
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF A +T+PC+ +KADWA WI +E+FAERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 143 QEKEMLFSAIDTIPCIKRKADWAFKWISSNESFAERLVAFAAVEGIFFSGSFASIFWLKK 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL++ +R + S++RVK I+ EAV IE+EF+ DAL
Sbjct: 203 RGLMPGLTFSNELICRDEGLHTDFACLLFTHIRKQPSQQRVKDIIVEAVGIEQEFLSDAL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRL+ ALG K+Y +NPFD+M++ISLQGKTNFFEKRV +
Sbjct: 263 PVALIGMNATLMCQYIEFVADRLMVALGFDKIYNASNPFDFMDMISLQGKTNFFEKRVSD 322
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+A VM N F +D DF
Sbjct: 323 YQRAGVM---NKTPVEKTFTLDADF 344
>gi|408673955|ref|YP_006873703.1| ribonucleotide reductase [Emticicia oligotrophica DSM 17448]
gi|387855579|gb|AFK03676.1| ribonucleotide reductase [Emticicia oligotrophica DSM 17448]
Length = 328
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 256/324 (79%), Gaps = 6/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + RF +FPI++ +IWE YKK EASFWTAEE+DLS D++ W L+ E+HFI+H
Sbjct: 10 EPLLIEDKTRFVLFPIKHNDIWEFYKKHEASFWTAEEIDLSPDLQDWAKLSDGERHFISH 69
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ VQ +EA+ FYGFQI +ENIHSE YSLL++TYIK++ E
Sbjct: 70 VLAFFAASDGIVNENLAVNFISRVQFAEAKCFYGFQIMMENIHSETYSLLIDTYIKDAVE 129
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ ++ A + +PCV KKADWAL WI+ F +RL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 RDKMLNAIDHIPCVKKKADWALKWIEQG-NFIDRLLAFAVVEGIFFSGSFCSIFWLKKRG 188
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY+ ++NK ++V +V++AVEIE+EFV DALP
Sbjct: 189 LMPGLTFSNELISRDEGLHRDFACLLYTQYIQNKYPADKVYSLVRDAVEIEKEFVTDALP 248
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYIEFVAD LL +LG K+Y NPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 249 VSLIGMNAELMCQYIEFVADHLLESLGLNKIYNAANPFDFMDMISLQGKTNFFEKRVGEY 308
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK+ VMS + F +DEDF
Sbjct: 309 QKSGVMS----QKSDMAFSLDEDF 328
>gi|452987065|gb|EME86821.1| hypothetical protein MYCFIDRAFT_49456 [Pseudocercospora fijiensis
CIRAD86]
Length = 418
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 246/310 (79%), Gaps = 2/310 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EP+L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+
Sbjct: 81 EPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERYFIS 140
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI
Sbjct: 141 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 200
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++S LF A + +PC+ KKADWAL WI D + TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 201 QRSYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAVEGIFFSGSFASIFWLKK 260
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEG+H DFACLL+S L+NK V+ I+ EAV IE+EF+ DAL
Sbjct: 261 RGLMAGLTFSNELISRDEGMHTDFACLLFSHLKNKPDASLVQSIIVEAVAIEQEFLTDAL 320
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISL GKTNFFEKRVG+
Sbjct: 321 PVMLLGMNAKLMCQYIEFVADRLLLALGNQKFYNATNPFDFMENISLGGKTNFFEKRVGD 380
Query: 305 YQKASVMSSL 314
YQKA VM +
Sbjct: 381 YQKAGVMEGI 390
>gi|384096999|ref|ZP_09998120.1| ribonucleoside-diphosphate reductase small chain, partial
[Imtechella halotolerans K1]
gi|383836967|gb|EID76367.1| ribonucleoside-diphosphate reductase small chain, partial
[Imtechella halotolerans K1]
Length = 337
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 260/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPIQ+ +IWE YKK EA FWTAEE+DL QD+ W + L+ DE++FI
Sbjct: 17 EPILQENKDRFVIFPIQHKDIWEWYKKQEACFWTAEEIDLHQDLTDWNNKLSDDERYFIK 76
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 77 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 136
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF+A E P + KKADWAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 137 EKNILFKAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ + L + +S+ER+K I+ +A+ IEREF+ ++L
Sbjct: 196 GLMPGLTFSNELISRDEGMHCDFAVHLHNNHLISPVSKERIKEIIVDALNIEREFITESL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LGC KVY VTNPFD+M++ISLQGKTNFFEKRV E
Sbjct: 256 PVSLIGMNSKLMTQYLEFVTDRLLVELGCEKVYNVTNPFDFMDMISLQGKTNFFEKRVSE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+ N GN + D DF
Sbjct: 316 YQKAGVMN--NDTEGNKI-SFDADF 337
>gi|365961083|ref|YP_004942650.1| ribonucleoside-diphosphate reductase [Flavobacterium columnare ATCC
49512]
gi|365737764|gb|AEW86857.1| ribonucleoside-diphosphate reductase [Flavobacterium columnare ATCC
49512]
Length = 325
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 258/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IWE YKK EASFWTAEE+DL QD+ W + L+ DEK+FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTKLSEDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKDDV 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A E P + KKA+WAL WI S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDQLFHAIEVFPAIKKKAEWALRWI-SSDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+++ER+ I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVTKERITEIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC K++ TNPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLIELGCAKIFNATNPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N H F +D DF
Sbjct: 304 YQKAGVM---NNEEDAHKFSLDADF 325
>gi|373108817|ref|ZP_09523098.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 10230]
gi|423129513|ref|ZP_17117188.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 12901]
gi|423133178|ref|ZP_17120825.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CIP 101113]
gi|423328773|ref|ZP_17306580.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 3837]
gi|371646062|gb|EHO11579.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 10230]
gi|371648563|gb|EHO14051.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 12901]
gi|371649234|gb|EHO14715.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CIP 101113]
gi|404604335|gb|EKB03969.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 3837]
Length = 325
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 262/326 (80%), Gaps = 6/326 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+LT N +RF +FPI++ +IW+ YKK EASFWTAEE+DL QD+ W + L DE++FI
Sbjct: 4 QEPILTENKNRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNEDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KN
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKNE 123
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+EK RLFRA E P + KKA+WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKK
Sbjct: 124 EEKDRLFRAIEVFPAIMKKAEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER++ I+ +A+ IEREF+ ++
Sbjct: 183 RGLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIREILVDALNIEREFITES 242
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLL LGC K Y V NPFD+M++ISLQGKTNFFEKRV
Sbjct: 243 LPVSLIGMNSTLMTQYLEFVTDRLLVELGCAKEYNVGNPFDFMDMISLQGKTNFFEKRVS 302
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQKA V+S GGN + D DF
Sbjct: 303 EYQKAGVISK--EEGGNKI-SFDADF 325
>gi|408684509|gb|AFU76948.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408684676|gb|AFU77114.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408684843|gb|AFU77280.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685011|gb|AFU77447.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685516|gb|AFU77949.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686019|gb|AFU78449.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686356|gb|AFU78784.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686691|gb|AFU79117.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686859|gb|AFU79284.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687195|gb|AFU79618.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687363|gb|AFU79785.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687530|gb|AFU79951.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687698|gb|AFU80118.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687866|gb|AFU80285.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408688034|gb|AFU80452.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408688203|gb|AFU80620.1| small subunit ribonucleotide reductase [Myxoma virus]
Length = 322
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 258/327 (78%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EP+L + DR+ +FPIQY +IW MYKKA ASFWT EEVD+S+D++ W LT DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENLA RF EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI +
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYAEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIID 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF+A ET+ C+ +KA+W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 LQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L++ SEERV I+KEAV IE+ F+ +
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTE 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRL+ LG K++ TNPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ V+ + ++ F +DEDF
Sbjct: 301 SDYQRMGVV-----HKQDNTFSLDEDF 322
>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
Length = 426
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/326 (65%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EEPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DL +D W E L +E++FI
Sbjct: 101 EEPLLIENTRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNEKLNNNERYFI 160
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ +LAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 161 SRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 220
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A + +PC+ KKADWAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 221 KEADFLFNAIDNIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLK 280
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L+N+ V+ I+ EAV IE+EF DA
Sbjct: 281 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPDAVIVERIITEAVTIEKEFFVDA 340
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 341 LPISLLGMNCNLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 400
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+S + ++ F DEDF
Sbjct: 401 DYQKAGVMASTTDSKSSNSFSFDEDF 426
>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
Length = 348
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/324 (66%), Positives = 251/324 (77%), Gaps = 6/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQYP++W MYKKAEASFWT EEVDLS+D WE L +E+HFI H
Sbjct: 30 EPLLRENPRRFVIFPIQYPDMWRMYKKAEASFWTVEEVDLSKDTSDWERLNDNERHFIKH 89
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+EN+HSEMYS L++TY+++S+E
Sbjct: 90 VLAFFAASDGIVNENLVERFAQEVQVAEARCFYGFQIAMENVHSEMYSTLIDTYVRSSEE 149
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K RL A ET+PCV +KA+WAL WI G E F ERL+AFA VEG+FFSGSF AIFWLKKR
Sbjct: 150 KLRLLNAIETMPCVKEKAEWALRWIAGREAAFGERLVAFAAVEGVFFSGSFAAIFWLKKR 209
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL+ L + S RV+ IV +AV IE+ F+ +ALP
Sbjct: 210 GLMPGLTFSNELISRDEGLHCDFACLLFKHLVQRPSAARVREIVTDAVAIEQRFLTEALP 269
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N MSQYIEFVADRLL L K Y NP D+M LISL+GKTNFFEK+VGEY
Sbjct: 270 VRLLGLNCETMSQYIEFVADRLLLELVGAKHYNTPNPLDFMNLISLEGKTNFFEKKVGEY 329
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM + + F +D DF
Sbjct: 330 QKFGVMFA-----KHEEFTLDADF 348
>gi|378726205|gb|EHY52664.1| ribonucleoside-diphosphate reductase small chain [Exophiala
dermatitidis NIH/UT8656]
Length = 417
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/318 (67%), Positives = 252/318 (79%), Gaps = 6/318 (1%)
Query: 2 PSIPE----EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-L 56
P+I E EP+L NP RF +FPI+Y EIW MYKKAEASFWTAEEVDLS+D+ W + L
Sbjct: 73 PTIKELEADEPILQENPHRFVLFPIKYHEIWNMYKKAEASFWTAEEVDLSKDLHDWHNRL 132
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
DE++FI+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIHSEMYSLL
Sbjct: 133 NDDERYFISHVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHSEMYSLL 192
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK++ +K+ LF A +T+PC+ KKADWAL WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 193 IDTYIKDNKQKTYLFDAIDTIPCIRKKADWALKWICDHESTFAQRLVAFAAVEGIFFSGS 252
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
F +IFWLK +GLMPGLTFSNELISRDEG+H DFACLL L++K + ++ I+ EAV I
Sbjct: 253 FASIFWLKSKGLMPGLTFSNELISRDEGMHTDFACLLIQHLKHKPDPKLIEDIITEAVAI 312
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKT 295
E+EF+ +ALP AL+GMN LM QYIEFVADRLL ALG K Y PF +ME ISL GKT
Sbjct: 313 EKEFLTEALPVALLGMNAKLMQQYIEFVADRLLVALGNKKYYHAQQPFGFMENISLGGKT 372
Query: 296 NFFEKRVGEYQKASVMSS 313
NFFEKRVG+YQKA V+SS
Sbjct: 373 NFFEKRVGDYQKAGVVSS 390
>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
gi|408685181|gb|AFU77616.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685351|gb|AFU77785.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685685|gb|AFU78117.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685854|gb|AFU78285.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686189|gb|AFU78618.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686524|gb|AFU78951.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687028|gb|AFU79452.1| small subunit ribonucleotide reductase [Myxoma virus]
Length = 322
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 258/327 (78%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EP+L + DR+ +FPIQY +IW MYKKA ASFWT EEVD+S+D++ W LT DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENLA RF EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI +
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIID 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF+A ET+ C+ +KA+W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 LQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L++ SEERV I+KEAV IE+ F+ +
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTE 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRL+ LG K++ TNPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ V+ + ++ F +DEDF
Sbjct: 301 SDYQRMGVV-----HKQDNTFSLDEDF 322
>gi|402466347|gb|EJW01856.1| hypothetical protein EDEG_03668 [Edhazardia aedis USNM 41457]
Length = 324
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 260/327 (79%), Gaps = 4/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ E LL DRF +FPI++ EIW MYKKA++ FW+AEEVDLS+D QW+ L++DE++F
Sbjct: 1 MKHEFLLEQTEDRFVLFPIKHEEIWRMYKKAQSCFWSAEEVDLSKDKEQWQLLSSDEQYF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENL RF EVQV EAR FYGFQIAIENIHSEMYSLLL+T I++
Sbjct: 61 IKHILAFFAASDGIVNENLLERFAAEVQVPEARCFYGFQIAIENIHSEMYSLLLDTLIRD 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
S+EK+ LF A +T+PC+ +KA+WAL WI D F++RL+AFACVEGIFFSG+F AIFWL
Sbjct: 121 SNEKNMLFNAIQTIPCIKRKAEWALKWISDKDSHFSKRLLAFACVEGIFFSGAFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRG+M GLTFSNELISRDEGLHC FACLLYSL NK+S+E V+GIVK+AVEIE+EF+
Sbjct: 181 KKRGIMDGLTFSNELISRDEGLHCQFACLLYSLCANKVSDEEVEGIVKDAVEIEKEFLTV 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+L L+GMN LMSQYIE+VAD L+ LG K+Y NPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 SLSVDLIGMNCKLMSQYIEYVADVLMDLLGYKKIYNTANPFDFMENISLRGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQK + ++ + F++D+DF
Sbjct: 301 SEYQKPFIGTN---EANDSTFRIDDDF 324
>gi|408491217|ref|YP_006867586.1| ribonucleotide reductase of class Ia (aerobic), beta subunit NrdF
[Psychroflexus torquis ATCC 700755]
gi|408468492|gb|AFU68836.1| ribonucleotide reductase of class Ia (aerobic), beta subunit NrdF
[Psychroflexus torquis ATCC 700755]
Length = 326
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/308 (66%), Positives = 254/308 (82%), Gaps = 3/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI +P+IWE YKK EASFWTAEE+DL QDI W++ L+ DE++FI
Sbjct: 5 EPILEENKNRFVLFPITHPDIWEWYKKCEASFWTAEEIDLQQDITDWKTKLSKDEQYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+ +
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMVENIHSETYSLLIDTYVDDDK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF+A E P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDLLFKAIENFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L N++ +ER++ I+ +A+ IEREFV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNEHLVNQVPKERIRAIIVDALTIEREFVTESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC K YG NPFD+M++ISLQGKTNFFEKRVGE
Sbjct: 244 PVSLIGMNSNLMTQYLEFVADRLLFELGCDKEYGTANPFDFMDMISLQGKTNFFEKRVGE 303
Query: 305 YQKASVMS 312
YQKA VM+
Sbjct: 304 YQKAGVMN 311
>gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
donghaensis MED134]
Length = 328
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 255/325 (78%), Gaps = 3/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFIT 65
EP+L N DRF +FPIQ+ +IWE YKK+EASFWTAEE+DL QD+ W+ LT DE++FI
Sbjct: 5 EPILAENKDRFVIFPIQHDDIWEWYKKSEASFWTAEEIDLHQDLVDWKGKLTDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A E P + KKADWAL WID S +FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDKLFNALENFPAIKKKADWALKWID-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER+ I+ A++IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERITEIIVNALDIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+E+V DRLL L C KVY NPFD+M++ISLQGKTNFFEKRVGE
Sbjct: 244 PVSLIGMNSNLMTQYLEYVTDRLLTELDCEKVYNTANPFDFMDMISLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V+ + +G D F
Sbjct: 304 YQKAGVVKDKDDDGSGQSISFDASF 328
>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
Length = 349
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/311 (66%), Positives = 248/311 (79%), Gaps = 2/311 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + RF +FPI++ +IWE YK EASFWTAEE+DL QD++ W SL E+HFI+H
Sbjct: 8 EPILEEDKGRFVLFPIKHWDIWEYYKTHEASFWTAEEIDLGQDMKDWNSLNDGERHFISH 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQ+ +ENIHSE YSLL++TYIK+ E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K RL A +T+PCV KKA+WAL WID +FAERLIAFA VEGIFFSGSFC+I+WLKKRG
Sbjct: 128 KDRLLNAIDTIPCVQKKAEWALRWIDNG-SFAERLIAFAVVEGIFFSGSFCSIYWLKKRG 186
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY+ + NKL E ++ I++ AVEIE+EFV DALP
Sbjct: 187 MMPGLTFSNELISRDEGLHRDFACMLYTDHIVNKLPESQIYDIIRNAVEIEQEFVADALP 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYI FVAD LL LG K+Y V NPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 247 VSLIGMNAELMKQYIAFVADHLLVTLGLRKMYNVANPFDFMDMISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLNG 316
Q+ VMS
Sbjct: 307 QRGEVMSKFKA 317
>gi|399925484|ref|ZP_10782842.1| ribonucleoside-diphosphate reductase small chain [Myroides
injenensis M09-0166]
Length = 325
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 261/326 (80%), Gaps = 6/326 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+LT N +RF +FPI++ +IW+ YKK EASFWTAEE+DL QD+ W + L DE++FI
Sbjct: 4 QEPILTENKNRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNEDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+KN
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKNE 123
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+EK +LFRA + P + KKADWAL WI+ SE+FAERLIAFA VEGIFFSG+FC+IFWLKK
Sbjct: 124 EEKDKLFRAIDVFPAIKKKADWALKWIE-SESFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER++ I+ A+ IEREF+ ++
Sbjct: 183 RGLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIREILVNALNIEREFITES 242
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLL LGC K Y V+NPFD+M++ISLQGKTNFFEKRV
Sbjct: 243 LPVSLIGMNAGLMTQYLEFVTDRLLVELGCEKEYNVSNPFDFMDMISLQGKTNFFEKRVS 302
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQKA V+S GGN + D DF
Sbjct: 303 EYQKAGVISK--EEGGNKI-SFDADF 325
>gi|403221091|dbj|BAM39224.1| ribonucleotide reductase R2 subunit/ribonucleoside-diphosphate
reductase small chain [Theileria orientalis strain
Shintoku]
Length = 352
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 251/325 (77%), Gaps = 18/325 (5%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE LL NP+R +FPI YP+ WE YKKA+ASFWTAEE+D S D+ W LT DE HFI+
Sbjct: 14 EEFLLNHNPNRTTLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDMVHWNKLTKDEHHFIS 73
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA +F+++V++ EA++FY FQIA+ENIHSE YSLL+E YIK+
Sbjct: 74 NVLAFFAASDGIVLENLALKFLRDVKLPEAQSFYSFQIAVENIHSETYSLLIENYIKDEA 133
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF A ET+ V KA+WA WI +FAER++A+A VEGI FSGSFCA+FWLKKR
Sbjct: 134 EKNRLFMAIETIDAVKDKANWAKKWITDDNSFAERIVAYAAVEGILFSGSFCALFWLKKR 193
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELI+RDEGLH DF C +Y L++KL +E V+ I+KEAV +ER ++CD+LP
Sbjct: 194 GLMPGLTFSNELIARDEGLHADFGCYIYQNLKHKLPQEAVQQIIKEAVVVERSYICDSLP 253
Query: 246 CALVGMNGA-------LMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ------ 292
C L+GMN LM+QYIEFVADRLL ALG VY VTNPFDWM+LIS+Q
Sbjct: 254 CDLIGMNSPLNKFFLELMTQYIEFVADRLLKALGVDPVYNVTNPFDWMDLISVQVSRVCG 313
Query: 293 -----GKTNFFEKRVGEYQKASVMS 312
GKTNFFEKRVGEYQKA +M+
Sbjct: 314 LMILKGKTNFFEKRVGEYQKAGIMA 338
>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
Length = 338
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/330 (65%), Positives = 253/330 (76%), Gaps = 7/330 (2%)
Query: 2 PSIPE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
P P+ EPLL NP RF +FPIQY ++W MYKKAEASFWT EEVDLS+D R WE L +E
Sbjct: 14 PFDPQAEPLLRENPRRFVIFPIQYSDMWSMYKKAEASFWTVEEVDLSKDTRDWERLNDNE 73
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI HVLAFFAASDGIV ENL RF +EVQV EAR FYGFQIA+EN+HSEMYS L++TY
Sbjct: 74 RHFIKHVLAFFAASDGIVNENLVERFAQEVQVVEARCFYGFQIAMENVHSEMYSTLIDTY 133
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAI 179
+++S+EK RL A ET+PCV +KA+WAL WI E TF ERL+AFA VEG+FFSGSF AI
Sbjct: 134 VRSSEEKLRLLNAIETMPCVKEKAEWALRWIASKEATFGERLVAFAAVEGVFFSGSFAAI 193
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + S RV+ IV +AV IE+ F
Sbjct: 194 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVQRPSAARVREIVTDAVAIEQRF 253
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALP L+G+N MSQYIEFVADRLL L K Y NP D+M LISL+GKTNFFE
Sbjct: 254 LTEALPVRLLGLNCETMSQYIEFVADRLLVDLIGTKHYNTANPLDFMTLISLEGKTNFFE 313
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
K+VGEYQK VM + + F +D DF
Sbjct: 314 KKVGEYQKFGVMFA-----KDDTFTLDADF 338
>gi|351712114|gb|EHB15033.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial
[Heterocephalus glaber]
Length = 334
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 256/325 (78%), Gaps = 7/325 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L DEK+FI+
Sbjct: 16 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL F +EVQV E FYGFQI IEN+HSEMYSLL++TYI++ +
Sbjct: 76 HILAFFAASDGIVNENLV--FSQEVQVPEPCCFYGFQILIENVHSEMYSLLIDTYIRDPE 133
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 134 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK +E+RV+ I+ +AV IE+EF+ +AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPAEDRVQEIIVDAVRIEQEFLTEAL 253
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 254 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 313
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 314 YQRFAVMAETTDN----VFTLDADF 334
>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/327 (65%), Positives = 253/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W++ +T +E+ FI
Sbjct: 93 DEPLLVENKRRFVLFPIKYNEIWQMYKKAEASFWTAEEIDLSKDINDWKNRMTDNERFFI 152
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL+++YIK+
Sbjct: 153 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIKDP 212
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A E +PC+ KKA+WAL WI D FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 213 KEADFLFNAIENIPCIKKKAEWALRWIADDEALFAERLVAFAAVEGIFFSGSFASIFWLK 272
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L N+ + V+ I+ EAV IE+E+ DA
Sbjct: 273 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNRPNPAIVEKIITEAVTIEKEYFTDA 332
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 333 LPASLLGMNCDLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 392
Query: 304 EYQKASVMSSLN-GNGGNHVFKMDEDF 329
+YQKA VM+ N + + F DEDF
Sbjct: 393 DYQKAGVMAQTNDASASKNAFSFDEDF 419
>gi|406603358|emb|CCH45150.1| Ribonucleoside-diphosphate reductase small chain [Wickerhamomyces
ciferrii]
Length = 421
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/326 (65%), Positives = 247/326 (75%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
+EPLL N RF +FPI+Y EIW+ YKKAEASFWTAEE+DLS+DI W E L +E+ FI
Sbjct: 96 DEPLLVENKRRFVLFPIKYHEIWQAYKKAEASFWTAEEIDLSKDIHDWNERLNDNERFFI 155
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 156 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 215
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
+ LF A ET+PC+ +KADWAL WI E F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 216 KQAEYLFNAIETIPCIKEKADWALRWIADEEALFGERLVAFAAVEGIFFSGSFASIFWLK 275
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+NK SEE V+ I+ EAV IE E+ DA
Sbjct: 276 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPSEEIVEKIITEAVSIESEYFTDA 335
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EF ADRLL ALG K Y VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 336 LPASLLGMNAKLMCQYVEFCADRLLVALGNKKFYNVTNPFDFMENISLAGKTNFFEKRVS 395
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ F DEDF
Sbjct: 396 DYQKAGVMAGTEKTESKDAFAFDEDF 421
>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
Length = 323
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 259/326 (79%), Gaps = 8/326 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+L PN +RF +FPIQ+ ++WE YKK +A FWTAEE+DL D+ W + LT DE++FI
Sbjct: 4 QEPILQPNDNRFVIFPIQHNDLWEWYKKQQACFWTAEEIDLHSDLVDWTTKLTDDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDE 123
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLFRA E P + KKADWAL WI+ SE+FAERLIAFA VEGIFFSG+FC+IFWLKK
Sbjct: 124 VEKDRLFRAIEVFPAIKKKADWALKWIE-SESFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RGL+PGLTFSNELISRDEG+HCDFA L+ + + N++ ++R+K I+ +A++IEREFV ++
Sbjct: 183 RGLLPGLTFSNELISRDEGMHCDFAVHLHNNHIVNRVPKDRIKEIIVDALDIEREFVTES 242
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLL GC KVY VTNPFD+ME+ISL+GKTNFFEKRV
Sbjct: 243 LPVSLIGMNAKLMTQYLEFVTDRLLLEFGCEKVYDVTNPFDFMEMISLEGKTNFFEKRVS 302
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQKA V S GG D DF
Sbjct: 303 EYQKAGVKS-----GGTGSISFDSDF 323
>gi|448513504|ref|XP_003866973.1| Rnr21 ribonucleoside-diphosphate reductase [Candida orthopsilosis
Co 90-125]
gi|380351311|emb|CCG21535.1| Rnr21 ribonucleoside-diphosphate reductase [Candida orthopsilosis
Co 90-125]
Length = 422
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/326 (66%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EEPLL N R+ MFPI+Y EIW+MYKKAEASFWTAEE+DL +D+ W E L +E+ FI
Sbjct: 98 EEPLLKENTRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDLHDWREKLNDNERFFI 157
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+LAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIK+
Sbjct: 158 GRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 217
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + KKADWA+ WI SE FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 218 KEADFLFNAIETIPQIKKKADWAIRWIQDSEALFAERLVAFAAVEGIFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+++ + V+ I+ EAVEIE+EF DA
Sbjct: 278 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQHRPDPKIVERIITEAVEIEKEFFTDA 337
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 338 LPVSLLGMNCKLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 398 DYQKAGVMAKSENKDAN-AFAFDEDF 422
>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
Length = 312
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/263 (79%), Positives = 231/263 (87%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEEVDLS D++QWESL+ EKHFI+HVLAFFAASDGIVLENLAARF+ +
Sbjct: 1 MYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHD 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIK+S EK RLF A E++ CVA KA WAL+
Sbjct: 61 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALD 120
Query: 150 WIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
WI S FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 180
Query: 210 CLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLG 269
CLLYSLL+ +L ++V IV EAVEIE +FVC+ALPCAL+GMN LMSQYI+FVADRLL
Sbjct: 181 CLLYSLLQKQLPWQKVHHIVHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLV 240
Query: 270 ALGCGKVYGVTNPFDWMELISLQ 292
ALG + Y V NPFDWME ISLQ
Sbjct: 241 ALGYERKYNVENPFDWMEFISLQ 263
>gi|449549663|gb|EMD40628.1| hypothetical protein CERSUDRAFT_121331 [Ceriporiopsis subvermispora
B]
Length = 425
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/336 (65%), Positives = 251/336 (74%), Gaps = 10/336 (2%)
Query: 4 IPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADE 60
+PE EPLL + RF +FPIQY EIW YKKAEASFWTAEE+DLS D WE L +E
Sbjct: 90 LPEHMEPLLMDSKRRFVLFPIQYHEIWRFYKKAEASFWTAEEIDLSHDHWDWEHKLNDNE 149
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 150 RWFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 209
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK E+ LF A ETVPC+ KKADWAL WI D TFAERL+AFA VEGIFFSGSF +I
Sbjct: 210 IKEQHEREHLFDAIETVPCIKKKADWALRWISDKQSTFAERLVAFAAVEGIFFSGSFASI 269
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR + V I+ EAV IE+EF
Sbjct: 270 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFQHLRRRPHPSVVLKIIAEAVAIEQEF 329
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALP AL+GMN LM QYIEFVADRLL +LG K Y NPFD+M+LISLQGKTNFFE
Sbjct: 330 LTDALPVALIGMNAPLMCQYIEFVADRLLVSLGNEKHYNSPNPFDFMDLISLQGKTNFFE 389
Query: 300 KRVGEYQKASVMSSLNGNG------GNHVFKMDEDF 329
KRV +Y KA+ +++ N + F +DEDF
Sbjct: 390 KRVSDYSKANFQRAMSDNDVSTEATTSRAFTLDEDF 425
>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
Length = 330
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 259/327 (79%), Gaps = 4/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFI 64
+EP+L NPDRF +FPIQ+ ++WE YKK +A WTAEE+DL DI W+ SL +DE++FI
Sbjct: 5 QEPILQENPDRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDITDWQNSLNSDERYFI 64
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDD 124
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK +LFRA E P + KADWA+ WI+ S +FAERLIAFA VEGIFFSG+FC+I+WLKK
Sbjct: 125 AEKDQLFRAIENFPAIKLKADWAMKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKK 183
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER+ I+ +A+ IEREF+ ++
Sbjct: 184 RGLMPGLTFSNELISRDEGMHCDFAVHLHNHHLVNKVPKERITEIIVDALNIEREFITES 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLLG L C VY VTNPFD+M+LI ++GKTNFFEKRVG
Sbjct: 244 LPASLIGMNAKLMTQYLEFVTDRLLGELECDPVYNVTNPFDFMDLIGMEGKTNFFEKRVG 303
Query: 304 EYQKASVMSSLNGNGGN-HVFKMDEDF 329
EYQKA VM+S + + F +D DF
Sbjct: 304 EYQKAGVMNSTKDDKSSMDSFSLDADF 330
>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
Length = 326
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IWE YKK+EASFWTAEE+DL QD+ W + L DE++FI
Sbjct: 6 EPILQENKDRFVIFPIKHADIWEWYKKSEASFWTAEEIDLHQDLTDWTTKLNDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF+A E P + KKADWAL WI+ S +FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 126 EKDKLFKAIENFPAIKKKADWALQWIE-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
G+MPGLTFSNELISRDEG+HCDFA L+ + L NK+ +ER++ I+ +A+ IEREF+ ++L
Sbjct: 185 GIMPGLTFSNELISRDEGVHCDFAVHLHNNHLVNKVPKERIRAIIVDALNIEREFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LGC K Y V+NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLLQELGCEKEYNVSNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V LN F D DF
Sbjct: 305 YQKAGV---LNKEEEKDKFSFDADF 326
>gi|381187133|ref|ZP_09894698.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacterium frigoris PS1]
gi|379650743|gb|EIA09313.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacterium frigoris PS1]
Length = 325
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 258/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI++ +IWE YK EASFWTAEE+DLSQD+ W + L DE++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNKLNDDERYFVK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDDA 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A E P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDQLFNALEVFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER++GI+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIRGIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC + Y TNPFD+M++ISLQGKTNFFEK+V E
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLVELGCDREYNTTNPFDFMDMISLQGKTNFFEKKVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VM N +G D DF
Sbjct: 304 YQKSGVM---NTDGDAQKISFDADF 325
>gi|392574724|gb|EIW67859.1| hypothetical protein TREMEDRAFT_44873 [Tremella mesenterica DSM
1558]
Length = 405
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/331 (63%), Positives = 259/331 (78%), Gaps = 8/331 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL RF +FPI+Y EIW+MYK+A+ASFWT+EE++L+ D+ WE+ L +E++FI
Sbjct: 76 DEPLLKETTSRFVLFPIKYREIWQMYKQAQASFWTSEEINLAPDLHDWENKLNDNERYFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ +EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 EHVLAFFAASDGIVNENLVERFSAEVQAAEAKCFYGFQIMMENIHSETYSLLIDTYIKDV 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
D ++ LF A +T+PC+ KKADWAL WI D TFAERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 196 DRRNYLFEAIDTIPCIRKKADWALRWITDTRSTFAERLIAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + V+ I++EAV+IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPSTVEKIIREAVKIEQEFLTDA 315
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K++ V+NPFD+ME+ISLQGK NFFE RV
Sbjct: 316 LPVSLIGMNAKLMCQYIEFVADRLLVALGNDKIWNVSNPFDFMEMISLQGKANFFESRVS 375
Query: 304 EYQKASVMSSLNGNGGNHV-----FKMDEDF 329
Y K+ V S+ G+ +H F +D+DF
Sbjct: 376 AYSKSGVNQSV-GSTTDHQAVKKGFSLDDDF 405
>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
Length = 418
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 254/328 (77%), Gaps = 4/328 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + L E+ FI
Sbjct: 91 EEPLLLESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDSERFFI 150
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL RF EVQV+EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 151 SRVLAFFAASDGIVNENLLERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 210
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ LF A ET+PC+ +KA+WAL WI D F ERL+AFA VEGIFFSGSF +IFW+K
Sbjct: 211 VERDFLFDAIETIPCIKRKAEWALRWISDEHSVFGERLVAFAAVEGIFFSGSFASIFWMK 270
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL FSNELISRDEG+H DFACLL+S LR + + V+ I+KEAV IE+EF+ DA
Sbjct: 271 KRGLMPGLAFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVERIIKEAVAIEQEFLTDA 330
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K+Y TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 331 LPVSLIGMNATLMCQYIEFVADRLLVALGNKKLYNSTNPFDFMDMISLQGKTNFFEKRVS 390
Query: 304 EYQKASVMSSLNGNG--GNHVFKMDEDF 329
+Y KA V S + + F +DEDF
Sbjct: 391 DYSKAGVNHSGDNTTTQASKTFVLDEDF 418
>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
Length = 352
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/352 (61%), Positives = 256/352 (72%), Gaps = 33/352 (9%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+SL +EKHFI+H
Sbjct: 5 EPLLQENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDSLKPEEKHFISH 64
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR+FY +Q+ IE++HSEMYSLL+ TYI++ E
Sbjct: 65 VLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSYQVLIESVHSEMYSLLINTYIRDLKE 124
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A T+PCV +KADWAL WI D + TF ERL+AFA VEGIFFSGSF +I+WLKKR
Sbjct: 125 REHLFNAIYTMPCVKRKADWALQWINDSTSTFGERLVAFAAVEGIFFSGSFASIYWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIER-------- 237
GLMPGLT+SNELISRDEGLHC FACLLYS L K SE+RVK I+ +AV IE+
Sbjct: 185 GLMPGLTYSNELISRDEGLHCTFACLLYSYLVKKPSEDRVKDIITKAVSIEQVGGSYRSM 244
Query: 238 --------------------EFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVY 277
EF+ +ALP L+GMN LM QYIEFVADRL LG K+Y
Sbjct: 245 DGNKPNREVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMY 304
Query: 278 GVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
NPFD+ME ISL+GKTNFFEKRV EYQ+ +MSS + F +D DF
Sbjct: 305 NAENPFDFMEAISLEGKTNFFEKRVAEYQRFGIMSS----PVDSEFTLDADF 352
>gi|448118274|ref|XP_004203456.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|448120689|ref|XP_004204039.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|359384324|emb|CCE79028.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|359384907|emb|CCE78442.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
Length = 425
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/325 (65%), Positives = 249/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DL +D W++ + +E+ FI+
Sbjct: 101 EPLLVENKRRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLGKDTHDWQNKMNENERFFIS 160
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+LAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 161 RILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPK 220
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A E +PC+ KKADWAL WI D F ERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 221 EADFLFNAIENIPCIQKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLKK 280
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL+S L N+ + E V+ I+ EAV IE+EF DAL
Sbjct: 281 RGLMPGLTFSNELICRDEGLHTDFACLLFSHLENRPNPEIVEKIITEAVGIEKEFFTDAL 340
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QY+EFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV +
Sbjct: 341 PVSLLGMNAKLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVSD 400
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+ + + + F D+DF
Sbjct: 401 YQKAGVMAKASDSKVDTSFSFDDDF 425
>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
morsitans]
Length = 396
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/317 (66%), Positives = 249/317 (78%), Gaps = 3/317 (0%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EPLL NP RF +FPIQYPEIW+MYKKAEASFWTAEEVDLS+D+ W L+ E+
Sbjct: 74 PSI--EPLLKENPKRFVIFPIQYPEIWKMYKKAEASFWTAEEVDLSKDMDDWNRLSDGER 131
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYSLL+ETYI
Sbjct: 132 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSLLIETYI 191
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+ E+ LF A ET+P V KKA+WAL WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 192 MDEKEREYLFNAIETMPLVKKKAEWALAWISSHSANFGERIIAFAAVEGIFFSGSFASIF 251
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRG+MPGLTFSNE+ISRDEGLHC+FA L++ L K S+ER+ I+ +AV+IE+EF+
Sbjct: 252 WLKKRGIMPGLTFSNEMISRDEGLHCEFAVLMFKHLIQKPSKERILEIITDAVKIEKEFL 311
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN M +YIE+VADRLL L GK Y NPF++M IS+ GKTNFFEK
Sbjct: 312 TEALPVDLIGMNSESMCKYIEYVADRLLLELDVGKYYLAENPFEFMNKISIDGKTNFFEK 371
Query: 301 RVGEYQKASVMSSLNGN 317
RVGEYQK V S + N
Sbjct: 372 RVGEYQKIGVSSDDDQN 388
>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
Length = 422
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/315 (66%), Positives = 249/315 (79%), Gaps = 2/315 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD-EKHFI 64
EEPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W + D E+HFI
Sbjct: 85 EEPLLKESKRRFVLFPIQYNEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNERHFI 144
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL+++YIK+
Sbjct: 145 SHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDSYIKDP 204
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A ET+PC+ +KA+WAL WI D TFAERL+AFA VEGIFFSGSF +IFW+K
Sbjct: 205 AQREYLFDAIETIPCIKRKAEWALKWISDQESTFAERLVAFAAVEGIFFSGSFASIFWMK 264
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E VK I+ EAV+IE+EF+ DA
Sbjct: 265 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVKHIIVEAVKIEQEFLTDA 324
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QYIEFVADRLL +LG K Y TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 325 LPVKLIGMNADLMCQYIEFVADRLLVSLGNEKHYNKTNPFDFMDMISLQGKTNFFEKRVS 384
Query: 304 EYQKASVMSSLNGNG 318
+Y KA + S +
Sbjct: 385 DYSKAGINHSSTSDN 399
>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
Length = 325
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/309 (66%), Positives = 253/309 (81%), Gaps = 3/309 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI++ +IWE YKK EASFWTAEE+DL QD+ W + LT DEK+FI
Sbjct: 5 EPILQENENRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTKLTEDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDDV 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF+A E P + KKADWAL WID S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDRLFKAIEVFPAIKKKADWALRWID-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ R+K I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPPARIKEILLDALTIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LG K + VTNPFD+M++ISLQGKTNFFEKRVGE
Sbjct: 244 PISLIGMNAKLMTQYLEFVTDRLLQELGLEKEFNVTNPFDFMDMISLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSS 313
YQKA V++S
Sbjct: 304 YQKAGVLNS 312
>gi|354546840|emb|CCE43572.1| hypothetical protein CPAR2_212160 [Candida parapsilosis]
Length = 422
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/326 (65%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EEPLL N R+ MFPI+Y EIW+MYKKAEASFWTAEE+DL +D+ W E L +E+ FI
Sbjct: 98 EEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDLHDWREKLNDNERFFI 157
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+LAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIK+
Sbjct: 158 GRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 217
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + KKADWA+ WI S+ FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 218 KEADFLFNAIETIPQIKKKADWAIRWIQDSDALFAERLVAFAAVEGIFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+++ + V+ I+ EAVEIE+EF DA
Sbjct: 278 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQHRPDPKIVERIITEAVEIEKEFFTDA 337
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 338 LPVSLLGMNCKLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 398 DYQKAGVMAKSENKDAND-FAFDEDF 422
>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
Length = 418
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/329 (65%), Positives = 251/329 (76%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N RF MFPI+Y EIW+MYKKAEASFWTAEE+DL +D+ W + L +E++FI
Sbjct: 90 EEPLLMENTRRFVMFPIKYHEIWKMYKKAEASFWTAEEIDLGKDMHDWNNRLNDNERYFI 149
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ +LAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 150 SRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 209
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A E +PC+ KKADWAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 210 KEADFLFNAIENIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLK 269
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELI RDEGLH DFACLL+S L+N+ E V+ I+ EAV+IE+EF DA
Sbjct: 270 KRGLMPGLSFSNELICRDEGLHTDFACLLFSHLQNRPDPEIVEKIITEAVDIEKEFFTDA 329
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 330 LPISLLGMNCKLMCQYVEFVADRLLVALGNKKIYNVANPFDFMENISLAGKTNFFEKRVS 389
Query: 304 EYQKASVMSSLNGNGGNHV---FKMDEDF 329
+YQKA VM+ N + V F DEDF
Sbjct: 390 DYQKAGVMAKSNADANAPVADAFAFDEDF 418
>gi|378754645|gb|EHY64675.1| ribonucleoside-diphosphate reductase, beta subunit [Nematocida sp.
1 ERTm2]
Length = 334
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/328 (65%), Positives = 258/328 (78%), Gaps = 8/328 (2%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S PEEP+LT + +RF +FPI++ +IW +YK A A FWTAEEVDLS+D W++L +E+H
Sbjct: 14 SRPEEPILTESNNRFVIFPIEHHDIWALYKDAVAVFWTAEEVDLSKDQADWDNLNNNERH 73
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI++VLAFFAASDGIV ENL RF EVQ+SEAR FYGFQI IENIH+EMYSLL++TYIK
Sbjct: 74 FISYVLAFFAASDGIVNENLVERFASEVQISEARCFYGFQIMIENIHAEMYSLLIDTYIK 133
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
++ EK+ LF+A E +P + KKADWAL WI D +FA+RL+AFACVEGIFFSGSF +IFW
Sbjct: 134 DTAEKNFLFQAIENIPVIKKKADWALRWISDKEASFADRLVAFACVEGIFFSGSFASIFW 193
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACLL+S L NK E + IV EAVEIE+EF+
Sbjct: 194 LKKRGLMPGLTFSNELISRDEGLHCDFACLLHSHLVNKC--ENISKIVLEAVEIEKEFLT 251
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP +L+G+N M QYIEFVADRLL AL K++ NPFD+MELISL+ K NFFE R
Sbjct: 252 DALPVSLIGINADTMCQYIEFVADRLLLALNEEKIFNAQNPFDFMELISLRRKANFFEMR 311
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEY++ASV G F M++DF
Sbjct: 312 VGEYKRASV-----GAPQTQGFAMNDDF 334
>gi|399033617|ref|ZP_10732239.1| ribonucleotide reductase, beta subunit [Flavobacterium sp. CF136]
gi|398068052|gb|EJL59513.1| ribonucleotide reductase, beta subunit [Flavobacterium sp. CF136]
Length = 325
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 260/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI++ +IWE YKK EASFWTAEE+DL QD+ W + L+ +E++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLSDEERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF A E P + KKA+WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKAELFNALEVFPAIKKKAEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+S+ER+K I+ +A++IEREFV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVSKERIKEIIVDALDIEREFVTESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC +VYG NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAGLMTQYLEFVADRLLVELGCDRVYGSANPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VM N + D DF
Sbjct: 304 YQKSGVM---NTDSDAQKISFDADF 325
>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
Length = 397
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 256/328 (78%), Gaps = 4/328 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEP+L N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W++ +T E+HF+
Sbjct: 70 EEPILKENKGRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLYDWDNRMTDPERHFV 129
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYI+
Sbjct: 130 SHVLAFFAASDGIVNENLVERFSAEVQATEARCFYGFQIMMENIHSETYSLLIDTYIREP 189
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ + LF A ETVP V +KADWAL WI D +F+ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 190 ERRDFLFNAIETVPVVKQKADWALRWISDHRASFSERLVAFAAVEGIFFSGSFASIFWLK 249
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S L+ + + V I+ EAV+IE++F+ DA
Sbjct: 250 KRGLMPGLSFSNELISRDEGLHTDFACLLFSHLKKRAHPDTVNRIITEAVDIEQDFLTDA 309
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K Y TNPFD+ME ISLQGK+NFFE+RVG
Sbjct: 310 LPVSLIGMNARLMCQYIEFVADRLLVALGNPKHYNSTNPFDFMENISLQGKSNFFERRVG 369
Query: 304 EYQKASVMSSLN--GNGGNHVFKMDEDF 329
+Y KA V + + G + F + EDF
Sbjct: 370 DYAKAGVARADDETPTQGTNEFSLSEDF 397
>gi|347535523|ref|YP_004842948.1| ribonucleoside-diphosphate reductase subunit beta [Flavobacterium
branchiophilum FL-15]
gi|345528681|emb|CCB68711.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
branchiophilum FL-15]
Length = 325
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/309 (65%), Positives = 252/309 (81%), Gaps = 3/309 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFIT 65
EP+L N +RF +FPI++ +IW MYK EASFWTAEE+DLSQD+ W L +E++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWNMYKSMEASFWTAEEIDLSQDLTDWNFKLNNEERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEI 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF A + P + KKADWAL WI S++FAERLIAFA VEGIFFSG+FCAI+WLKKR
Sbjct: 125 EKDELFHALDVFPAIKKKADWALKWI-TSDSFAERLIAFAAVEGIFFSGAFCAIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLT+SNELISRDEG+HCDFA L++ L NK+S++R+ I+ A++IEREF+ ++L
Sbjct: 184 GLMPGLTYSNELISRDEGVHCDFAVHLHNNHLVNKVSKQRITEIITNALDIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN ALM+QY+EFVADRLL LGC +VY TNPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAALMTQYLEFVADRLLVELGCDRVYHTTNPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSS 313
YQKA VM++
Sbjct: 304 YQKAGVMNT 312
>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
brasiliensis Pb18]
Length = 325
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/318 (68%), Positives = 251/318 (78%), Gaps = 16/318 (5%)
Query: 26 EIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVLENLAA 84
+IW+MYKKAEASFWTAEEVDLS+D+ W + L DE++FI+HVLAFFAASDGIV ENL
Sbjct: 10 QIWQMYKKAEASFWTAEEVDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVE 69
Query: 85 RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKA 144
RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK +++ LF A +T+PC+ KKA
Sbjct: 70 RFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKA 129
Query: 145 DWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 203
DWA+ WI+ E TFA+RL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG
Sbjct: 130 DWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEG 189
Query: 204 LHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFV 263
LH DFACLL+S LR++ S E V+ I+ EAV IE+EF+ DALPCAL+GMN LM QYIEFV
Sbjct: 190 LHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMNAKLMCQYIEFV 249
Query: 264 ADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL--------- 314
ADRLL ALG KVY TNPFD+M+ ISL GKTNFFEKRVG+YQKA VM+S
Sbjct: 250 ADRLLVALGNKKVYNSTNPFDFMDNISLTGKTNFFEKRVGDYQKAGVMASTKKEAASDDA 309
Query: 315 ---NGNGGNHVFKMDEDF 329
N NGG F DEDF
Sbjct: 310 EQQNENGG--AFTFDEDF 325
>gi|387592558|gb|EIJ87582.1| ribonucleotide reductase small subunit RnrA [Nematocida parisii
ERTm3]
gi|387595184|gb|EIJ92809.1| ribonucleotide reductase small subunit RnrA [Nematocida parisii
ERTm1]
Length = 343
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 254/324 (78%), Gaps = 8/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + +RF +FPI++ +IW MYK A A FWTAEEVDLS D WE L A+E+HFI++
Sbjct: 27 EPILQESNNRFVIFPIEHHDIWAMYKDAVAVFWTAEEVDLSNDQADWEKLNANERHFISY 86
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+SEAR FYGFQI IENIH+EMYSLL++TYIK++ E
Sbjct: 87 VLAFFAASDGIVNENLVERFASEVQISEARCFYGFQIMIENIHAEMYSLLIDTYIKDTAE 146
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF+A E +P + KKADWAL WI D +FA+RL+AFACVEGIFFSGSF +IFWLKKR
Sbjct: 147 KNFLFQAMENIPVIKKKADWALRWISDKESSFADRLVAFACVEGIFFSGSFASIFWLKKR 206
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL+S L NK + +K IV EAVEIE+EF+ DALP
Sbjct: 207 GLMPGLTFSNELISRDEGLHCDFACLLHSHLINKC--KNIKKIVLEAVEIEKEFLTDALP 264
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N M QYIEFVADRLL AL KVY NPFD+MELISL+ K NFFE RVGEY
Sbjct: 265 VSLIGINSDSMCQYIEFVADRLLIALNEEKVYNTPNPFDFMELISLRRKANFFEMRVGEY 324
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
++ASV G F MD+DF
Sbjct: 325 KRASV-----GAPQAQGFAMDDDF 343
>gi|377830065|ref|YP_005296225.1| unnamed protein product [Cotia virus SPAn232]
gi|377814308|gb|AFB76927.1| ribonucleotide reductase small subunit [Cotia virus SPAn232]
Length = 331
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 252/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L + DRF +FPIQ+ +IW MYK+A ASFWT +EVDLS+DI W+ L+ DE+HFI +
Sbjct: 12 EYILKESSDRFVIFPIQHNDIWTMYKRALASFWTVDEVDLSKDINDWKKLSNDERHFIKY 71
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF +VQ+SEAR FYGFQIAIENIHSEMYSLL++TYI +S+E
Sbjct: 72 VLAFFAASDGIVNENLAKRFFNDVQLSEARCFYGFQIAIENIHSEMYSLLIDTYITDSEE 131
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ L +A ET+ CV KADW WI D S TF RL+AFA VEGIFFSGSF AIFW+KKR
Sbjct: 132 KNFLLKAIETIECVKLKADWTKKWISDYSSTFGTRLVAFAAVEGIFFSGSFAAIFWIKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL+ L+ +EE + IVK+AV IE+ F+ DA+P
Sbjct: 192 GLMPGLTFSNELISRDEGLHCDFACLLFKYLKYPPTEEVIVNIVKDAVIIEKLFLQDAIP 251
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N LM +YIEFVADRLL L C +Y +NPFD+ME ISL+GKTNFFE+RVGEY
Sbjct: 252 VKLIGINYELMCKYIEFVADRLLKELSCSTIYNTSNPFDFMENISLEGKTNFFERRVGEY 311
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM+S F +DEDF
Sbjct: 312 QKMGVMNS----NKEIKFTLDEDF 331
>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
ribonucleotide reductase r2 subunit 1, putative;
ribonucleotide reductase small subunit 1, putative
[Candida dubliniensis CD36]
gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
[Candida dubliniensis CD36]
Length = 413
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N R+ MFPI+Y EIW YKKAEASFWTAEE+DLS+D+ W + L +E++F+
Sbjct: 89 EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERYFV 148
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIK+
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 208
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A +PC+ KKADWA+ WI E + ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 209 QEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFWLK 268
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+N+ S E V+ I+ EAV++E+E+ DA
Sbjct: 269 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVEKIITEAVDVEKEYFTDA 328
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 329 LPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 388
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ + F DEDF
Sbjct: 389 DYQKAGVMAKTENKEAD-AFTFDEDF 413
>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides sp.
'lutzii' Pb01]
Length = 325
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 251/318 (78%), Gaps = 16/318 (5%)
Query: 26 EIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVLENLAA 84
+IW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI+HVLAFFAASDGIV ENL
Sbjct: 10 QIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVE 69
Query: 85 RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKA 144
RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK +++ LF A +T+PC+ KKA
Sbjct: 70 RFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKA 129
Query: 145 DWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 203
DWA+ WI+ E TFA+RL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG
Sbjct: 130 DWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEG 189
Query: 204 LHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFV 263
LH DFACLL+S LR++ S E V+ I+ EAV IE+EF+ DALPCAL+GMN LM QYIEFV
Sbjct: 190 LHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMNAKLMCQYIEFV 249
Query: 264 ADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL--------- 314
ADRLL ALG KVY TNPFD+M+ ISL GKTNFFEKRVG+YQKA VM+S
Sbjct: 250 ADRLLVALGNKKVYNSTNPFDFMDNISLTGKTNFFEKRVGDYQKAGVMASTKKEAASEDA 309
Query: 315 ---NGNGGNHVFKMDEDF 329
N NGG F DEDF
Sbjct: 310 EQQNENGG--AFTFDEDF 325
>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
Length = 417
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/329 (65%), Positives = 253/329 (76%), Gaps = 6/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y E+W+MYKKAEASFWTAEE+DLS+DI W + L +E+ FI
Sbjct: 90 DEPLLMENTRRFVLFPIKYNEVWQMYKKAEASFWTAEEIDLSKDITDWNNRLNDNERFFI 149
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ +LAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL+++YIK+
Sbjct: 150 SRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIKDP 209
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A + +PC+ KKADWAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 210 KEADFLFNAIDNIPCIRKKADWALRWISDDDALFGERLVAFAAVEGIFFSGSFASIFWLK 269
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL+S L+N+ E V+ I+ EAV+IE+EF DA
Sbjct: 270 KKGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPDAEIVEKIITEAVKIEKEFFTDA 329
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 330 LPSSLLGMNAELMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 389
Query: 304 EYQKASVMS---SLNGNGGNHVFKMDEDF 329
+YQKA VM+ S N N+ F DEDF
Sbjct: 390 DYQKAGVMAKSGSDNKTPSNN-FSFDEDF 417
>gi|260061082|ref|YP_003194162.1| ribonucleoside-diphosphate reductase small chain [Robiginitalea
biformata HTCC2501]
gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
[Robiginitalea biformata HTCC2501]
Length = 328
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/329 (63%), Positives = 256/329 (77%), Gaps = 4/329 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEK 61
S EEP+L N DRF +FPIQ+ ++WE YKK EA FWTAEE+DL QD+ W + L+ DEK
Sbjct: 2 SAAEEPILKENKDRFVIFPIQHHDLWEWYKKCEACFWTAEEIDLHQDLSDWNNKLSDDEK 61
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYV 121
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
K+ EK+ LF+A E P + KKADWAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFW
Sbjct: 122 KDEKEKNVLFQAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFW 180
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFV 240
LKKRGLMPGLTFSNELISRDEG+HCD+A L+ + L NK+ +ER+ I+ A++IEREF+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHCDYAVHLHNNHLVNKVPKERITQIITNALDIEREFI 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
++LP +L+GMN LM+QY+EFV DRLL L C KVY TNPFD+M++ISLQGKTNFFEK
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLVELECEKVYNSTNPFDFMDMISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RV EYQKA VM+ + D DF
Sbjct: 301 RVSEYQKAGVMNKEKDTDSQKI-SFDADF 328
>gi|221120499|ref|XP_002159812.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Hydra magnipapillata]
Length = 387
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 248/312 (79%), Gaps = 2/312 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFI 64
+EPLL NP RF +FPIQY +IW+MYK+AEASFWT EEVDL+ D WE L EK+FI
Sbjct: 59 DEPLLRENPRRFVLFPIQYKDIWKMYKQAEASFWTVEEVDLAADAVHWEEKLKPQEKYFI 118
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL F +EVQ+ EARAFYGFQIAIENIHSEMYSLL++T IK+
Sbjct: 119 SHVLAFFAASDGIVNENLVECFSQEVQLPEARAFYGFQIAIENIHSEMYSLLIDTLIKDP 178
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EKS LF A ET+PCV KKA WAL WI+ +F+ER++AFA VEGIFFSGSF AIFWLK
Sbjct: 179 IEKSNLFNAIETMPCVQKKAVWALKWINKDCASFSERVVAFAAVEGIFFSGSFAAIFWLK 238
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KR L+PG+TFSNELISRDEGLHCDFACL+Y + NK SEERVK I+++AV IE EF+ ++
Sbjct: 239 KRNLLPGVTFSNELISRDEGLHCDFACLMYKHIVNKPSEERVKQIIRDAVAIEIEFLTES 298
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN +LM YIEF ADRL+ ALG K + V NPFD+ME ISL K NFFE RV
Sbjct: 299 LPCDLLGMNKSLMKTYIEFCADRLINALGYSKEWNVENPFDFMENISLARKANFFESRVS 358
Query: 304 EYQKASVMSSLN 315
+YQKA VM S+N
Sbjct: 359 DYQKAGVMDSIN 370
>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
Length = 400
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 248/326 (76%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL +PDR +FPI+Y EIW+ YK+AEASFWTAEE+DLS+D+ W + L +E+ FI
Sbjct: 75 DEPLLNDDPDRLTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRLNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F E + EA+AFYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEAVIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI SE FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIANSEALFAERLVAFAAIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L +K E V+ IV EAVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLNHKPDPEVVERIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G KVY V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNAQLMNQYVEFVADRLLVAFGNKKVYNVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VMS G F +DEDF
Sbjct: 375 DYQKAGVMSKAQNTEGGGAFSLDEDF 400
>gi|426198205|gb|EKV48131.1| hypothetical protein AGABI2DRAFT_116955 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/329 (63%), Positives = 249/329 (75%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFI 64
+EPLL + RF +FPIQYPEIW YKKA+ASFWT EE+DLS DI W L DE+ FI
Sbjct: 37 QEPLLKESQRRFVLFPIQYPEIWRYYKKAQASFWTVEEIDLSHDITDWAYRLNKDERRFI 96
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV+EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 97 SHILAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 156
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
DE+ LF A ET+P + +KA WAL WI +FAERL+AFA VEG+FFSGSF AIFW+K
Sbjct: 157 DERKHLFDAVETIPTIKRKAVWALRWISSRGLSFAERLVAFAAVEGVFFSGSFAAIFWIK 216
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI+RDEG+H DFACLL++ LR + RV I+ EAV IE++F DA
Sbjct: 217 KRGLMPGLTFSNELITRDEGMHTDFACLLFTHLRRRPHPNRVLEIITEAVAIEKDFFGDA 276
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM QYIEFVADRLL +LG K Y TNPFD+ME+ISLQGK NFFEKRV
Sbjct: 277 LPVALIGMNSKLMCQYIEFVADRLLVSLGNAKYYHATNPFDFMEMISLQGKANFFEKRVS 336
Query: 304 EYQKASVMSS---LNGNGGNHVFKMDEDF 329
EY +A + S L+ + +F ++DF
Sbjct: 337 EYARAHINHSSPELSSKHTHRIFTTEDDF 365
>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 413
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N R+ MFPI+Y EIW YKKAEASFWTAEE+DLS+D+ W + L +E++FI
Sbjct: 89 EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERYFI 148
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIK+
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 208
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A +PC+ KKADWA+ WI E + ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 209 QEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFWLK 268
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+N+ S E V+ I+ EAV++E+E+ DA
Sbjct: 269 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVERIITEAVDVEKEYFTDA 328
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KVY VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 329 LPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 388
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ + F DEDF
Sbjct: 389 DYQKAGVMAKTENKEAD-AFTFDEDF 413
>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
cuniculus]
Length = 400
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/318 (67%), Positives = 252/318 (79%), Gaps = 5/318 (1%)
Query: 13 NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFA 72
NP RF + I+ IW KK EASFWTAEEVDLS+DI+ WE+L +E++FI+HVLAFFA
Sbjct: 87 NPCRFSILTIESYGIWTRNKKGEASFWTAEEVDLSKDIQHWEALKEEERYFISHVLAFFA 146
Query: 73 ASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
ASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF
Sbjct: 147 ASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFN 206
Query: 133 AFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGL
Sbjct: 207 AIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGL 266
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
TFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+ +ALP L+GM
Sbjct: 267 TFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGM 326
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N ALM QYIEFVADRLL LG KV+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VM
Sbjct: 327 NCALMKQYIEFVADRLLLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVM 386
Query: 312 SSLNGNGGNHVFKMDEDF 329
SS N F +D DF
Sbjct: 387 SSPTENS----FTLDADF 400
>gi|395802146|ref|ZP_10481399.1| ribonucleoside-diphosphate reductase [Flavobacterium sp. F52]
gi|395435387|gb|EJG01328.1| ribonucleoside-diphosphate reductase [Flavobacterium sp. F52]
Length = 325
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 258/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI++ +IWE YKK EASFWTAEE+DL QD+ W + L DE++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF A E P +AKK +WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKTELFNALEVFPAIAKKGEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER+K I+ +A++IER+F+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIKEIIVDALDIERQFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC +VYG NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNATLMTQYLEFVADRLLIELGCERVYGSANPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VM N + D DF
Sbjct: 304 YQKSGVM---NNDSDAQKISFDADF 325
>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
Length = 325
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 258/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI++ +IWE YKK EASFWTAEE+DL QD+ W + L DE++FI
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF A E P +AKK +WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKTELFNALEVFPAIAKKGEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER+K I+ +A++IER+FV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIKEIIVDALDIERQFVTESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC +VYG NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAGLMTQYLEFVADRLLVELGCERVYGSANPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VM N + D DF
Sbjct: 304 YQKSGVM---NTDSDAQKISFDADF 325
>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
Length = 426
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/311 (69%), Positives = 248/311 (79%), Gaps = 4/311 (1%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQ-DIRQW-ESLTADEK 61
PE EPLL P+RF +FPIQYP+IWEMYKKA ASFWT EEV L + D + W E L +DEK
Sbjct: 97 PELEPLLQEGPNRFVIFPIQYPDIWEMYKKAVASFWTIEEVPLHKLDKKDWDEKLNSDEK 156
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EV+++EAR FYGFQIAIENIHSEMYSLL+ETYI
Sbjct: 157 YFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYSLLIETYI 216
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+ EK LF A ET+PCV KKA WALNWI+ S TF ER+IAFA VEGIFFSGSF AIF
Sbjct: 217 SDPKEKDFLFNAIETLPCVGKKAKWALNWINHESATFPERVIAFAAVEGIFFSGSFAAIF 276
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRG+MPGLTFSNELISRDEGLHCDFACL++ + K S E VK I+ +AVEIE+EF+
Sbjct: 277 WLKKRGVMPGLTFSNELISRDEGLHCDFACLIFKHIIQKPSFEHVKSIIMDAVEIEKEFL 336
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
ALP L+GMN +LM YIEFVADRL ALG KVY NPF +M ISL+GKTNFFEK
Sbjct: 337 TQALPVELIGMNCSLMCNYIEFVADRLFVALGFEKVYNSENPFSFMNFISLEGKTNFFEK 396
Query: 301 RVGEYQKASVM 311
+VGEY+K V+
Sbjct: 397 KVGEYKKFGVV 407
>gi|356927835|gb|AET42625.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 202]
Length = 325
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 248/324 (76%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NPDRF +FPI + +I+E YKKAEAS W E+D+S D W LT +E+HFI +
Sbjct: 3 EPLLNDNPDRFALFPIVHKDIYEEYKKAEASIWGVAEIDISTDKIDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA +DG+VLENLA F EVQ EAR FY FQI IE +H+E Y+++L+T++ + DE
Sbjct: 63 ILAFFATADGVVLENLATNFATEVQYPEARCFYNFQIFIETVHAETYAMMLQTFVDDRDE 122
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
LFRA T+P + +KADWAL WI +FAERLIAFA VEGIFFSG+FCAIFWLKKRG
Sbjct: 123 LRSLFRAIHTIPSIKQKADWALKWISSDRSFAERLIAFAVVEGIFFSGAFCAIFWLKKRG 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFAC+LY + NKL E V IV AVE+ER+F+C+ALP
Sbjct: 183 LMPGLTFSNELISRDEGLHTDFACMLYRDHIINKLPYETVLDIVTSAVELERQFICEALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N MS YI+FVADRL +LG K Y VTNPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINSESMSTYIKFVADRLFISLGYPKHYKVTNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM +LN +G F +DEDF
Sbjct: 303 QKAGVMEALN-DGPKQGFTLDEDF 325
>gi|336171888|ref|YP_004579026.1| ribonucleoside-diphosphate reductase [Lacinutrix sp. 5H-3-7-4]
gi|334726460|gb|AEH00598.1| Ribonucleoside-diphosphate reductase [Lacinutrix sp. 5H-3-7-4]
Length = 327
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/308 (67%), Positives = 250/308 (81%), Gaps = 3/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPIQ+ ++WE YKK+EAS WTAEE+DL QD+ W S LT DE++FI
Sbjct: 6 EPILQENKDRFVIFPIQHHDLWEWYKKSEASMWTAEEIDLHQDLTDWSSKLTDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 66 HVLAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF A ET P + KKA+WAL WI+ S +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKAMLFNAIETFPAIKKKAEWALKWIE-SPSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ L NK+ +ER++ I+ +A+ IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDFAVHLHEHHLINKVPKERIREILVDALNIEREFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LMSQY+EFV D LL LGC K YG NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PVSLIGMNSKLMSQYLEFVTDGLLQDLGCEKEYGTANPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMS 312
YQKA V++
Sbjct: 305 YQKAGVLN 312
>gi|410955834|ref|XP_003984555.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Felis
catus]
Length = 297
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/301 (70%), Positives = 247/301 (82%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEEVDLS+DI+ WESL A+E++FI+HVLAFFAASDGIV ENL RF +E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWESLKAEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV KKADWAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPREREFLFNAIETMPCVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKESTYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L +K SE+RVK I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+
Sbjct: 181 ACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
LG GKV+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D D
Sbjct: 241 LELGFGKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|401886060|gb|EJT50123.1| ribonucleoside-diphosphate reductase [Trichosporon asahii var.
asahii CBS 2479]
gi|406697819|gb|EKD01069.1| ribonucleoside-diphosphate reductase [Trichosporon asahii var.
asahii CBS 8904]
Length = 420
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 255/330 (77%), Gaps = 6/330 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + DRF +FPI+Y EIW+MYKKA+ASFWTAEE++L+ D+ W++ L +E++FI
Sbjct: 91 DEPLLKESTDRFVLFPIKYREIWQMYKKAQASFWTAEEINLAPDLHDWDNKLNDNERYFI 150
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ+SEA+ FYGFQI +ENIHSE YSLL++TYI+++
Sbjct: 151 EHVLAFFAASDGIVNENLVERFCGEVQISEAKTFYGFQIMMENIHSETYSLLIDTYIRDN 210
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ LF+A ET+PC+ KKADWAL WI D +F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 211 ARRQYLFQAIETIPCIKKKADWALRWISDQRSSFGERLIAFAAVEGIFFSGSFASIFWLK 270
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + I+KEAV+IE+EF+ +A
Sbjct: 271 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTINKIIKEAVKIEQEFLTEA 330
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KV+ NPFD+ME+ISLQGK NFFE RV
Sbjct: 331 LPVSLIGMNAKLMCQYIEFVADRLLVALGNDKVWNSANPFDFMEMISLQGKANFFESRVS 390
Query: 304 EYQKASVMSSLNGN----GGNHVFKMDEDF 329
Y K+ V S+ F +DEDF
Sbjct: 391 AYSKSGVNQSVGKTAEEAASGRAFSLDEDF 420
>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 422
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N R+ MFPI+Y EIW+MYKKAEASFWTAEE+DL +D+ W++ L +E+ FI
Sbjct: 98 DEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDMHDWKNKLNENERFFI 157
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ +LAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 158 SRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIDTYIKDP 217
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A + +P + KKADWA+ WI D + FAERL+AFA VEG+FFSGSF +IFWLK
Sbjct: 218 KEADFLFNAIDNIPQIKKKADWAIRWINDDNALFAERLVAFAAVEGVFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L N+ + V+ I+ EAVEIE+EF DA
Sbjct: 278 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLENRPDPKIVEKIISEAVEIEKEFFTDA 337
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG K+Y VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 338 LPVSLLGMNCKLMCQYVEFVADRLLVALGNEKIYKVTNPFDFMENISLAGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 398 DYQKAGVMAKSEDKNANE-FTFDEDF 422
>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
Length = 322
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/327 (63%), Positives = 255/327 (77%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EP+L + DR+ +FPIQY +IW+MYKKA ASFWT EEVD+S+D++ W LT+DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWKMYKKAVASFWTPEEVDISKDLKDWHILTSDEKYF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENLA RF EVQ++EAR FYGFQIAIENIHSEMYSLL++TYI +
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAIENIHSEMYSLLIDTYIID 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF+A ET+ C+ +KA+W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 IQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L + SE R I+KEAV IE++F+
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLNHTPSETRATDIIKEAVVIEQQFLTK 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+G+N LM QYIEFVADRL+ LG K++ TNPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGINCDLMCQYIEFVADRLVTELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ V S ++ F +D DF
Sbjct: 301 SDYQRMGVASK-----QDNTFSLDVDF 322
>gi|1710399|sp|P50649.1|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 322
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 251/323 (77%), Gaps = 6/323 (1%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
+L DRF ++PI YP+++ YKKAEA FWTAEE+D S D++ +E L +EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFAASDGIVLENLA F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEA--VEIEREFVCDALPC 246
GLTFSNELISRDEGLH DF CL+YSLL NKL E+ V+ IVKEA VE+E+ F+C++LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 303
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ +HVF ++ +F
Sbjct: 304 KSGVMAQ----RKDHVFCLNTEF 322
>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
Length = 325
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 253/328 (77%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
+ P EP+L P +++ +FPI Y +IW+MYKKA ASFWT EEVDLS+D W L+ +EK+
Sbjct: 2 NTPCEPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKN 61
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI H+LAFFAASDGIV ENLA RF EVQ+SEAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 62 FIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYIL 121
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFW 181
+S EK+ LF A E + CV +KA+WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW
Sbjct: 122 DSKEKNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFW 181
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
+KKRGLMPGLTFSNELISRDEGLHCDFAC+++ L N V+ I+ EAV IE+ F+
Sbjct: 182 IKKRGLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLT 241
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+A+P L+GMN LM QYIEFVADRLL LGC K Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 242 EAIPVKLIGMNCDLMKQYIEFVADRLLLELGCNKYYCSKNPFDFMENISLEGKTNFFEKR 301
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V EYQK SVMS N ++VF +D DF
Sbjct: 302 VSEYQKMSVMS----NKKDNVFSLDIDF 325
>gi|341889599|gb|EGT45534.1| hypothetical protein CAEBREN_21681 [Caenorhabditis brenneri]
Length = 375
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/308 (67%), Positives = 246/308 (79%), Gaps = 1/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL +RF +FP++Y EIW+ YKKA ASFWT EEVDL +D+ WE + DE++FI+
Sbjct: 56 EPLLQDLDNRFVIFPLRYHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISR 115
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EV+VSEAR FYGFQIAIENIHSEMYS L+ETYI++ E
Sbjct: 116 VLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEQE 175
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ +LF A + KKADWAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKKR
Sbjct: 176 RHKLFNAIFEFEFIKKKADWALKWISDQKASFAERLIAFAAVEGIFFSGSFASIFWLKKR 235
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLYS+L+NKL++ER+ I+ +AV+IE+EF+ +ALP
Sbjct: 236 GLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIYEIISDAVKIEQEFLTEALP 295
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LMSQYIEFVAD LL LGC K++ V NPFD+ME IS+ GKTNFFEKRV EY
Sbjct: 296 VDMIGMNCRLMSQYIEFVADHLLAELGCDKLFKVKNPFDFMENISIDGKTNFFEKRVSEY 355
Query: 306 QKASVMSS 313
Q+ VMS+
Sbjct: 356 QRPGVMST 363
>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
saltator]
Length = 344
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/308 (69%), Positives = 248/308 (80%), Gaps = 3/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQ-DIRQWE-SLTADEKHFI 64
EPLL P+RF +FPI+YP+IW+MYKKA ASFWT EEV L + D + WE L +DE++FI
Sbjct: 18 EPLLQEEPNRFVIFPIRYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEKLNSDERYFI 77
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF +EV++SEAR FYGFQIAIENIHSEMYSLL+ETYI +
Sbjct: 78 SHVLAFFAASDGIVNENLIERFCQEVKISEARCFYGFQIAIENIHSEMYSLLIETYISDL 137
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK LF A ET+PCV KKA+WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWLK
Sbjct: 138 KEKDFLFNAIETLPCVTKKANWALNWINHESATFPERIVAFAAVEGIFFSGSFAAIFWLK 197
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELISRDEGLHCDFACL++ + K S ERVK I+ +AVEIE+EF+ A
Sbjct: 198 KRGVMPGLTFSNELISRDEGLHCDFACLMFKHVIQKPSFERVKTIIMDAVEIEKEFLTQA 257
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM YIEFVADRL ALG KVY NPF +M+ ISL+GKTNFFEK+VG
Sbjct: 258 LPVKLIGMNCTLMCTYIEFVADRLFVALGFDKVYNSENPFSFMDFISLEGKTNFFEKKVG 317
Query: 304 EYQKASVM 311
EY+K VM
Sbjct: 318 EYKKFGVM 325
>gi|409124160|ref|ZP_11223555.1| ribonucleoside-diphosphate reductase small chain [Gillisia sp.
CBA3202]
Length = 325
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IW+ YKK EASFWTAEE+DL QD+ W + L ADE++FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNADERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+A E P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKNQLFQAIEHFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ + + NK+ +ER+ I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHQNHIINKVPKERIHQILTDALTIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM++Y+EFV DRLL GC K YG NPFD+M++I+LQGKTNFFEKRVGE
Sbjct: 244 PASLIGMNAKLMTEYLEFVTDRLLVEFGCEKEYGSANPFDFMDMINLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N + D DF
Sbjct: 304 YQKAGVM---NKDKDTDKISFDADF 325
>gi|372209392|ref|ZP_09497194.1| ribonucleoside-diphosphate reductase small chain [Flavobacteriaceae
bacterium S85]
Length = 323
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 257/325 (79%), Gaps = 8/325 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L +P+RF +FPI++ +IWE YKK EAS WTAEE+DL QDI WE+ L DE++FI
Sbjct: 5 EPILQEDPNRFVIFPIKHQDIWEWYKKQEASIWTAEEIDLHQDISDWENKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE+YSLL++TY+KN +
Sbjct: 65 HILAFFAASDGIVNENLAENFVTEVQYAEAKFFYGFQIMMENIHSEVYSLLIDTYVKNEE 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+A E P + KADWAL WI+ SE+FAERLIAFA VEGIFFSGSFCAIFW+KKR
Sbjct: 125 EKNKLFKAIEHFPAIKLKADWALKWIE-SESFAERLIAFAAVEGIFFSGSFCAIFWMKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GL+PGLTFSNELISRDEGLHCDFA L+ + + NK+ +ER+ I+ A++IE+ F+ ++L
Sbjct: 184 GLLPGLTFSNELISRDEGLHCDFAVHLHNNHIINKVPKERITEIITNALDIEKVFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL GC KVY TNPFD+M++ISL+GKTNFFEKRV +
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVEFGCDKVYNSTNPFDFMDMISLEGKTNFFEKRVSD 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V S GG D DF
Sbjct: 304 YQKAGVKS-----GGTGEISFDADF 323
>gi|375013326|ref|YP_004990314.1| ribonucleotide reductase subunit beta [Owenweeksia hongkongensis
DSM 17368]
gi|359349250|gb|AEV33669.1| ribonucleotide reductase, beta subunit [Owenweeksia hongkongensis
DSM 17368]
Length = 324
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/309 (65%), Positives = 254/309 (82%), Gaps = 3/309 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EP+L N +R+ +FPI++ +IWE YKK EASFWTAEE+DL QD+ WE+ L DE++FI
Sbjct: 4 QEPILQENKNRYVLFPIEHHDIWEWYKKQEASFWTAEEIDLHQDLTDWENKLNDDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 64 KHVLAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMMENIHSETYSLLIDTYIKDK 123
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++++RLF A E P + KKADWA+ WI+ S++FAERLIAFA VEGIFFSGSFC+IFWLKK
Sbjct: 124 EDRNRLFTALENFPAIKKKADWAIKWIE-SDSFAERLIAFAAVEGIFFSGSFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEGLHCDFA L++ L NK+ +ER++ I+ EA++IEREF+ ++
Sbjct: 183 RGLMPGLTFSNELISRDEGLHCDFAVHLHNKHLINKVPKERIRQILMEALDIEREFITES 242
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM++Y+EFV DRLL L C K Y V+NPFD+M++ISLQGKTNFFEKRV
Sbjct: 243 LPVNLIGMNSKLMTEYLEFVTDRLLVELECEKEYNVSNPFDFMDMISLQGKTNFFEKRVA 302
Query: 304 EYQKASVMS 312
EYQK+ V+
Sbjct: 303 EYQKSGVVQ 311
>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
Length = 320
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 252/323 (78%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + RF +FPI+Y +IW+MYK++ ASFWT EEVDLS+D+ W+ LT DEK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA+SDGIV ENLA RF +VQ SEAR FYGFQIA+ENIHSEMYSLL++TY++++ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A ET+ CV KKADWA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + S+E + I+ +AV IE+EF+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC KV+ V NPF +ME ISL+GKTNFFE+RV EYQ
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEKVFNVYNPFSFMEYISLEGKTNFFERRVSEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K V + N ++F D DF
Sbjct: 302 KMGVFT----NKEENIFSTDIDF 320
>gi|426223128|ref|XP_004005729.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Ovis
aries]
Length = 297
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/301 (70%), Positives = 246/301 (81%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEEVDLS+DI+ WE+L +E++FI+HVLAFFAASDGIV ENL RF +E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWEALKPEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+S E+ LF A ET+PCV KKADWAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L +K SE+RVK I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+
Sbjct: 181 ACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
LG KV+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D D
Sbjct: 241 LELGFSKVFKVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 361
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/305 (68%), Positives = 239/305 (78%), Gaps = 1/305 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPI Y +IW MYKK EASFW EEV+L D+ W LT DE+HFI+H
Sbjct: 39 EPLLKDNPRRFVIFPIIYDDIWAMYKKQEASFWNVEEVNLKSDLEDWMKLTDDERHFISH 98
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQI +ENIHSEMYSLL++TYI++ E
Sbjct: 99 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIMMENIHSEMYSLLIDTYIQDPKE 158
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+PCV KKADWAL WI D TF ERL+AFA VEGIFFSGSF A+FWLKKR
Sbjct: 159 KDFLFNAIETMPCVKKKADWALKWISDSKATFGERLVAFAAVEGIFFSGSFAALFWLKKR 218
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACLL+ L K + + I+ EAV IE++F+ +ALP
Sbjct: 219 GLMPGLTFSNELISRDEGLHTDFACLLFKHLEQKPPQAVITHIICEAVTIEQDFLTNALP 278
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+VGM+ M+ YIEFVADRLL LGC VY +NPF +M+LIS QGKTNFFEKRVG+Y
Sbjct: 279 VRMVGMSCEKMAVYIEFVADRLLNELGCPTVYRSSNPFPFMDLISQQGKTNFFEKRVGDY 338
Query: 306 QKASV 310
QKASV
Sbjct: 339 QKASV 343
>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase subunit beta [Flavobacterium
psychrophilum JIP02/86]
gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 325
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/309 (64%), Positives = 252/309 (81%), Gaps = 3/309 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPI++ +IWE YK EASFWTAEE+DLSQD+ W + L+ DE++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNKLSNDERYFVK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF A E P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDELFNALEVFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER++ I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIRSIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LGC + Y NPFD+M++ISLQGKTNFFEK+V E
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLVELGCDREYNTANPFDFMDMISLQGKTNFFEKKVAE 303
Query: 305 YQKASVMSS 313
YQKA VM++
Sbjct: 304 YQKAGVMNT 312
>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
WM276]
Length = 401
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/329 (62%), Positives = 254/329 (77%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL RF +FPI+Y EIW+MYKKA+ASFWTAEE++L+ D+ WE+ L +E++FI
Sbjct: 73 DEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFI 132
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ +EA++FYGFQI +ENIH+E YSLL++TYIK++
Sbjct: 133 EHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDT 192
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A +T+PC+ KKADWAL WI D F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 193 ARRNFLFDAMDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + I+KEAV IE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIARIIKEAVSIEQEFLTDA 312
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K++ TNPFD+ME+ISLQGK NFFE RV
Sbjct: 313 LPVSLIGMNAKLMCQYIEFVADRLLVALGNEKIWNSTNPFDFMEMISLQGKANFFESRVS 372
Query: 304 EYQKASVMSSLNGNGGNHV---FKMDEDF 329
Y K+ V ++ N + F +DEDF
Sbjct: 373 AYSKSGVNQAVGAADHNAIKKGFSLDEDF 401
>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
Length = 319
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/323 (65%), Positives = 249/323 (77%), Gaps = 6/323 (1%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
+L N RF +FPI++ +IW+MYK+AEASFWTAEEVDL D++ W++ L E+HFI HV
Sbjct: 1 MLAVNSLRFVLFPIEHDDIWQMYKQAEASFWTAEEVDLCHDVQHWDTKLNDKERHFIKHV 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIV ENLA F EVQ EAR FYGFQIAIENIHSE+YSLL++TYI+++ +K
Sbjct: 61 LAFFAASDGIVNENLAQNFATEVQWPEARCFYGFQIAIENIHSEVYSLLIDTYIRDAQKK 120
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
A +T+PCVA+KA WAL W D +F ERL+AFA VEGIFFSGSFCA+FWLKKRG
Sbjct: 121 HECLTAIDTMPCVAEKAQWALRWCDPDHASFTERLLAFAAVEGIFFSGSFCAVFWLKKRG 180
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGL+FSNELI+RDEGLHCDFACLLYS LR KLS+ +V IV AV+IE+ FV ALP
Sbjct: 181 LMPGLSFSNELIARDEGLHCDFACLLYSKLRKKLSDVQVASIVGAAVDIEKSFVVSALPV 240
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN M +YIEF ADRLL LG +YG TNPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 241 ELIGMNSKSMCKYIEFCADRLLLELGYSTLYGATNPFDWMELISLQGKTNFFEKRVGEYA 300
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
KA V + F++D+DF
Sbjct: 301 KARV----DVRAQRLEFRLDDDF 319
>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
gi|56404692|sp|Q9DHU2.1|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
Length = 325
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P +++ +FPI Y +IW+MYKKA ASFWT EEVDLS+D W L+ +EK+FI H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ+SEAR FYGFQIA+ENIHSEMYSLL++TYI +S E
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A E + CV +KA+WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC+++ L N V+ I+ EAV IE+ F+ +A+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC K Y NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSEY 305
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK SVMS N ++VF +D DF
Sbjct: 306 QKMSVMS----NKKDNVFSLDIDF 325
>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
Length = 365
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/309 (67%), Positives = 246/309 (79%), Gaps = 1/309 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL +RF +FP+++ EIW+ YKKA ASFWT EEVDL +D+ WE + DE++FI+
Sbjct: 45 DEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 104
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL RF EV+VSEAR FYGFQIAIENIHSEMYS L+ETYI++
Sbjct: 105 RVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEK 164
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ +LF A + KKADWAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 165 ERMKLFNAIFEFEFIKKKADWALRWISDTKASFAERLIAFAAVEGIFFSGSFASIFWLKK 224
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS+L+NKLS+ER+ I+++AV IE+EF+ +AL
Sbjct: 225 RGLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLSQERIFEIIRDAVAIEQEFLTEAL 284
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD LL LGC K+Y V NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 285 PVDMIGMNCRLMSQYIEFVADHLLQELGCDKLYNVKNPFDFMENISIDGKTNFFEKRVSE 344
Query: 305 YQKASVMSS 313
YQ+ VM S
Sbjct: 345 YQRPGVMVS 353
>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
salmonis]
Length = 335
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +LTPN ++ MFPI Y +IW MYKKA A+FWT EEVDLS+D+ W L DEKHFI++
Sbjct: 16 EIILTPNNSKYVMFPIVYKDIWFMYKKALATFWTVEEVDLSKDLMDWAKLNKDEKHFISN 75
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ++EAR+FYGFQI IENIHSEMYSLL++TYI++ E
Sbjct: 76 VLAFFAASDGIVNENLLERFASEVQIAEARSFYGFQIMIENIHSEMYSLLIDTYIEDDKE 135
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF + T+ CV KKA+WAL WI G + FA RL+AFA VEGIFFSGSF ++FWLKKRG
Sbjct: 136 KDKLFNSILTIECVKKKAEWALRWITGDKPFATRLVAFAAVEGIFFSGSFASLFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEG H DFACLLYS L NKL + V I+KE VEIE+EFV D+LP
Sbjct: 196 LMPGLTFSNELISRDEGSHTDFACLLYSHLENKLDPKYVLQIIKEGVEIEKEFVADSLPV 255
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVAD LL L K Y NPF++M+ IS+ GKTNFF+KRV EYQ
Sbjct: 256 GLIGMNAKMMKNYIEFVADNLLENLNIEKYYHTKNPFNFMDNISMTGKTNFFDKRVSEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
+ V S + FK+++DF
Sbjct: 316 RPFVASE---KENDSTFKLEDDF 335
>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 401
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 254/329 (77%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL RF +FPI+Y EIW+MYKKA+ASFWTAEE++L+ D+ WE+ L +E++FI
Sbjct: 73 DEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFI 132
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ +EA++FYGFQI +ENIH+E YSLL++TYIK++
Sbjct: 133 EHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDT 192
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A +T+PC+ KKADWAL WI D F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 193 ARRNFLFDAIDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + I+KEAV IE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIARIIKEAVTIEQEFLTDA 312
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL A+G K++ TNPFD+ME+ISLQGK NFFE RV
Sbjct: 313 LPVSLIGMNAKLMCQYIEFVADRLLVAMGNEKIWNSTNPFDFMEMISLQGKANFFESRVS 372
Query: 304 EYQKASVMSSLNGNGGNHV---FKMDEDF 329
Y K+ V ++ N + F +DEDF
Sbjct: 373 AYSKSGVNQAVGAADHNAIKKGFSLDEDF 401
>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
Length = 418
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL N RF +FPIQY +IW MYKKA ASFWT EEVDL +D+ W+ L +E+ FI H
Sbjct: 94 EPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKKLKKEEQFFIKH 153
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RFM E+Q+ EAR+FYGFQI +ENIHSEMY+ L+E + ++ E
Sbjct: 154 VLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKE 213
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A ET+P + KKADWAL WI ++ R+IAFA VEGIFFSGSF AIFWLKKRG
Sbjct: 214 KMGLFNAIETMPAIKKKADWALKWIGADAPYSVRVIAFAAVEGIFFSGSFAAIFWLKKRG 273
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPG+TFSNELISRDEGLH DFACL+Y + K S+E++ I+++AV IE+EF+ DALP
Sbjct: 274 LMPGVTFSNELISRDEGLHTDFACLMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPV 333
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM YIEFVADRLL L C K+Y V NPFD+ME+ISL+GKTNFFEK+V EY
Sbjct: 334 RLIGMNCDLMKTYIEFVADRLLVELDCPKIYKVENPFDFMEMISLEGKTNFFEKKVSEYA 393
Query: 307 KASVMSSLNGNGGN--HVFKMDEDF 329
+A VM+ L+ + + + F +D DF
Sbjct: 394 RAGVMAHLDADPDSVENQFSLDCDF 418
>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
Length = 325
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/327 (65%), Positives = 249/327 (76%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ EP+L R+ +FPI Y +IW MYKKA ASFWT EEVDLS+D W L+ +EK F
Sbjct: 3 VVSEPILRQTTGRYVVFPIVYKDIWMMYKKAVASFWTVEEVDLSKDFPDWLKLSENEKKF 62
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+LAFFAASDGIV ENLA RF EVQVSEAR FYGFQIA+ENIHSEMYSLL++TYI +
Sbjct: 63 IKHILAFFAASDGIVNENLAERFYSEVQVSEARCFYGFQIAMENIHSEMYSLLIDTYILD 122
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
S EK+ LF A E + CV +KA+WA WI+ + T+ ERLIAFA VEGIFFSGSF AIFW+
Sbjct: 123 SKEKNYLFNAIENMNCVKQKANWARKWIESKNSTYGERLIAFAAVEGIFFSGSFAAIFWI 182
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFAC+++ L N E ++ IV EAV+IE+ F+ +
Sbjct: 183 KKRGLMPGLTFSNELISRDEGLHCDFACMMFKHLSNPPLENVIRDIVIEAVDIEKNFLTE 242
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
A+P L+GMN LM QYIEFVADRLL LGC K Y NPFD+ME ISL+GKTNFFEKRV
Sbjct: 243 AMPVKLIGMNCDLMKQYIEFVADRLLLELGCKKYYCSKNPFDFMENISLEGKTNFFEKRV 302
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQK SVMS N + VF +D DF
Sbjct: 303 SEYQKMSVMS----NKDDDVFSLDIDF 325
>gi|443242947|ref|YP_007376172.1| ribonucleoside-diphosphate reductase small chain [Nonlabens
dokdonensis DSW-6]
gi|442800346|gb|AGC76151.1| ribonucleoside-diphosphate reductase small chain [Nonlabens
dokdonensis DSW-6]
Length = 330
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 257/327 (78%), Gaps = 4/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFI 64
+EP+L NP+RF +FPIQ+ ++WE YKK +A WTAEE+DL D+ W+ SL +DE++FI
Sbjct: 5 QEPILQENPNRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDLTDWQNSLNSDERYFI 64
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDD 124
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK +LF+A E P + KADWA+ WI+ S +FAERLIAFA VEGIFFSG+FC+I+WLKK
Sbjct: 125 KEKDQLFKAIENFPAIKLKADWAMKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKK 183
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L NK+ +ER+ I+ +A+ IEREF+ ++
Sbjct: 184 RGLMPGLTFSNELISRDEGMHCDFAVHLHNHHLVNKVPKERITEIIVDALNIEREFITES 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLL L C VY VTNPFD+M+LI ++GKTNFFEKRVG
Sbjct: 244 LPASLIGMNAKLMTQYLEFVTDRLLVELECDPVYNVTNPFDFMDLIGMEGKTNFFEKRVG 303
Query: 304 EYQKASVMSSLNGNGGN-HVFKMDEDF 329
EYQKA VM+S + F +D DF
Sbjct: 304 EYQKAGVMNSTKEDKSTMDSFSLDADF 330
>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 296
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 240/301 (79%), Gaps = 6/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEE+DL+ D++ W+ L+++E+HF++HVLAFFAASDGIV ENLA F E
Sbjct: 1 MYKKAEASFWTAEEIDLAGDLQDWDKLSSNERHFVSHVLAFFAASDGIVNENLAGNFATE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
+Q +EAR FYGFQIA+ENIHSE YSLL++TY++++ EK L A ETVPCV KKA WAL
Sbjct: 61 IQSAEARCFYGFQIAVENIHSETYSLLIDTYVRDAAEKDHLLHAIETVPCVQKKASWALQ 120
Query: 150 WIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W D + +FAER +AFA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDANHASFAERCVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACLLYS L+N+L R+ I+ +AV IE+EFV DALP L+GMN LM +YIEF ADRLL
Sbjct: 181 ACLLYSKLQNQLPVARIVEIITDAVTIEQEFVQDALPVELIGMNSTLMCRYIEFCADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
ALGC K Y NPFDWME+ISLQGKTNFFEKRVGEY K+ V G NH F ++ D
Sbjct: 241 VALGCPKHYKAVNPFDWMEMISLQGKTNFFEKRVGEYAKSGV-----GEKDNHCFDLEAD 295
Query: 329 F 329
F
Sbjct: 296 F 296
>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/301 (70%), Positives = 245/301 (81%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWTAEEVDLS+DI+ WESL +E++FI+HVLAFFAASDGIV ENL RF +E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV KKADWAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L +K SEERV+ I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+
Sbjct: 181 ACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
LG KV+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D D
Sbjct: 241 LELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/316 (63%), Positives = 247/316 (78%), Gaps = 3/316 (0%)
Query: 7 EPLLTPNPD--RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
EP+ + + RF +FPI YP++W MYK+ ASFWTA+E+DLS D+ W + L DE+HF
Sbjct: 1 EPICRTDEEGSRFSLFPIAYPDLWSMYKQHVASFWTADEIDLSADLSDWHKKLNPDERHF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+ VLAFFA +DGIV+ENLA RF +EV V EAR FYGFQ+A+E+IH E Y LL++TYI +
Sbjct: 61 ISMVLAFFAGADGIVVENLAERFCREVTVPEARCFYGFQMAMESIHQETYCLLIDTYITD 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ RLF A TVP V +KA WA +I +FAERL+AFA VEGIFFSGSFCAIFWLK
Sbjct: 121 PKVRERLFSAHATVPSVERKASWAQRYIGSKASFAERLVAFAAVEGIFFSGSFCAIFWLK 180
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLHC FAC LYS L+ KLS+E ++ I+ EAV++E+ F+CDA
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCSFACQLYSKLKLKLSQEEIQTIINEAVDVEKSFICDA 240
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QYIEFVADR+L LG +YG NPFDWM++ISL+GKTNFFEKRVG
Sbjct: 241 LPVSLIGMNSRLMAQYIEFVADRMLTDLGYQAMYGSKNPFDWMDMISLEGKTNFFEKRVG 300
Query: 304 EYQKASVMSSLNGNGG 319
EYQK+ VM+SL G
Sbjct: 301 EYQKSGVMASLEGKSA 316
>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
Length = 328
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 253/329 (76%), Gaps = 4/329 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEK 61
S EP+L N DRF +FPIQ+ ++WE YKK EA WTAEE+DL QD+ W + L DEK
Sbjct: 2 STAVEPILQENKDRFVIFPIQHHDLWEWYKKQEACIWTAEEIDLHQDLTDWNTKLNDDEK 61
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYV 121
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
K+ EK LF+A E P + KKADWAL WI+ S +FAERLIAFA VEGIFFSGSFC+IFW
Sbjct: 122 KDDKEKDILFKAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGSFCSIFW 180
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFV 240
LKKRGLMPGLTFSNELISRDEG+HCD+A L+ + + NK+++ER+ I+ +A+ IEREF+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHCDYAVHLHKNHIVNKVTKERITDIIVDALNIEREFI 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
++LP +L+GMN LM+QY+EFV DRLL L C KVY +NPFD+M++ISLQGKTNFFEK
Sbjct: 241 TESLPVSLIGMNSKLMTQYLEFVTDRLLVELECDKVYNSSNPFDFMDMISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RV EYQKA V++ + D DF
Sbjct: 301 RVSEYQKAGVLNKDKDEDAQKI-SFDADF 328
>gi|409080029|gb|EKM80390.1| hypothetical protein AGABI1DRAFT_39266 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 396
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/322 (63%), Positives = 243/322 (75%), Gaps = 2/322 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFI 64
+EPLL + RF +FP+QYPEIW YKKA+ASFWT EE+DLS DI W L DE+ FI
Sbjct: 37 QEPLLKESQRRFVLFPVQYPEIWRYYKKAQASFWTVEEIDLSHDITDWAYRLNKDERRFI 96
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFAASDGIV ENL RF EVQV+EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 97 SHILAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 156
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
DE+ LF A ET+P + +KA WAL WI +FAERL+AFA VEG+FFSGSF AIFW+K
Sbjct: 157 DERKHLFDAVETIPTIKRKAVWALRWISSRGLSFAERLVAFAAVEGVFFSGSFAAIFWIK 216
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI+RDEG+H DFACLL++ LR + RV I+ EAV IE++F DA
Sbjct: 217 KRGLMPGLTFSNELITRDEGMHTDFACLLFTHLRRRPHPNRVLEIITEAVAIEKDFFGDA 276
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM QYIEFVADRLL +LG K Y TNPFD+ME+ISLQGK NFFEKRV
Sbjct: 277 LPVALIGMNSKLMCQYIEFVADRLLVSLGNAKYYHATNPFDFMEMISLQGKANFFEKRVS 336
Query: 304 EYQKASVMSSLNGNGGNHVFKM 325
EY +A + S H ++
Sbjct: 337 EYARAHINHSSPELSSKHTHRI 358
>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL N RF +FPIQY +IW MYKKA ASFWT EEVDL +D+ W+ L +E+ FI H
Sbjct: 58 EPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKKLKKEEQFFIKH 117
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RFM E+Q+ EAR+FYGFQI +ENIHSEMY+ L+E + ++ E
Sbjct: 118 VLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKE 177
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A ET+P + KKADWAL WI ++ R+IAFA VEGIFFSGSF AIFWLKKRG
Sbjct: 178 KMGLFNAIETMPAIKKKADWALKWIGADAPYSVRVIAFAAVEGIFFSGSFAAIFWLKKRG 237
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPG+TFSNELISRDEGLH DFACL+Y + K S+E++ I+++AV IE+EF+ DALP
Sbjct: 238 LMPGVTFSNELISRDEGLHTDFACLMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPV 297
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM YIEFVADRLL L C K+Y V NPFD+ME+ISL+GKTNFFEK+V EY
Sbjct: 298 RLIGMNCDLMKTYIEFVADRLLVELDCPKIYKVENPFDFMEMISLEGKTNFFEKKVSEYA 357
Query: 307 KASVMSSLNGNGGN--HVFKMDEDF 329
+A VM+ L+ + + + F +D DF
Sbjct: 358 RAGVMAHLDADPDSVENQFSLDCDF 382
>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
[Cryptosporidium muris RN66]
gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Cryptosporidium muris RN66]
Length = 346
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEP+L+ + + + +W MYKK EASFWTAEE+DL QD+R WESL EKHFI
Sbjct: 27 EEPVLSSDTRLHQIIKSEIEVMWSMYKKEEASFWTAEEIDLGQDMRDWESLKEPEKHFIK 86
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIV+ENLA F+KE+Q+ EAR +YGFQIA+E IHSE YSLL++ YI +
Sbjct: 87 YVLAFFAASDGIVMENLAVNFLKEIQIEEARMYYGFQIAMEQIHSETYSLLIDQYISDVK 146
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF A +P V KA WA W++ + +FAER+I F VEGI FSGSFCAIFWLKKR
Sbjct: 147 DRQMLFEAISHLPAVKTKAKWATKWMNNNRSFAERIIGFCAVEGILFSGSFCAIFWLKKR 206
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG+H DF CLLY L N+L RV+ I+ EAVE+ER F+CD+LP
Sbjct: 207 GLMPGLTFSNELISRDEGIHADFGCLLYKTLNNRLPYGRVQEIIAEAVEVERAFLCDSLP 266
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM+QYIEFVADRLL AL K+Y VTNPFDWM+LISLQGKTNFFEKRV EY
Sbjct: 267 VDLIGMNSRLMAQYIEFVADRLLFALDVPKIYNVTNPFDWMDLISLQGKTNFFEKRVAEY 326
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q A VM+ + + +F +D +F
Sbjct: 327 QMAGVMA----HQKDQIFNLDAEF 346
>gi|340617898|ref|YP_004736351.1| ribonucleoside-diphosphate reductase, small subunit [Zobellia
galactanivorans]
gi|339732695|emb|CAZ95963.1| Ribonucleoside-diphosphate reductase, small subunit [Zobellia
galactanivorans]
Length = 328
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 257/325 (79%), Gaps = 4/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ ++WE YKK EA FWTAEE+DL +D W++ L+ DE++FI
Sbjct: 6 EPILEENNDRFVIFPIKHHDLWEWYKKCEACFWTAEEIDLHEDQNDWDNKLSEDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LFRA E P + KKADWALNWI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKALLFRAIENFPAIKKKADWALNWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCD+A L++ L NK+ +ER+ I+ +A++IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNKHLVNKVPKERITQILTDALDIEREFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L C KVY TNPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PASLIGMNSKLMTQYLEFVTDRLLVELECDKVYNATNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V++ + + D DF
Sbjct: 305 YQKAGVLNKEKDDDAQKI-SFDADF 328
>gi|397643211|gb|EJK75718.1| hypothetical protein THAOC_02551 [Thalassiosira oceanica]
Length = 466
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/325 (61%), Positives = 252/325 (77%), Gaps = 2/325 (0%)
Query: 7 EPL-LTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EP+ + + RF +FPI+YP++W +YK+ ASFWTA+E+DLS D+ W + L +DE+HFI
Sbjct: 136 EPICVDDDGRRFSLFPIEYPDLWSLYKQHVASFWTADEIDLSADLTHWNNKLNSDERHFI 195
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFA +DGIV+ENL RF +EV V EAR FYGFQ+A+E+IH E YSLL+++YI +
Sbjct: 196 SMVLAFFAGADGIVMENLVERFCREVTVPEARCFYGFQMAMESIHQETYSLLIDSYIDDP 255
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A TVP V +KA WA +I + TFAERLIAFA VEGIFFSGSFCAIFWLKK
Sbjct: 256 KEREVLFSAHSTVPSVERKAIWAQKYIGSNATFAERLIAFATVEGIFFSGSFCAIFWLKK 315
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHC FAC LYS L+NKL++E + I++EAV++E+ F+CDAL
Sbjct: 316 RGLMPGLTFSNELISRDEGLHCSFACQLYSKLKNKLTQEHINRIIREAVDVEKSFICDAL 375
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QYIEFVADR+L LG +Y NPFDWM++ISL+GKTNFFEKRVGE
Sbjct: 376 PVSLIGMNSGLMGQYIEFVADRMLTDLGYEPLYRSKNPFDWMDMISLEGKTNFFEKRVGE 435
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ VM++ G +++ F
Sbjct: 436 YQKSGVMANFGGEAAGAGMSVNDSF 460
>gi|405123346|gb|AFR98111.1| ribonucleotide reductase subunit [Cryptococcus neoformans var.
grubii H99]
Length = 389
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 254/329 (77%), Gaps = 5/329 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL RF +FPI+Y EIW+MYKKA+ASFWTAEE++L+ D+ WE+ L +E++FI
Sbjct: 61 DEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFI 120
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVLAFFAASDGIV ENL RF EVQ++EA++FYGFQI +ENIH+E YSLL++TYIK++
Sbjct: 121 EHVLAFFAASDGIVNENLVERFSGEVQIAEAKSFYGFQIMMENIHAETYSLLIDTYIKDT 180
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A +T+PC+ KKADWAL WI D F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 181 ARRNFLFDAMDTIPCIRKKADWALRWISDQKSCFGERLIAFAAVEGIFFSGSFASIFWLK 240
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + I+KEAV IE+EF+ DA
Sbjct: 241 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIAKIIKEAVIIEQEFLTDA 300
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K++ NPFD+ME+ISLQGK NFFE RV
Sbjct: 301 LPVSLIGMNAKLMCQYIEFVADRLLVALGNEKIWNSANPFDFMEMISLQGKANFFESRVS 360
Query: 304 EYQKASVMSSLNGNGGNHV---FKMDEDF 329
Y K+ V ++ N + F +DEDF
Sbjct: 361 AYSKSGVNQAVGAADHNAIKKGFSLDEDF 389
>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
Length = 325
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 258/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IW+ YKK EA FWTAEE+DL +D+ W + L+ADE++F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEACFWTAEEIDLHEDLSDWNNKLSADERYFLK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+KN
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKNEK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF+A E P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFKAIEVFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L N++ +E+++ I+ +A+ IEREFV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNQHLVNQVPKEKIREILIDALNIEREFVTESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L C K Y V+NPFD+M++I+LQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVELDCEKEYNVSNPFDFMDMINLQGKTNFFEKRVSE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N + + D DF
Sbjct: 304 YQKAGVM---NKDKESDEISFDADF 325
>gi|422294918|gb|EKU22218.1| ribonucleoside-diphosphate reductase subunit M2 [Nannochloropsis
gaditana CCMP526]
Length = 297
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/301 (69%), Positives = 240/301 (79%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYK+AEASFWTAEE+DL+ D WE LT +E+HF++HVLAFFAASDGIV ENLA F E
Sbjct: 1 MYKQAEASFWTAEELDLAHDKTDWEKLTDNERHFVSHVLAFFAASDGIVNENLALNFSNE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
+Q+ EAR FYGFQIAIENIHSE+YSLL++TYIKN EK +L A ETVPCV +KA WAL
Sbjct: 61 IQLPEARCFYGFQIAIENIHSEVYSLLIDTYIKNPSEKHKLLNAIETVPCVRRKARWALR 120
Query: 150 WIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W D +FAERLIAFA VEGIFFSGSFC+IFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDRKYASFAERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLAFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACLLY+ + K EERVK I+++AV IE++F+ DALP L+GMN LM +YIEF ADRLL
Sbjct: 181 ACLLYTKCKIKCPEERVKAIIQDAVAIEKQFITDALPVELIGMNSRLMCEYIEFCADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
ALGC K Y NPFDWM+LISLQGKTNFFEKRVGEY K+ V GN + VF ++ D
Sbjct: 241 LALGCEKAYHSRNPFDWMDLISLQGKTNFFEKRVGEYAKSGV----GGNIEDQVFSLEVD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|366992756|ref|XP_003676143.1| hypothetical protein NCAS_0D02000 [Naumovozyma castellii CBS 4309]
gi|342302009|emb|CCC69781.1| hypothetical protein NCAS_0D02000 [Naumovozyma castellii CBS 4309]
Length = 399
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/326 (63%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + DR +FPI+Y EIW+ YK+AEASFWTAEE+DLS+D+ W + + +E+ FI
Sbjct: 75 QEPLLNADEDRHTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNPNERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQV EARAFYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSAEVQVPEARAFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WAL WI+ +E FAERL+AFA +EGIFFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIETIPQIKEKAEWALRWINDAEALFAERLVAFAAIEGIFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L++K+ V+ I+ EAVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKVDPSTVERIIVEAVEIEKRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ N F +EDF
Sbjct: 375 DYQKAGVMAKAQDNEAG-AFAFNEDF 399
>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|374105604|gb|AEY94515.1| FAAL136Cp [Ashbya gossypii FDAG1]
Length = 422
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/326 (64%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL N RF +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DI W + +T +E+ FI+
Sbjct: 97 EPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTENERFFIS 156
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 157 RVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPK 216
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A ET+P + +KA+WA+ WI D FAERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 217 EADHLFNAIETIPEIKEKAEWAIRWIQDKDALFAERLVAFAAVEGIFFSGSFAAIFWLKK 276
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+GLMPGLTFSNELI RDEGLH DFACLL++ L NK E V+ I+ EAVEIE+ + DA+
Sbjct: 277 KGLMPGLTFSNELICRDEGLHTDFACLLFAHLNNKPDTEIVEKIITEAVEIEKRYFQDAI 336
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM+QY+EFVADRLL ALG K Y V+NPFD+ME ISL GKTNFFEKRV +
Sbjct: 337 PVALLGMNSSLMNQYVEFVADRLLVALGNKKYYNVSNPFDFMENISLAGKTNFFEKRVSD 396
Query: 305 YQKASVMS-SLNGNGGNHVFKMDEDF 329
YQKA VM+ S + F DEDF
Sbjct: 397 YQKAGVMAKSTKQESESGAFTFDEDF 422
>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
Length = 400
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/327 (63%), Positives = 252/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL +P+R +FPIQYP+I+E YK+AEASFWTAEE+DLS+D+ W + + +E+ FI
Sbjct: 74 EEPLLVADPNRKILFPIQYPDIYEAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFI 133
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F E Q+ EA+ FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 134 SRVLAFFAASDGIVNENLTENFSVEAQILEAKCFYGFQIMIENIHSETYSLLIDTYIKDP 193
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WAL WI+ SE FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 194 KESQYLFNAIETIPQIKEKAEWALRWINDSEALFAERLVAFAAIEGVFFSGSFASIFWLK 253
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S ++NK V+ IV EAVEIE+ + DA
Sbjct: 254 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHIKNKPDPAIVEKIVTEAVEIEKRYFTDA 313
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G KV+ V NPFD+ME ISL GKTNFFEKRV
Sbjct: 314 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKVFKVENPFDFMENISLAGKTNFFEKRVS 373
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKASV++ S N +DEDF
Sbjct: 374 DYQKASVIAKSSNTEVETGALALDEDF 400
>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
Length = 321
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 247/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + +RF +FPI Y +IW MYKKA ASFWT EEVDLS+D+ W+ LT +E++FI +
Sbjct: 2 EPLLVESNNRFVIFPIIYNDIWIMYKKAIASFWTTEEVDLSKDLLDWKKLTDNERYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIAIENIHSEMYSLL++TYI + DE
Sbjct: 62 ILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ L +A +T+ C+ +KA WA WI D T+ ERL+AFA VEGIFFSG+F +IFWLKKR
Sbjct: 122 KNHLLKAIDTIDCIKEKAKWAEKWILDKESTYGERLVAFAAVEGIFFSGAFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L S R+ I+ EAV IE+ F+ ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKQLLYPPSTSRIINIIVEAVSIEKSFLTKALP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC K++ NPFD+ME ISL+GKTNFFEKRV +Y
Sbjct: 242 VKLIGMNCELMCQYIEFVADRLLSELGCNKIFKSENPFDFMESISLEGKTNFFEKRVSDY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK +MS N VF +D DF
Sbjct: 302 QKMGIMSKKEDN----VFSLDADF 321
>gi|422933569|ref|YP_007003693.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 1]
gi|386685975|gb|AFJ20328.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 1]
Length = 340
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 256/332 (77%), Gaps = 11/332 (3%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + EEPLLTP+ +++ + I YP+IW MYKKA ASFWT EEVDL +D++ W +LT +E+
Sbjct: 16 PVVVEEPLLTPSLEKYTLNRIDYPDIWGMYKKALASFWTVEEVDLGKDVQGWNALTHNER 75
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF+ HVLAFFAASDGIV ENL RF EVQV EARAFYGFQIAIEN+HSEMY+ LL TY+
Sbjct: 76 HFLKHVLAFFAASDGIVNENLLERFSTEVQVFEARAFYGFQIAIENVHSEMYAKLLTTYV 135
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
++ E +LFRA ET+PC+ KKADWAL+WI D + +F ERL AFA VEGIFFSGSF AIF
Sbjct: 136 ADAGECKKLFRAIETMPCIKKKADWALSWISDKNASFGERLTAFAAVEGIFFSGSFAAIF 195
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREF 239
WLK+RG+MPGL FSN LISRDEGLH DFAC+LY+ LRNK SE RVK IV EAV+IE+EF
Sbjct: 196 WLKQRGVMPGLCFSNVLISRDEGLHRDFACMLYAKHLRNKPSESRVKQIVGEAVQIEKEF 255
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ ALP +L+GMN LMS+YIE+VAD LL +G +VY NPF +ME ISL+GKTNFFE
Sbjct: 256 LTKALPVSLIGMNITLMSKYIEYVADHLLEQMGLTRVYNTPNPFLFMENISLEGKTNFFE 315
Query: 300 KRVGEYQ--KASVMSSLNGNGGNHVFKMDEDF 329
RVG+YQ A+V+S N F D DF
Sbjct: 316 NRVGDYQVKTAAVVS-------NDTFMADIDF 340
>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 212/223 (95%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
PN500]
Length = 323
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/303 (65%), Positives = 242/303 (79%), Gaps = 1/303 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
+ EEP+L N DRF +FPI++ ++W+ YKKAEASFWTAEE+DL+ D+R W+ L +E++
Sbjct: 2 MQEEPILKENKDRFVLFPIKHQDVWKFYKKAEASFWTAEEIDLAPDLRDWQDKLNDNERY 61
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI++VLAFFAASDGIV ENLA RFM EVQ+ EAR FYGFQIA+ENIHSE YSLL++TYI+
Sbjct: 62 FISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAMENIHSETYSLLIDTYIQ 121
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
N EK++LF A ET+PCV KKA+WAL WI S +FAERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 122 NPAEKTKLFNAIETIPCVQKKANWALKWISNSTSFAERLVAFAAVEGIFFSGSFCSIFWL 181
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKR LM GL SNE ISRDEGLHC FACLLYS L NKL + ++ I+++AV+ E+EF+
Sbjct: 182 KKRNLMSGLCSSNEFISRDEGLHCQFACLLYSKLVNKLDAKTIESIIRDAVDCEKEFITQ 241
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+LP L+GMN LMS+YIEFVAD L+ ALG K+Y NPFDWMELIS+ +TNFFE R
Sbjct: 242 SLPVDLIGMNNRLMSEYIEFVADHLIVALGYKKIYNTANPFDWMELISIDTRTNFFEHRN 301
Query: 303 GEY 305
Y
Sbjct: 302 TSY 304
>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
Length = 377
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/308 (66%), Positives = 245/308 (79%), Gaps = 1/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL +RF +FP+++ EIW+ YKKA ASFWT EEVDL +D+ WE + DE++FI+
Sbjct: 58 EPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISR 117
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EV+VSEAR FYGFQIAIENIHSEMYS L+ETYI++ E
Sbjct: 118 VLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKE 177
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A + KKADWA+ WI D +FAERLIAFA VEGIFFSGSF +IFWLKKR
Sbjct: 178 RLTLFNAIFEFEFIKKKADWAMKWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKR 237
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLYS+L+NKL++ER+ I+++AV IE+EF+ +ALP
Sbjct: 238 GLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIFEIIRDAVCIEQEFLTEALP 297
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LMSQYIEFVAD LL LGC K+Y V NPFD+ME IS+ GKTNFFEKRV EY
Sbjct: 298 VDMIGMNCRLMSQYIEFVADHLLAELGCDKLYNVKNPFDFMENISIDGKTNFFEKRVSEY 357
Query: 306 QKASVMSS 313
Q+ VMS+
Sbjct: 358 QRPGVMST 365
>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 213/223 (95%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEE+VKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
Length = 321
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L RF +FPI Y EIW MYKKA ASFWT +EVDLS+D+ W+ L +E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIAIENIHSEMYSLL++TYI ++ E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAIENIHSEMYSLLIDTYISSTKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+ + KK++WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S + +K I+ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIIKIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LGC KV+ TNPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
Length = 325
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 255/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IWE YKK EA WTAEE+DL D+ W + L DEK+FI
Sbjct: 5 EPILQENKDRFVIFPIKHQDIWEWYKKQEACIWTAEEIDLHTDLNDWNNKLNDDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF A ET P + +KA WAL WI+ S++FAERLIAFA VEGIFFSGSFC+I+WLKKR
Sbjct: 125 EKNKLFHAIETFPAIKEKAQWALKWIE-SDSFAERLIAFAAVEGIFFSGSFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+S + NK+ +ER+ I+ +A+ IER+F+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHSHHIVNKVPKERITEIIVDALNIERQFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LGC +VY +NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNATLMTQYLEFVTDRLLVELGCDRVYNSSNPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM+S + +G D DF
Sbjct: 304 YQKAGVMNSDSESGK---ISFDADF 325
>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Ogataea parapolymorpha DL-1]
Length = 408
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/328 (63%), Positives = 250/328 (76%), Gaps = 4/328 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L +E++F+
Sbjct: 81 DEPLLVENKRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDNERYFV 140
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 141 SRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYVKDP 200
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+PC+ +KA+WA+ WI+ E FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 201 KEAEFLFNAIETIPCIKEKAEWAMRWINDEEALFAERLVAFAAVEGIFFSGSFASIFWLK 260
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L N + + V I+ EAV+IE+ + DA
Sbjct: 261 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNTPNNDIVLKIITEAVDIEKRYFTDA 320
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN +LM QY+EFVADRLL +LGC K Y TNPFD+ME ISL GKTNFFEKRV
Sbjct: 321 LPVNLLGMNCSLMCQYVEFVADRLLLSLGCKKHYNATNPFDFMENISLAGKTNFFEKRVS 380
Query: 304 EYQKASVMSSLNGNGGNHV--FKMDEDF 329
+YQKA VM+ + F DEDF
Sbjct: 381 DYQKAGVMAKNTQEKADTETGFTFDEDF 408
>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
Length = 424
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/322 (63%), Positives = 249/322 (77%), Gaps = 8/322 (2%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
RF +FPI++ EIW+MYKKAEASFWTAEE+DLS+D+ W++ L +E+HFI+HVLAFFAAS
Sbjct: 103 RFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 162
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
DGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYI+ +++ LF A
Sbjct: 163 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREYLFDAV 222
Query: 135 ETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+P V +KADWAL WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTF
Sbjct: 223 ETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 282
Query: 194 SNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
SNELISRDEGLH DFACLL+S LR + + V I+ EAVEIE+ F+C+++P AL+GMN
Sbjct: 283 SNELISRDEGLHTDFACLLFSHLRRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGMNS 342
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSS 313
LM QYIE+VADRLL +LG YG T PFD+M ISL+GKTNFFEK+V EY KA V
Sbjct: 343 KLMCQYIEYVADRLLVSLGNPVHYGSTCPFDFMTNISLEGKTNFFEKKVAEYAKAGVARK 402
Query: 314 LNGNGGN------HVFKMDEDF 329
+ G+ H F ++EDF
Sbjct: 403 DANDSGDGTQKSTHTFSLEEDF 424
>gi|325286576|ref|YP_004262366.1| ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
Length = 328
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ ++W+ YKK EASFWTAEE+DL D+ W++ L DE++FI
Sbjct: 6 EPILEKNEDRFVIFPIKHNDLWDWYKKCEASFWTAEEIDLHADLDDWKNKLNDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF A E P + KKADWAL WI+ S +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKDILFHALENFPAIRKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCD+A L++ L NK+ +ER+ I+ +A++IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNHHLINKVPKERITEILVDALDIEREFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L C KVY TNPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PVSLIGMNSKLMTQYLEFVTDRLLVELNCDKVYNSTNPFDFMDMISLQGKTNFFEKRVAE 304
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK+ V ++ +G+ + D DF
Sbjct: 305 YQKSGVANNNDGDDAQKI-SFDADF 328
>gi|344234526|gb|EGV66394.1| hypothetical protein CANTEDRAFT_112123 [Candida tenuis ATCC 10573]
Length = 423
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/328 (63%), Positives = 250/328 (76%), Gaps = 4/328 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+MYKKAEASFWTAEE+DL +D W + L +E+ F+
Sbjct: 96 DEPLLVENTKRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNNRLNDNERFFV 155
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ +LAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL+++YIK+
Sbjct: 156 SRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDSYIKDP 215
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KADWAL WI+ S+ F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 216 KEADFLFNAIETIPQIKRKADWALRWINDSDALFGERLVAFAAVEGIFFSGSFASIFWLK 275
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L+N+ + E V+ I+ EAV IE+E+ DA
Sbjct: 276 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPNPEIVEQIITEAVAIEKEYFTDA 335
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG KVY TNPFD+ME ISL GKTNFFEKRV
Sbjct: 336 LPISLLGMNCTLMCQYVEFVADRLLVALGNEKVYNTTNPFDFMENISLAGKTNFFEKRVS 395
Query: 304 EYQKASVMSSLNGN--GGNHVFKMDEDF 329
+YQKA VM+S + F D+DF
Sbjct: 396 DYQKAGVMASTSTTEVKTESGFTFDDDF 423
>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 212/223 (95%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAI+NIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIDNIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
Length = 326
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/292 (69%), Positives = 239/292 (81%), Gaps = 1/292 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 35 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 94
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 95 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 154
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 155 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 214
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 215 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 274
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTN 296
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTN
Sbjct: 275 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTN 326
>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
Length = 412
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/326 (63%), Positives = 254/326 (77%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+ YK+AEASFWTAEE+DLS+D+ W + ++ E++FI
Sbjct: 88 DEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLDDWNNKMSEGERYFI 147
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TY +++
Sbjct: 148 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYSRDT 207
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+E LF A E +P + +KA+WA+ WI D + +AERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 208 EESEFLFNAIENIPPIKEKAEWAIRWIQDDTALYAERLVAFAAVEGVFFSGSFAAIFWLK 267
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+N+ S + V+ I+ EAV IE+ + DA
Sbjct: 268 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNRPSPDIVERIITEAVSIEKRYFEDA 327
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN ALM+QY+EFVADRLL ALG K Y VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 328 LPVALLGMNAALMNQYVEFVADRLLVALGNEKYYNVTNPFDFMENISLAGKTNFFEKRVS 387
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VMS G+ FK DEDF
Sbjct: 388 DYQKAGVMSKTTEPQGD-TFKFDEDF 412
>gi|298207002|ref|YP_003715181.1| ribonucleoside-diphosphate reductase small chain [Croceibacter
atlanticus HTCC2559]
gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
[Croceibacter atlanticus HTCC2559]
Length = 325
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 256/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N +RF +FPIQ+ +IWE YKK EA FWTAEE+DL QD+ W S L DE++FI
Sbjct: 5 EPILQKNENRFVIFPIQHNDIWEWYKKMEACFWTAEEIDLHQDLTDWNSKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LFRA E P + KKADWAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFRAIEVFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L NK+S+ER++ I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNKHLVNKVSKERIREIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L C K Y NPFD+M++ISLQGKTNFFEKRVG+
Sbjct: 244 PASLIGMNSNLMTQYLEFVTDRLLLELECEKEYNTANPFDFMDMISLQGKTNFFEKRVGD 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM + + N D DF
Sbjct: 304 YQKAGVM---DQDKDNSKISFDADF 325
>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 2]
Length = 324
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/309 (63%), Positives = 240/309 (77%), Gaps = 1/309 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M EPLLT + +RF MFP+ IW+MYKK FW EE+D S+D+ W L DE
Sbjct: 1 MSKKNTEPLLTEDDNRFVMFPVSDETIWKMYKKQVDCFWRPEEIDTSKDMTHWNKLNTDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
++FI +LAFFA+SDGIVLENL RFM EVQ+SEARAFYGFQIA+ENIHSE YSLL+++Y
Sbjct: 61 QYFIKMILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+SDEK +LF + E PC+ KK DWA+ WI D +FA RL+AFACVEGIFFSG+FC+I
Sbjct: 121 IKDSDEKHKLFHSLEHFPCIKKKGDWAMKWIQDKKSSFATRLVAFACVEGIFFSGAFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
+WLKKRGLMPGLTFSNELISRDE LH +FA LY+ L KL++++V+ I++EAV IE+EF
Sbjct: 181 YWLKKRGLMPGLTFSNELISRDEALHTEFAVYLYNRLEKKLNKKKVREIIEEAVTIEKEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ DALPC ++GMN LM+QYIEFVADRL+ LGC +Y NPFD+MELISL+ KTNFFE
Sbjct: 241 IVDALPCRMIGMNSELMTQYIEFVADRLMMQLGCDVIYATNNPFDFMELISLEQKTNFFE 300
Query: 300 KRVGEYQKA 308
RV EY A
Sbjct: 301 SRVSEYSLA 309
>gi|392568086|gb|EIW61260.1| hypothetical protein TRAVEDRAFT_63110 [Trametes versicolor
FP-101664 SS1]
Length = 428
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/335 (62%), Positives = 251/335 (74%), Gaps = 11/335 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
+EPLLT RF +FPIQY EIW+MYK A+ASFWT EE++LS D+ W + L +E+HFI
Sbjct: 94 QEPLLTETTRRFVLFPIQYDEIWQMYKTAQASFWTVEEINLSYDLMDWSDKLNDNERHFI 153
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
++VLAFFAASDGIV ENL RF EVQ +EAR FYGFQI +EN+HSE YSLL++TYI++
Sbjct: 154 SYVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENVHSETYSLLIDTYIRDP 213
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A +T+PC+ KKADWAL WI D F ERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 214 AARAFLFDAIDTIPCIKKKADWALRWIADERSAFTERLVAFAAVEGIFFSGSFAAIFWLK 273
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+ LR + RV I+ EAV+IE+EF+ +A
Sbjct: 274 KRGLMPGLTFSNELISRDEGMHTDFACLLFHHLRRRAHPNRVLKIIIEAVDIEKEFLTEA 333
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K Y TNPFD+M++ISL GKTNFFEKRV
Sbjct: 334 LPVSLIGMNADLMCQYIEFVADRLLVALGSEKHYRATNPFDFMDMISLTGKTNFFEKRVS 393
Query: 304 EYQKASVM--SSLNGNG-------GNHVFKMDEDF 329
EY A + +G G + +F MDEDF
Sbjct: 394 EYSMAGFQRGGAQDGPGQPPAEGPASRLFTMDEDF 428
>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 212/223 (95%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEE+VKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNAANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 212/223 (95%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEE+VKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNAANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
Length = 321
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/324 (63%), Positives = 248/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + +RF +FPI Y +IW MYKKA ASFWT EEVDLS+D+ W+ LT +E++FI +
Sbjct: 2 EPLLVESNNRFVIFPIVYNDIWIMYKKAVASFWTTEEVDLSKDLLDWKKLTDNERYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIAIENIHSEMYSLL++TYI + DE
Sbjct: 62 ILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ L +A +T+ CV +KA WA WI D ++ ERL+AFA VEGIFFSG+F +IFWLKKR
Sbjct: 122 KNHLLKAIDTIDCVKEKAKWAEKWILDKESSYGERLVAFAAVEGIFFSGAFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L + + R+ I+ EAV IE+ F+ ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKQLLHPPNPSRIINIIVEAVSIEKSFLTTALP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC K++ NPFD+ME ISL+GKTNFFEKRV +Y
Sbjct: 242 VKLIGMNCELMCQYIEFVADRLLSELGCTKIFKSENPFDFMESISLEGKTNFFEKRVSDY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK +MS N VF +D DF
Sbjct: 302 QKMGIMSKKEDN----VFSLDVDF 321
>gi|365984697|ref|XP_003669181.1| hypothetical protein NDAI_0C02780 [Naumovozyma dairenensis CBS 421]
gi|343767949|emb|CCD23938.1| hypothetical protein NDAI_0C02780 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/326 (63%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLLT + DR +FPI+Y EIW+ YK+AEASFWTAEE+DLS+D+ W + + A+E+ FI
Sbjct: 75 EEPLLTYDNDRHTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNANERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EARAFYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSAEVQIPEARAFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WAL WI+ SE+ F ERL+AFA +EGIFFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIETIPQIKEKAEWALRWINDSESPFGERLVAFAAIEGIFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L++K+ V+ I+ +AVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKIEPSTVETIIVQAVEIEKRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA V++ F + EDF
Sbjct: 375 DYQKAGVIAKATETETG-AFVISEDF 399
>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
Length = 326
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 253/325 (77%), Gaps = 5/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPIQ+ ++WE YKK EA WTAEE+DLS+D W + L DE++FI
Sbjct: 5 EPILQENKDRFVIFPIQHNDLWEWYKKQEACIWTAEEIDLSEDANDWNNKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ SEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF+A E P + KKADWAL WID S +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKTVLFQAIENFPAIKKKADWALKWID-SPSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ + N++ +ER+ I+ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNKHIINQVPKERITEILVDALNIEREFITESL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L C KVY TNPFD+M++I ++GKTNFFEKRV E
Sbjct: 244 PASLIGMNSKLMTQYLEFVTDRLLVELECDKVYNSTNPFDFMDMIGMEGKTNFFEKRVSE 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V++S G+ D DF
Sbjct: 304 YQKAGVLNS--DKEGDSKISFDADF 326
>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
Length = 328
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/323 (62%), Positives = 257/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+LT NPDRF +FPI++ ++WE YKK EA FWTAEE+DLS+D+ W + L DE++F+
Sbjct: 6 EPILTENPDRFVIFPIKHDDLWEWYKKCEACFWTAEEIDLSEDLNDWNNKLNEDERYFVK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+A E P + +KADWAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKNKLFKALENFPAIKEKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCD+A L++ L NK+ + R++ I+ +A+ IER F+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNHHLINKVPKARIREILVDALNIERTFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L C K Y V+NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PASLIGMNAKLMTQYLEFVTDRLLVELQCEKEYNVSNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMS-SLNGNGGNHVFKMD 326
YQKA V++ + N N F D
Sbjct: 305 YQKAGVLNKDQDVNAQNISFDAD 327
>gi|17551968|ref|NP_497821.1| Protein RNR-2 [Caenorhabditis elegans]
gi|1172941|sp|P42170.1|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3873950|emb|CAA84688.1| Protein RNR-2 [Caenorhabditis elegans]
Length = 381
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 248/325 (76%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L +RF +FP+++ +IW YKKA ASFWT EEVDL +D+ WE + DE++FI+
Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 120
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+LAFFAASDGIV ENL RF EVQVSEAR FYGFQIAIENIHSEMYS L+ETYI++
Sbjct: 121 RILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDET 180
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF A + + KKADWAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 181 ERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKK 240
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS L+ KL+++R+ I+K+AV IE+EF+ +AL
Sbjct: 241 RGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFLTEAL 300
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD LL LGC K+Y NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 301 PVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKRVSE 360
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM N F ++ DF
Sbjct: 361 YQRPGVMV----NEAERQFDLEADF 381
>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
Length = 321
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 249/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L RF +FPI Y EIW MYKKA ASFWT +EVDLS+D+ W+ L +E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIA+ENIHSEMYSLL++TYI ++ E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+ + KK++WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S + + I+ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIITIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LGC KV+ TNPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCVLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|385302064|gb|EIF46214.1| ribonucleoside-diphosphate reductase small chain [Dekkera
bruxellensis AWRI1499]
Length = 409
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/323 (64%), Positives = 250/323 (77%), Gaps = 3/323 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL N RF MFPIQY +IW+MYKKAEASFWTAEE+DLS+D+ W + + A+E++FI+
Sbjct: 86 EPLLKENIHRFVMFPIQYDDIWQMYKKAEASFWTAEEIDLSKDLTDWNNKMNANERYFIS 145
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENLA FMK+VQ+ EARAFYGFQI +ENIHSE YSLLLETYI +
Sbjct: 146 RVLAFFAASDGIVDENLAQNFMKQVQLPEARAFYGFQIMVENIHSETYSLLLETYITDKK 205
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A T+P + +KA WAL WI+ + +AERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 206 ESDYLFNAIHTIPPIKEKALWALRWINNDDALYAERLVAFAAIEGVFFSGSFASIFWLKK 265
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL+S L++ S+ +K I+ EAV IE+ F DAL
Sbjct: 266 RGLMPGLTFSNELICRDEGLHTDFACLLFSHLKHPPSKVIIKXIMTEAVNIEKTFWSDAL 325
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +M+ Y+ F ADRLL ALGC KVY TNPFD+ME ISL GKTNFFEKRV +
Sbjct: 326 PVSLLGMNFDMMAXYVXFCADRLLIALGCEKVYNATNPFDFMENISLAGKTNFFEKRVSD 385
Query: 305 YQKASVMSS-LNGNGGNHVFKMD 326
YQKA VM+ L G+ + F D
Sbjct: 386 YQKAGVMAKELEGSNNDISFNXD 408
>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain, partial [Ascaris
suum]
Length = 376
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/324 (63%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP+RF +FPI+Y +IW+ YK+A ASFWT EEVDLS+D + WE+L+ E+ FI+
Sbjct: 57 EPLLANNPNRFVIFPIKYHDIWDFYKRAVASFWTVEEVDLSKDYQHWENLSDGERFFISR 116
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IENIHSEMYS ++ETYI++ +E
Sbjct: 117 VLAFFAASDGIVNENLVERFAQEVQVPEARFFYGFQIMIENIHSEMYSKMVETYIRDDNE 176
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ +LF A + KKADWAL WI D +AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 177 RKKLFNAINEFEFIKKKADWALKWIADKQAPYAERLIAFAAVEGIFFSGSFAAIFWLKKR 236
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACL++S L+ K ++ER+ I++EAV+IE+E++ +ALP
Sbjct: 237 GLMPGLTHSNELISRDEGLHRDFACLMFSHLKKKPNKERIYEIIREAVKIEQEYLTEALP 296
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIE+VAD LL L C K+Y + NPFD+M IS++ KTNFFEKRV EY
Sbjct: 297 VGLIGMNCELMSQYIEYVADHLLTELKCPKLYNMENPFDFMARISIEAKTNFFEKRVSEY 356
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V+S+ + F MD +F
Sbjct: 357 QKAGVLST----DIDKSFNMDAEF 376
>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
Length = 321
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 249/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L RF +FPI Y EIW MYKKA ASFWT +EVDLS+D+ W+ L +E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLSDWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIA+ENIHSEMYSLL++TYI ++ E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+ + KK++WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEYLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S E + I+KEAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNEIITIIIKEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LGC KV+ NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSINPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|403277257|ref|XP_003930289.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Saimiri boliviensis boliviensis]
Length = 668
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 253/329 (76%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP F +FPI+YP+IW+ YKK EASFWT +EVDLS+D+ WESL + +
Sbjct: 344 PRMQDEPLLRENPHHFVIFPIEYPDIWQTYKKGEASFWTTKEVDLSKDVWHWESLKPEGR 403
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAAS GIV ENL RF +EVQ++EA FYGFQ+A++NIHSE+YSLL++TYI
Sbjct: 404 YFISHVLAFFAASYGIVNENLVERFSQEVQITEAHCFYGFQMAMKNIHSEIYSLLIDTYI 463
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ +E+ LF A ET+PCV KKADWAL W+ D T+ E + AFA VEGIFFSGSF +IF
Sbjct: 464 KDPNEREFLFNAIETMPCVKKKADWALLWVGDKEATYGEHVAAFAAVEGIFFSGSFASIF 523
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNEL RDEGLHCDFACL++ +K SEERV+ I+ AV +E+EF+
Sbjct: 524 WLKKRGLMPGLTFSNELTGRDEGLHCDFACLMFKHQVHKPSEERVREIIISAVRMEQEFL 583
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG +V+ V NPFD+ME ISL+G TNFFEK
Sbjct: 584 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSRVFRVENPFDFMENISLEGNTNFFEK 643
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVG+YQ+ VMSS N F + DF
Sbjct: 644 RVGKYQRMGVMSSPTENS----FTLGADF 668
>gi|363754041|ref|XP_003647236.1| hypothetical protein Ecym_6011 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890873|gb|AET40419.1| hypothetical protein Ecym_6011 [Eremothecium cymbalariae
DBVPG#7215]
Length = 436
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/327 (63%), Positives = 250/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DI W + +T +E++FI
Sbjct: 110 DEPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTDNERYFI 169
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 170 SRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 229
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WA+ WI D F ERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 230 KESEFLFNAVETIPEIKEKAEWAIRWIQDEDALFGERLVAFAAVEGIFFSGSFAAIFWLK 289
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ LRNK + V+ I+ EAV+IE+ + DA
Sbjct: 290 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLRNKPDPKIVERIITEAVDIEKRYFIDA 349
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+P AL+GMN LMSQY+EFVADRLL ALG K + VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 350 IPVALLGMNAGLMSQYVEFVADRLLVALGNRKYFNVTNPFDFMENISLAGKTNFFEKRVS 409
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VM+ S F DEDF
Sbjct: 410 DYQKAGVMAKSSKQESETGAFTFDEDF 436
>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe 972h-]
gi|9297110|sp|P36603.2|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe]
Length = 391
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+E +L PNP RF +FPI+Y EIW+ YKKAEASFWTAEE+DLS+D+ W++ L ADE++FI
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLA+FAASDGIV ENL RF EVQ+ EAR YGFQI IENIHSE YSLLL+TYI+
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F A T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+++ + V+ I+ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K Y VTNPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQ A VMS + +H F +DEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>gi|374288410|ref|YP_005035495.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
Length = 322
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/325 (60%), Positives = 244/325 (75%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
+P+L PN DRF +FP++Y I+EMYK A FWTA+E+D + DI WE L DE+HFI H
Sbjct: 2 DPILAPNDDRFVLFPLKYHSIFEMYKNHMAVFWTADELDFASDITDWEKLNKDEQHFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF +VQ+ EAR FYGFQIA+ENIHSE YSLL++TY+K+ E
Sbjct: 62 ILAFFAASDGIVNENLALRFYNDVQIPEARCFYGFQIAMENIHSETYSLLIDTYVKDPKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A P V KKADWA+ W+ +FAERLIAFA +EGIFFSGSFC+I+WLKKRG
Sbjct: 122 KDELFHAVTHFPFVEKKADWAMKWMQSKRSFAERLIAFAAIEGIFFSGSFCSIYWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLL--RNKLSEERVKGIVKEAVEIEREFVCDAL 244
LMPGL SNE ISRDEGLHC+FAC ++ LL +L++E + I+ EAV IE+EF+ +A+
Sbjct: 182 LMPGLCTSNEFISRDEGLHCEFACHIHELLTPEEQLNKETITQIITEAVSIEKEFITEAI 241
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +MS+YIEFVAD L LGC K Y NPFDWMELISL+GKTNFFEKRV E
Sbjct: 242 PVSLIGMNADMMSRYIEFVADYWLNRLGCEKAYNTENPFDWMELISLEGKTNFFEKRVSE 301
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQK V+ G+ + F +D +F
Sbjct: 302 YQKPGVL----GDRAQNTFTLDAEF 322
>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 211/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 211/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
Length = 244
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/244 (83%), Positives = 217/244 (88%), Gaps = 1/244 (0%)
Query: 87 MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADW 146
M +VQV+EARAFYGFQIAIENIHSEMYSLLLETYI++ EK RLFRA +TVP V +KADW
Sbjct: 1 MSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADW 60
Query: 147 ALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 206
A+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC
Sbjct: 61 AMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 120
Query: 207 DFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADR 266
DFACLLY LLR KL E RV+ IV +AV+IEREFVCDALP ALVGMNG LMSQYIEFVADR
Sbjct: 121 DFACLLYDLLRGKLDEARVREIVADAVDIEREFVCDALPVALVGMNGDLMSQYIEFVADR 180
Query: 267 LLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNG-GNHVFKM 325
LL ALGC K+Y V NPFDWMELISLQGKTNFFEKRVG+YQKASVMSSLNG NHVF +
Sbjct: 181 LLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGDYQKASVMSSLNGGASANHVFSI 240
Query: 326 DEDF 329
DEDF
Sbjct: 241 DEDF 244
>gi|443927278|gb|ELU45786.1| ribonucleotide reductase small subunit [Rhizoctonia solani AG-1 IA]
Length = 457
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 249/334 (74%), Gaps = 20/334 (5%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL + RF +FPIQY EIW+MYKKAEASFWTAEE+DLS+D+ W++ L +E+HFI
Sbjct: 134 DEPLLKESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWDNKLNDNERHFI 193
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQ +EA ENIHSE YSLL++TYIK
Sbjct: 194 SHVLAFFAASDGIVNENLVERFSNEVQAAEA----------ENIHSETYSLLIDTYIKEP 243
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A ET+PC+ KKADWAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 244 AQREFLFDAIETIPCIKKKADWALKWISDRRSTFAERLVAFAAVEGIFFSGSFASIFWLK 303
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + E V+ I+ EAV IE+EF+ DA
Sbjct: 304 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRKRPHPETVRRIIVEAVAIEQEFLTDA 363
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QYIEFVADRLL ALG K Y TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 364 LPVGLIGMNARLMCQYIEFVADRLLVALGNTKEYNSTNPFDFMDMISLQGKTNFFEKRVS 423
Query: 304 EYQKASVMSS--------LNGNGGNHVFKMDEDF 329
+Y KA V ++ + +F +DEDF
Sbjct: 424 DYAKAGVKTTSTDPATEPTRTAASSKLFSLDEDF 457
>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 211/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
Length = 391
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+E +L PNP RF +FPI+Y EIW+ YKKAEASFWTAEE+DLS+D+ W++ L ADE++FI
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLA+FAASDGIV ENL RF EVQ+ EAR YGFQI IENIHSE YSLLL+TYI+
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F A T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+++ + +K I+ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKLLKPIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K Y VTNPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQ A VMS + +H F +DEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
Length = 392
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/326 (63%), Positives = 256/326 (78%), Gaps = 2/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+E +LTPNP RF MFPI+Y +IW+ YKKAEASFWTAEE+DLS+D+ W++ L DE++FI
Sbjct: 67 DEVVLTPNPRRFVMFPIEYHDIWQFYKKAEASFWTAEEIDLSKDLHDWDNKLNKDERYFI 126
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLA+FAASDGIV ENL +RF EVQ++EAR YGFQI IENIHSE YSLLL+TYI++
Sbjct: 127 STVLAYFAASDGIVNENLLSRFSSEVQIAEARCVYGFQIMIENIHSETYSLLLDTYIRDP 186
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F A T+ + KA WAL WI+ E+ +A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 187 YEKQRHFDAILTMGSIKAKAKWALRWIEDPESIYAVRLVAFAAVEGIFFSGSFASIFWLK 246
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEG+H DFACL++S L+++ ++ V+ I+ EAV IE+E+ DA
Sbjct: 247 KRGLMPGLTFSNELICRDEGVHTDFACLMFSHLKHRPGKKVVERIIIEAVNIEKEYFTDA 306
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QYIEFVADRLL +LG K Y VTNPFD+ME ISL GKTNFFEK+V
Sbjct: 307 LPVYLLGMNCDLMCQYIEFVADRLLLSLGNEKYYNVTNPFDFMENISLAGKTNFFEKKVS 366
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ A VM++ N + H+F ++EDF
Sbjct: 367 DYQIAGVMAAQNKDNDEHMFTVNEDF 392
>gi|388857936|emb|CCF48381.1| probable small subunit of ribonucleotide reductase [Ustilago
hordei]
Length = 421
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/322 (63%), Positives = 248/322 (77%), Gaps = 8/322 (2%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
RF +FPI++ EIW+MYKKAEASFWTAEE+DLS+D+ W++ L +E+HFI+HVLAFFAAS
Sbjct: 100 RFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 159
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
DGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYI+ +++ LF A
Sbjct: 160 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREFLFDAV 219
Query: 135 ETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+P V KKA+WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTF
Sbjct: 220 ETIPVVKKKAEWALRWINDRKATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 279
Query: 194 SNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
SNELISRDEGLH DFACLL+S L+ + + V I+ EAVEIE EF+ ++PCA++GMN
Sbjct: 280 SNELISRDEGLHTDFACLLFSHLKKRAHPDTVLKIISEAVEIEIEFLTQSIPCAMIGMNQ 339
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM-- 311
LMSQYI FVADRLL LG +G NPFD+M+ ISLQGKTNFFEK+V EY K V
Sbjct: 340 TLMSQYITFVADRLLTQLGNPVFWGAKNPFDFMDQISLQGKTNFFEKKVAEYAKTGVARR 399
Query: 312 -SSLNGNG---GNHVFKMDEDF 329
+G+G H F ++EDF
Sbjct: 400 EGEESGDGIQKNTHSFSLEEDF 421
>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
Length = 362
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/307 (66%), Positives = 246/307 (80%), Gaps = 2/307 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD-EKHFI 64
EEPLL + RF +FPIQY EIW MYKK EASFWTAEE+DLS+D+ WE D E+HFI
Sbjct: 42 EEPLLKDSISRFVLFPIQYHEIWAMYKKEEASFWTAEEMDLSKDLHDWEERMNDNERHFI 101
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EV+V EAR FYGFQI +EN+HSE YSLL++TYI++
Sbjct: 102 SHVLAFFAASDGIVNENLLTRFCGEVKVPEARCFYGFQIMMENVHSETYSLLIDTYIRDP 161
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ L A ET+PCV KKA+WAL WI D +FA RL+AF+ VEGIFFSGSF +IFWLK
Sbjct: 162 AQRTFLLNAVETIPCVRKKAEWALRWIADRRSSFAIRLVAFSAVEGIFFSGSFASIFWLK 221
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI+RDEG+H DFACLL + +R + E ++ I+KEAV IE+EF+ DA
Sbjct: 222 KRGLMPGLTFSNELITRDEGMHTDFACLLLTHMRRRPHPEVIEMIIKEAVAIEKEFLTDA 281
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KV+ TNPFD+M++ISLQGKTNFFEKRV
Sbjct: 282 LPVSLIGMNADLMCQYIEFVADRLLVALGNDKVWNATNPFDFMDMISLQGKTNFFEKRVS 341
Query: 304 EYQKASV 310
+Y+ A+V
Sbjct: 342 DYKIAAV 348
>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 211/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 211/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
Length = 401
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 250/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIWE YK+AEASFWTAEE+DLS+D+ W + + +E+ FI
Sbjct: 75 DEPLLVENKRRFVLFPIKYHEIWEAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ +LAFFAASDGIV ENL F EVQ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 135 SRILAFFAASDGIVNENLVENFSAEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WA+ WI D F ERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 195 KESEFLFNAIETIPQIKEKAEWAIRWIQDDDALFGERLVAFAAVEGVFFSGSFAAIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+NK + E V+ I+ EAVEIE+ + DA
Sbjct: 255 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPNPEIVEKIITEAVEIEKRYFMDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFVADRLL ALG K + VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVSLLGMNADLMNQYVEFVADRLLVALGNKKYFNVTNPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA V++ S N + F DEDF
Sbjct: 375 DYQKAGVIAKSSNTEAQDGAFAFDEDF 401
>gi|389747382|gb|EIM88561.1| hypothetical protein STEHIDRAFT_54000 [Stereum hirsutum FP-91666
SS1]
Length = 382
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 247/325 (76%), Gaps = 15/325 (4%)
Query: 1 MPSIPE-------------EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLS 47
+PS+P+ EPLL + RF +FPIQY EIW MYKKAEASFWTAEE+D+S
Sbjct: 18 LPSLPQTRFVGEVDLPEEREPLLIESKRRFVLFPIQYHEIWRMYKKAEASFWTAEEIDMS 77
Query: 48 QDIRQW-ESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIE 106
+D+ W L +E++FI+H+LAFFAASDGIV ENL RF EVQ +EAR FYGFQI +E
Sbjct: 78 KDLMDWNHRLNDNERYFISHILAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMME 137
Query: 107 NIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFA 165
NIHSE YS L+ +YI + +E+ LF A ET+PCV +KADWAL WI D +FAERL+AFA
Sbjct: 138 NIHSETYSQLINSYIADPEEREFLFDAIETIPCVKRKADWALRWIEDRRSSFAERLVAFA 197
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERV 225
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ L+ + E V
Sbjct: 198 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFGHLKRRPHPEVV 257
Query: 226 KGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDW 285
I+ EAV IE+EF+ DALP L+GMN ALM QYIEFVADRLL ALG K Y V NPFD+
Sbjct: 258 SIIISEAVAIEQEFLTDALPVGLIGMNAALMCQYIEFVADRLLVALGNPKHYHVNNPFDF 317
Query: 286 MELISLQGKTNFFEKRVGEYQKASV 310
M++ISL+GKTNFFEKRV +Y KA V
Sbjct: 318 MDMISLEGKTNFFEKRVSDYAKAGV 342
>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
Length = 297
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/301 (67%), Positives = 242/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+H+LAFFAASDGIV ENL RF +E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L NK SE+RV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
G LG K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 GELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|393911948|gb|EFO23522.2| ribonucleoside-diphosphate reductase [Loa loa]
Length = 365
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 249/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL NP+RF +FPI++ +IW+ YKKA ASFWT +EVDLS+D R WE+L E+HFI+
Sbjct: 46 EILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISR 105
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYS +++TYI++ +
Sbjct: 106 VLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSEMYSKMIDTYIRDQKQ 165
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KS LF A V KKADWAL WI D +AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 166 KSLLFNAIYEFEFVKKKADWALCWIADIKAPYAERLIAFAAVEGIFFSGSFAAIFWLKKR 225
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLY+ ++NK SEER+ I++EAV+IE+E++ +ALP
Sbjct: 226 GLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEERIYQIIREAVDIEKEYLTEALP 285
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N LM QYIE+VAD LL L C K+Y NPFD+ME IS++ KTNFFEKRV EY
Sbjct: 286 VDLIGINCKLMCQYIEYVADHLLTELHCAKMYYSDNPFDFMERISIEAKTNFFEKRVSEY 345
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V+ S G FK+D DF
Sbjct: 346 QKAGVLCSEEGKS----FKLDSDF 365
>gi|402589750|gb|EJW83681.1| ribonucleoside-diphosphate reductase [Wuchereria bancrofti]
Length = 365
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 249/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL NP+RF +FPI++ +IW YKKA ASFWT +EVDLS+D R WE+L E+HFI+
Sbjct: 46 EILLAENPNRFVIFPIKFHDIWGFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISR 105
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IENIHSEMYS +++TYI++ +
Sbjct: 106 VLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIRDQKQ 165
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KS LF A V KKADWAL WI D + ++AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 166 KSLLFNAIYEFEFVKKKADWALCWIADINASYAERLIAFAAVEGIFFSGSFAAIFWLKKR 225
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLY+ ++NK SE R+ I++EAV+IE+E++ +ALP
Sbjct: 226 GLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEGRIYQIIREAVDIEKEYLTEALP 285
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N LM QYIE+VAD LL L C K+Y NPFD+ME IS++ KTNFFEKRV EY
Sbjct: 286 VDLIGINCKLMCQYIEYVADHLLTELHCAKIYHSDNPFDFMERISIEAKTNFFEKRVSEY 345
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V+S G FK+D DF
Sbjct: 346 QKAGVLSGEEGKS----FKLDSDF 365
>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
Length = 321
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/324 (63%), Positives = 248/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L RF +FPI Y EIW MYKKA ASFWT +EVDLS+D+ W+ L +E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIA+ENIHSEMYSLL++TYI ++ E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+ + KK++WA WI + +F ERLIAFA VEGIFF GSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFCGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S + + I+ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIITIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LGC KV+ TNPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCVLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEV VSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVHVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
Length = 352
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 239/323 (73%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + + +IW MYKKAEASFW EE+DLSQD R WESL E+HFI +
Sbjct: 34 EPMLKYSRENRNELKELIKDIWSMYKKAEASFWVTEEIDLSQDTRDWESLKDPERHFIKY 93
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV+ENLA F++E+Q+ EAR +Y FQ++IE IHSE YSLL++ YI E
Sbjct: 94 VLAFFAASDGIVMENLAVNFLREIQIPEARMYYAFQMSIEQIHSETYSLLIDRYITEIKE 153
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A + V KKA+WA W++ +FAER+I F VEGI FSGSFCAIFWLKKRG
Sbjct: 154 RQMLFEAISHIEAVKKKAEWATKWMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRG 213
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACL+Y L+ KL RV+ I+ EAVE+ER F+CD+LP
Sbjct: 214 LMPGLTFSNELISRDEGLHADFACLIYKALKFKLPAPRVQQIISEAVEVERNFLCDSLPV 273
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM+QYIEFVADRLL AL K+Y V+NPFDWM+LISLQGKTNFFEKRVGEYQ
Sbjct: 274 DLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVSNPFDWMDLISLQGKTNFFEKRVGEYQ 333
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
A VM N + F ++ DF
Sbjct: 334 MAGVMV----NQDDQKFDLNADF 352
>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
NW-LW]
Length = 321
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L RF +FPI Y EIW MYKKA ASFWT +EVDLS+D+ W+ L+ +E++FI +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLSNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ SEAR FYGFQIA+ENIHSEMYSLL++TYI ++ E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+ + KK++WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S E + I+ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNEIITIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LGC KV+ TNPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLAFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|401625096|gb|EJS43121.1| rnr2p [Saccharomyces arboricola H-6]
Length = 399
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQV EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQVPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFNFNEDF 399
>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
Length = 325
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/324 (63%), Positives = 243/324 (75%), Gaps = 7/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL PN +R+ +FPI+Y +IW+MYKKAE+SFWT EEVDL+ D W SL E++FI++
Sbjct: 8 EPLLNPNEERYVLFPIKYHDIWQMYKKAESSFWTVEEVDLTADRNDWLSLNDKERYFISN 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV NL RF EV + EA+ FYGFQ+AIENIHSEMYSLL++ YI + DE
Sbjct: 68 ILAFFAASDGIVNANLVERFANEVTILEAKCFYGFQVAIENIHSEMYSLLIDAYITDQDE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A T+PC+ KKADWAL WI D +FA R+IAFACVEGIFFSG+F +IFWLK R
Sbjct: 128 KTHLFNAISTIPCIKKKADWALKWIKDEKSSFATRVIAFACVEGIFFSGAFASIFWLKNR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL L NK + IVKEAVEIE+EF+ +LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLNQYLINK--SPHILDIVKEAVEIEKEFLGVSLP 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LG K Y NPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCKLMCQYIEFVADRLLINLGLEKYYNTLNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V GN F +D +F
Sbjct: 306 QKAFV----GIENGNDTFSLDAEF 325
>gi|402878877|ref|XP_003903090.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Papio anubis]
Length = 297
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 241/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L NK SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
LG K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 VELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|365759956|gb|EHN01709.1| Rnr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKFYNVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
gi|349579170|dbj|GAA24333.1| K7_Rnr2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 399
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
gi|365764844|gb|EHN06363.1| Rnr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
Length = 399
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Nomascus leucogenys]
gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan
troglodytes]
gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
sapiens]
gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 241/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L NK SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
LG KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 VELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 399
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
Length = 323
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 250/327 (76%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ EPLL NPDRF +FPIQ+ +IW MYK+A ASFWT EEVDLS D+ W++L +E+ F
Sbjct: 1 MSSEPLLVNNPDRFVIFPIQHGDIWRMYKQAVASFWTVEEVDLSYDLIDWKNLKPEERRF 60
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+++LAFFA SDGIV ENL +F +EVQ+ EAR FYGFQIAIENIHSEMYSLL++TYI +
Sbjct: 61 ISYILAFFAVSDGIVNENLVEKFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIDD 120
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++EK RLF + T+ CV KK++WAL WI+ S + ERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 121 NNEKKRLFSSMRTMDCVRKKSEWALKWINDSAPYGERLVAFAAVEGIFFSGSFAAIFWLK 180
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCD 242
KRGLMPGLTFSNELISRDEGLHCDFACLL++ L +K S++RV I+ AV +E EF+ +
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCDFACLLFTNYLSHKPSQDRVYEIIDSAVSVETEFLTE 240
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
AL L+GMN M +YI+FV+DRLL +LG K Y V NPF +ME ISL+GK NFFEKRV
Sbjct: 241 ALSIDLIGMNSKSMIEYIKFVSDRLLVSLGFSKKYNVENPFSFMENISLEGKANFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
YQK VMS+ N +F D +F
Sbjct: 301 SNYQKMGVMSTKEEN----IFTTDAEF 323
>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|367014807|ref|XP_003681903.1| hypothetical protein TDEL_0E04490 [Torulaspora delbrueckii]
gi|359749564|emb|CCE92692.1| hypothetical protein TDEL_0E04490 [Torulaspora delbrueckii]
Length = 399
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 247/327 (75%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL N RF +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 73 DEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 132
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 133 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 192
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A E +P + +KA+WA+ WI SE+ FAERL+AFA +EG FFSGSF AIFWLK
Sbjct: 193 KESDFLFNAIENIPQIKEKAEWAIRWIQDSESIFAERLVAFAAIEGYFFSGSFAAIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+NK ++ I+ EAVEIE+ + DA
Sbjct: 253 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPSIIEKIITEAVEIEKRYFIDA 312
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFVADRLL A G K + VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 313 LPVSLLGMNADLMNQYVEFVADRLLVAFGNKKFFNVTNPFDFMENISLAGKTNFFEKRVS 372
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VM+ S F DEDF
Sbjct: 373 DYQKAGVMAKSSKEESETGAFTFDEDF 399
>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|444322760|ref|XP_004182021.1| hypothetical protein TBLA_0H02160 [Tetrapisispora blattae CBS 6284]
gi|387515067|emb|CCH62502.1| hypothetical protein TBLA_0H02160 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/321 (65%), Positives = 247/321 (76%), Gaps = 4/321 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
E LL + R ++PI YP+I+E YK+AEASFWTAEE+DLS+D+ W + +T +E+ FI+
Sbjct: 79 EVLLNKDKKRKIIYPILYPDIYEAYKRAEASFWTAEEIDLSKDLHDWNNRMTPNERFFIS 138
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EVQV EA+ FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 139 RVLAFFAASDGIVNENLVENFSVEVQVPEAKMFYGFQIMIENIHSETYSLLIDTYIKDPR 198
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF A ET+P + +KA WAL WI+ + TFAERL+AFA +EGIFFSGSF AIFWLKK
Sbjct: 199 ESTFLFNAIETIPQIKEKAIWALRWINAEDATFAERLVAFASIEGIFFSGSFAAIFWLKK 258
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+GLMPGLTFSNELI RDEGLH DFACLL+S L NK+ E V+ IV EAVEIE+ + DAL
Sbjct: 259 KGLMPGLTFSNELICRDEGLHTDFACLLFSHLENKIKPEIVEKIVTEAVEIEKGYFRDAL 318
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM+QY+EFVADRLL A G KVY V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 319 PVALLGMNADLMNQYVEFVADRLLIAFGNPKVYNVENPFDFMENISLAGKTNFFEKRVSD 378
Query: 305 YQKASVM--SSLNGNGGNHVF 323
YQKASVM SS GG F
Sbjct: 379 YQKASVMAVSSNKETGGAMAF 399
>gi|392575953|gb|EIW69085.1| hypothetical protein TREMEDRAFT_31348 [Tremella mesenterica DSM
1558]
Length = 446
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/334 (60%), Positives = 245/334 (73%), Gaps = 20/334 (5%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
RF +FPI+Y EIW+ YK ++ASFWTAEE+DL D+ W E LT +E+ FI +LAFFAAS
Sbjct: 113 RFVLFPIRYREIWQAYKASQASFWTAEELDLVHDMHDWNERLTENERFFILRILAFFAAS 172
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
DGIV EN+ +F EVQ++EARAFY FQ +E +HSE YSLL+ETY++++ EK LFR
Sbjct: 173 DGIVGENIVEQFALEVQIAEARAFYSFQSMMEQVHSETYSLLIETYVRDTQEKDFLFRGI 232
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E +PC+ KKADWAL +I F RL+AFACVEGIFFSGSF AIFWLKKRGLMPGLTFS
Sbjct: 233 ENIPCIRKKADWALKYITPELPFRVRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFS 292
Query: 195 NELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGA 254
NELISRDEG H DFACLLY L ++ S E+V IV EAV IE+EF+ DALP L+G+N +
Sbjct: 293 NELISRDEGTHTDFACLLYDHLHHRCSTEQVHDIVSEAVVIEKEFLVDALPSHLIGINAS 352
Query: 255 LMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA------ 308
LM QYIEFVADRL+ +LGC K+YG TNPFDWMELISLQGK NFFE RV YQKA
Sbjct: 353 LMCQYIEFVADRLVESLGCPKIYGATNPFDWMELISLQGKANFFESRVSSYQKAGVSRSG 412
Query: 309 -------------SVMSSLNGNGGNHVFKMDEDF 329
+V +S + + + VF++D DF
Sbjct: 413 RPGTTTTSTGADGTVTTSDSTHMSDRVFRVDADF 446
>gi|401841001|gb|EJT43584.1| RNR2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 367
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 43 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 102
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 103 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 162
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 163 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 222
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 223 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 282
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 283 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKFYNVENPFDFMENISLAGKTNFFEKRVS 342
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 343 DYQKAGVMSKSTNQEAG--AFTFNEDF 367
>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
Length = 325
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/324 (60%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL N DRF +FPI + +I+E YKKAEAS W E+D+S D W LT +E+HFI +
Sbjct: 3 EPLLIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA +DGIV ENL F E+Q EAR FYG Q+ IEN+H+E YS++L++ +++ DE
Sbjct: 63 ILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFRA T+ + KADWAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + +KL E V I+ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N MS YI+FVADRLL +LG K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYAKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 210/223 (94%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYYVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|410083375|ref|XP_003959265.1| hypothetical protein KAFR_0J00620 [Kazachstania africana CBS 2517]
gi|372465856|emb|CCF60130.1| hypothetical protein KAFR_0J00620 [Kazachstania africana CBS 2517]
Length = 391
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL +P+R +FPI++ EIW+ YK+AEASFWTAEE+DL +D+ W + + +EK FI
Sbjct: 67 EEPLLVADPNRKTVFPIKFHEIWQAYKRAEASFWTAEEIDLGKDLHDWNNRMNPNEKFFI 126
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDG+V ENL F EV + EA+AFYGFQI IENIHSE YSLL++TYIK+
Sbjct: 127 SRVLAFFAASDGLVNENLVENFSAEVAIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDP 186
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A +T+P + +KA WAL WI+ +E+ FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 187 KESEFLFNAIDTIPQIKEKALWALRWINDAESPFAERLVAFAAIEGVFFSGSFASIFWLK 246
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L++K + E V+ IV EAV IE+++ DA
Sbjct: 247 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKPAPEVVERIVTEAVAIEKQYFIDA 306
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFVADRLL A G K YGV NPFD+ME ISL GKTNFFEKRV
Sbjct: 307 LPVSLLGMNADLMNQYVEFVADRLLVAFGNKKFYGVENPFDFMENISLAGKTNFFEKRVS 366
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ A VMS G F ++EDF
Sbjct: 367 DYQYAGVMSKTTGTEEG-AFNINEDF 391
>gi|347481850|gb|AEO97836.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 84]
gi|347600475|gb|AEP14962.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 88]
Length = 325
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL N DRF +FPI + +I+E YKKAEAS W E+D+S D W LT +E+HFI +
Sbjct: 3 EPLLIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA +DG+V ENL F E+Q EAR FYG Q+ IEN+H+E YS++L++ +++ DE
Sbjct: 63 ILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFRA T+ + KADWAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + +KL E V I+ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N MS YI+FVADRLL +LG K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYAKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
Length = 297
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/301 (67%), Positives = 240/301 (79%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL++ L NK EERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 269 GALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDED 328
LG KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 VELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans CBS 6340]
Length = 403
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 247/327 (75%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N RF +FPI+Y EIW+ YK+AEASFWTAEE+DLS+D+ W + + +E+ FI
Sbjct: 77 EEPLLMENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFI 136
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ V+AFFAASDGIV ENL F EVQ EA+ FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 137 SRVIAFFAASDGIVNENLVENFSAEVQSPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 196
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WA+ WI D FAERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 197 KESDFLFNAIETIPQIKEKAEWAIRWIQDEDALFAERLVAFAAVEGVFFSGSFAAIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+NK ++ I+ EAVEIE+ + DA
Sbjct: 257 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIIERIITEAVEIEQRYFRDA 316
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFVADRLL ALG K Y VTNPFD+ME ISL GKTNFFEKRV
Sbjct: 317 LPVSLLGMNADLMNQYVEFVADRLLVALGNQKFYNVTNPFDFMENISLAGKTNFFEKRVS 376
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VM+ S F DEDF
Sbjct: 377 DYQKAGVMAKSTKAETEGGEFAFDEDF 403
>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
gi|1172946|sp|P09938.2|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
AltName: Full=Ribonucleotide reductase R2 subunit 1;
AltName: Full=Ribonucleotide reductase small subunit 1
gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
cerevisiae]
gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
gi|392298407|gb|EIW09504.1| Rnr2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 399
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 246/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 375 DYQKAGVMSKSTKQEAG--AFTFNEDF 399
>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 399
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 246/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASD IV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDSIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 99B1]
Length = 325
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L N DRF +FPI + +I+E YKKAEAS W E+D+S D W LT +E+HFI +
Sbjct: 3 EPILIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA +DG+V ENL F E+Q EAR FYG Q+ IEN+H+E YS++L++ +++ DE
Sbjct: 63 ILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFRA T+ + KADWAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + +KL E V I+ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N MS YI+FVADRLL +LG K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYAKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|347482302|gb|AEO98243.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 203]
gi|347601085|gb|AEP15571.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 207]
gi|347601558|gb|AEP16043.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 208]
gi|357972640|gb|AET97913.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 201]
Length = 325
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPL+ N DRF +FPI + +I+E YKKAEAS W E+D+S D W LT +E+HFI +
Sbjct: 3 EPLIIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA +DGIV ENL F E+Q EAR FYG Q+ IEN+H+E YS++L++ +++ DE
Sbjct: 63 ILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFRA T+ + KADWAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + +KL E V I+ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITHAVELERLFICEALP 242
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N MS YI+FVADRLL +LG K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYEKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
Length = 419
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 246/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 95 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 154
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 155 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 214
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 215 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 274
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 275 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 334
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 335 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 394
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 395 DYQKAGVMSKSTKQEAG--AFTFNEDF 419
>gi|357289644|gb|AET72957.1| ribonucleoside-diphosphate reductase small subunit [Phaeocystis
globosa virus 12T]
gi|357292439|gb|AET73775.1| ribonucleoside-diphosphate reductase small subunit [Phaeocystis
globosa virus 14T]
Length = 325
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/304 (64%), Positives = 238/304 (78%), Gaps = 1/304 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLLTP+ +RF MFPI+ EIW+MYKK + FWT+ EVDLS+D WE+LT DEKHFI+
Sbjct: 7 EPLLTPDDNRFVMFPIKDDEIWQMYKKQQDLFWTSTEVDLSKDPAHWEALTGDEKHFISM 66
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIVLENL RFM EVQ++EARAFYG QIA+ENIHS YS L++TYIK++ +
Sbjct: 67 ILAFFAASDGIVLENLGTRFMGEVQLAEARAFYGLQIAMENIHSITYSTLIDTYIKDTVQ 126
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A PC+ KK+DWA+ WI D +FA RL+AFA VEGIFFSG+FC+IFWLKKR
Sbjct: 127 KHKLFNAISEFPCIKKKSDWAIKWIQDKRASFATRLVAFAVVEGIFFSGAFCSIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
G++PGL FSNELISRDE LH +FA LL+S L L + +++ I++EAVEIE EF+ ALP
Sbjct: 187 GILPGLCFSNELISRDEALHTEFAVLLHSKLERPLKKNKIEEIIREAVEIEVEFINSALP 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM +YIEFVADRL LG K+YG NPFDWME IS++ KTNFFE RV EY
Sbjct: 247 CRLIGMNDVLMQRYIEFVADRLAVQLGGDKIYGSANPFDWMESISIESKTNFFEARVAEY 306
Query: 306 QKAS 309
A+
Sbjct: 307 SLAT 310
>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/223 (90%), Positives = 209/223 (93%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 409
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/317 (62%), Positives = 244/317 (76%), Gaps = 3/317 (0%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
RF +FPI++ ++W MYK+ ASFWT +E+DLS D+ W E L +E+HFI+ VLAFFA +
Sbjct: 93 RFSLFPIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGA 152
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
DGIV+ENLA RF +EV V EARAFYGFQ+A+E IH E Y LL+++YI + ++ LF A
Sbjct: 153 DGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAH 212
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
VP V KKA WA +I +FAERL+AFA VEGIFFSG+FC+IFWLKKRGLMPGLTFS
Sbjct: 213 TKVPSVEKKARWAQRYIGSDASFAERLVAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFS 272
Query: 195 NELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGA 254
NELISRDEGLHC FAC LYS L KLSE + ++ EAVE+E+ FVCDALP L+GMN +
Sbjct: 273 NELISRDEGLHCSFACQLYSKLERKLSETDMHKLIGEAVEVEKGFVCDALPVGLIGMNAS 332
Query: 255 LMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL 314
LMSQY+EFVADRLL LG +YG NPFDWM++ISL+GKTNFFEKRVGEYQK+ VM+SL
Sbjct: 333 LMSQYVEFVADRLLHDLGYRTLYGSKNPFDWMDMISLEGKTNFFEKRVGEYQKSGVMASL 392
Query: 315 NGN--GGNHVFKMDEDF 329
+ + G F +D DF
Sbjct: 393 SDDHTHGRKSFNLDADF 409
>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
gattii WM276]
Length = 430
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 245/329 (74%), Gaps = 8/329 (2%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHV 67
+L + RF +FPI+Y EIW+ YK+A+ASFWTAEE+D D+ W + +T E+ FI +
Sbjct: 102 ILRESDSRFVLFPIKYNEIWQAYKRAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRI 161
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIV EN+ ++F EVQ++EARAFY FQ IE +HSE YSLL+ETY++++ EK
Sbjct: 162 LAFFAASDGIVGENIVSQFSLEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEK 221
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
LFR E +PC+ +KADWAL +I F RL+AFACVEGIFFSGSF AIFWLKKRGL
Sbjct: 222 DFLFRGMENIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGL 281
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEG+H DFACLLY+ L+++ S + V IV EA+ IE++F+ DALPCA
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHRIVSEALVIEKQFLTDALPCA 341
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+G+N LM QY+EFVADRL+ LG K+Y TNPFDWMELISLQGK NFFE RV YQK
Sbjct: 342 LIGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFESRVSAYQK 401
Query: 308 ASVMSSLNGNG-------GNHVFKMDEDF 329
A+V + +G VF+ D DF
Sbjct: 402 ANVSRTATPSGQKEDERLTRRVFRTDADF 430
>gi|345110753|pdb|3OLJ|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110754|pdb|3OLJ|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110755|pdb|3OLJ|C Chain C, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110756|pdb|3OLJ|D Chain D, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
Length = 286
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/284 (69%), Positives = 235/284 (82%), Gaps = 1/284 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E++F
Sbjct: 3 VEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYF 62
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 63 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKD 122
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWL
Sbjct: 123 PKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWL 182
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+ +
Sbjct: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTE 242
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWM 286
ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+M
Sbjct: 243 ALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFM 286
>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|51701822|sp|Q8SRR2.1|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
Length = 325
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 251/324 (77%), Gaps = 7/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL P +RF + PI+Y +IW+MYKKAE+SFWT EEV L +DI W L A E+HFI++
Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISY 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV NL RF EV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+++DE
Sbjct: 68 VLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A T+P V +KADWA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 KNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+K +V +AVEIE++F+ ++LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSESLP 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM +YIEFVADRLL LG +VY TNPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V GN F++D DF
Sbjct: 306 QKAFV----GIENGNDSFRIDVDF 325
>gi|227541|prf||1706181A ribonucleotide reductase
Length = 290
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/294 (69%), Positives = 238/294 (80%), Gaps = 5/294 (1%)
Query: 37 SFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEAR 96
SFWTAEEVDLS+DI+ WESL +E++FI+HVLAFFAASDGIV ENL RF +EVQ++EAR
Sbjct: 1 SFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 60
Query: 97 AFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSE 155
FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV KKADWAL WI D
Sbjct: 61 CFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA 120
Query: 156 TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 215
T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 121 TYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKH 180
Query: 216 LRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGK 275
L +K SEERV+ I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG K
Sbjct: 181 LVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSK 240
Query: 276 VYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 241 VFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 290
>gi|449329429|gb|AGE95701.1| ribonucleoside diphosphate reductase small chain [Encephalitozoon
cuniculi]
Length = 325
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 251/324 (77%), Gaps = 7/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL P +RF + PI+Y +IW+MYKKAE+SFWT EEV L +DI W L A E+HFI++
Sbjct: 8 ELLLDPREERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISY 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV NL RF EV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+++DE
Sbjct: 68 VLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A T+P V +KADWA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 KNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+K +V +AVEIE++F+ ++LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSESLP 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM +YIEFVADRLL LG +VY TNPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V GN F++D DF
Sbjct: 306 QKAFV----GIENGNDSFRIDVDF 325
>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/223 (90%), Positives = 209/223 (93%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL W+DGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWMDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 394
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/326 (61%), Positives = 249/326 (76%), Gaps = 5/326 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLLTP+ R ++PI+YPE+W+ YKK+ ASFWTAEE+DLS+D+ W + + +E+ FI+
Sbjct: 71 EPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNKMNENERFFIS 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EVQ+ EA++ Y FQI +ENIHSE YSLL+ETY K+ +
Sbjct: 131 RVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFKDPE 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A + +P + KKADWA+ WI + +AERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EADFLFNAIDNIPFIRKKADWAIRWIQSEDALYAERLVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L+NK S E ++ I+ EAV+IE+E+ DAL
Sbjct: 251 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSSEIIEKIITEAVDIEKEYFSDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QY+EFVADRLL A G K Y VTNPFD+ME ISL GKTNFFEKRV +
Sbjct: 311 PVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSD 370
Query: 305 YQKASVMSSL-NGNGGNHVFKMDEDF 329
YQKA VM + N N +F D+DF
Sbjct: 371 YQKAGVMEKVENKNEKTGLF--DQDF 394
>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/223 (90%), Positives = 209/223 (93%)
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A R MKEVQVSEARAFYGFQIAIENI SEMYSLLLETYIK+S+EK+RLF A ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVKGIVK+AV+IEREFV DALPCALVGMNG LMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALGCGKVY V NPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYYVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|367002221|ref|XP_003685845.1| hypothetical protein TPHA_0E03210 [Tetrapisispora phaffii CBS 4417]
gi|357524144|emb|CCE63411.1| hypothetical protein TPHA_0E03210 [Tetrapisispora phaffii CBS 4417]
Length = 401
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/325 (60%), Positives = 248/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL + R ++PI+YP+++E YK+AEASFWTAEE+DL +D+ W + + +EK FI+
Sbjct: 77 EPLLVEDDSRKVLYPIKYPDVYEAYKRAEASFWTAEEIDLGKDLHDWNNRMNENEKFFIS 136
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F E ++ EA+ FYGFQI IENIHSE YSLL++TY+K+
Sbjct: 137 RVLAFFAASDGIVNENLTENFSVEAKIPEAKLFYGFQIMIENIHSETYSLLIDTYVKDPK 196
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A ET+P + +KA+WAL WI+ SE FAERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 197 ESQFLFNAIETIPQIKEKAEWALRWINDSEALFAERLVAFAAIEGVFFSGSFASIFWLKK 256
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFAC+L+S ++NK S E V+ IV EAVEIE+ + DAL
Sbjct: 257 RGLMPGLTFSNELICRDEGLHTDFACILFSHIKNKPSPEIVEKIVTEAVEIEKRYFLDAL 316
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL A G K + V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 317 PVSLLGMNADLMNQYVEFVADRLLVAFGNKKYFKVENPFDFMENISLAGKTNFFEKRVSD 376
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ A V+S + + F ++EDF
Sbjct: 377 YQFAGVISKSSNTESENPFSLEEDF 401
>gi|403214437|emb|CCK68938.1| hypothetical protein KNAG_0B05040 [Kazachstania naganishii CBS
8797]
Length = 395
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/326 (61%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFI 64
EEP++ + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+D+ W + +EK FI
Sbjct: 71 EEPIMVGDKNRHTVFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNVRMNPNEKFFI 130
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDG+V ENL F EV + EA+AFYGFQI IENIHSE YSLL++TYIK+
Sbjct: 131 SRVLAFFAASDGLVNENLVENFSAEVNIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDP 190
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A ET+P + +KA+WAL WI SE+ FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 191 KESEFLFNAIETIPQIKEKAEWALRWIGDSESVFAERLVAFAAIEGVFFSGSFASIFWLK 250
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L++K V+ IV EAVEIE+ + DA
Sbjct: 251 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKPDPSVVERIVTEAVEIEKRYFLDA 310
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K + V NPFD+ME ISL GKTNFFEKRV
Sbjct: 311 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKYFKVENPFDFMENISLAGKTNFFEKRVS 370
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQKA VM+ F + EDF
Sbjct: 371 DYQKAGVMAQATKEETG-AFNLQEDF 395
>gi|429966031|gb|ELA48028.1| hypothetical protein VCUG_00451 [Vavraia culicis 'floridensis']
Length = 325
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/330 (62%), Positives = 243/330 (73%), Gaps = 6/330 (1%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M PEE LLT +++ +FP+ ++W+MYK+A +SFWT EEVDLS+DI W L DE
Sbjct: 1 MSHQPEESLLTEPKNKYTLFPLTNQDVWQMYKQALSSFWTVEEVDLSKDIDDWNRLNGDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI++VLAFFAASDGIV ENL F +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TY
Sbjct: 61 RHFISYVLAFFAASDGIVNENLLENFSREVQLKEARCFYGFQIMIENVHSEMYSLLIDTY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +EK LF A + V +KA+W WI D FA R+IAFACVEG+FFSGSF +I
Sbjct: 121 IKDQEEKDFLFNAIANINTVKRKAEWCFKWINDKDSDFATRVIAFACVEGLFFSGSFASI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH FA L+ L + +E+V IVKEAVEIE EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHYQFAVLMNKTLIGQCPKEKVLEIVKEAVEIEEEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
V D+LP +L+GMN LM QYIEFVAD +L LG G+VY VTNPFD+ME ISL GKTNFFE
Sbjct: 241 VSDSLPVSLIGMNCKLMCQYIEFVADGILVDLGIGRVYNVTNPFDFMENISLFGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
KRV EYQK V G FK DEDF
Sbjct: 301 KRVAEYQKGYV-----GIENEQTFKTDEDF 325
>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
Length = 296
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/300 (65%), Positives = 231/300 (77%), Gaps = 4/300 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFW EE+DLSQD R WESL E+HFI +VLAFFAASDGIV+ENLA F++E
Sbjct: 1 MYKKAEASFWVTEEIDLSQDTRDWESLKDPERHFIKYVLAFFAASDGIVMENLAVNFLRE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
+Q+ EAR +Y FQ++IE IHSE YSLL++ YI + E+ LF A + V KKA+WA
Sbjct: 61 IQIPEARMYYAFQMSIEQIHSETYSLLIDRYITDIKERQMLFEAISHIEAVKKKAEWATK 120
Query: 150 WIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
W++ +FAER+I F VEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH DFA
Sbjct: 121 WMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHADFA 180
Query: 210 CLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLG 269
CL+Y L+ KL RV+ I+ EAVE+ER F+CD+LP L+GMN LM+QYIEFVADRLL
Sbjct: 181 CLIYKALKFKLPAPRVQQIISEAVEVERNFLCDSLPVDLIGMNSRLMAQYIEFVADRLLF 240
Query: 270 ALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
AL K+Y V+NPFDWM+LISLQGKTNFFEKRVGEYQ A VM N + F ++ DF
Sbjct: 241 ALDIPKIYNVSNPFDWMDLISLQGKTNFFEKRVGEYQMAGVMV----NQDDQKFDLNADF 296
>gi|343428030|emb|CBQ71554.1| probable small subunit of ribonucleotide reductase [Sporisorium
reilianum SRZ2]
Length = 425
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/321 (62%), Positives = 246/321 (76%), Gaps = 7/321 (2%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
RF +FPI++ EIW+MYKKAEASFWTAEE+DLS+D+ W++ L +E+HFI+HVLAFFAAS
Sbjct: 105 RFVLFPIRFNEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 164
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
DGIV ENL RF EVQ +EAR FYGFQI +ENIHSE YSLL++TYI+ +++ LF A
Sbjct: 165 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREFLFDAV 224
Query: 135 ETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+P V +KADWAL WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTF
Sbjct: 225 ETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 284
Query: 194 SNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
SNELISRDEGLH DFACLL+S L+ + + V I+ EAV+IE EF+ A+P A++GM+
Sbjct: 285 SNELISRDEGLHTDFACLLFSHLKKRAHPDTVLKIITEAVDIEIEFLTTAIPVAMIGMSV 344
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSS 313
M+QYI++VADRLL +LG Y + P+ WME ISL+GKTNFFEK+V EY KA V
Sbjct: 345 KSMTQYIKYVADRLLVSLGNPGFYSESCPYSWMENISLEGKTNFFEKKVAEYAKAGVARR 404
Query: 314 LNGNG-----GNHVFKMDEDF 329
N +G H F ++EDF
Sbjct: 405 DNDDGDGTQKNTHAFSLEEDF 425
>gi|367007082|ref|XP_003688271.1| hypothetical protein TPHA_0N00560 [Tetrapisispora phaffii CBS 4417]
gi|357526579|emb|CCE65837.1| hypothetical protein TPHA_0N00560 [Tetrapisispora phaffii CBS 4417]
Length = 398
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EPLL + R + PI+YP+I+E YK+AEASFWTAEE+DLS+D+ W E + ++E+ FI+
Sbjct: 73 EPLLNKDKKRHLVHPIKYPDIYETYKRAEASFWTAEEIDLSKDLYDWNERMNSNERFFIS 132
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F E+QV EAR FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 133 RVLAFFAASDGIVNENLTENFSVEIQVPEARYFYGFQIMIENIHSETYSLLIDTYIKDPK 192
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E S LF A + +P + +KA+WAL WI+ E F ERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 193 ESSFLFNAIDYIPQIKEKAEWALRWINDDEALFGERLVAFASIEGVFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFAC+L++ L+NK V+ IV EAV IE+ + DAL
Sbjct: 253 RGLMPGLTFSNELICRDEGLHTDFACILFAHLKNKPDPAIVEKIVTEAVGIEKRYFLDAL 312
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 313 PVALLGMNAKLMTQYVEFVADRLLVAFGNEKYYKVENPFDFMENISLAGKTNFFEKRVSD 372
Query: 305 YQKASVMS-SLNGNGGNHVFKMDEDF 329
YQKA V+S S N F M+E+F
Sbjct: 373 YQKAGVISKSSNTEADEGAFAMNENF 398
>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 247/326 (75%), Gaps = 3/326 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFIT 65
EPLL + +R M PI+YP+I+E YKKAEASFWTAEE+DLS+D+ W + L ++E+ FI+
Sbjct: 69 EPLLNEDKNRLIMHPIRYPDIYEAYKKAEASFWTAEEIDLSKDLSDWNDKLNSNERFFIS 128
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EV+V EAR FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 129 RVLAFFAASDGIVNENLTENFSVEVKVPEARCFYGFQIMIENIHSETYSLLIDTYIKDPK 188
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A + +P + +KA+WAL WI+ E F ERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 189 ESDFLFNAIDYIPQIKEKAEWALRWINNDEALFGERLVAFASIEGVFFSGSFASIFWLKK 248
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFA LL+S L NK V+ IV EAVEIE+ + DAL
Sbjct: 249 RGLMPGLTFSNELICRDEGLHTDFASLLFSHLDNKPDPAIVEKIVTEAVEIEKRYFIDAL 308
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM+QY+EFVADRLL + G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 309 PVALLGMNAKLMNQYVEFVADRLLVSFGNEKYYKVENPFDFMENISLAGKTNFFEKRVSD 368
Query: 305 YQKASVMSSLNGNG-GNHVFKMDEDF 329
YQKASV++ + N + F ++E+F
Sbjct: 369 YQKASVIAKSSENKVDDETFAVNEEF 394
>gi|363582863|ref|ZP_09315673.1| ribonucleoside-diphosphate reductase small chain [Flavobacteriaceae
bacterium HQM9]
Length = 326
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 249/329 (75%), Gaps = 6/329 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEK 61
S EP+L NP+RF +FPIQ+ ++W+ YKK EA FWTAEE+DL QD+ W++ L+ DE+
Sbjct: 2 STSVEPILKENPNRFVIFPIQHHDLWDWYKKMEACFWTAEEIDLHQDMTDWQTKLSDDER 61
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI H+LAFFAASDGIV N+ F+ EVQ EA Y FQ+ IENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNHNIGENFVNEVQYPEAMFVYTFQMMIENIHSETYSLLIDTYV 121
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
K+ EK +LFRA E P + KKADWALNW S++FAERLIAFA VEG+FFSG+FC+IFW
Sbjct: 122 KDEVEKDKLFRALEEFPAIKKKADWALNWA-TSDSFAERLIAFAAVEGVFFSGAFCSIFW 180
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFV 240
LKKRGLMPGLTFSNELISRDEG+H +FA L++ L NK+ E+R+K I+ A+E+E+ F+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHTEFAVHLHNNHLINKVPEKRIKEIILGALEVEKIFI 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
++LP +L+GMN LM+QY+EFV DRLL LGC K + NPFD+M++ISLQGKTNFFEK
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLSELGCSKEFNTANPFDFMDMISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RV EYQKA VM N + D DF
Sbjct: 301 RVSEYQKAGVM---NKDKDAEKISFDADF 326
>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. neoformans JEC21]
gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 430
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/336 (59%), Positives = 246/336 (73%), Gaps = 8/336 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EE +L + RF +FPI+Y EIW+ YK A+ASFWTAEE+D D+ W + +T E
Sbjct: 95 PEEEEEDILRESESRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQE 154
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI +LAFFAASDGIV EN+ ++F EVQ++EARAFY FQ IE +HSE YSLL+ETY
Sbjct: 155 RFFILRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETY 214
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
++++ EK LFR +PC+ +KADWAL +I F RL+AFACVEGIFFSGSF AIF
Sbjct: 215 VRDAQEKDFLFRGMTNIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIF 274
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEG+H DFACLLY+ L+++ S + V IV EA+ IE++F+
Sbjct: 275 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHHIVSEALVIEKQFL 334
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALPCAL+G+N LM QY+EFVADRL+ LG K+Y TNPFDWMELISLQGK NFFE
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFES 394
Query: 301 RVGEYQKASVMSSLNGNG-------GNHVFKMDEDF 329
RV YQKA+V + +G VF+ D DF
Sbjct: 395 RVSAYQKANVSRTGTPSGQKEDERLTRRVFRTDADF 430
>gi|405119255|gb|AFR94028.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. grubii H99]
Length = 430
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/336 (59%), Positives = 246/336 (73%), Gaps = 8/336 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EE +L + RF +FPI+Y EIW+ YK A+ASFWTAEE+D D+ W + +T E
Sbjct: 95 PEEEEEDILRESDSRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQE 154
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI +LAFFAASDGIV EN+ ++F EVQ++EARAFY FQ IE +HSE YSLL+ETY
Sbjct: 155 RFFILRILAFFAASDGIVGENIVSQFSLEVQIAEARAFYSFQSMIEQVHSETYSLLIETY 214
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
++++ EK LFR +PC+ +KADWAL +I F RL+AFACVEGIFFSGSF AIF
Sbjct: 215 VRDAQEKDFLFRGMANIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIF 274
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEG+H DFACLLY+ L+++ S + V IV EA+ IE++F+
Sbjct: 275 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHRIVSEALAIEKQFL 334
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALPCAL+G+N LM QY+EFVADRL+ LG K+Y TNPFDWMELISLQGK NFFE
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFES 394
Query: 301 RVGEYQKASVMSSLNGNG-------GNHVFKMDEDF 329
RV YQKA+V + +G VF+ D DF
Sbjct: 395 RVSAYQKANVSRTGTPSGQKEDERLTRRVFRTDADF 430
>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain [Theileria annulata]
gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain, putative [Theileria annulata]
Length = 322
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/303 (62%), Positives = 232/303 (76%), Gaps = 14/303 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE +L NP+R C+FPI YP+ WE YKKA+ASFWTAEE+D S D W L DE+HFIT
Sbjct: 16 EEFILNRNPNRTCLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDYNHWHKLNKDERHFIT 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA +F+++V++ EA++FY FQIA+ENIHSE YSLL+E Y+K+
Sbjct: 76 NVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVKDEA 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAE--------------RLIAFACVEGIF 171
EK RLF A ET+ V KA+WA WI +FAE R++A+A VEGI
Sbjct: 136 EKRRLFMAIETIDAVKDKANWAKKWITDENSFAERIVSNFKNKLINYYRIVAYAAVEGIL 195
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSFCA+FWLKKRGLMPGLTFSNELI+RDEGLH DF C +Y L++KL EE V+ I+KE
Sbjct: 196 FSGSFCALFWLKKRGLMPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPEEAVQQIIKE 255
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AV +ER ++CD+LPC L+GMN LM+QYIEFVADRLL +LG VY VTNPFDWM+LIS+
Sbjct: 256 AVVVERSYICDSLPCDLIGMNSQLMTQYIEFVADRLLQSLGVRPVYNVTNPFDWMQLISV 315
Query: 292 QGK 294
Q K
Sbjct: 316 QVK 318
>gi|389741966|gb|EIM83154.1| ribonucleotide reductase subunit R2 [Stereum hirsutum FP-91666 SS1]
Length = 341
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 247/328 (75%), Gaps = 13/328 (3%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEK 61
SI +E +LTPNP RF +FPI YP++W+MY++A ASFWT E+++ DIRQW E+LTA+E+
Sbjct: 7 SITQEIVLTPNPGRFVLFPIVYPDLWDMYQRALASFWTTSEINMVHDIRQWTEALTANER 66
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV+ENL +RF EVQ++EARAFY Q +E IHSE Y++L++ I
Sbjct: 67 HFISHVLAFFAASDGIVVENLVSRFASEVQLAEARAFYASQAMMETIHSETYAMLIDVLI 126
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ RLF A E++PCV +KA WA+ WI D +F RLIAFA VEG+FFSGSF +IF
Sbjct: 127 KDMGERERLFNAMESIPCVKEKATWAVKWIADAEASFPIRLIAFAVVEGVFFSGSFASIF 186
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFAC+L+ ++NK V I +EAV IE+ FV
Sbjct: 187 WLKKRGLMPGLTFSNELISRDEGLHTDFACMLFGYIQNKPLPAVVVQIFREAVLIEQRFV 246
Query: 241 C-----------DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELI 289
DALP L+GMN M +YIEF+ADRLL ALG K+Y V NPFD+M++I
Sbjct: 247 TGADGFILVFLLDALPVKLIGMNAENMCKYIEFIADRLLQALGYDKIYSVGNPFDFMDII 306
Query: 290 SLQGKTNFFEKRVGEYQKASVMSSLNGN 317
SL+GKTNFFEKRV +Y K SV S+ +
Sbjct: 307 SLEGKTNFFEKRVSDYAKFSVASNATSD 334
>gi|440491857|gb|ELQ74463.1| Ribonucleotide reductase, beta subunit [Trachipleistophora hominis]
Length = 325
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/330 (61%), Positives = 243/330 (73%), Gaps = 6/330 (1%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M PEE LLT +++ +FP+ ++W+MYK+A +SFWT EEVDLS+DI W L DE
Sbjct: 1 MSHPPEEALLTEPTNKYTLFPLTNQDVWQMYKQALSSFWTVEEVDLSKDIDDWNRLNCDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI++VLAFFAASDGIV ENL F +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TY
Sbjct: 61 RHFISYVLAFFAASDGIVNENLLENFSREVQLKEARCFYGFQIMIENVHSEMYSLLIDTY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +EK LF A + V +KA+W WI D FA R+IAFACVEG+FFSGSF +I
Sbjct: 121 IKDQEEKDFLFNAIANINTVKRKAEWCFKWINDKDSDFATRVIAFACVEGLFFSGSFASI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH FA L+ + L N+ +E++ IVK+AVEIE EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHYQFAVLMNNTLVNRCPKEKILEIVKDAVEIEEEF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
V D+LP +L+GMN LM QYIEFVAD +L LG G+ Y V NPFD+ME ISL GKTNFFE
Sbjct: 241 VSDSLPVSLIGMNCKLMCQYIEFVADGILVDLGVGRRYNVQNPFDFMENISLFGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
KRV EYQK V G FK DEDF
Sbjct: 301 KRVAEYQKGYV-----GIENEQTFKTDEDF 325
>gi|401826656|ref|XP_003887421.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
gi|395459939|gb|AFM98440.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
Length = 324
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 246/325 (75%), Gaps = 8/325 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL P +RF +FPI+Y +IW++YKKAE+SFWT EEV L +DI W L A EKHFI+H
Sbjct: 6 EPLLNPEEERFVLFPIKYIDIWKLYKKAESSFWTVEEVTLDKDIEDWGKLNAGEKHFISH 65
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV NL RF EV++ EA+ FYGFQ+AIENIHSEMYSLL++TYIK++ E
Sbjct: 66 VLAFFAASDGIVNLNLLERFSNEVKILEAKFFYGFQMAIENIHSEMYSLLIDTYIKDAAE 125
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A + +P V KADWA+ WI D +FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 126 KDFLFNAIKNIPSVGDKADWAIRWIEDKDSSFATRLVAFACVEGIFFSGAFASIFWLKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHC+FAC L+ LRNK + R K IV +AV IE++F+ ++L
Sbjct: 186 GLMPGLTFSNELISRDEGLHCEFACHLHRYHLRNKCT--RTKEIVMDAVRIEKDFLSNSL 243
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM +YIEFVAD LL LG K+Y NPFD+ME ISL GKTNFF+KR +
Sbjct: 244 PVKLIGMNCDLMCKYIEFVADTLLENLGEEKIYHTANPFDFMENISLVGKTNFFDKRESQ 303
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V GN F++D DF
Sbjct: 304 YQKAFV----GIENGNDSFRIDVDF 324
>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
strain Muguga]
gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
[Theileria parva]
Length = 308
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 230/297 (77%), Gaps = 10/297 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EE LL NP+R +FPI YPE WE YKKA+ASFWTAEE+D S D W L DE+HFIT
Sbjct: 7 EEFLLNRNPNRTSLFPIVYPEFWEWYKKAQASFWTAEEIDFSMDYNHWHRLNKDERHFIT 66
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENLA +F+++V++ EA++FY FQIA+ENIHSE YSLL+E Y+K+
Sbjct: 67 NVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVKDEA 126
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ET+ V KA+WA WI +FAER++A+A VEGI FSGSFCA+FWLKKR
Sbjct: 127 EKRRLFMAIETIDAVKDKANWAKKWITDENSFAERIVAYAAVEGILFSGSFCALFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELI+RDEGLH DF C +Y L++KL EE V+ I+KEAV +ER ++CD+LP
Sbjct: 187 GLMPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPEEAVQQIIKEAVVVERSYICDSLP 246
Query: 246 CALVGMNG----------ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ 292
C L+GMN LM+QYIEFVADRLL ALG VY VTNPFDWM+LIS+Q
Sbjct: 247 CDLIGMNSRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVTNPFDWMQLISVQ 303
>gi|378706263|gb|AFC35064.1| hypothetical protein OtV6_156c [Ostreococcus tauri virus RT-2011]
Length = 388
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/310 (61%), Positives = 236/310 (76%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P +RF +FP++YPE+WE+YKKA+ S WTAEEVDLS+D+ W++L +E+ FI +
Sbjct: 74 EPILAPTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNDNEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+S E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDSTE 193
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF A +TVPC+ KKA WA+ W D S FAERL AFACVEGIFFSGSFCAI+WLKKRG
Sbjct: 194 KKQLFEAIQTVPCIEKKAQWAMKWFDKSRPFAERLFAFACVEGIFFSGSFCAIYWLKKRG 253
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGL FSNELISRDEGLH +FA L+ L+RNK E + IVKEAVEIE+ F+ DALPC
Sbjct: 254 LMPGLCFSNELISRDEGLHQEFAVELFKLMRNKPKTETIHSIVKEAVEIEKGFILDALPC 313
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
AL+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 ALIGMNSEKMSEYIEYVSDRLLKQIGQPPIWNSKNPFDFMENISLDGKTNFFEKRVGDYG 373
Query: 307 KASVMSSLNG 316
K S G
Sbjct: 374 KMDDTSDEIG 383
>gi|356980108|gb|AET43587.1| ribonucleotide reductase [Micromonas pusilla virus PL1]
Length = 389
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 236/308 (76%), Gaps = 1/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L DRF +FP++YPE+WE+YKKA+ S WTAEEVDLS D+ W++L +EK FI +
Sbjct: 74 EPILASTLDRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSSDMEDWKNLNDNEKKFIKY 133
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+S E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDSTE 193
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A +TVPC+ KKA+WAL W D S TFAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKHLFEAIQTVPCIQKKANWALKWFDTKSRTFAERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLRNK S E + IV+EAVEIE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTEVIHSIVREAVEIEKGFILDALP 313
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++G NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQIGQPTLWGSKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QKASVMSS 313
K +S
Sbjct: 374 GKMDDISD 381
>gi|346644878|ref|NP_001231111.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Bos
taurus]
gi|296482362|tpg|DAA24477.1| TPA: ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
Length = 341
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/290 (68%), Positives = 236/290 (81%), Gaps = 5/290 (1%)
Query: 41 AEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYG 100
+E VDLS+DI+ WE+L ++E++FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYG
Sbjct: 56 SEPVDLSKDIQHWEALKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYG 115
Query: 101 FQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAE 159
FQIA+ENIHSEMYSLL++TYIK+S E+ LF A ET+PCV KKADWAL WI D + T+ E
Sbjct: 116 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGE 175
Query: 160 RLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNK 219
R++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K
Sbjct: 176 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHK 235
Query: 220 LSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
SE+RVK I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG KV+ V
Sbjct: 236 PSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 295
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 296 ENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 341
>gi|386783387|pdb|4DJN|A Chain A, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
gi|386783388|pdb|4DJN|B Chain B, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
Length = 311
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/292 (67%), Positives = 231/292 (79%), Gaps = 1/292 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+ YK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 20 EEPLLRKSSRRFVIFPIQYPDIWKXYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 79
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSE YSLL++TYI++
Sbjct: 80 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEXYSLLIDTYIRDPK 139
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 140 KREFLFNAIETXPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 199
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGL PGLTFSNELISRDEGLHCDFACL + L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 200 RGLXPGLTFSNELISRDEGLHCDFACLXFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 259
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTN 296
P L+G N L QYIEFVADRLL LG KV+ NPFD+ E ISL+GKTN
Sbjct: 260 PVGLIGXNCILXKQYIEFVADRLLVELGFSKVFQAENPFDFXENISLEGKTN 311
>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
Length = 338
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/290 (68%), Positives = 236/290 (81%), Gaps = 5/290 (1%)
Query: 41 AEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYG 100
+E VDLS+DI+ WE+L ++E++FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYG
Sbjct: 53 SEPVDLSKDIQHWEALKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYG 112
Query: 101 FQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAE 159
FQIA+ENIHSEMYSLL++TYIK+S E+ LF A ET+PCV KKADWAL WI D + T+ E
Sbjct: 113 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGE 172
Query: 160 RLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNK 219
R++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K
Sbjct: 173 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHK 232
Query: 220 LSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
SE+RVK I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG KV+ V
Sbjct: 233 PSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 292
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 293 ENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 338
>gi|402495788|ref|ZP_10842508.1| ribonucleoside-diphosphate reductase small chain [Aquimarina
agarilytica ZC1]
Length = 326
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 247/325 (76%), Gaps = 6/325 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L NP+RF +FPI++ ++WE YKK EA FWTAEE+DL QD+ W++ L+ DE++FI
Sbjct: 6 EPILKENPNRFVIFPIEHHDLWEWYKKMEACFWTAEEIDLHQDLSDWKTKLSEDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV N+ F+ EVQ EA Y FQ+ IENIHSE YSLL++TY+K+
Sbjct: 66 HILAFFAASDGIVNHNIGENFVNEVQYPEAMFVYTFQMMIENIHSETYSLLIDTYVKDEV 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LFRA E P + KKADWALNW S++FAERLIAFA VEG+FFSG+FC+IFWLKKR
Sbjct: 126 EKDKLFRALEEFPAIKKKADWALNWA-ASDSFAERLIAFAAVEGVFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+H +FA L++ L NK+ E+R+K I+ A+E+E+ F+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHTEFAVHLHNKHLVNKVPEKRIKEIILGALEVEKIFITESL 244
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LGC K + NPFD+M++I ++GKTNFFEKRV E
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLLSELGCSKEFNTANPFDFMDMIGMEGKTNFFEKRVSE 304
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V LN + D DF
Sbjct: 305 YQKAGV---LNKDKDAEKISFDADF 326
>gi|401881690|gb|EJT45980.1| ribonucleotide reductase small subunit [Trichosporon asahii var.
asahii CBS 2479]
gi|406697724|gb|EKD00978.1| ribonucleotide reductase small subunit [Trichosporon asahii var.
asahii CBS 8904]
Length = 455
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/338 (59%), Positives = 248/338 (73%), Gaps = 14/338 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADE 60
P EE +L DRF +FPI+Y +IW YK+A+ASFWTAEE+DL++D+ W E + E
Sbjct: 122 PEEEEEDILRETSDRFVLFPIKYRDIWLAYKQAQASFWTAEELDLAKDLYDWNERMNERE 181
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FI +LAFFA+SDGIV ENL ++F EVQ++EARAFY FQ IE +H+E YSLL+ETY
Sbjct: 182 RFFILRILAFFASSDGIVGENLISQFATEVQIAEARAFYAFQTMIEQVHAETYSLLIETY 241
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
+++ DEK LF+ E +PC+ KKADWA+ +I F RLIAFACVEGIFFSGSF AIF
Sbjct: 242 VQDKDEKDFLFKGMENIPCIQKKADWAMKYITDDVPFRIRLIAFACVEGIFFSGSFAAIF 301
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLM GLTFSNELISRDEGLH DFACLLYS L++K S+E V IVKE+++IE+EF+
Sbjct: 302 WLKKRGLMGGLTFSNELISRDEGLHTDFACLLYSHLKHKCSQEEVHKIVKESLDIEKEFL 361
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALPCAL+G+N Y+EFVADRL+ ALG K+Y TNPFDWMELISLQGK NFFE
Sbjct: 362 TDALPCALIGINA----DYMEFVADRLVVALGYEKIYHSTNPFDWMELISLQGKANFFES 417
Query: 301 RVGEYQKASVMSSL-------NGNGG--NHVFKMDEDF 329
RV YQ A++ S N + G VF+ D F
Sbjct: 418 RVSSYQIANMSGSTTPLFSRKNSDEGRDKRVFRTDAYF 455
>gi|386783699|gb|AFJ24744.1| ribonucleoside diphosphate reductase subunit M2-2 [Schmidtea
mediterranea]
Length = 321
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/305 (63%), Positives = 236/305 (77%), Gaps = 1/305 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LLT + R IQY +IWEM+ KA +SFWT EV+LS+D W+ + DE++FITH
Sbjct: 2 EILLTEDKSRIGFLNIQYEDIWEMFNKARSSFWTVNEVNLSKDFAHWKKMNDDERYFITH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF++EV++ EA AFY FQIAIENIHSEMYSLL+++Y+ +++
Sbjct: 62 VLAFFAASDGIVNENLVERFIQEVKIPEAEAFYSFQIAIENIHSEMYSLLIDSYVTDTET 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF A ET+PCV KKA WAL WI D TF R++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 122 KNKLFNAIETMPCVQKKAQWALRWISDKKSTFGTRVVAFAAVEGIFFSGSFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLHCDFACL++ L +K S E+V ++KEAV IE+EF+ DALP
Sbjct: 182 GLMPGLCFSNELISRDEGLHCDFACLMFKYLSSKPSPEQVLDLIKEAVGIEKEFLTDALP 241
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN M +YIEFVADRLL LGC K + NP D+M+ I + GKTNFFEKRVGEY
Sbjct: 242 VSLIGMNAESMCEYIEFVADRLLVELGCDKFWNTENPLDFMDNICIDGKTNFFEKRVGEY 301
Query: 306 QKASV 310
+SV
Sbjct: 302 SMSSV 306
>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
Length = 394
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/326 (61%), Positives = 247/326 (75%), Gaps = 5/326 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLLT + R ++PI+YPE+W+ YKK+ ASFWTAEE+DLS+D+ W + + +E+ FI+
Sbjct: 71 EPLLTKDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLADWNNKMNENERFFIS 130
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EVQ+ EA++ Y FQI +ENIHSE YSLL+ETY K+ +
Sbjct: 131 RVLAFFAASDGIVNENLVENFCAEVQIPEAQSVYKFQIMMENIHSETYSLLIETYFKDPE 190
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A E +P + +KADWA+ WI D +AERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EADFLFNAIENIPFIREKADWAIRWIQDEDALYAERLVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L+NK S E ++ I+ EAV IE+++ DAL
Sbjct: 251 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSPEIIEKIITEAVTIEKKYFSDAL 310
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QY+EFVADRLL A G K Y VTNPFD+ME ISL GKTNFFEKRV +
Sbjct: 311 PVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSD 370
Query: 305 YQKASVMSSLNG-NGGNHVFKMDEDF 329
YQKA VM ++ N +F D+DF
Sbjct: 371 YQKAGVMEKVDKQNEETGLF--DQDF 394
>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
Length = 393
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/318 (61%), Positives = 236/318 (74%), Gaps = 5/318 (1%)
Query: 13 NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFA 72
+ RF +FPI+ +W MYK+AEASFWTAEEVDL QD + WE L E++F++ VLAFFA
Sbjct: 78 DSSRFTLFPIKDAGLWAMYKRAEASFWTAEEVDLGQDKQHWEQLDEGERYFLSRVLAFFA 137
Query: 73 ASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
ASDGIVLENL RF +EV + EAR FY FQ AIE +H EMYSLLLETY+++ E+ L R
Sbjct: 138 ASDGIVLENLVERFAQEVTLPEARFFYAFQGAIEGVHQEMYSLLLETYVEDPGEREALTR 197
Query: 133 AFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLT 192
A + +PCV KADWA+ W +A RL+AFA VEG+FFSGSFCAIFWL+KRG++PGL
Sbjct: 198 AHDLMPCVKAKADWAMKWTASDAPYAARLLAFAAVEGVFFSGSFCAIFWLRKRGILPGLG 257
Query: 193 FSNELISRDEGLHCDFACLLYSLLRN--KLSEERVKGIVKEAVEIEREFVCDALPCALVG 250
F+NELISRDEGLHCDFAC LYS L +LS+ I+ EAV+ E +FV DALP +LVG
Sbjct: 258 FANELISRDEGLHCDFACALYSRLPGHLRLSDAEATAIISEAVDTEVDFVTDALPVSLVG 317
Query: 251 MNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASV 310
MN LM+ Y++FVADRLL +LG K+YG NPFD+MELIS+QGKTNFFEKRV EYQKA+V
Sbjct: 318 MNAKLMTDYVKFVADRLLASLGHPKIYGAANPFDFMELISMQGKTNFFEKRVAEYQKANV 377
Query: 311 MSSLNGNGGNHVFKMDED 328
+ VF D D
Sbjct: 378 AGDAT---ADFVFDADAD 392
>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
Length = 388
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/323 (60%), Positives = 240/323 (74%), Gaps = 8/323 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L +RF +FP++YPE+WE+YKKA+ S WTAEEVDLS+D+ W++L +E+ FI +
Sbjct: 74 EPILASTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNDNEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQSHNEMVHGETYSKLIDKYIKDGAE 193
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF A +TVPC+ +KA+WAL W D S FAERL AFACVEGIFFSGSFCAIFWLKKRG
Sbjct: 194 KKQLFEAIQTVPCIERKANWALKWFDKSRPFAERLFAFACVEGIFFSGSFCAIFWLKKRG 253
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGL FSNELISRDEGLH +FA L+ LLRNK S E + IVKEAVEIE+ F+ DALPC
Sbjct: 254 LMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTETIHSIVKEAVEIEKNFILDALPC 313
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 NLIGMNSEKMSEYIEYVSDRLLKQVGQPPIWNSKNPFDFMENISLDGKTNFFEKRVGDYG 373
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K S+ G DEDF
Sbjct: 374 KLDDDSAEIG--------FDEDF 388
>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
Length = 311
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/282 (64%), Positives = 227/282 (80%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L+ DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 30 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKH 89
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F+++V+++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 90 VLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKE 149
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 150 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 209
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL EE V+ IVKEAVE+ER F+C++LPC
Sbjct: 210 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 269
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+L
Sbjct: 270 DLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDL 311
>gi|396081544|gb|AFN83160.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
romaleae SJ-2008]
Length = 326
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/325 (62%), Positives = 243/325 (74%), Gaps = 8/325 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL P +RF +FPI+Y +IW +YKKAE+SFWT EEV L +D+ W L A EKHFI+H
Sbjct: 8 EPLLNPEEERFVLFPIKYDDIWALYKKAESSFWTVEEVSLDKDVEDWGRLNAKEKHFISH 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV NL RF EV++ EAR FYGFQ+AIE+IHSEMYSLL+ETYI+N++E
Sbjct: 68 VLAFFAASDGIVNLNLVERFSSEVKILEARFFYGFQVAIESIHSEMYSLLIETYIRNAEE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A + +P V KADWA+ WI D FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 RDFLFNAIKNIPSVKDKADWAIKWIEDKDSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHC+FAC L+ L NK + R K +V +AV IE+ F+ ++L
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACHLHRYHLNNKCT--RTKEVVMDAVRIEKRFLSESL 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM +YIEFVAD LL LG K+Y NPFD+ME ISL GKTNFF+KR +
Sbjct: 246 PVNLIGMNCELMCRYIEFVADTLLENLGEEKIYHAINPFDFMENISLVGKTNFFDKRESQ 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V GN F++D DF
Sbjct: 306 YQKAFV----GIENGNDSFRIDVDF 326
>gi|357541912|gb|AET84674.1| ribonucleotide reductase [Ostreococcus lucimarinus virus OlV4]
Length = 364
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/308 (62%), Positives = 236/308 (76%), Gaps = 1/308 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL P +RF +FP++YPE+WE+YKKA+ S WTAEEVDLS+D+ W++L +E+ FI +
Sbjct: 49 EPLLAPTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNENEQKFIKY 108
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 109 ILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIKDGAE 168
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A +TVPC+ KKA+WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 169 KKQLFEAIQTVPCIQKKANWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 228
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLRNK + E + IVKEAVEIE+ F+ DALP
Sbjct: 229 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPTTETIHSIVKEAVEIEKGFILDALP 288
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 289 CALIGMNSEKMSEYIEYVSDRLLKQIGVPPIWNSKNPFDFMENISLDGKTNFFEKRVGDY 348
Query: 306 QKASVMSS 313
K S
Sbjct: 349 GKMDDTSD 356
>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/309 (63%), Positives = 237/309 (76%), Gaps = 2/309 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF A E +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + NK + ++ IV+EAV IE+EF+ ++LP
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 263
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISLQGKTNFFE+R YQ
Sbjct: 264 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISLQGKTNFFERREANYQ 323
Query: 307 KASVMSSLN 315
K V ++N
Sbjct: 324 KGYVELTMN 332
>gi|444318509|ref|XP_004179912.1| hypothetical protein TBLA_0C05960 [Tetrapisispora blattae CBS 6284]
gi|387512953|emb|CCH60393.1| hypothetical protein TBLA_0C05960 [Tetrapisispora blattae CBS 6284]
Length = 393
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/325 (61%), Positives = 241/325 (74%), Gaps = 10/325 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL + R +FPI+YP+I+E YK+AEASFWTAE + L A+E+ FI+
Sbjct: 78 DEPLLNKDKKRKILFPIEYPDIYEAYKRAEASFWTAEGNN---------RLNANERFFIS 128
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EVQV EAR FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 129 RVLAFFAASDGIVNENLNENFSVEVQVPEARLFYGFQIMIENIHSETYSLLIDTYIKDPK 188
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A +T+P + +KA+WA+ WI+ S+ +AERL+AFA +EGIFFSGSF +IFWLKK
Sbjct: 189 ESQFLFDAIQTIPQIKEKAEWAIRWINDSDALYAERLVAFASIEGIFFSGSFASIFWLKK 248
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL++ + NK S + ++ IV EAVEIE+ + DAL
Sbjct: 249 RGLMPGLTFSNELICRDEGLHTDFACLLFTHIENKPSHDIIEKIVTEAVEIEKRYFIDAL 308
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM+QY+EFVADRLL A G KVY V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 309 PVALLGMNADLMNQYVEFVADRLLVAFGNPKVYNVENPFDFMENISLAGKTNFFEKRVSD 368
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKASVM+ + DE F
Sbjct: 369 YQKASVMAVASNKEAGGAMAFDESF 393
>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
Length = 326
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 247/325 (76%), Gaps = 8/325 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL P +RF +FPIQ+ ++W MYKKAE+SFWT EEV L +DI W+ L EKHFI++
Sbjct: 8 EPLLDPKEERFVLFPIQHEDVWRMYKKAESSFWTVEEVLLDKDIEDWKKLNPKEKHFISN 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV NL RF EV++ EA+ FYGFQIAIENIHSEMYSLL++TY+++ ++
Sbjct: 68 VLAFFAASDGIVNLNLVERFSSEVKMLEAKLFYGFQIAIENIHSEMYSLLIDTYVRDGEQ 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A +T+P V KADWA+ WI D + FA RL+AFACVEGIFFSGSF +IFWLKKR
Sbjct: 128 KKFLFNAVKTIPSVKDKADWAIKWIEDKNSDFATRLVAFACVEGIFFSGSFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K +RVK +V +AVE+E+ F+ ++L
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHRRYLKQKC--KRVKEVVMDAVEVEKRFLSESL 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM +YIEFVAD LL L K+Y NPFD+ME ISL GKTNFF+KR +
Sbjct: 246 PVDLIGMNCQLMCKYIEFVADTLLENLEEEKIYHTPNPFDFMENISLVGKTNFFDKRESQ 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA V + GN F++D DF
Sbjct: 306 YQKAFV----GIDNGNDSFRIDVDF 326
>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
Length = 408
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 239/324 (73%), Gaps = 9/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL P +RF +FP++YP +WE+YKKA+ S WTAEEVDLS+D+ W++L +EK FI +
Sbjct: 93 EPLLAPTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 152
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 153 ILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIKDGAE 212
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A +TVPC+ KKADWA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 213 KKQLFEAIQTVPCIQKKADWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 272
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLR K + E + IVKEAVEIE+ F+ DALP
Sbjct: 273 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRIKPTTETIHSIVKEAVEIEKGFILDALP 332
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 333 CALIGMNSEKMSEYIEYVSDRLLKQIGVPPIWNSKNPFDFMENISLDGKTNFFEKRVGDY 392
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
K S G DEDF
Sbjct: 393 GKMDDTSDEIG--------FDEDF 408
>gi|338728582|ref|XP_003365702.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Equus caballus]
Length = 299
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/299 (66%), Positives = 235/299 (78%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQ 91
++ EA+ +EVDLS+D+ W LT+DEK+FI+HVLAFFAASDGIV ENL RF +EVQ
Sbjct: 5 ERPEAARPEQDEVDLSKDLPHWNKLTSDEKYFISHVLAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALQWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGA 270
L++ L NK SEERV+ I+ AVEIE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMNCVLMKQYIEFVADRLLVE 244
Query: 271 LGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
LG KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ +HVF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETT----DHVFTLDADF 299
>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 330
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/304 (64%), Positives = 235/304 (77%), Gaps = 2/304 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE+YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEVYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF A E +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + NK + ++ IV+EAV IE+EF+ ++LP
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 263
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISLQGKTNFFE+R YQ
Sbjct: 264 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISLQGKTNFFERREANYQ 323
Query: 307 KASV 310
K V
Sbjct: 324 KGYV 327
>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
cerevisiae]
Length = 399
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 243/330 (73%), Gaps = 11/330 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAE---EVDLSQDIRQWES-LTADEK 61
EEPLL + +R +FPI+Y EIW+ Y EASFWTAE E+DLS+DI W + + +E+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAY---EASFWTAETAEEIDLSKDIHDWNNRMNENER 131
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
FI+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYI
Sbjct: 132 FFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYI 191
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IF
Sbjct: 192 KDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIF 251
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ +
Sbjct: 252 WLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYF 311
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEK
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEK 371
Query: 301 RVGEYQKASVMS-SLNGNGGNHVFKMDEDF 329
RV +YQKA VMS S G F +EDF
Sbjct: 372 RVSDYQKAGVMSKSTKQEAG--AFTFNEDF 399
>gi|357542115|gb|AET84875.1| ribonucleotide reductase [Micromonas pusilla virus SP1]
Length = 389
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/307 (61%), Positives = 236/307 (76%), Gaps = 1/307 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L+P +RF +FP++YP +WE+YKKA+ S WTAEEVDLS D+ W++L +E+ FI +
Sbjct: 74 EPILSPTLNRFTVFPLKYPGLWELYKKAQMSNWTAEEVDLSTDLSDWKTLNDNEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+S E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDSTE 193
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A +TVPC+ +KA+WAL W D S TF+ERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKHLFEAIQTVPCIERKANWALKWFDTKSRTFSERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLRNK S + + IV+EAVEIE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTDVIHSIVREAVEIEKGFILDALP 313
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++G NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSDKMSEYIEYVSDRLLKQVGQPPIWGSKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QKASVMS 312
K S
Sbjct: 374 GKMDDTS 380
>gi|388548908|gb|AFK66109.1| ribonucleotide reductase R2 [Ostreococcus lucimarinus virus OlV3]
Length = 358
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 243/324 (75%), Gaps = 9/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P +RF +FP++YP++WE+YKKA+ S WTAEEVDLS+D+ W++L +EK FI +
Sbjct: 43 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 102
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 103 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 162
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A +TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 163 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 222
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LRN+ + E + IVKEAVEIE+ F+ DALP
Sbjct: 223 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 282
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 283 CNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWNAKNPFDFMENISLDGKTNFFEKRVGDY 342
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
K L+ + G+ F DE+F
Sbjct: 343 GK------LDDDAGDIGF--DEEF 358
>gi|444727943|gb|ELW68416.1| Ribonucleoside-diphosphate reductase subunit M2 B [Tupaia
chinensis]
Length = 365
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 244/363 (67%), Gaps = 59/363 (16%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L DEK+FI+
Sbjct: 23 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 82
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 83 HILAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF GSF AIFWLKK
Sbjct: 143 KREFLFNAIETMPYVKKKADWALRWIADRKSTF----------------GSFAAIFWLKK 186
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIE-------- 236
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE
Sbjct: 187 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 246
Query: 237 ------------------------------REFVCDALPCALVGMNGALMSQYIEFVADR 266
+EF+ +ALP L+GMN LM QYIEFVADR
Sbjct: 247 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKEFLTEALPVGLIGMNCVLMKQYIEFVADR 306
Query: 267 LLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMD 326
LL LG K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D
Sbjct: 307 LLVELGFSKIFHAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLD 362
Query: 327 EDF 329
DF
Sbjct: 363 ADF 365
>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
Length = 408
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 243/324 (75%), Gaps = 9/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P +RF +FP++YP++WE+YKKA+ S WTAEEVDLS+D+ W++L +EK FI +
Sbjct: 93 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 152
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 153 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 212
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A +TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 213 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 272
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LRN+ + E + IVKEAVEIE+ F+ DALP
Sbjct: 273 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 332
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 333 CNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWNAKNPFDFMENISLDGKTNFFEKRVGDY 392
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
K L+ + G+ F DE+F
Sbjct: 393 GK------LDDDAGDIGF--DEEF 408
>gi|388548650|gb|AFK65852.1| ribonucleotide reductase R2 [Ostreococcus lucimarinus virus OlV6]
Length = 389
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/302 (61%), Positives = 233/302 (77%), Gaps = 1/302 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P +RF +FP++YP++WE+YKKA+ S WTAEEVDLS+D+ W++L +EK FI +
Sbjct: 74 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 133
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 193
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A +TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LRN+ + E + IVKEAVEIE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 313
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWNAKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QK 307
K
Sbjct: 374 GK 375
>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
Length = 304
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 222/271 (81%), Gaps = 1/271 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL N RF +FPI++P+IW MYKKAEASFWT EEVDLS+D+ WE L E+HFI+H
Sbjct: 32 EPLLKENIKRFVIFPIEFPDIWHMYKKAEASFWTVEEVDLSKDLEHWERLKPSERHFISH 91
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQVSEAR FYGFQIA+EN+HSEMYSLL++TYIKN E
Sbjct: 92 VLAFFAASDGIVNENLVERFSQEVQVSEARCFYGFQIAMENVHSEMYSLLIDTYIKNPTE 151
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A ET+PCV KKADWAL WI + TFAER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 152 KHFLFNAIETMPCVKKKADWALKWISHKTATFAERVVAFAAVEGIFFSGSFAAIFWLKKR 211
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ + K +E+ + I+K+AV IE+EF+ +ALP
Sbjct: 212 GLMPGLTFSNELISRDEGLHCDFACLMFKYVVQKPTEDEICDIIKDAVAIEQEFLTEALP 271
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKV 276
L+GMN +LM +YIEFVADRLL LGC KV
Sbjct: 272 VNLIGMNCSLMKKYIEFVADRLLVELGCKKV 302
>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
Length = 387
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/325 (60%), Positives = 238/325 (73%), Gaps = 3/325 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL +P R +FPI+YPEIW YKK+ ASFWTAEE+DLS+D WE+ + DE+ FI+
Sbjct: 64 EPLLREDPSRRTVFPIKYPEIWTFYKKSVASFWTAEEIDLSKDFDDWENKMNKDERFFIS 123
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL F EV++ EA++ Y FQI +ENIHSE YSLL+ETY K+
Sbjct: 124 RVLAFFAASDGIVNENLVENFCTEVKLPEAKSVYKFQIMMENIHSETYSLLIETYFKDPK 183
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF A + + + +KADWA+ WI E FAERL+AFA +EGIFFSGSF +IFWLKK
Sbjct: 184 EADFLFNAIDNIKYIGEKADWAIRWIQDEEALFAERLVAFAAIEGIFFSGSFASIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L NK ++ I+ EAV IE+++ DAL
Sbjct: 244 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLENKPDPSIIEKIITEAVSIEKKYFSDAL 303
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM QY+E+ ADRLL A G K Y VTNPFD+ME ISL GKTNFFEKRV +
Sbjct: 304 PVSLLGMNCDLMCQYVEYCADRLLVAFGNDKYYNVTNPFDFMENISLAGKTNFFEKRVSD 363
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+A VM N G + DEDF
Sbjct: 364 YQRAGVMEKAE-NKGTGMVSFDEDF 387
>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 337
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/308 (62%), Positives = 233/308 (75%), Gaps = 1/308 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPI+Y +IW YK A ASFWTA+E+DLS+D WE LT E+ FI+
Sbjct: 17 DEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEKLTDGERFFIS 76
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VL+FFAASDGIV ENL RF EVQV EAR FYGFQI +E +HSEMYS ++E YIK+
Sbjct: 77 RVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIKDPK 136
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ F A C+ KKADWAL WID + F RLIAFA VEGI FSGSF AIFWLKK
Sbjct: 137 EQMVHFDAIHQFECIKKKADWALRWIDDRNSPFPVRLIAFAAVEGIMFSGSFAAIFWLKK 196
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RG+M GLT SNELISRDEGLH DFACLLY +++K S+E+V I+KEAV +E+E++ +AL
Sbjct: 197 RGVMKGLTHSNELISRDEGLHRDFACLLYKYIKHKPSQEQVYEIIKEAVSLEQEYLTEAL 256
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMSQYIE+VAD LL LG KVY +NPFD+ME +S++ KTNFFE+RV E
Sbjct: 257 PVDLIGMNCRLMSQYIEYVADHLLTELGYPKVYNASNPFDFMENLSIEAKTNFFERRVSE 316
Query: 305 YQKASVMS 312
YQ+A V+S
Sbjct: 317 YQRAGVLS 324
>gi|341884021|gb|EGT39956.1| CBN-RNR-2 protein [Caenorhabditis brenneri]
Length = 761
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/315 (61%), Positives = 240/315 (76%), Gaps = 1/315 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
I ++PLL + +RF ++PI++ +IW YK A ASFWT EE+DL +D+ W L+ADEK F
Sbjct: 439 IIDKPLLVDSDNRFVIYPIKHRDIWNYYKMAVASFWTTEEIDLGKDMDDWNKLSADEKTF 498
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I+ VLAFFAASDGIV+ENL RF EV+++EAR FYGFQIA+ENIHSE Y+ L+ETYIK+
Sbjct: 499 ISTVLAFFAASDGIVVENLCERFSTEVKLTEARFFYGFQIAVENIHSETYAKLIETYIKD 558
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LF A + KKADWAL WI +ET FAERL+AFA VEGIFFSGSF +IFWL
Sbjct: 559 ESERRVLFDAINGFEFIKKKADWALRWISDTETNFAERLVAFAAVEGIFFSGSFASIFWL 618
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLT SNELI+RDEGLH DFACLL+S + NK S++RV I+ EAV IE +F+ +
Sbjct: 619 KKRGLMPGLTHSNELIARDEGLHRDFACLLFSKIVNKPSQKRVFDIIDEAVSIELDFLTE 678
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM +YI +VAD LL LG K+Y TNPFD+ME IS++GK NFFEKRV
Sbjct: 679 ALPVNVIGMNRYLMKKYIRYVADHLLVELGFSKLYDETNPFDFMENISMEGKANFFEKRV 738
Query: 303 GEYQKASVMSSLNGN 317
EYQ+ +MS + N
Sbjct: 739 SEYQRPGIMSDPSDN 753
>gi|131840053|ref|YP_001096062.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706628|gb|ABG42854.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 3]
gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
Length = 335
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/302 (63%), Positives = 241/302 (79%), Gaps = 2/302 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL P+ RF + I++ +IW MYKKA+ S WTAEE+DL++D WESL+ +EK F+ +
Sbjct: 14 EPLLAPSNSRFTLDVIEHQDIWSMYKKAQFSNWTAEEIDLAKDTAGWESLSENEKFFLKN 73
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RFMKEVQ EAR FYGFQIAIEN+HSE+Y+ LL TYI + E
Sbjct: 74 ILAFFAASDGIVNENLATRFMKEVQYFEARCFYGFQIAIENVHSEVYAKLLNTYILDPVE 133
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+A ET+PC+ KKADWALNWI+ + TF ERL+AF VEGIFFSG+F +IFWLK++
Sbjct: 134 RNGLFKAMETMPCIKKKADWALNWIESPDATFGERLVAFTAVEGIFFSGAFASIFWLKQK 193
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
MPGLTFSNELISRDEGLH DFACLL+ S LR+K S+ERV+ I+ EAVEIE+EF+ +L
Sbjct: 194 VSMPGLTFSNELISRDEGLHRDFACLLFSSHLRHKPSKERVRAIITEAVEIEKEFLTQSL 253
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +LVGMN LM +YI++VAD LL +G ++Y PFD+ME ISL+GKTNFFEKRV +
Sbjct: 254 PVSLVGMNHDLMCKYIQYVADHLLCQMGLSRLYNTPCPFDFMENISLEGKTNFFEKRVAD 313
Query: 305 YQ 306
YQ
Sbjct: 314 YQ 315
>gi|426360445|ref|XP_004047453.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Gorilla gorilla gorilla]
Length = 382
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/356 (58%), Positives = 250/356 (70%), Gaps = 36/356 (10%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EK------------------------SRLFRAFETVPCVAKKADW----ALNWIDGSETF 157
++ S L + + V + L I ET
Sbjct: 151 KRYCWDFIYKILLMAWLCSDQNLFQNSMLRKDYSIVVFIVIYVYIYICKCLQCISKIETI 210
Query: 158 ----AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 213
ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 211 LCLPGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMF 270
Query: 214 SLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGC 273
L NK SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL LG
Sbjct: 271 QYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGF 330
Query: 274 GKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 331 SKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 382
>gi|345779193|ref|XP_003431837.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Canis
lupus familiaris]
Length = 299
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 233/299 (77%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQ 91
++ EA+ +EVDLS+D+ W L +DEK+FI+H+LAFFAASDGIV ENL RF +EVQ
Sbjct: 5 ERPEAARPEPDEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 EDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGA 270
L++ L NK SEERV+ I+ AVEIE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVE 244
Query: 271 LGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
LG KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVAEYQRFAVMAETTDN----VFTLDADF 299
>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 387
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 178/301 (59%), Positives = 232/301 (77%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P RF +FPI++ +W +YKKA+ S WTAEE+D S+D+ W L+ +EKHFI +
Sbjct: 73 EPMLLPTLSRFTVFPIEHENLWTLYKKAQMSNWTAEEIDFSKDMDDWNELSDNEKHFIKY 132
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F E+Q++EAR+FY +Q E +H E YS L++ YIKNS E
Sbjct: 133 ILAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQSHNEMVHGETYSKLIDKYIKNSSE 192
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF A +T+PC+ +KA WA+ W D FAERL+AFACVEGIFFSGSFCAIFWLKKRG
Sbjct: 193 KKQLFEAIQTIPCIERKAKWAMKWFDKKRPFAERLLAFACVEGIFFSGSFCAIFWLKKRG 252
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
L+PGL FSNELISRDEG+H +FA L+++L+NK S+ ++ I+++AV IE+EF+ DALPC
Sbjct: 253 LLPGLCFSNELISRDEGMHQEFAVELFNMLKNKPSQNTIEEIIRDAVSIEKEFITDALPC 312
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN MS+YIE+VADRL +G K++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 313 SLIGMNSGKMSEYIEYVADRLSKQVGHNKIWNTKNPFDFMENISLDGKTNFFEKRVGDYG 372
Query: 307 K 307
K
Sbjct: 373 K 373
>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
Indica Group]
Length = 233
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/233 (81%), Positives = 209/233 (89%), Gaps = 1/233 (0%)
Query: 19 MFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGI 77
MFPI+YP+IWE YKKA ASFWTAEEVDLS D R W++ L+ DE+HF++HVLAFFAASDGI
Sbjct: 1 MFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFVSHVLAFFAASDGI 60
Query: 78 VLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETV 137
VLENLA+RFM +VQV+EARAFYGFQIAIENIHSEMYSLLLETYI++ EK RLFRA +TV
Sbjct: 61 VLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDRLFRAIDTV 120
Query: 138 PCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 197
P V +KADWA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL
Sbjct: 121 PAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 180
Query: 198 ISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVG 250
ISRDEGLHCDFACLLY LLR KL E RV+ IV +AV+IEREFVCDALP ALVG
Sbjct: 181 ISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDALPVALVG 233
>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
sapiens]
gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 3 [Pan troglodytes]
gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
[Homo sapiens]
gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
sapiens]
Length = 299
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 234/299 (78%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQ 91
++ EA+ +EVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +EVQ
Sbjct: 5 ERPEAAGLDQDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGA 270
L++ L NK SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVE 244
Query: 271 LGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
LG KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|402878879|ref|XP_003903091.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 3 [Papio anubis]
Length = 299
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/298 (65%), Positives = 233/298 (78%), Gaps = 5/298 (1%)
Query: 33 KAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQV 92
+ EA+ +EVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +EVQV
Sbjct: 6 RPEAAGLDLDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQV 65
Query: 93 SEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI- 151
EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI
Sbjct: 66 PEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIA 125
Query: 152 DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 211
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL
Sbjct: 126 DRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 185
Query: 212 LYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGAL 271
++ L NK SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL L
Sbjct: 186 MFQYLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVEL 245
Query: 272 GCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
G K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 246 GFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|335286238|ref|XP_003355054.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Sus scrofa]
Length = 299
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 232/299 (77%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQ 91
++ EA+ EEVDLS+D+ W L +DEK+FI+H+LAFFAASDGIV ENL RF +EVQ
Sbjct: 5 ERPEAAGSEQEEVDLSKDLPHWNRLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKQREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKATFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGA 270
L++ L NK SE RV+ I+ AVEIE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLTE 244
Query: 271 LGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
LG KV+ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/213 (90%), Positives = 201/213 (94%)
Query: 49 DIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENI 108
D+ WE+LT DEKHFI+HVLAFFAASDGIVLEN+A RFMKEVQVSEARAFYGFQIAIENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 109 HSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVE 168
HSEMYSLLLETYIK+S EK+RLF A ETVPCVAKKA+WAL WIDG E+FAERLIAFACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGI 228
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVKGI
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGI 180
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIE 261
VKEAVEIEREFV D+LPCALVGMNG LMSQYIE
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
Length = 323
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL + RF ++PI++ +IW YKKA ASFWT EEVD+ +D+ WE L+ADEK FI+
Sbjct: 4 EPLLVESGIRFVIYPIEHHDIWSFYKKALASFWTTEEVDVGKDMADWERLSADEKKFIST 63
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV+ENL +RF EV++ EAR FYGFQIA+ENIHSE Y+ L+ETYIK+ E
Sbjct: 64 VLAFFAASDGIVVENLCSRFANEVKIVEARFFYGFQIAVENIHSETYAKLIETYIKDERE 123
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A + + KKADWAL WI D + FA RL+AFA VEGIFFSGSF +IFWLKKR
Sbjct: 124 RLVLFDAIKNFEFIKKKADWALRWISDMTSPFAHRLVAFAAVEGIFFSGSFASIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GL+PGLT SNELISRDEGLH DFACLL++ + +K S E V IV EAV IE EF+ ALP
Sbjct: 184 GLLPGLTHSNELISRDEGLHRDFACLLFTKIVDKPSREIVCEIVDEAVTIELEFLDQALP 243
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LMSQYI++VAD LL LG K+Y NPFD+ME IS+ GKTNFFEKRV EY
Sbjct: 244 VNVIGMNYTLMSQYIKYVADHLLEELGFEKLYHTINPFDFMENISIDGKTNFFEKRVSEY 303
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
Q++ VM+ + + VF++D +F
Sbjct: 304 QRSGVMA----DAEDRVFRLDANF 323
>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide, partial [Homo
sapiens]
Length = 285
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/289 (67%), Positives = 229/289 (79%), Gaps = 5/289 (1%)
Query: 42 EEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGF 101
EEVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +EVQV EAR FYGF
Sbjct: 1 EEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGF 60
Query: 102 QIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAER 160
QI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI D TF ER
Sbjct: 61 QILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGER 120
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKL 220
++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK
Sbjct: 121 VVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKP 180
Query: 221 SEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL LG KV+
Sbjct: 181 SEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAE 240
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 241 NPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 285
>gi|403299936|ref|XP_003940727.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Saimiri boliviensis boliviensis]
Length = 299
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/299 (65%), Positives = 233/299 (77%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQ 91
++ EA+ +EVDLS+D+ W L ADEK+FI+H+LAFFAASDGIV ENL RF +EVQ
Sbjct: 5 ERPEAARLDQDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI++ ++ LF A ET+P V KKADWAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGA 270
L++ L NK SEERV+ I+ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVE 244
Query: 271 LGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
LG K + NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKFFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/213 (89%), Positives = 200/213 (93%)
Query: 49 DIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENI 108
D+ WE+LT DEKHFI+HVLAFF ASDGIVLEN+A RFMKEVQVSEARAFYGFQIAIENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFVASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 109 HSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVE 168
HSEMYSLLLETYIK+S EK+RLF A ETVPCVAKKA+WAL WIDG E+FAERLIAFACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGI 228
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVKGI
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGI 180
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIE 261
VKEAVEIEREFV D+LPCALVGMNG LMSQYIE
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/213 (89%), Positives = 200/213 (93%)
Query: 49 DIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENI 108
D+ WE+LT DEKHFI+HVLAFFAASDGIVLEN+A RFMKEVQVSEARAFYGFQIAIENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 109 HSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVE 168
HSEMYSLLLETYIK+S EK+RLF A ETVPCVAKKA+WAL WIDG E+FAERLIAFACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGI 228
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL EERVKGI
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLGEERVKGI 180
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIE 261
VKEAVEIEREFV D+LPCALVGMNG LMSQYIE
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
Length = 350
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/324 (62%), Positives = 237/324 (73%), Gaps = 20/324 (6%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL NP+RF +FPI++ +IW+ YKKA ASFWT +EVDLS+D R WE+L E+HFI+
Sbjct: 46 EILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISR 105
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEM
Sbjct: 106 VLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSEM-------------- 151
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
S LF A V KKADWAL WI D +AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 152 -SLLFNAIYEFEFVKKKADWALCWIADIKAPYAERLIAFAAVEGIFFSGSFAAIFWLKKR 210
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLY+ ++NK SEER+ I++EAV+IE+E++ +ALP
Sbjct: 211 GLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEERIYQIIREAVDIEKEYLTEALP 270
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N LM QYIE+VAD LL L C K+Y NPFD+ME IS++ KTNFFEKRV EY
Sbjct: 271 VDLIGINCKLMCQYIEYVADHLLTELHCAKMYYSDNPFDFMERISIEAKTNFFEKRVSEY 330
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V+ S G FK+D DF
Sbjct: 331 QKAGVLCSEEGKS----FKLDSDF 350
>gi|448930767|gb|AGE54331.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus IL-5-2s1]
Length = 324
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 236/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L+ N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W + L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWRDKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I N
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISN 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM QYIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|448925009|gb|AGE48590.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus AN69C]
gi|448930394|gb|AGE53959.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus IL-3A]
gi|448933837|gb|AGE57392.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NE-JV-4]
Length = 333
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 236/328 (71%), Gaps = 7/328 (2%)
Query: 4 IPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEK 61
+ +EP+L N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+
Sbjct: 11 VNQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDER 70
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I
Sbjct: 71 HFIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALI 130
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+ E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFW
Sbjct: 131 SDEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFW 190
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
L+ +G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+C
Sbjct: 191 LRNKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFIC 250
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DA+PC L+GMN LM QYIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKR
Sbjct: 251 DAIPCRLIGMNADLMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKR 310
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V +YQ+ VM +++F +D+DF
Sbjct: 311 VSDYQRPGVMKP-----EDNIFAIDDDF 333
>gi|448931455|gb|AGE55017.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1D]
gi|448934897|gb|AGE58449.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NY-2B]
gi|448935281|gb|AGE58832.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NYs1]
Length = 324
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 236/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L+ N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM QYIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
Length = 324
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 236/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L+ N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM QYIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNSELMGQYIEFVADRIFIALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|9632043|ref|NP_048832.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|1620147|gb|AAC96843.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 324
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 235/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM QYIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|448931089|gb|AGE54652.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus KS1B]
Length = 324
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 235/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM QYIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNADLMGQYIEFVADRIFIALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 387
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 176/300 (58%), Positives = 233/300 (77%)
Query: 8 PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHV 67
P+L P RF +FPI++ +W +YKKA+ S WTAEE+D S+D+ W L+ +EKHFI ++
Sbjct: 74 PMLLPTLSRFTVFPIKHENLWSLYKKAQMSNWTAEEIDFSKDMDDWNGLSDNEKHFIKYI 133
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFA SDGIV EN+ F E+Q++EAR+FY +Q E +H E YS L++ YIK+S EK
Sbjct: 134 LAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQAHNEMVHGETYSKLIDKYIKSSTEK 193
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
++LF A +T+PC+ +KA WA+ W D FAERL+AFACVEGIFFSGSFCAI+WLKKRGL
Sbjct: 194 NQLFEAIQTIPCIERKAKWAMKWFDKKRPFAERLLAFACVEGIFFSGSFCAIYWLKKRGL 253
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
+PGL FSNELISRDEG+H +FA L+++L+NK S E ++ I+++AV IE+EF+ DALPC+
Sbjct: 254 LPGLCFSNELISRDEGMHQEFAVELFNMLKNKPSGEIIEEIIRDAVTIEKEFITDALPCS 313
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN + MS+YIE+VADRL +G K++ NPFD+ME ISL GKTNFFEKRVG+Y K
Sbjct: 314 LIGMNSSKMSEYIEYVADRLSKQVGHDKIWNTKNPFDFMENISLDGKTNFFEKRVGDYGK 373
>gi|422933799|ref|YP_007003842.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 2]
gi|386686112|gb|AFJ20464.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 2]
Length = 337
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/308 (61%), Positives = 237/308 (76%), Gaps = 2/308 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M +P EPLL + + + +IWEMYKKA+ S WTAEE+DL++D+ W +L+ DE
Sbjct: 10 MTFVPYEPLLHDTSVSKYILQVTHKDIWEMYKKAQNSNWTAEEIDLAKDMDGWYALSKDE 69
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+ +VLAFFAASDGIV ENL RF +EVQ EA+ FYGFQ+AIEN+HSE+Y+ LL TY
Sbjct: 70 QHFLKYVLAFFAASDGIVNENLCERFTREVQYVEAKCFYGFQMAIENVHSEVYAKLLMTY 129
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAI 179
I + E+ RLF A E +P + +KA WA+ WI+ S TF ERL+AFA VEGIFFSGSF AI
Sbjct: 130 ITDVAERDRLFGAIEHIPSIKRKARWAMKWINSQSATFGERLVAFAAVEGIFFSGSFAAI 189
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIERE 238
FWLK++G MPGL FSNELISRDEGLH DFACLLY+ L +K S+E V I+KEAVEIE+E
Sbjct: 190 FWLKQKGTMPGLYFSNELISRDEGLHRDFACLLYTGHLLHKPSQETVYSIIKEAVEIEKE 249
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+ ++LP +L+GMN LMSQYIE+VAD LL LG ++Y NPFD+ME ISL+GKTNFF
Sbjct: 250 FLTESLPVSLLGMNNRLMSQYIEYVADHLLCQLGLARLYSTPNPFDFMENISLEGKTNFF 309
Query: 299 EKRVGEYQ 306
EKRVG+YQ
Sbjct: 310 EKRVGDYQ 317
>gi|448931839|gb|AGE55400.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1E]
Length = 324
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 235/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM +YIEFVADR+ ALG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNATLMKEYIEFVADRIFIALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|448928017|gb|AGE51589.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CviKI]
gi|448929037|gb|AGE52606.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CvsA1]
Length = 324
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 234/326 (71%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L N R F FPIQYP++W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A E +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKL E VK I+ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM +YIEFVADR+ LG KVY NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNATLMKEYIEFVADRIFVTLGYDKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM +++F +D+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
Length = 322
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/302 (60%), Positives = 229/302 (75%), Gaps = 1/302 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
+P+L +RF +FP++YP +WE+YKKA+ S WTAEEVDLS+D+ W++L +E+ FI +
Sbjct: 7 DPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKY 66
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 67 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSE 126
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A +TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 127 KKELFEAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LRN+ + + IV+EAVEIE+ F+ DALP
Sbjct: 187 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVREAVEIEKGFILDALP 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 247 CNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWNSKNPFDFMENISLDGKTNFFEKRVGDY 306
Query: 306 QK 307
K
Sbjct: 307 GK 308
>gi|448926466|gb|AGE50042.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Canal-1]
Length = 325
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 237/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTP-NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EPLL ++ FPI+YP+I++MYKKA A+FWT EEV L+QD+ W E L DE+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+L FFA SDG+V+ENL F +EV AR FY +Q E++HSE YSLLL+ I++
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
DE+++LF A ET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 DERNQLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L NKL+ E VK IV+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLALETVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMS YIEF+ADR+ ALG K YG NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSELMSHYIEFIADRIFVALGYPKQYGSENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NAEDNVFAIDADF 325
>gi|260666020|ref|YP_003212974.1| hypothetical protein H665_p151 [Ostreococcus tauri virus 1]
gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
Length = 389
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/302 (60%), Positives = 229/302 (75%), Gaps = 1/302 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L +RF +FP++YP +WE+YKKA+ S WTAEEVDLS+D+ W++L +E+ FI +
Sbjct: 74 EPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA SDGIV EN+ F EVQ+SEAR+FY +Q E +H E YS L++ YIK+ E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSE 193
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A +TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 194 KKELFEAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LRN+ + + IV+EAV+IE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVREAVDIEKGFILDALP 313
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWNSKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QK 307
K
Sbjct: 374 GK 375
>gi|431901752|gb|ELK08629.1| Ribonucleoside-diphosphate reductase subunit M2 B [Pteropus alecto]
Length = 318
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/325 (60%), Positives = 233/325 (71%), Gaps = 33/325 (10%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 26 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 85
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL+ TYI++
Sbjct: 86 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIHTYIRDPK 145
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF
Sbjct: 146 KRDFLFNAIETMPYVKKKADWALRWIADRKSTF--------------------------- 178
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 179 -GLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREVIVNAVEIEQEFLTEAL 237
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 238 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKIFHAENPFDFMENISLEGKTNFFEKRVSE 297
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 298 YQRFAVMAETTDN----VFTLDADF 318
>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|448925781|gb|AGE49359.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Can0610SP]
gi|448932290|gb|AGE55849.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus MO0605SPH]
gi|448932944|gb|AGE56501.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NE-JV-2]
gi|448933285|gb|AGE56841.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NE-JV-3]
gi|448933961|gb|AGE57515.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NTS-1]
gi|448935746|gb|AGE59295.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus OR0704.3]
gi|448936417|gb|AGE59964.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus WI0606]
Length = 325
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 237/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTP-NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EPLL ++ FPI+YP+I++MYKKA A+FWT EEV L+QD+ W E L DE+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+L FFA SDG+V+ENL F +EV AR FY +Q E++HSE YSLLL+ I++
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQGYNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+++LF A ET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNKLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L NKLS + VK IV+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMSQYIEFVADR+ ALG K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDADF 325
>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 1]
Length = 324
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/303 (61%), Positives = 238/303 (78%), Gaps = 1/303 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLLT + +RF MFPI IW+MYKK FW AEE+D S+D+ W L +E+++I
Sbjct: 7 EPLLTEDDNRFVMFPIVDEAIWKMYKKQVDCFWRAEEIDTSKDLNHWNKLQPEEQYYIKM 66
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA+SDGIVLENL RFM EVQ+SEARAFYGFQIA+ENIHSE YSLL+++YIK+ +E
Sbjct: 67 ILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSYIKDENE 126
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF + E PC+ KK WA+ WI D F+ RL+AFACVEGIFFSG+FC+I+WLKKR
Sbjct: 127 KNKLFHSLEHFPCIEKKGKWAMKWINDKKSNFSTRLVAFACVEGIFFSGAFCSIYWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDE LH +FA L+ L K+++++++ I++EAV IE+EF+ ++LP
Sbjct: 187 GIMPGLTFSNELISRDEALHTEFAVHLFHKLEKKINKKKIREIIEEAVVIEKEFIVESLP 246
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM+QYIE+VADRL+ LGC ++Y NPFD+MELISL+ KTNFFE RV EY
Sbjct: 247 CRLIGMNSDLMTQYIEYVADRLMIQLGCEEIYRTNNPFDFMELISLEQKTNFFESRVSEY 306
Query: 306 QKA 308
A
Sbjct: 307 SLA 309
>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
mulatta]
Length = 704
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/329 (60%), Positives = 234/329 (71%), Gaps = 35/329 (10%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 410 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 469
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 470 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 529
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 530 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 589
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDE V + +
Sbjct: 590 WLKKRGLMPGLTFSNELISRDE------------------------------VSLNQIIG 619
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 620 XXXXXXXXIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 679
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 680 RVGEYQRMGVMSSPTENS----FTLDADF 704
>gi|448929830|gb|AGE53396.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus GM0701.1]
Length = 325
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 236/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTP-NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EPLL ++ FPI+YP+I++MYKKA A+FWT EEV L+QD+ W E L DE+HFI
Sbjct: 6 EPLLANIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+L FFA SDG+V+ENL F +EV AR FY +Q E++HSE YSLLL+ I++
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+++LF A ET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS E VK IV+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLETVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMSQYIEFVADR+ ALG K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDGDF 325
>gi|448925447|gb|AGE49026.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Br0604L]
Length = 325
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/325 (58%), Positives = 236/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTP-NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EPLL ++ FPI+YP+I++MYKKA A+FWT EEV L+QD+ W E L DE+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+L FFA SDG+V+ENL F +EV AR FY +Q E++HSE YSLLL+ I++
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+++LF A ET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS + VK IV+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMSQYIEFVADR+ ALG K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDADF 325
>gi|448936080|gb|AGE59628.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus TN603.4.2]
Length = 325
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/325 (58%), Positives = 236/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTP-NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EPLL ++ FPI+YP+I++MYKKA A+FWT EEV L+QD+ W E L DE+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+L FFA SDG+V+ENL F +EV AR FY +Q E++HSE YSLLL+ I++
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+++LF A ET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS + VK IV+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMSQYIEFVADR+ ALG K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDGDF 325
>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
Length = 324
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 235/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EP+L+ N R F FPIQY ++W MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYHDLWNMYKKAVATFWTTEEVPLNADVADWREKLNNDERHF 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I H+L FFA SDGIV+ENL F EV EAR FY +Q E++HSEMY+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFGVEVMAPEARQFYAYQTFNESVHSEMYALLIDALISD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ LF A ET+P V KA WA W+ +FAERL+A+ CVEGI FSGSFCA+FWL+
Sbjct: 124 EQERLDLFDAIETIPAVHNKAKWAQKWLKPERSFAERLVAWICVEGILFSGSFCALFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+NKLS E +K I+ EAV E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLSFETIKQIIMEAVTNEKEFICDA 243
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC+++GMN LM+QYIEFVADR+ ALG KVY NPF +MELISL+GKTNFFEKRV
Sbjct: 244 IPCSMIGMNADLMNQYIEFVADRIFTALGYEKVYNSKNPFAFMELISLEGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+YQ+ VM N +++F +D+DF
Sbjct: 304 DYQRPGVM-----NPEDNIFAIDDDF 324
>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
Length = 348
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 23 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 82
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 83 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 142
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 143 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 202
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 203 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 262
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 263 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 322
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
E+RV EYQ+ VM N ++VF MD DF
Sbjct: 323 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 348
>gi|448926378|gb|AGE49955.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus Can18-4]
Length = 359
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 34 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 93
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 94 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 153
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 154 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 213
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 214 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 273
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 274 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 333
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRV EYQ+ VM N ++VF MD DF
Sbjct: 334 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 359
>gi|448925356|gb|AGE48936.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus AP110A]
gi|448935661|gb|AGE59211.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus OR0704.2.2]
Length = 326
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 1 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
E+RV EYQ+ VM N ++VF MD DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|448928392|gb|AGE51963.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVM-1]
Length = 326
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 1 MTIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
E+RV EYQ+ VM N ++VF MD DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|370703011|ref|YP_004956813.1| orf65 gene product [Helicoverpa zea nudivirus 2]
gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
gi|365199608|gb|AEW69614.1| ribonuclease reductase [Helicoverpa zea nudivirus 2]
Length = 333
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/332 (58%), Positives = 242/332 (72%), Gaps = 20/332 (6%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEP RF +FPI+Y +IWEMYKKA+ASFWT EEVDLS+D+ WE+ LT E+ FI
Sbjct: 14 EEP-----SSRFTLFPIRYHDIWEMYKKAQASFWTVEEVDLSKDLYDWETRLTETEREFI 68
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+H+LAFFA SDGIV +NL RF +E+ + E FYGFQI IEN+HSEMYS L++ YI++
Sbjct: 69 SHILAFFAGSDGIVNDNLLTRFSQELTIPEVSCFYGFQIMIENVHSEMYSTLIDMYIRDP 128
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
K LF A +TVP + KKA W + WID + ++A+RL+AFA VEGIFFSGSF AIFWLK
Sbjct: 129 QRKHMLFNAIDTVPSIRKKAQWVIRWIDDDKSSYADRLVAFAAVEGIFFSGSFAAIFWLK 188
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKL------SEERVKGIVKEAVEIER 237
KRGLMPGLT SNE ISRDEGLHCDFA LL+ RN L S+E+V IV +AV IE+
Sbjct: 189 KRGLMPGLTHSNEFISRDEGLHCDFAILLF---RNYLRPECRSSDEKVINIVTDAVRIEQ 245
Query: 238 EFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNF 297
EF+ ++LP +++GMN LM +YIEFVADRLL L K+Y NPFD+M ISL+GKTNF
Sbjct: 246 EFLTESLPVSMIGMNCKLMCEYIEFVADRLLYELIGRKIYNAKNPFDFMTSISLEGKTNF 305
Query: 298 FEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
FEK+V EY++ V +L N VFK+ EDF
Sbjct: 306 FEKKVSEYKRYGVGVNLEDN----VFKISEDF 333
>gi|448929397|gb|AGE52965.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CZ-2]
gi|448934571|gb|AGE58124.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NW665.2]
Length = 326
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 1 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRV EYQ+ VM N ++VF MD DF
Sbjct: 301 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 326
>gi|448927709|gb|AGE51282.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVG-1]
Length = 326
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 1 MAIINQEPLLADIGNRKYSAFPIKYPDVFGMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRV EYQ+ VM N ++VF MD DF
Sbjct: 301 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 326
>gi|448927342|gb|AGE50916.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVB-1]
Length = 326
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R F FPI++P+I+ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 1 MTIINKEPLLADIGNRKFSAFPIKFPDIFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
E+RV EYQ+ VM N ++VF MD DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|448929743|gb|AGE53310.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus Fr5L]
Length = 326
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 239/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI+YP+++ MYKKA +FWT EEV L+QDI W + L
Sbjct: 1 MAIINKEPLLADIGNRKYSAFPIKYPDVFAMYKKAVTTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRV EYQ+ VM N ++VF MD DF
Sbjct: 301 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 326
>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
virus MT325]
Length = 326
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 238/326 (73%), Gaps = 7/326 (2%)
Query: 6 EEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHF 63
+EPLL +R + FPI+YP+++ MYKKA ++FWT EEV L+QDI W + L DE+HF
Sbjct: 6 QEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERHF 65
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+ I++
Sbjct: 66 IKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIED 125
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 DAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWLR 185
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+EF+C+A
Sbjct: 186 NRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICEA 245
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFFE+RV
Sbjct: 246 IPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFFERRVS 305
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
EYQ+ VM N ++VF MD DF
Sbjct: 306 EYQRPGVM-----NAEDNVFDMDGDF 326
>gi|448931953|gb|AGE55513.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus MN0810.1]
Length = 325
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 235/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTP-NPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
EPLL ++ FPI+YP+I++MYKKA A+FWT EEV L+QD+ W E L DE+HFI
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
H+L FFA SDG+V+ENL F +EV AR FY +Q E++HSE YSLLL+ I++
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+++LF A ET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 AERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RG+MPGL SNE ISRDEGLH F LLYS L KLS + VK IV+EAV E++F+CDA+
Sbjct: 186 RGIMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMS YIEFVADR+ ALG K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSAYIEFVADRIFIALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NAEDNVFALDGDF 325
>gi|448927042|gb|AGE50617.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVA-1]
gi|448928726|gb|AGE52296.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVR-1]
Length = 326
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLTPNPDR-FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTA 58
M I +EPLL +R + FPI++P+++ MYKKA ++FWT EEV L+QDI W + L
Sbjct: 1 MAIINKEPLLADIGNRKYSAFPIKFPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HFI +L FFA SDG+V+EN+A F EV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I++ E++ LF A ET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L NKLS +VK IV+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN LM QY+EFVADR+ ALG K Y TNPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
E+RV EYQ+ VM N ++VF MD DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|448932723|gb|AGE56281.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NE-JV-1]
Length = 325
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 235/325 (72%), Gaps = 7/325 (2%)
Query: 7 EPLLTPN-PDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFI 64
E LL N +++ FPI++P+++ MYKKA ++FWT EEV L QDI W + LT DE++FI
Sbjct: 6 ESLLADNKSNKYSAFPIKHPDLFAMYKKAVSTFWTVEEVPLHQDIADWRDKLTGDERYFI 65
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
HVL FFA SDGIV+EN+A F EV AR FY +Q+ E++HSEMYSLLL+ +++
Sbjct: 66 KHVLGFFAGSDGIVMENIANNFSTEVTDPSARLFYAYQMFNESVHSEMYSLLLDALVEDE 125
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF A ET+P V KKA WA+N++ ++FAERL+A+ CVEG+ FSGSFCAIFW +
Sbjct: 126 TERNSLFEAIETIPAVGKKASWAINYLSPQKSFAERLVAWICVEGLLFSGSFCAIFWFRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F L+YS L NKLS E VK IV+EAV E+EF+ DA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELMYSKLENKLSLETVKSIVEEAVANEKEFIIDAI 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN LMSQYIEF+ADR+ ALG K Y NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNQELMSQYIEFIADRIFAALGYPKQYNAANPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
Y + VM ++VF D DF
Sbjct: 306 YARPGVMKP-----EDNVFSTDGDF 325
>gi|282174133|ref|YP_003358235.1| ribonucleotide reductase subunit 2 [Anguillid herpesvirus 1]
gi|281308976|gb|ADA57859.1| ribonucleotide reductase subunit 2 [Anguillid herpesvirus 1]
Length = 328
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/326 (58%), Positives = 233/326 (71%), Gaps = 7/326 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EPLL P +R FPI+ IW MYK A+A+ W+AEEVDL+QD+ WE L DE+HFI+
Sbjct: 7 EPLLDPANNRDVTFPIREHAIWAMYKTAQAANWSAEEVDLAQDVTHWEKRLNKDERHFIS 66
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAA+DG+V NL RF +EVQ EA FY FQ+AIEN+H+EMYS L+ T IK+
Sbjct: 67 HVLAFFAAADGLVNANLGQRFTQEVQYLEATYFYNFQMAIENVHAEMYSKLIATLIKDVK 126
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ RLF A E +PC+AKKA+WA W D + +F ERL+AFA VEGIFFSG+F AIFWLK
Sbjct: 127 EQDRLFNAVERMPCIAKKAEWAKRWTHDTNASFGERLVAFAAVEGIFFSGAFAAIFWLKP 186
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
RG+MPGL SNE ISRDEGLHCDFACLL+ + K ERV IV EAVEIE+EF+ +A
Sbjct: 187 RGIMPGLIMSNEFISRDEGLHCDFACLLFKDHILGKPGYERVSQIVTEAVEIEKEFLSEA 246
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP L+G+N M YIEFVADRLL ALG K Y V NPF +ME IS++GKTNFFEK V
Sbjct: 247 LPVRLLGINCEQMCSYIEFVADRLLAALGFPKRYHVKNPFGFMESISMEGKTNFFEKNVS 306
Query: 304 EYQKASVMSSLNGNGGNHVFKMDEDF 329
+Y+K + + F +DEDF
Sbjct: 307 QYKK----FTFSDKDDKTCFSIDEDF 328
>gi|417659|sp|P32209.1|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
Length = 274
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 216/269 (80%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + RF +FPI+Y +IW+MYK++ ASFWT EEVDLS+D+ W+ LT DEK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA+SDGIV ENLA RF +VQ SEAR FYGFQIA+ENIHSEMYSLL++TY++++ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A ET+ CV KKADWA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + S+E + I+ +AV IE+EF+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGK 275
L+GMN LMSQYIEFVADRLL LGC K
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEK 270
>gi|349603084|gb|AEP99024.1| Ribonucleoside-diphosphate reductase subunit M2-like protein,
partial [Equus caballus]
Length = 261
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/265 (70%), Positives = 214/265 (80%), Gaps = 5/265 (1%)
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+S
Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 60
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 61 EREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK 120
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ AV IE+EF+ +AL
Sbjct: 121 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEAL 180
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ALM QYIEFVADRLL LG KV+ V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 181 PVRLIGMNCALMKQYIEFVADRLLLELGFNKVFRVENPFDFMENISLEGKTNFFEKRVGE 240
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VMSS N F +D DF
Sbjct: 241 YQRMGVMSSPTENS----FTLDADF 261
>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
Length = 407
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/288 (63%), Positives = 221/288 (76%), Gaps = 18/288 (6%)
Query: 43 EVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQ 102
+VDLS+D++ WESL DE+ FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQ
Sbjct: 137 QVDLSKDLQHWESLKDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQ 196
Query: 103 IAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERL 161
IA+ENIHSEMYSLL++TYIK E+ LF A ET+PCV KKADWALNWI + ++ ER+
Sbjct: 197 IAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKKADWALNWIGNQKASYGERV 256
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS 221
+AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K S
Sbjct: 257 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPS 316
Query: 222 EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTN 281
+ V I++ AVEIE+EF+ +ALP L+GMN LM +YIEF +Y N
Sbjct: 317 AQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLMKRYIEF-------------IYRAEN 363
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
PFD+ME ISL+GKTNFFEKRVGEYQ+ VM+ ++ F++D DF
Sbjct: 364 PFDFMENISLEGKTNFFEKRVGEYQRMGVMA----GAADNTFRLDADF 407
>gi|443893923|dbj|GAC71111.1| ribonucleotide reductase, beta subunit [Pseudozyma antarctica T-34]
Length = 280
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/277 (65%), Positives = 218/277 (78%), Gaps = 2/277 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVLENLAARFMK 88
MYKKAEASFWTAEE+DLS+D+ W++ L +E+HFI+HVLAFFAASDGIV ENL RF
Sbjct: 1 MYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAASDGIVNENLVERFSS 60
Query: 89 EVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWAL 148
EVQ +EAR FYGFQI +ENIHSE YSLL++TYI+ +++ LF A ET+P V KKADWAL
Sbjct: 61 EVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQRELLFDAVETIPVVKKKADWAL 120
Query: 149 NWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 207
WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH D
Sbjct: 121 RWISDRRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTD 180
Query: 208 FACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRL 267
FACLL+S L+ + + V I+ EAVEIE++F+ +ALPC+L+GMN LM QYIE+VADRL
Sbjct: 181 FACLLFSHLKKRAHPDTVLKIITEAVEIEQKFLSEALPCSLIGMNAKLMCQYIEYVADRL 240
Query: 268 LGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
L LG + TNPFD+M+ ISL+GK + R E
Sbjct: 241 LTQLGNAPHFNSTNPFDFMDNISLEGKVSIHSFRALE 277
>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
Length = 246
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/246 (71%), Positives = 207/246 (84%), Gaps = 1/246 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++FI+H
Sbjct: 1 EPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFISH 60
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E
Sbjct: 61 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 120
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 121 RDFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFWLKKR 180
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE VK I+ AV IE+EF+ DALP
Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEETVKKIIVNAVAIEQEFLTDALP 240
Query: 246 CALVGM 251
L+GM
Sbjct: 241 VKLIGM 246
>gi|395849989|ref|XP_003797586.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 B-like [Otolemur garnettii]
Length = 615
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/325 (58%), Positives = 234/325 (72%), Gaps = 12/325 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + +F IQYP+ W+ YK+ +ASFWTAEEVDLS+D+ W L +DEK++++
Sbjct: 296 EEPLLRKSSRHCVIFAIQYPDTWKTYKQEQASFWTAEEVDLSKDLPHWNKLKSDEKYWVS 355
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGI+ EN+ +EVQV E QI IEN+HSEMYSLL +TYI +
Sbjct: 356 HILAFFAASDGIINENVVXS--QEVQVPEVX-----QILIENVHSEMYSLLTDTYIXDPK 408
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF ET+PCV KKADW L WI D T ER++AFA VE IFFSGSF AIF LKK
Sbjct: 409 KRDFLFNVIETMPCVQKKADWTLXWIADIKSTLGERVVAFAAVERIFFSGSFAAIFXLKK 468
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
R LM GLTFSNELISRDEGLHCDFA L++ NK SEERV+ I+ EAV+IE+EF+ +AL
Sbjct: 469 RVLMSGLTFSNELISRDEGLHCDFAYLIFXYFVNKPSEERVREIIIEAVKIEQEFLTEAL 528
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P LVGMN LM+QY EFVA+RLL LG KV+ NPFD+ME ISLQGKTNFFEK + E
Sbjct: 529 PVVLVGMNCILMTQYTEFVANRLLVELGFSKVFQAENPFDFMENISLQGKTNFFEKXISE 588
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ ++M+ N VF ++ DF
Sbjct: 589 YQHFAIMAETIDN----VFTLNADF 609
>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
Length = 326
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 232/323 (71%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL R+ +FPI+Y +IW++YKK EA+FWTAEE+D S+D ++ L DE+ FI +
Sbjct: 8 EELLKSENSRYTVFPIKYHKIWDLYKKMEAAFWTAEEIDWSKDKHDFKKLNQDEQRFIKY 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFF+ASD IV NL R EVQ EA+ Y FQ+ +E IHSE+Y+L ++ I++ E
Sbjct: 68 VLAFFSASDTIVNINLGERLSHEVQPLEAKIAYTFQMMMEGIHSEVYALQIDNIIEDVQE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ + + ETVPC+ K DW L W+ E+FA R++A EG+FFSGSFCAIFWLK +
Sbjct: 128 RKDILNSIETVPCIKAKTDWMLKWVKSEESFATRMVAQVISEGLFFSGSFCAIFWLKNKN 187
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+MPGL SNELI+RDEG+HCD++ +LY +L+NKLS+E+++ + K+AVE ER F+C++LPC
Sbjct: 188 IMPGLISSNELIARDEGMHCDYSIMLYHMLQNKLSQEKIQQMFKDAVETERIFICESLPC 247
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN LM QYI+FVAD+L+ LG K++ V NPF WME IS++GKTNFFE R +YQ
Sbjct: 248 SLLGMNADLMEQYIKFVADQLIIKLGYNKIFKVDNPFTWMEAISIEGKTNFFEHRPTQYQ 307
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
+A V N + N F++ +DF
Sbjct: 308 RADV----NNHTKNQAFEISDDF 326
>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/281 (63%), Positives = 216/281 (76%), Gaps = 2/281 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 54 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 113
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 114 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 173
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF A E +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 174 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 233
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + NK + ++ IV+EAV IE+EF+ ++LP
Sbjct: 234 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 291
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+L+GMN LM QYIEFVADRLL ALG K+Y V+ PFD+ME
Sbjct: 292 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSTPFDFME 332
>gi|356506867|ref|XP_003522196.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 258
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/241 (70%), Positives = 197/241 (81%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
+P I EEPLL PNPDRFCMFPIQ+ +IWEMYKK +A+FW EEVDLSQD+ W +L+ E
Sbjct: 11 LPKITEEPLLAPNPDRFCMFPIQFLQIWEMYKKVKAAFWIMEEVDLSQDLCHWATLSDGE 70
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FITHVLAFF ASDGIVLENLA RF KE+Q+ EARAFYGFQI I+NIHSEMY+LLLETY
Sbjct: 71 RPFITHVLAFFTASDGIVLENLAGRFTKEIQLPEARAFYGFQITIKNIHSEMYNLLLETY 130
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK S + +RLFRA T+PC+ KKA WAL WID SE+F E L+AFACV+ GSFC F
Sbjct: 131 IKYSTKNNRLFRAINTIPCIIKKAQWALRWIDASESFVECLMAFACVKEXILLGSFCVTF 190
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLM GLTFSN+LI RD GLHCDF CLLYSLL+ KLSEERV+ I+ + VEIER+FV
Sbjct: 191 WLKKRGLMSGLTFSNKLILRDWGLHCDFMCLLYSLLQKKLSEERVREIMHDVVEIERKFV 250
Query: 241 C 241
C
Sbjct: 251 C 251
>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 290
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 222/295 (75%), Gaps = 7/295 (2%)
Query: 35 EASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSE 94
E++FWT EEVD++ D + +LT +E+ FI +VLAFFAASDGIV ENL RF EVQ+ E
Sbjct: 3 ESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILE 62
Query: 95 ARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS 154
A+ FYGFQIAIENIHSEMYS L+ET I++ +E++ LF A E +P + KKA WA WI
Sbjct: 63 AKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASD 122
Query: 155 ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 214
+F R +AFACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+
Sbjct: 123 TSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHK 182
Query: 215 LLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCG 274
+ NK + ++ IV+EAV IE+EF+ ++LP +L+GMN LM QYIEFVADRLL ALG
Sbjct: 183 YINNKCT--VIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEK 240
Query: 275 KVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
K+Y V+NPFD+ME ISLQGKTNFFE+R YQK V G F ++E+F
Sbjct: 241 KIYNVSNPFDFMENISLQGKTNFFERRETNYQKGYV-----GIDNEFKFNLNENF 290
>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 269
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/254 (69%), Positives = 204/254 (80%), Gaps = 1/254 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKE 89
MYKKAEASFWT EEVDLS+D+ W+ L DEKHFI H+LAFFAASDGIV ENL RF +E
Sbjct: 1 MYKKAEASFWTVEEVDLSKDLSDWDKLKDDEKHFIKHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALN 149
VQ++EAR FYGFQIA+EN+HSEMYSLL++TYI++SDE+ LF A ET+PC+ KKADWAL
Sbjct: 61 VQITEARCFYGFQIAMENVHSEMYSLLIDTYIRDSDERDYLFNAIETLPCIKKKADWALK 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI S FAER++AFA VEGIFFSGSF +IFWLKKRGL+PGLTFSNELISRDEGLH DF
Sbjct: 121 WISSNSANFAERIVAFAAVEGIFFSGSFASIFWLKKRGLLPGLTFSNELISRDEGLHTDF 180
Query: 209 ACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL 268
ACL+Y+ + K RV I+KEAV IE++F+ DALP L+GMN LMSQYIEFVADRLL
Sbjct: 181 ACLMYNYVVQKPPNSRVIEILKEAVVIEKDFLTDALPVRLLGMNCDLMSQYIEFVADRLL 240
Query: 269 GALGCGKVYGVTNP 282
L K Y NP
Sbjct: 241 YELIGEKYYNAKNP 254
>gi|432951682|ref|XP_004084883.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Oryzias latipes]
Length = 265
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 171/246 (69%), Positives = 202/246 (82%), Gaps = 1/246 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FP+QY +IW+MYKKAEASFWTAEEVDLS+D++ WE+L DE+ FI+
Sbjct: 18 EEPLLKENPRRFVIFPVQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKDDERFFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 78 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF A ET+PCV +KADWALNWI + ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 138 EREYLFNAIETLPCVKRKADWALNWIGNKHAAYGERVVAFAAVEGIFFSGSFAAIFWLKK 197
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK S E V I++ AVEIE+EF+ +AL
Sbjct: 198 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSSETVTEIIRNAVEIEQEFLTEAL 257
Query: 245 PCALVG 250
++
Sbjct: 258 NSEIIA 263
>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 345
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/297 (60%), Positives = 214/297 (72%), Gaps = 1/297 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPI Y IW MYKK EAS W E V+L D+ W +T +E+HFI++
Sbjct: 38 EPLLKDNPRRFVIFPIIYDNIWAMYKKHEASLWNIEAVNLKSDLEDWMRMTDEERHFISY 97
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAF AAS+GIV ENL RF +EVQV+EAR FYGFQI IENIHSEMYSLL++TYIK+ E
Sbjct: 98 ILAFLAASNGIVSENLVKRFSQEVQVTEARCFYGFQIMIENIHSEMYSLLIDTYIKDPKE 157
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K L A ET+PCV K ADW L WI D TF ERL+ FA V+GIF SG+ +I WL KR
Sbjct: 158 KETLINATETMPCVKKMADWVLKWITDSKATFGERLVTFAAVKGIFLSGNVPSITWLTKR 217
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLM GLTFSNELI RDEGLH DFACLL+ L K + I+ +AV IE+ F+ +AL
Sbjct: 218 GLMLGLTFSNELIFRDEGLHTDFACLLFKHLDQKPPLTVITHIICKAVTIEQYFLTNALL 277
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+VGM+ M++YIEFVADRLL LGC VY +NPF +M+L+S QGKTN FEKRV
Sbjct: 278 VKMVGMSCEKMAEYIEFVADRLLNELGCPAVYRSSNPFPFMDLLSQQGKTNGFEKRV 334
>gi|392558190|gb|EIW51392.1| putative ribonucleoside-diphosphate reductase small chain B
[Trametes versicolor FP-101664 SS1]
Length = 331
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 170/315 (53%), Positives = 222/315 (70%), Gaps = 2/315 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
M + + +L P+ RF ++PI+YPEIW+ YK A+ASFWTA+E+DLS D+R W LT +
Sbjct: 1 MTTPTNDAILKPSTSRFILYPIKYPEIWDAYKTAQASFWTADEIDLSADVRHWTCRLTDE 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+ FI+ +LAFFAASDG+V ENL RF EVQ+ EAR FYGFQI +ENIH+E Y+ +L T
Sbjct: 61 ERAFISILLAFFAASDGMVNENLLERFCAEVQIPEARCFYGFQIMMENIHAETYASMLTT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCA 178
I+++ E+ RLF A T+P + KA+W + WI D + FA RLIAFA VEGIFFS SF A
Sbjct: 121 LIQDNAERDRLFSATSTIPAIKAKAEWTMRWIEDKHQPFAVRLIAFAAVEGIFFSSSFAA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
IFWL+ RGL+PG+ SNELI+RDE +H FACLLYS L+ + + V+ +++EAV +E+
Sbjct: 181 IFWLRSRGLLPGICHSNELIARDESMHTMFACLLYSQLQTRAPKATVRAVIREAVALEKS 240
Query: 239 FVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
F DALP L GMN LM Y+E VAD LL LGC +Y NPF ++ +L G+TNFF
Sbjct: 241 FFADALPTRLAGMNTELMGDYVEAVADDLLRRLGCRPIYDKENPFPFITSSALDGRTNFF 300
Query: 299 EKRVGEYQKASVMSS 313
E+RV EY S M S
Sbjct: 301 ERRVSEYSAVSHMHS 315
>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 336
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/280 (62%), Positives = 212/280 (75%), Gaps = 3/280 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF A E +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + NK + ++ IV+EAV IE+EF+ ++LP
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 263
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYG-VTNPFDW 285
+L+GMN LM QYIEFVADRLL ALG K+Y +T+ W
Sbjct: 264 SLIGMNCKLMCQYIEFVADRLLFALGERKIYTFLTHSISW 303
>gi|358054708|dbj|GAA99634.1| hypothetical protein E5Q_06335 [Mixia osmundae IAM 14324]
Length = 549
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/338 (54%), Positives = 226/338 (66%), Gaps = 27/338 (7%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL +RF +FPI+Y EIW YK+A ASFWTAEE+DL+ D +ESLT E+HFI
Sbjct: 225 QEPLLQELDNRFVLFPIKYDEIWRFYKRAVASFWTAEEIDLTGDRADFESLTPGERHFIL 284
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF EV+V+EA+ FYGFQI +ENIHSE+YSLL+E Y+++
Sbjct: 285 HVLAFFAASDGIVNENLVERFSSEVKVTEAKCFYGFQIMMENIHSEVYSLLIEFYVRDKR 344
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ L + + D I F F G FFSGSF AIFWLKKR
Sbjct: 345 ERQAL--------TLGTQVD-----IRRPNDFCRATRRFCGCRGHFFSGSFAAIFWLKKR 391
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH +FACLL+ L ++ S+ RV+ I+ AV IE++F+ +ALP
Sbjct: 392 GLMPGLTFSNELISRDEGLHTEFACLLFRHLHHRPSDARVQEIITSAVTIEKDFLTEALP 451
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIE+VADRLL LG KVYG NP +ME ISL+GKTNFFEKRV +Y
Sbjct: 452 VKLIGMNSDTMSQYIEYVADRLLTTLGVEKVYGSENPLSFMENISLEGKTNFFEKRVSDY 511
Query: 306 ---------QKASVMSSLNGNGGNH-----VFKMDEDF 329
Q+AS + G H VF++D DF
Sbjct: 512 ARARMSGWTQEASGAGHADDTQGGHGNSEDVFRLDADF 549
>gi|429962574|gb|ELA42118.1| ribonucleoside-diphosphate reductase small chain, partial
[Vittaforma corneae ATCC 50505]
Length = 282
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 172/286 (60%), Positives = 219/286 (76%), Gaps = 4/286 (1%)
Query: 44 VDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQI 103
VD+ D+ ++ LT DE+HFI +VLAFFAASDGIV ENL RF E+ EA+ FYGFQI
Sbjct: 1 VDIHNDLEDFDRLTKDEQHFIKYVLAFFAASDGIVNENLVERFSSEITNLEAKCFYGFQI 60
Query: 104 AIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIA 163
A+ENIHSEMYS L+ETYI++ DEK+ LF + +T+P +A+KA WA WI+ + F R+IA
Sbjct: 61 AMENIHSEMYSKLIETYIRDEDEKNFLFNSIKTIPSIARKAAWAKKWIESTTDFDTRMIA 120
Query: 164 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEE 223
FACVEGIFFSG F AIFW+KKRGLMPGLTFSNELISRDE +H +FACLL+ + +K +
Sbjct: 121 FACVEGIFFSGCFAAIFWIKKRGLMPGLTFSNELISRDEAVHTEFACLLHKHIVSKCT-- 178
Query: 224 RVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPF 283
R++ IV+EAVEIE++F+ ++LP +L+GMN ALM QYIEFVADRLL LG K++ NPF
Sbjct: 179 RIRDIVREAVEIEKQFITESLPVSLIGMNCALMCQYIEFVADRLLYNLGEKKIFNAKNPF 238
Query: 284 DWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
D+ME ISL GKTNFF+K+ YQKA V + G+G + F+ D DF
Sbjct: 239 DFMENISLMGKTNFFDKKEANYQKAFV--GIKGDGESDSFRTDVDF 282
>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
[shrimp white spot syndrome virus]
gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
gi|417072416|gb|AFX59565.1| wsv188 [White spot syndrome virus]
Length = 413
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 168/308 (54%), Positives = 218/308 (70%), Gaps = 1/308 (0%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
L NP+RF PI + ++WEMYKK A FWT EE+D +D + WE LT DEK FI +L
Sbjct: 59 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 118
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA+SDGIV+ENL R + Q+ EAR+F+ FQ+ +E+IH +Y L++ + + +K+
Sbjct: 119 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 178
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 179 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 238
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L + S ER+ IV EAV IE+EF+ +LP
Sbjct: 239 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 298
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LVGMN LMSQYIEFVAD+LL +G K Y VTNPF +M+ ISL+ KTNFFEKRV EYQ+
Sbjct: 299 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQR 358
Query: 308 ASVMSSLN 315
A VM+S+N
Sbjct: 359 AQVMASIN 366
>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
Length = 413
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/308 (54%), Positives = 218/308 (70%), Gaps = 1/308 (0%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
L NP+RF PI + ++WEMYKK A FWT EE+D +D + WE LT DEK FI +L
Sbjct: 59 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 118
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA+SDGIV+ENL R + Q+ EAR+F+ FQ+ +E+IH +Y L++ + + +K+
Sbjct: 119 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 178
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 179 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 238
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L + S ER+ IV EAV IE+EF+ +LP
Sbjct: 239 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 298
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LVGMN LMSQYIEFVAD+LL +G K Y VTNPF +M+ ISL+ KTNFFEKRV EYQ+
Sbjct: 299 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQR 358
Query: 308 ASVMSSLN 315
A VM+S+N
Sbjct: 359 AQVMASIN 366
>gi|260909050|gb|ACX54162.1| RR2 protein, partial [White spot syndrome virus]
gi|260909052|gb|ACX54163.1| RR2 protein, partial [White spot syndrome virus]
gi|260909054|gb|ACX54164.1| RR2 protein, partial [White spot syndrome virus]
gi|260909056|gb|ACX54165.1| RR2 protein, partial [White spot syndrome virus]
Length = 349
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 167/306 (54%), Positives = 216/306 (70%), Gaps = 1/306 (0%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
L NP+RF PI + ++WEMYKK A FWT EE+D +D + WE LT DEK FI +L
Sbjct: 44 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 103
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA+SDGIV+ENL R + Q+ EAR+F+ FQ+ +E+IH +Y L++ + + +K+
Sbjct: 104 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 163
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 164 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 223
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L + S ER+ IV EAV IE+EF+ +LP
Sbjct: 224 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 283
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LVGMN LMSQYIEFVAD+LL +G K Y VTNPF +M+ ISL+ KTNFFEKRV EYQ+
Sbjct: 284 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQR 343
Query: 308 ASVMSS 313
A VM+S
Sbjct: 344 AQVMAS 349
>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
iridovirus]
Length = 312
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 176/318 (55%), Positives = 225/318 (70%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+R W + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAARFMKEV-QVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+DGIV +NL F KE+ + EARAFYGFQ+AIENIH+EMY+ L+ T + ++ + LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAA-LFS 119
Query: 133 AFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + NK ++ I+ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHEIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N M YI+FVADRLL ALG K+Y V NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVGNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKMDEDF 329
+ N F M+E+F
Sbjct: 300 TP-----SNMEFTMNEEF 312
>gi|27923845|sp|Q9QTF2.1|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
iridovirus]
Length = 312
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/318 (55%), Positives = 226/318 (71%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+R W + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAARFMKEV-QVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+DGIV +NL F KE+ + EARAFYGFQ+AIENIH+EMY+ L+ T + ++ + LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAA-LFS 119
Query: 133 AFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + NK ++ I+ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N M YI+FVADRLL ALG K+Y V+NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKMDEDF 329
+ + F M+E+F
Sbjct: 300 TP-----SSMEFTMNEEF 312
>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
and kidney necrosis virus]
gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
and kidney necrosis virus]
Length = 312
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/318 (55%), Positives = 225/318 (70%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAA 73
D++ + P P +W MYKKA ASFWT EEVDLS D+R W E LT E+ F++H+LAFFA
Sbjct: 2 DKYVLRPSD-PHLWAMYKKAVASFWTVEEVDLSTDVRHWTEKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAARFMKEVQ-VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+DGIV +NL F KE+ + EARAFYGFQ+A+ENIH+EMY+ L+ T + ++ + LF
Sbjct: 61 ADGIVGDNLVCNFAKELDYIPEARAFYGFQVAMENIHAEMYTQLIITLVAKENQAA-LFS 119
Query: 133 AFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + ++ A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKSIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + NK ++ I+ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFQEALKTPLLGM 239
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N M YI+FVADRLL ALG K+Y V NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMRLYIQFVADRLLDALGYAKMYNVANPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKMDEDF 329
+ + F M EDF
Sbjct: 300 TP-----SSMEFTMTEDF 312
>gi|42565480|gb|AAS21007.1| ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis]
Length = 197
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/194 (84%), Positives = 179/194 (92%), Gaps = 4/194 (2%)
Query: 1 MPSIP----EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL 56
MPS+P EEPLL PNPDRFCMFPI+YPEIWEMYKKAEASFWTAEEVDLSQD R WE+L
Sbjct: 1 MPSVPSAVAEEPLLAPNPDRFCMFPIKYPEIWEMYKKAEASFWTAEEVDLSQDTRHWEAL 60
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
TADE+HFITHVLAFFAASDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSEMYSLL
Sbjct: 61 TADERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLL 120
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSF 176
LE+YIK+ DEK+RLF A ET+PCVAKKA+WAL WIDG ++FA+R++AFACVEGIFFSG
Sbjct: 121 LESYIKDPDEKNRLFHAIETIPCVAKKAEWALRWIDGGKSFAQRVVAFACVEGIFFSGVS 180
Query: 177 CAIFWLKKRGLMPG 190
C+IFWLKKRGLMPG
Sbjct: 181 CSIFWLKKRGLMPG 194
>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
iridovirus]
Length = 312
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 219/301 (72%), Gaps = 5/301 (1%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+R W + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAARFMKEV-QVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+DGIV +NL F KE+ + EARAFYGF++A+ENIH+EMY+ L+ T + ++ + LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFRVAMENIHAEMYTQLIITLVAKENQAA-LFS 119
Query: 133 AFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + NK S+E I+ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPSQEDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N M YI+FVADRLL ALG K+Y V NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMRLYIQFVADRLLDALGYAKMYNVANPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 S 312
+
Sbjct: 300 T 300
>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 277
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/284 (61%), Positives = 212/284 (74%), Gaps = 7/284 (2%)
Query: 46 LSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAI 105
++ D + +LT +E+ FI +VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAI
Sbjct: 1 MTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAI 60
Query: 106 ENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFA 165
ENIHSEMYS L+ET I++ +E++ LF A E +P + KKA WA WI +F R +AFA
Sbjct: 61 ENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFA 120
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERV 225
CVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + NK + +
Sbjct: 121 CVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VI 178
Query: 226 KGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDW 285
+ IV+EAV IE+EF+ ++LP +L+GMN LM QYIEFVADRLL ALG K+Y V+NPFD+
Sbjct: 179 EDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDF 238
Query: 286 MELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
ME ISLQGKTNFFE+R YQK V G F ++EDF
Sbjct: 239 MENISLQGKTNFFERREANYQKGYV-----GIDNEFKFNLNEDF 277
>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
Length = 317
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 194/242 (80%), Gaps = 2/242 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEP L NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+DI W + L DE+ FI
Sbjct: 76 EEPRLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A +T+PC+ KKADWA+ WI D + TF++RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFSQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+ I+ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPNAVEAIITEAVTIEQEFLTDA 315
Query: 244 LP 245
LP
Sbjct: 316 LP 317
>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
floridanus]
Length = 343
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 208/276 (75%), Gaps = 19/276 (6%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQ-DIRQWE-SLTADEK 61
PE EPLL P+RF +FPIQYP+IW+MYKKA ASFWT EEV L + D + WE L +DE+
Sbjct: 59 PELEPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEKLNSDER 118
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EV+++EAR FYGFQIAIENIHSEMYSLL+ETYI
Sbjct: 119 YFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYSLLIETYI 178
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+ EK LF A ET+P V KKA+WALNWI+ S TF ER++ AIF
Sbjct: 179 SDPKEKDFLFNAIETLPSVGKKANWALNWINHESATFPERVV---------------AIF 223
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRG+MPGLTFSNELISRDEGLHCDFACL++ + K S ERVK I+ +AVEIE+EF+
Sbjct: 224 WLKKRGVMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSFERVKSIIMDAVEIEQEFL 283
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
ALP L+GMN LM YIEFVADRL ALG KV
Sbjct: 284 TQALPVQLIGMNCTLMCSYIEFVADRLFVALGFEKV 319
>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
Length = 312
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/318 (54%), Positives = 225/318 (70%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+R W + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAARFMKEV-QVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+DGIV +NL F KE+ + EARAFYGFQ+A++NIH+EMY+ L+ T + ++ + LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAMKNIHAEMYTQLIITLVAKENQAA-LFS 119
Query: 133 AFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + NK ++ I+ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHEIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N M YI+FVADRLL ALG K+Y V NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVGNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKMDEDF 329
+ + F M+E+F
Sbjct: 300 TP-----SSMEFTMNEEF 312
>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
Length = 241
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Query: 107 NIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFAC 166
++ +EMYSLL++ Y+K+ EKS LFRA ET+PCV KKADWAL WID S++FAERL+AFAC
Sbjct: 20 SLLAEMYSLLIDQYVKDPAEKSHLFRAIETIPCVKKKADWALKWIDSSDSFAERLLAFAC 79
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVK 226
+EGIFFSGSFC+I+WLKKRGLMPGLTFSNELISRDEGLH DFACLLY +L NK EE V+
Sbjct: 80 IEGIFFSGSFCSIYWLKKRGLMPGLTFSNELISRDEGLHRDFACLLYQMLNNKPDEEVVR 139
Query: 227 GIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWM 286
IV EAVEIE+EFVCD+LPCALVGMN +MS YIE+VAD L +LG K Y NPFDWM
Sbjct: 140 KIVTEAVEIEKEFVCDSLPCALVGMNAGMMSDYIEYVADHLFTSLGMPKEYNTANPFDWM 199
Query: 287 ELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
ELISLQGKTNFFEKRVGEYQKA VM+S+ G N F +DEDF
Sbjct: 200 ELISLQGKTNFFEKRVGEYQKAGVMNSIGGGNAN-AFSLDEDF 241
>gi|397638244|gb|EJK72985.1| hypothetical protein THAOC_05425, partial [Thalassiosira oceanica]
Length = 235
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/234 (70%), Positives = 188/234 (80%), Gaps = 1/234 (0%)
Query: 44 VDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQI 103
+DL++D++ W+ LT +E+HF++H+LAFFAASDGIV ENL F EVQ +EAR FYGFQI
Sbjct: 1 IDLAEDLKDWDGLTNNERHFVSHILAFFAASDGIVNENLCGNFATEVQSAEARCFYGFQI 60
Query: 104 AIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLI 162
A+ENIHSE YSLL++TYIK+ +K L A ETVPCV KKA+WAL W D +FAER I
Sbjct: 61 AVENIHSETYSLLIDTYIKDQADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCI 120
Query: 163 AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE 222
AFA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS L NK+ E
Sbjct: 121 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPE 180
Query: 223 ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
R+ IV AVEIE+EFV DALP L+GMN LM QYIEF ADRLL ALGC KV
Sbjct: 181 SRIVEIVTHAVEIEKEFVVDALPVELIGMNSGLMCQYIEFCADRLLHALGCSKV 234
>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
[Arabidopsis thaliana]
Length = 243
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/193 (83%), Positives = 177/193 (91%), Gaps = 3/193 (1%)
Query: 140 VAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 199
V KKA+WA+ WI+GS++FAER++AFACVEGIFFSGSFC+IFWLKKRGLMPGLTFSNELIS
Sbjct: 51 VTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELIS 110
Query: 200 RDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQY 259
RDEGLHCDFACL+YSLLR K E+R+K IV +AVEIEREFVCDAL CALVGMN LMSQY
Sbjct: 111 RDEGLHCDFACLIYSLLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQY 170
Query: 260 IEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGG 319
IEFVADRLL ALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSS++GN
Sbjct: 171 IEFVADRLLAALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSVHGNAA 230
Query: 320 ---NHVFKMDEDF 329
+HVFK+DEDF
Sbjct: 231 FNDDHVFKLDEDF 243
>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
Length = 310
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 210/294 (71%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ LT EKHFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI + +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA+W + WI +T A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKTLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G G ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFTPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
Length = 374
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/332 (54%), Positives = 230/332 (69%), Gaps = 14/332 (4%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP+RF +FP++Y +IW YKKA ASFWT EEVDL++D+ WE +T +E+ FI+
Sbjct: 49 EEPLLRENPNRFVIFPLKYHDIWAFYKKAVASFWTVEEVDLAKDMADWEKMTDNERFFIS 108
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLAFFAASDGIV ENL RF KEVQV EAR FYG QIAIENIHSEMYS L+ETYI++
Sbjct: 109 RVLAFFAASDGIVNENLVERFSKEVQVPEARFFYGSQIAIENIHSEMYSKLIETYIRDEK 168
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET----FAERLIAFACVEGIFFSGSFCAIFW 181
E++ LF A VPC+AKKA+WA+ G +T FAER+IAFA V G FS AI +
Sbjct: 169 ERNILFNAIFEVPCIAKKAEWAVKM--GLQTITAPFAERVIAFAAVGGNIFSLGPVAIPF 226
Query: 182 --LKKRGLMPGLTFS--NELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIER 237
LKK+G G + S LI DEG+H ++NKLS+ER+ I+++AV IE+
Sbjct: 227 SGLKKKGDWRGWSHSILRSLIQGDEGVHAISHVCCIQHIKNKLSQERIYYIIRDAVAIEQ 286
Query: 238 EFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNF 297
EF+ ++LP ++GMN LM QYIE+VAD LL LGC K+ NPFD+ME IS+ GKTNF
Sbjct: 287 EFLSESLPVDMIGMNCRLMCQYIEYVADHLLVELGCEKICKSKNPFDFMENISIDGKTNF 346
Query: 298 FEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
FEK+V EYQ+ V+S+ F++D DF
Sbjct: 347 FEKKVSEYQRPGVLST----EKERQFQLDADF 374
>gi|389613574|dbj|BAM20123.1| ribonucleoside diphosphate reductase small subunit [Papilio xuthus]
Length = 284
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/223 (71%), Positives = 183/223 (82%), Gaps = 2/223 (0%)
Query: 5 PE-EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
PE EPLL NP RF +FPIQYP+IW+MYKKAEASFWT EEVDLS+D+ WESL E+HF
Sbjct: 54 PELEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWESLKDCERHF 113
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQIA+EN+HSEMYSLL++TYI++
Sbjct: 114 IKHVLAFFAASDGIVNENLVERFSQEVQIGEARFFYGFQIAMENVHSEMYSLLIDTYIRD 173
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LF A ET+PCV KKADWAL WI + F ER++AFA VEGIFFSGSF +IFWL
Sbjct: 174 PKERDFLFNAVETLPCVKKKADWALQWIASKTANFGERIVAFAAVEGIFFSGSFASIFWL 233
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERV 225
KKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV
Sbjct: 234 KKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSKERV 276
>gi|350532636|ref|ZP_08911577.1| Ribonucleoside-diphosphate reductase [Vibrio rotiferianus DAT722]
gi|424032641|ref|ZP_17772058.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-01]
gi|424037729|ref|ZP_17776454.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-02]
gi|408875699|gb|EKM14843.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-01]
gi|408895210|gb|EKM31674.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-02]
Length = 310
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 209/294 (71%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ LT EKHFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI + +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA+W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G G ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFNPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|424046200|ref|ZP_17783763.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-03]
gi|408885457|gb|EKM24174.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-03]
Length = 310
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 209/294 (71%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ LT EKHFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI + +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA+W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVAQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G G ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFNPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|444425042|ref|ZP_21220490.1| ribonucleotide reductase small subunit [Vibrio campbellii CAIM 519
= NBRC 15631]
gi|444241652|gb|ELU53173.1| ribonucleotide reductase small subunit [Vibrio campbellii CAIM 519
= NBRC 15631]
Length = 310
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 209/294 (71%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ LT EKHFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI + +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA+W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G G ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFTPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|375073645|gb|AFA34381.1| ribonucleotide diphosphate reductase, partial [Ostrea edulis]
Length = 233
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/233 (68%), Positives = 187/233 (80%), Gaps = 6/233 (2%)
Query: 103 IAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLI 162
IA+ENIHSEMYSLL++TYI + EKSRL R ET+P V KKA+WA+ W++ S+ +AERL+
Sbjct: 1 IAMENIHSEMYSLLIDTYISDEVEKSRLLRGIETIPSVGKKANWAIKWMESSDVYAERLV 60
Query: 163 AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE 222
AF+ VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY L KLS+
Sbjct: 61 AFSAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKHLETKLSQ 120
Query: 223 ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNP 282
E++ I+ AVEIE+EFV ++LP L+GMN LM+QYIEFVADRLL LGC ++Y NP
Sbjct: 121 EKIYEIIGGAVEIEKEFVTESLPVDLIGMNSKLMAQYIEFVADRLLLELGCDRLYNAKNP 180
Query: 283 FDWMELISLQGKTNFFEKRVGEYQKASVMSSL-NGNGGN-----HVFKMDEDF 329
F WMELISL GKTNFFEKRVGEYQKA+VM S+ NGN N F +D DF
Sbjct: 181 FSWMELISLDGKTNFFEKRVGEYQKANVMKSVGNGNSTNSKNYEKKFNLDADF 233
>gi|193206379|ref|NP_500944.2| Protein F58F9.1 [Caenorhabditis elegans]
gi|373254185|emb|CCD67640.1| Protein F58F9.1 [Caenorhabditis elegans]
Length = 581
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 207/293 (70%), Gaps = 19/293 (6%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL PN +RF + PI + +IWE YKKA A FWT+EEVDL +D+ WE LT+DE+ FI+
Sbjct: 307 EPLLAPNNNRFVVHPIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFISS 366
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENL +RF EVQV+EAR FYGFQIA+ENIHSEMY+ LLE YI++ E
Sbjct: 367 ILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAE 426
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF A T + KADW L WI D + F+ERL A A VEGIFFS SF AIFWLKKR
Sbjct: 427 RNILFNAITTFKFIKAKADWCLRWISDHNAPFSERLAAVAAVEGIFFSSSFAAIFWLKKR 486
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GL+PGLT SNELISR K +E R+ I+ E+V +E++FV ++LP
Sbjct: 487 GLLPGLTHSNELISR------------------KPAESRITEIINESVLVEQDFVRESLP 528
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF 298
L+GMN +M +Y+EFVAD LL LG K Y N FD+ME IS++GKTNFF
Sbjct: 529 TNLIGMNQHMMCKYVEFVADLLLEELGYSKRYNTKNLFDFMENISIEGKTNFF 581
>gi|56555145|gb|AAV98100.1| RR2 protein [White spot syndrome virus]
Length = 328
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 206/294 (70%), Gaps = 1/294 (0%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
L NP+RF PI + ++WEMYKK A FWT EE+D +D + WE LT DEK FI +L
Sbjct: 35 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 94
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA+SDGIV+ENL R + Q+ EAR+F+ FQ+ +E+IH +Y L++ + + +K+
Sbjct: 95 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 154
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 155 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 214
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L + S ER+ IV EAV IE+EF+ +LP
Sbjct: 215 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 274
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
LVGMN LMSQYIEFVAD+LL +G K Y VTNPF +M+ ISL+ KTNFFEKR
Sbjct: 275 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKR 328
>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-A]
Length = 313
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 212/294 (72%), Gaps = 3/294 (1%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFITHVLAFFAAS 74
R ++PI + +++E YK+AEA FW EEVDLS+D ++ L D++HFI HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ ++ V EA FY FQ A+EN+H++MY L+ I + + + AF
Sbjct: 65 DSIVNINVLNYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIIELIPDKKHQDLILNAF 124
Query: 135 ETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
+ VPCV KK DWAL WI+ + TFAERL+AFA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNVPCVRKKDDWALKWIENDKATFAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEG+H DFACL Y+ ++ KLS E++ + KEAV+IE+EF DALP +L+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+M +YIEFVADRLL LG K Y NPF +M ISL+GKTNFFE+RVGEY+
Sbjct: 245 ATMMCEYIEFVADRLLMQLGQPKYYNARNPFSFMNNISLEGKTNFFERRVGEYK 298
>gi|343495113|ref|ZP_08733308.1| Ribonucleoside-diphosphate reductase [Vibrio nigripulchritudo ATCC
27043]
gi|342823810|gb|EGU58402.1| Ribonucleoside-diphosphate reductase [Vibrio nigripulchritudo ATCC
27043]
Length = 310
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 208/294 (70%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ + LT E+HFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPDLQKLTEGEQHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI + +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
+ VP V +KA W + WI + RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 DNVPTVKRKAQWVMKWISSDKPLPMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K+++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQAEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G G KV+G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 DLMCQYIEHTADVIAGLFGFDKVFGSENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|403270691|ref|XP_003927300.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 213/322 (66%), Gaps = 48/322 (14%)
Query: 8 PLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHV 67
PLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DIR WESL +E++F++HV
Sbjct: 71 PLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIRHWESLKPEERYFVSHV 130
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
LAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+ +E
Sbjct: 131 LAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPNES 190
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
E P V+ F S S + L K
Sbjct: 191 -------EEKPVVSHLP--------------------------FESSSALNMSMLDK--- 214
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCA 247
E +D+GLHCDFACL++ L +K SEERV+ I+ AV IE+EF+ +ALP
Sbjct: 215 --------ENAEKDKGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVK 266
Query: 248 LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+
Sbjct: 267 LIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQR 326
Query: 308 ASVMSSLNGNGGNHVFKMDEDF 329
VMSS N F +D DF
Sbjct: 327 MGVMSSPTENS----FTLDADF 344
>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
Length = 310
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 206/294 (70%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ LT EKHFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPDLVKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI + +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVQRKAQWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G +G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIADLFGFNPAFGSENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|390165255|gb|AFL64902.1| rr2b [Mamestra brassicae MNPV]
gi|401665659|gb|AFP95771.1| ribonucleotide reductase small subunit [Mamestra brassicae MNPV]
Length = 313
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 209/294 (71%), Gaps = 3/294 (1%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFITHVLAFFAAS 74
R ++PI + +++E YK+AEA FW EEVDLS+D ++ L D++HFI HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ ++ V EA FY FQ A+EN+H++MY L+ T I + ++ + AF
Sbjct: 65 DSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAF 124
Query: 135 ETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
+ +PCV KK DWAL W + T AERL+AFA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNIPCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSLLRN-KLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEG+H DFACL Y+ N KLS E + + KEAV+IE+EF DALP AL+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+M +YIEFVADRLL LG K Y NPF +M ISL+GKTNFFE+RVGEY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYNARNPFPFMNNISLEGKTNFFERRVGEYK 298
>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712, partial [Chlorella
variabilis]
Length = 214
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 179/214 (83%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L N +RFC+ P++Y +E YK+A+AS+WTAEEVDLSQD+R W LT DE+HF++
Sbjct: 1 KEPILQANNERFCLLPVKYDRCFEYYKQAQASYWTAEEVDLSQDMRDWRKLTDDERHFVS 60
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIVLENL+ RFM+EVQ+ EARAFY FQ AIE +HSEMY LLLE YI++ D
Sbjct: 61 YVLAFFAASDGIVLENLSTRFMQEVQIPEARAFYAFQSAIEAVHSEMYGLLLEQYIRDPD 120
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ LF A +T+PCV KKA WA+ WI+ S FAERL+A+ACVEGI FSGSFC+IFWLKKR
Sbjct: 121 ERDLLFHAVDTIPCVQKKAQWAMKWIESSSCFAERLVAYACVEGIHFSGSFCSIFWLKKR 180
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNK 219
LMPGLTFSNE+ISRDEGLH DFAC LY LL+N+
Sbjct: 181 QLMPGLTFSNEMISRDEGLHTDFACHLYELLQNR 214
>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 310
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 205/294 (69%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
++F +FPIQY EIW+ YK EA+FWT EE+D +QD+ LT EKHFI HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
+G++ ENL RF E++++EAR F Q E IH+E Y+L LETYI +E+ RLF A
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPAVEERERLFNAI 124
Query: 135 ETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA+W + WI + RLIAF VEG+FF+GSFCAI++ +KR L+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLTMRLIAFGLVEGLFFAGSFCAIYYFRKRSLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + I +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
LM QYIE AD + G G ++ NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFDPIFYAKNPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
Length = 313
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/295 (55%), Positives = 208/295 (70%), Gaps = 3/295 (1%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
R +FPIQ+ ++W YK+A W EEVDLS+D + S L DE++FI HVLAFFAA+
Sbjct: 5 RKVLFPIQHNDLWRAYKQALDCMWKVEEVDLSKDCDDFTSKLNDDERYFIKHVLAFFAAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV NL + V EA+ FY Q+ IE +H+EMY+LL+ I + E+ L AF
Sbjct: 65 DSIVNINLIEYMQQNVPELEAQYFYNQQVLIECVHTEMYNLLIHQLISDEHERDTLLNAF 124
Query: 135 ETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E +PCV KK DWA+ WI+ S TFAER++AFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ERMPCVRKKTDWAMKWINSSTATFAERMVAFAIVEGVFFSGSFAAIFYIKTKGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH DFACL Y+ + +KL+ + V + KEAV IE+EF ALP AL+GMN
Sbjct: 185 SNELISRDEGLHTDFACLYYNTRVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
M YIEFVADRLL L K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 AQSMCDYIEFVADRLLVQLHQPKHFHARNPFEFMNNISLEGKTNFFEKRVGEYKR 299
>gi|22549454|ref|NP_689227.1| rr2b gene product [Mamestra configurata NPV-B]
gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-B]
Length = 313
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 208/294 (70%), Gaps = 3/294 (1%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFITHVLAFFAAS 74
R ++PI + +++E YK+AEA FW EEVDLS+D ++ L D++HFI HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ ++ V EA FY FQ A+EN+H++MY L+ T I + ++ + AF
Sbjct: 65 DSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAF 124
Query: 135 ETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
+ + CV KK DWAL W + T AERL+AFA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNISCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSLLRN-KLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEG+H DFACL Y+ N KLS E + + KEAV+IE+EF DALP AL+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+M +YIEFVADRLL LG K Y NPF +M ISL+GKTNFFE+RVGEY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYNARNPFPFMNNISLEGKTNFFERRVGEYK 298
>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
nucleopolyhedrovirus]
Length = 313
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/295 (55%), Positives = 207/295 (70%), Gaps = 3/295 (1%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
R + PI + ++W YK+A W EEVD+S+D +ES L DE++FI HVLAFFAA+
Sbjct: 5 RKVLKPILHDDLWAAYKQAFDCMWKVEEVDMSRDYDDFESKLNDDERYFIKHVLAFFAAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV NL + V EA+ FY Q+ IE +H+EMY+LL+E IK+ E+ L AF
Sbjct: 65 DSIVNINLIEYMQRNVPELEAQYFYNLQVLIECVHTEMYNLLIEQLIKDEHERDTLLNAF 124
Query: 135 ETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E VPCV KKA WA+ WI+ + T AER++AFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 EHVPCVRKKAQWAMKWIESDTATLAERMVAFAIVEGVFFSGSFAAIFYIKTKGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH DFACL Y + + KL + + + KEAV IE+EF ALP L+GMN
Sbjct: 185 SNELISRDEGLHTDFACLYYKTRVTEKLDSDTILSMFKEAVAIEKEFFTAALPVELLGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
M +YIEFVADRLL LG K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 AQSMCEYIEFVADRLLVQLGQPKYFNARNPFEFMNNISLEGKTNFFEKRVGEYKR 299
>gi|448825572|ref|YP_007418503.1| ribonucleoside-diphosphate reductase small chain [Megavirus lba]
gi|444236757|gb|AGD92527.1| ribonucleoside-diphosphate reductase small chain [Megavirus lba]
Length = 406
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 209/306 (68%), Gaps = 2/306 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L+ +R+ ++PI Y ++W+ YK + W EEVDLS+D++ W L+ +++ FI H
Sbjct: 89 EPVLSSTNERYTVYPIIYNQVWKNYKDQLKNNWVVEEVDLSKDVQHWNKLSENDRIFIMH 148
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++K+
Sbjct: 149 VLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDIL 208
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR- 185
K L A +T+P + KKADW WI +T+A +L AFA VEG+FFSGSF +IFWLK R
Sbjct: 209 KKNLIEAIKTMPSIKKKADWCQKWIKSDKTYAHKLAAFAVVEGVFFSGSFASIFWLKTRK 268
Query: 186 -GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+MPGL SN+ I+RDE H + AC++YSLL+NKL E + I++EA++IE EF+ +L
Sbjct: 269 GSVMPGLIKSNKFIARDENKHVELACIMYSLLKNKLKESVIHEIIQEAIDIEDEFINCSL 328
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN +LMSQYI++VADRLL LG K Y NPF++M+ I + K NFFE+R
Sbjct: 329 PCRLLGMNSSLMSQYIKYVADRLLVGLGYKKKYFAENPFEYMKKIDVFTKANFFEERNDA 388
Query: 305 YQKASV 310
Y + +
Sbjct: 389 YADSKI 394
>gi|363540639|ref|YP_004894645.1| mg594 gene product [Megavirus chiliensis]
gi|350611804|gb|AEQ33248.1| ribonucleoside-diphosphate reductase small chain [Megavirus
chiliensis]
gi|371943945|gb|AEX61773.1| ribonucleoside-diphosphate reductase small chain [Megavirus
courdo7]
gi|425701506|gb|AFX92668.1| ribonucleoside-diphosphate reductase small chain [Megavirus
courdo11]
Length = 406
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 209/306 (68%), Gaps = 2/306 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L+ +R+ ++PI Y ++W+ YK + W EEVDLS+D++ W L+ +++ FI H
Sbjct: 89 EPVLSSTNERYTVYPIIYNQVWKNYKDQLKNNWVVEEVDLSKDVQHWNKLSENDRIFIMH 148
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++K+
Sbjct: 149 VLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDIL 208
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR- 185
K L A +T+P + KKADW WI +T+A +L AFA VEG+FFSGSF +IFWLK R
Sbjct: 209 KKNLIEAIKTMPSIKKKADWCQKWIKSDKTYAHKLAAFAVVEGVFFSGSFASIFWLKTRK 268
Query: 186 -GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+MPGL SN+ I+RDE H + AC++YSLL+NKL E + I++EA++IE EF+ +L
Sbjct: 269 GSVMPGLIKSNKFIARDENKHVELACIMYSLLKNKLKESVIHEIIQEAIDIEDEFINCSL 328
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN +LMSQYI++VADRLL LG K Y NPF++M+ I + K NFFE+R
Sbjct: 329 PCRLLGMNSSLMSQYIKYVADRLLVGLGYKKKYFAENPFEYMKKIDVFTKANFFEERNDA 388
Query: 305 YQKASV 310
Y + +
Sbjct: 389 YADSKI 394
>gi|406707526|ref|YP_006757878.1| ribonucleotide reductase small subunit [alpha proteobacterium
HIMB59]
gi|406653302|gb|AFS48701.1| Ribonucleotide reductase, small chain [alpha proteobacterium
HIMB59]
Length = 329
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/312 (48%), Positives = 205/312 (65%), Gaps = 20/312 (6%)
Query: 18 CMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGI 77
+FPIQ+ EIW+ YK+ +FWT EEV L D+R ++L EKHFI HVLAFFA S+ +
Sbjct: 8 SIFPIQHQEIWDRYKQHVQAFWTPEEVSLQDDLRDLKTLNEGEKHFIKHVLAFFANSEAM 67
Query: 78 VLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETV 137
+ ENLA+RF E+ + E+R F Q+ E+IH+EMY L +E Y+++ EK +LF A + V
Sbjct: 68 INENLASRFYNEILIPESRLFITMQMLNESIHAEMYGLQIEAYVEDPAEKDKLFSAIQNV 127
Query: 138 PCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 197
PC+ KKA W W++G + RLIAF VEG+FF+GSFCAI++ +KRGL+PGL SN+
Sbjct: 128 PCINKKAQWVSKWLNGKQNLLTRLIAFGLVEGLFFAGSFCAIYYFRKRGLLPGLALSNDW 187
Query: 198 ISRDEGLHCDFACLLYSLLRNK-----LSEERVKG---------------IVKEAVEIER 237
I+RDEG+H F+ L++ L NK LS+E +K IV+EAVE E+
Sbjct: 188 IARDEGMHFSFSALMFKTLSNKFNNGTLSDEDIKSMDLIPNLVSQSEFEEIVREAVEFEK 247
Query: 238 EFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNF 297
EFV DALP L+GMN +M YIE V+DR+ G VYG NPFD+M + +Q TNF
Sbjct: 248 EFVTDALPVDLIGMNKEMMCMYIEAVSDRIADLFGFEHVYGTENPFDFMRALDVQNVTNF 307
Query: 298 FEKRVGEYQKAS 309
FEKRV EYQ+ +
Sbjct: 308 FEKRVSEYQRPT 319
>gi|441432445|ref|YP_007354487.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383525|gb|AGC02051.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 401
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 210/310 (67%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL-TADEKH 62
I EP+L+ +R+ ++PIQY +W+ YK W EEVDLS+D+ W +L + +++
Sbjct: 79 IVPEPILSTASERYTVYPIQYNNVWKNYKDQLKINWVVEEVDLSKDVSDWNNLLSENDRI 138
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++K
Sbjct: 139 FIMHVLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVK 198
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ K +L +A +T+P + KKADW WI +T+A +L+AFA VEG+FFSGSF +IFWL
Sbjct: 199 DDILKDKLIKAIKTMPSIKKKADWCKKWIKSDKTYAHKLVAFAIVEGVFFSGSFASIFWL 258
Query: 183 KKR--GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
K R +MPGL SN+ I+RDE H + A +L+SLL+N+L E V I+ EA++IE EF+
Sbjct: 259 KTRQGNVMPGLIKSNKFIARDENKHVELASILFSLLKNRLKESVVHEIIDEAIQIEDEFI 318
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN LMSQYI++VADRLL LG K Y NPF++M+ I + K NFFE+
Sbjct: 319 NDSLPCRLLGMNSQLMSQYIKYVADRLLVQLGYKKKYFADNPFEYMKKIDVFVKANFFEE 378
Query: 301 RVGEYQKASV 310
R Y A +
Sbjct: 379 RNDAYSDAKI 388
>gi|451927338|gb|AGF85216.1| reductase small subunit [Moumouvirus goulette]
Length = 398
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 210/310 (67%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD-EKH 62
I EP+L+ +R+ ++PI Y +W+ YK W EEVDLS+D+ W +L +D ++
Sbjct: 76 IITEPILSTASERYTVYPIVYNNVWKNYKDQLKINWVVEEVDLSKDVSDWNNLLSDNDRL 135
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++K
Sbjct: 136 FIMHVLAFFASADGIVNANIKENLIDIVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVK 195
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ K +L +A +T+P + KKA+W WI +T+A +L+AFA VEG+FFSGSF +IFWL
Sbjct: 196 DDILKDKLIKAIKTMPSIKKKAEWCKKWIKSDKTYAHKLVAFATVEGVFFSGSFASIFWL 255
Query: 183 KKR--GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
K R +MPGL SN+ I+RDE H + A +L+SLL+NKL E V I+ EA++IE EF+
Sbjct: 256 KTRQGNVMPGLIKSNKFIARDENKHVELASILFSLLKNKLKESVVYEIIDEAIQIEDEFI 315
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN LMSQYI++VADRLL LG K Y V NPF++M+ I + K NFFE+
Sbjct: 316 NDSLPCRLLGMNSELMSQYIKYVADRLLVQLGYKKKYFVENPFEYMKKIDVFVKANFFEE 375
Query: 301 RVGEYQKASV 310
R Y A +
Sbjct: 376 RNDAYSDAKI 385
>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
Length = 313
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/295 (53%), Positives = 209/295 (70%), Gaps = 3/295 (1%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
R +FPIQ+ ++W YK+A W EEVDLS+D + + LT +E++FI +LAFFAA+
Sbjct: 5 RKVLFPIQHIDLWTAYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFAAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ + V EA+ FY Q+ IE IH+EMY+LL+ IK+ ++++ L F
Sbjct: 65 DSIVNINIIEHMQRTVPELEAQYFYNQQVLIECIHTEMYNLLIHALIKDEEKQATLLNGF 124
Query: 135 ETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E++PCV +KA+WA+ +I+ T AERLIAFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ESMPCVRRKAEWAMKYIENENVTLAERLIAFAIVEGVFFSGSFAAIFYMKTKGVMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH +FACL Y+ + KL V + EAV IE EF +ALP +LVGMN
Sbjct: 185 SNELISRDEGLHTNFACLYYNTRVDQKLDVPTVSDMFAEAVAIEMEFFAEALPESLVGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQK 307
+M +YIEFVADRLL L K+Y NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 AEMMRKYIEFVADRLLVQLKYPKIYHTENPFEFMNNISLEGKTNFFEKRVGEYKR 299
>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
Length = 419
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 207/302 (68%), Gaps = 5/302 (1%)
Query: 15 DRFCMF----PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAF 70
DRF +F +Y +++++YKK A FW EE+DLS D + WE ++DEKHF+ VLAF
Sbjct: 104 DRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAF 163
Query: 71 FAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRL 130
FA+ D IV+EN+ F E+ + + R + Q A E +H E YSLL++TY ++++E+ +
Sbjct: 164 FASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHV 223
Query: 131 FRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMP 189
R+ +T+P + KKA WA W++ + + AERL+ F C+EG+ FSGSFCAI+WLKKR
Sbjct: 224 MRSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFK 283
Query: 190 GLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALV 249
GL+F+N LI+RDEGLH + L+Y L+N+L ERV I K AV +E EF+ ALP AL+
Sbjct: 284 GLSFANSLIARDEGLHATASVLIYKHLKNRLPRERVHEIFKHAVSVECEFISSALPVALI 343
Query: 250 GMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKAS 309
G++ M++YI+FVAD L LG KVY NPF+WM++ISLQGKTNFFE RV EY K
Sbjct: 344 GISEKSMTEYIKFVADYWLNQLGYDKVYNCANPFEWMDMISLQGKTNFFENRVAEYSKPG 403
Query: 310 VM 311
V+
Sbjct: 404 VL 405
>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
Length = 342
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/314 (45%), Positives = 218/314 (69%), Gaps = 7/314 (2%)
Query: 7 EPLLTPNP--DRFCMF----PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
EP+ + DRF +F +Y +++ +YKK A FWT EE+DLS+D+ W+ ++DE
Sbjct: 17 EPMCHEDSEFDRFILFNQKSEFEYADVYALYKKEIACFWTVEEMDLSEDVECWDKSSSDE 76
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFI H+LAFFA+ D IV+EN++ F E+ + + R+ + Q AIE+IH E YS+L++TY
Sbjct: 77 QHFIIHILAFFASLDQIVMENVSVNFGDEIVIPQVRSHFAIQNAIESIHGEAYSILIQTY 136
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAI 179
+KNS ++S++ R+ + +P + KKA W +W+D + AERL+AF CVEG+ FSG+FCAI
Sbjct: 137 VKNSQQQSKILRSVQEMPIIRKKAQWVTSWMDPETCSLAERLVAFTCVEGVQFSGAFCAI 196
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
+WLKK+G GL F+N LI+RDEGLH + + ++Y+ L+++L V I +A IE+EF
Sbjct: 197 YWLKKQGRFRGLCFANSLIARDEGLHAEGSVMIYNHLKHRLPVAVVHDIFGQATTIEKEF 256
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALP +L+G+N MS YIE+++D L LG K++ NPF+WM +I ++GK+NFFE
Sbjct: 257 IREALPVSLIGINAGTMSTYIEYISDFWLEKLGYPKLFNSKNPFEWMTMIGMEGKSNFFE 316
Query: 300 KRVGEYQKASVMSS 313
RV EY KA M+S
Sbjct: 317 GRVAEYSKAGSMTS 330
>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
Length = 313
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/317 (51%), Positives = 214/317 (67%), Gaps = 11/317 (3%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
R +FPIQ+ ++W YK+A W EEVDLS+D + + LT +E++FI +LAFFAA+
Sbjct: 5 RKVLFPIQHIDLWASYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFAAA 64
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ + V EA+ FY Q+ I+ IH+EMY+LL+ IK+ ++ L F
Sbjct: 65 DSIVNINIIEHMQRTVPELEAQYFYNQQVLIQCIHTEMYNLLIHALIKDEKKQEMLLNGF 124
Query: 135 ETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E +PCV +KA+WA+ +ID + T AERL+AFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ENMPCVRRKAEWAMKYIDDEKITLAERLVAFAIVEGVFFSGSFAAIFYMKTKGVMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH +FACL Y+ + KL V + EAV IE EF +ALP +LVGMN
Sbjct: 185 SNELISRDEGLHTNFACLYYNTRVDQKLDAPTVNDMFSEAVAIEMEFFAEALPESLVGMN 244
Query: 253 GALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMS 312
+M +YIEFVADRLL L K+Y NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 ANMMRKYIEFVADRLLVQLKYPKMYYTENPFEFMNNISLEGKTNFFEKRVGEYKRFG--- 301
Query: 313 SLNGNGGNHVFKMDEDF 329
G F++ EDF
Sbjct: 302 -----AGEDKFQLLEDF 313
>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
Length = 419
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 208/302 (68%), Gaps = 5/302 (1%)
Query: 15 DRFCMF----PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAF 70
DRF +F +Y +++++YKK A FW EE+D+S D + W+ ++DEKHF+ VLAF
Sbjct: 104 DRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDMSGDSKDWDDASSDEKHFLKLVLAF 163
Query: 71 FAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRL 130
FA+ D IV+EN+ F E+ + + R + Q A E +H E YSLL++TY ++++E+ +
Sbjct: 164 FASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHV 223
Query: 131 FRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMP 189
R+ +T+P + KKA WA W++ + + AERL+ F C+EG+ FSGSFCAI+WLKKR
Sbjct: 224 MRSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFK 283
Query: 190 GLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALV 249
GL+F+N LI+RDEGLH + L+Y LRNKL +ERV I + AV +E EF+ ALP AL+
Sbjct: 284 GLSFANSLIARDEGLHATASVLIYKHLRNKLPQERVHEIFEHAVSVECEFISSALPVALI 343
Query: 250 GMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKAS 309
G++ M++YI+FVAD L LG KVY NPF+WM++ISLQGKTNFFE RV EY K
Sbjct: 344 GISEKSMTEYIKFVADYWLNQLGYDKVYNCANPFEWMDMISLQGKTNFFENRVAEYSKPG 403
Query: 310 VM 311
V+
Sbjct: 404 VL 405
>gi|351737466|gb|AEQ60501.1| ribonucleotide reductase small subunit [Acanthamoeba castellanii
mamavirus]
gi|398257152|gb|EJN40760.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 417
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
I +EP+L+ +++ + PI+Y ++W+ YK ++WT EEVDL++D+ W + L+ D+++
Sbjct: 96 IMKEPILSLTSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRN 155
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL+L T++K
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ +++L + +T+P + KKADW WI +T+A +L+AF+ VEG+FFSGSF +IFWL
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWL 275
Query: 183 KKRGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
K R + MPGL SN+ I+RDE H + AC++YSLL N+L E V I+ EA+EIE EF+
Sbjct: 276 KTREMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFI 335
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN LMSQYI++VADRLL LG K + V NPF++M+ I + K NFFEK
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEK 395
Query: 301 RVGEYQKASV 310
R Y A++
Sbjct: 396 RNDAYSNANI 405
>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
Length = 213
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 174/213 (81%)
Query: 23 QYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENL 82
Q+ ++WEMYKK EASFWTAEE+DLS+D WESLT+ E+HFI HVLAFFAASDGIVLENL
Sbjct: 1 QHADLWEMYKKHEASFWTAEEIDLSKDNVDWESLTSSEQHFIKHVLAFFAASDGIVLENL 60
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
A +F E+QV EARAFYGFQIA+ENIHSE YSLL+E YIK EK+ + A ET+P VA+
Sbjct: 61 AGQFACEIQVPEARAFYGFQIAMENIHSETYSLLIEQYIKEPQEKADILNAIETMPAVAE 120
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WA+ W+ +F ERL+AFA VEGI FSGSFCAI+WLKKRGLMPGLTFSNELISRDE
Sbjct: 121 KAKWAVQWMQRENSFTERLVAFAAVEGILFSGSFCAIYWLKKRGLMPGLTFSNELISRDE 180
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
GLH DFACL+Y L+N L E+ V I++ AVE+
Sbjct: 181 GLHADFACLIYRKLQNHLPEDVVHSIMRGAVEV 213
>gi|388522397|gb|AFK49260.1| unknown [Lotus japonicus]
Length = 218
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 142/187 (75%), Positives = 165/187 (88%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L RFCMFPI+Y ++WEMYKKA ASFWTAEEVDL+ D++ W +L+ EKHFIT
Sbjct: 28 QEPILMEQTQRFCMFPIRYKQVWEMYKKAPASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLAARF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLET IK+S
Sbjct: 88 HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A E +PCVA+KA+WALNWI+ S +FAERL+AFAC+EGIFFSGSFC+IFWLKKR
Sbjct: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEGIFFSGSFCSIFWLKKR 207
Query: 186 GLMPGLT 192
GLMPGLT
Sbjct: 208 GLMPGLT 214
>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|77416594|sp|Q7T6Y9.2|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|339061248|gb|AEJ34552.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
Length = 417
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
I +EP+L+ +++ + PI+Y ++W+ YK ++WT EEVDL++D+ W + L+ D+++
Sbjct: 96 IMKEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRN 155
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL+L T++K
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ +++L + +T+P + KKADW WI +T+A +L+AF+ VEG+FFSGSF +IFWL
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWL 275
Query: 183 KKRGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
K R + MPGL SN+ I+RDE H + AC++YSLL N+L E V I+ EA+EIE EF+
Sbjct: 276 KTREMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFI 335
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN LMSQYI++VADRLL LG K + V NPF++M+ I + K NFFEK
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEK 395
Query: 301 RVGEYQKASV 310
R Y A++
Sbjct: 396 RNDAYSNANI 405
>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 238
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/238 (64%), Positives = 185/238 (77%), Gaps = 13/238 (5%)
Query: 105 IENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAF 164
+ENIHSE YSLL++ YIK+ EK ++FRA ETVP V KKA+WAL+WI+ F+ERLIAF
Sbjct: 1 MENIHSETYSLLIDNYIKDPAEKDKIFRAIETVPSVRKKAEWALSWINDDNCFSERLIAF 60
Query: 165 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-NKLSEE 223
ACVEGI FSGSFCAI+WLKKRGLMPGLTFSNELISRDEGLH DFACLLY+++ +L +E
Sbjct: 61 ACVEGILFSGSFCAIYWLKKRGLMPGLTFSNELISRDEGLHADFACLLYNMMHYTRLPDE 120
Query: 224 RVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPF 283
RV IV+ AV++ER F+ ++LP +L+GMN LM +YIEFVADRLL ALG K+Y TNPF
Sbjct: 121 RVHEIVRGAVDVERVFISESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNATNPF 180
Query: 284 DWMELISLQGKTNFFEKRVGEYQKASVM--SSLNGNGGNHV----------FKMDEDF 329
DWM++ISLQGKTNFFEKRVGEYQK VM ++ + NG F +DEDF
Sbjct: 181 DWMKMISLQGKTNFFEKRVGEYQKGGVMAGTAAHKNGSMDAEERRKSIGADFALDEDF 238
>gi|403182337|gb|EJY57322.1| AAEL017375-PA [Aedes aegypti]
Length = 373
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/288 (55%), Positives = 200/288 (69%), Gaps = 28/288 (9%)
Query: 42 EEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGF 101
+EVDLS+D+ WE L + EKHFI+HVLAFF ASDG + ENL RF +E+QV+EAR FYGF
Sbjct: 114 KEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGF 173
Query: 102 QIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERL 161
Q+A+EN+HSEMYSLL++TYI++S ++ KKA+ F ER+
Sbjct: 174 QMAMENVHSEMYSLLIDTYIRDSKQRD-------------KKAN-----------FGERV 209
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS 221
+AFA VE IFFSGSF +I WLKKRGL PGLTFS ELISRDEGLH +F L++ L K S
Sbjct: 210 VAFAVVEEIFFSGSFASINWLKKRGLTPGLTFSYELISRDEGLHMEFVSLMFKYLVQKPS 269
Query: 222 EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTN 281
+E V ++E V I++EF+ LP L+GMN L+SQYIEFVAD LL L K+Y N
Sbjct: 270 QEHVIEFIRETVLIKQEFLTKTLPVDLLGMNCDLLSQYIEFVADGLLLELVIDKIYNTKN 329
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
PF +ME ISL+GKTNFFEK+VGEYQK VM N ++VF +D DF
Sbjct: 330 PFSFMEFISLEGKTNFFEKKVGEYQKWGVM----ANRLDNVFTLDADF 373
>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 339
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/319 (51%), Positives = 210/319 (65%), Gaps = 27/319 (8%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
R + PIQ+ +W+ YK A W EEVDL++D W++ L DE+HF+ H+LAFFA++
Sbjct: 7 RKVILPIQHANLWKAYKTALDCVWKVEEVDLTKDWEDWQNKLNEDERHFLKHILAFFASA 66
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV NL +V EAR FY QI IEN+HSEMYSLL+ YIK+ EK L AF
Sbjct: 67 DSIVNINLIDYVRGKVAELEARYFYDQQIFIENVHSEMYSLLIFEYIKDEQEKDTLLNAF 126
Query: 135 ETVPCVAKKADWALNWID--------------------GSETFAE---RLIAFACVEGIF 171
+ CV KKA WAL W + G +T +E R++AFA VEG+F
Sbjct: 127 NDIECVRKKAQWALKWTESAWWQDWLVNPATRWCNRLMGKQTPSELAVRMVAFAIVEGVF 186
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVKGI 228
FSGSF AIF++K +G+MPGLTFSNELISRDEGLH +FACL Y+ +KLS ER+ +
Sbjct: 187 FSGSFAAIFYIKTKGVMPGLTFSNELISRDEGLHTNFACLYYNEYIPEHDKLSSERILDM 246
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
EAVEIE+EF ALPC+L+GMN M +YIEFVADRLL L K + +NPF++M
Sbjct: 247 FIEAVEIEKEFFKTALPCSLLGMNTESMCRYIEFVADRLLVDLNQPKHFMASNPFNFMTN 306
Query: 289 ISLQGKTNFFEKRVGEYQK 307
IS++GKTNFFE+RVGEY++
Sbjct: 307 ISMEGKTNFFERRVGEYRR 325
>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
Length = 224
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 147/221 (66%), Positives = 180/221 (81%), Gaps = 3/221 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L N DRF +FPI++ +IWE YKK EASFWTAEE+DL QDI W + L DEK+FI
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDITDWNTKLNEDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A E P + +KA+WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDKLFHAIEVFPAIKRKAEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERV 225
GLMPGLTFSNELISRDEG+HCDFA +++ L NK+ +ER+
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHIHNHHLINKVPKERI 224
>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
Length = 339
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/319 (51%), Positives = 201/319 (63%), Gaps = 27/319 (8%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
R + PIQ+ ++W YK A W EEVDLS+D W L E+ FI H+LAFFA++
Sbjct: 7 RKVILPIQHEKLWRAYKTALDCMWKVEEVDLSRDYEDWCTKLNERERFFIKHILAFFASA 66
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV NL V EAR FY QI IEN+HSEMYSLL+ YIKN E++ L AF
Sbjct: 67 DSIVNINLIDYVRDAVGELEARYFYDQQILIENVHSEMYSLLIFEYIKNEKEQNELLNAF 126
Query: 135 ETVPCVAKKADWALNWI---------------------DGSET--FAERLIAFACVEGIF 171
E V CV KKA WAL W DGS A R++AFA VEG+F
Sbjct: 127 EDVKCVRKKAQWALKWTESSWWRDWLVNPLVKLWRTWRDGSSASKLARRMVAFAIVEGVF 186
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVKGI 228
FSGSF AIF++K +G+MPGLTFSNELISRDEGLH +FACL Y+ R+K+S + +
Sbjct: 187 FSGSFAAIFFIKTKGIMPGLTFSNELISRDEGLHTNFACLYYNEYIDERDKMSSAEILDM 246
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
EAV IE+EF ALPC L+GMN M +YIEFVADRLL L K + NPF++M
Sbjct: 247 FVEAVNIEKEFFTSALPCDLLGMNSRAMCEYIEFVADRLLTELQQPKHFNTPNPFNFMNN 306
Query: 289 ISLQGKTNFFEKRVGEYQK 307
ISL+GKTNFFE+RVGEY++
Sbjct: 307 ISLEGKTNFFERRVGEYKR 325
>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
Length = 318
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 212/321 (66%), Gaps = 15/321 (4%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAAS 74
R +FPI ++W+ YKKA W EE+D+S+D W + L E+ F+ HVLAFFAA+
Sbjct: 6 RKTLFPIVNEDLWQSYKKALDCHWKVEEIDMSKDFDDWNNKLNDKERFFLKHVLAFFAAA 65
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ V EA FY Q +IE +H+EMY++L+ YIK+ E R+ A
Sbjct: 66 DVIVNTNIIEHMQSAVPEMEASFFYAQQTSIECVHTEMYNILVVEYIKDPQECDRILNAI 125
Query: 135 ETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLK--KRGLMPGL 191
E + V +KA WA WI+ + TFAER++AFA VEG+FFSGSF AI+++K K+G +PGL
Sbjct: 126 EHIDSVKRKATWAQKWIESQTATFAERMVAFAIVEGVFFSGSFAAIYYIKDTKKGALPGL 185
Query: 192 TFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVKGIVKEAVEIEREFVCDALPCAL 248
T+SNELISRDEGLH DFACL Y+ +KLSE +V + KEAV+IE++F +ALP A+
Sbjct: 186 TYSNELISRDEGLHTDFACLYYNKYIAKEDKLSESKVLNMFKEAVDIEKDFFTNALPVAM 245
Query: 249 VGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN M +YIEFVADRLL LG K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 246 LGMNAHSMCEYIEFVADRLLIELGYEKYFKTLNPFEFMNNISLEGKTNFFEKRVGEYKRF 305
Query: 309 SVMSSLNGNGGNHVFKMDEDF 329
N +++ EDF
Sbjct: 306 G--------AANETYEILEDF 318
>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 318
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 210/321 (65%), Gaps = 15/321 (4%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
R + PI ++W+ YKKA W EE+D+S+D W + L E+ F+ HVLAFFAA+
Sbjct: 6 RKTLLPIVNEDLWQSYKKAVDCHWKVEEIDMSKDFDDWNKKLNDKERFFLKHVLAFFAAA 65
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV N+ V EA FY Q IE +H+EMY++L+ YIK+ E R+ A
Sbjct: 66 DVIVNTNIIEHMQSAVPELEASFFYAQQTFIECVHTEMYNILVVEYIKDPQECDRILNAI 125
Query: 135 ETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLK--KRGLMPGL 191
E + V +KA WA WI+ S TFAER++AFA VEG+FFSGSF AI+++K K+G +PGL
Sbjct: 126 EHIDSVKQKAAWAQKWIENQSATFAERMVAFAIVEGVFFSGSFAAIYYIKDSKKGALPGL 185
Query: 192 TFSNELISRDEGLHCDFACLLYSLL---RNKLSEERVKGIVKEAVEIEREFVCDALPCAL 248
T+SNELISRDEGLH DFACL Y+ +NKLS+ +V + EAV+IE++F +ALP A+
Sbjct: 186 TYSNELISRDEGLHTDFACLYYNKYIPEKNKLSKTKVLSMFVEAVDIEKDFFTNALPVAM 245
Query: 249 VGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN M +YIEFVADRLL LG K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 246 LGMNSQSMCEYIEFVADRLLFELGYDKHFNTANPFEFMNNISLEGKTNFFEKRVGEYKRF 305
Query: 309 SVMSSLNGNGGNHVFKMDEDF 329
N +++ EDF
Sbjct: 306 G--------AANETYEILEDF 318
>gi|356577191|ref|XP_003556711.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 226
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/207 (74%), Positives = 174/207 (84%)
Query: 35 EASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSE 94
+AS + EEVDLS D+R W +L+ ++HFITHVL FFAASD IVLENL +RF KE+Q+ E
Sbjct: 13 DASCFYTEEVDLSSDLRHWATLSDGKRHFITHVLTFFAASDDIVLENLGSRFTKEIQLLE 72
Query: 95 ARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS 154
ARAFYGFQIAIENIHSEMYSL LETY K+S +K+ LFRA T+PC+ KKA WAL I+ S
Sbjct: 73 ARAFYGFQIAIENIHSEMYSLFLETYTKDSXKKNCLFRAINTIPCITKKAQWALQXINAS 132
Query: 155 ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 214
E+FAERL+AFACV GIFFSGSFCAIFWLKKRGLM GLTFSNE ISRDEGLH DFACLLY
Sbjct: 133 ESFAERLMAFACVXGIFFSGSFCAIFWLKKRGLMSGLTFSNEFISRDEGLHYDFACLLYL 192
Query: 215 LLRNKLSEERVKGIVKEAVEIEREFVC 241
LLR KLSE RVK IV +AVEIEREFVC
Sbjct: 193 LLRKKLSEGRVKEIVCDAVEIEREFVC 219
>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ectropis obliqua NPV]
gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ectropis obliqua NPV]
Length = 341
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/342 (47%), Positives = 209/342 (61%), Gaps = 36/342 (10%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAAS 74
R + PI+ +W M K A W EE DLS+D W L E+ F+ H+LAFFA++
Sbjct: 8 RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASA 67
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D IV NL V EAR FY QI IEN+HSEMYSLL+ YIKNS+E+++L AF
Sbjct: 68 DTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAF 127
Query: 135 ETVPCVAKKADWALNWIDGS------------------------ETFAERLIAFACVEGI 170
+ + C+ KKA WAL W + A R+IAFA VEGI
Sbjct: 128 DRIDCIKKKAQWALKWTESKWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEGI 187
Query: 171 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS---LLRNKLSEERVKG 227
FFSGSF AIF++K +GLMPGLTFSNELISRDEGLH DFAC+ Y+ + KLS +++
Sbjct: 188 FFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINEKLSPQQILS 247
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+ EAV+IE+EF ALPC L+G+N M +YIEFVADRLL L K + NPF++M
Sbjct: 248 MFIEAVDIEKEFFTTALPCYLLGINATEMCKYIEFVADRLLVELRQPKHFNTPNPFNFMT 307
Query: 288 LISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
ISL+GKTNFFE+RVGEY++ G V+++ E+F
Sbjct: 308 NISLEGKTNFFERRVGEYKRFG--------AGQDVYEILEEF 341
>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit, partial
[Drosophila melanogaster]
Length = 214
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 171/214 (79%), Gaps = 1/214 (0%)
Query: 82 LAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVA 141
L RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI++ ++ LF A ET+P V
Sbjct: 1 LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60
Query: 142 KKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 200
+KADWAL+WI S F ER+IAFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISR
Sbjct: 61 RKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISR 120
Query: 201 DEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYI 260
DEGLHCDFA L++ L + ER+ I+++AV IE+EF+ DALP L+GMN LMSQYI
Sbjct: 121 DEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMNCDLMSQYI 180
Query: 261 EFVADRLLGALGCGKVYGVTNPFDWMELISLQGK 294
EFVADRLL LG GK+Y NPF++ME+ISL GK
Sbjct: 181 EFVADRLLVELGVGKIYNTKNPFNFMEMISLDGK 214
>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
Length = 342
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 211/308 (68%), Gaps = 5/308 (1%)
Query: 23 QYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENL 82
++ +++ +YKK A FWT EE+DL++D+ W+ + DE+ FI H+LAFFA+ D IV+EN+
Sbjct: 39 EFADVYALYKKEIACFWTVEEIDLNEDVACWDKCSEDEQRFIGHILAFFASLDQIVMENV 98
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAK 142
+ F E+++ + R+ + Q AIE+IH E Y+LL++TYIK+ +++ + R+ + +P + K
Sbjct: 99 SVNFGDEIKIPQIRSHFAMQNAIESIHGETYALLIQTYIKDPEKQVTMLRSIQEMPIITK 158
Query: 143 KADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 201
KA W W+D + AERL+AF CVEG+ FSG+FCAI+WLKK+G GL F+N LI+RD
Sbjct: 159 KAQWVTAWMDPEVASLAERLVAFTCVEGVQFSGAFCAIYWLKKQGRFRGLCFANSLIARD 218
Query: 202 EGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIE 261
EGLH + + ++Y+ L+++L V I +AV +E+EF+ ++LP +L+G+N MS YIE
Sbjct: 219 EGLHAEGSVMIYNHLKHRLPVAVVHDIFTDAVALEKEFIRESLPVSLIGINADTMSSYIE 278
Query: 262 FVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNH 321
+V+D + LG K++G NPF+WM +I ++GK+NFFE RV EY KA M+ N +
Sbjct: 279 YVSDFWIQRLGYPKLFGTKNPFEWMTMIGMEGKSNFFEGRVAEYAKAGSMT----NEDDR 334
Query: 322 VFKMDEDF 329
F D F
Sbjct: 335 AFTTDAVF 342
>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 240
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 146/231 (63%), Positives = 172/231 (74%), Gaps = 1/231 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPI+Y +IW YK A ASFWTA+E+DLS+D WE LT E+ FI+
Sbjct: 10 DEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEKLTDGERFFIS 69
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VL+FFAASDGIV ENL RF EVQV EAR FYGFQI +E +HSEMYS ++E YIK+
Sbjct: 70 RVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIKDPK 129
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ F A C+ KKADWAL WID + F RLIAFA VEGI FSGSF AIFWLKK
Sbjct: 130 EQMVHFDAIHQFECIKKKADWALRWIDDRNSPFPVRLIAFAAVEGIMFSGSFAAIFWLKK 189
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEI 235
RG+M GLT SNELISRDEGLH DFACLLY +++K S+E+V I+KEAV +
Sbjct: 190 RGVMKGLTHSNELISRDEGLHRDFACLLYKYIKHKPSQEQVYEIIKEAVSL 240
>gi|409049898|gb|EKM59375.1| hypothetical protein PHACADRAFT_249825 [Phanerochaete carnosa
HHB-10118-sp]
Length = 221
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 170/217 (78%), Gaps = 2/217 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAASDGIVLENLAARFMK 88
MYKKAEASFWTAEE+DL D+ W + L DE+ FI+HVLAFFAASDGIV ENL RF
Sbjct: 1 MYKKAEASFWTAEELDLGHDLVDWNDKLNPDERRFISHVLAFFAASDGIVNENLVERFSN 60
Query: 89 EVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWAL 148
EVQ +EAR FYGFQ+ IENIHSE YSLL++TYIK+ E+ LF A +T+PC+ KKADWAL
Sbjct: 61 EVQAAEARCFYGFQVMIENIHSETYSLLIDTYIKDPQERDFLFDAIDTIPCIKKKADWAL 120
Query: 149 NWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 207
WI + +F ERLIAFA VEGIFFSG F +IFWLKKRGLMPGLTFSNELISRDEG+H D
Sbjct: 121 RWISNKQSSFGERLIAFATVEGIFFSGCFASIFWLKKRGLMPGLTFSNELISRDEGMHTD 180
Query: 208 FACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
FACLL+ L+ + + +K I+ EAVEIE+EF+ +
Sbjct: 181 FACLLFHHLKRRPHPDIIKTIITEAVEIEKEFLTGGI 217
>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 226
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/232 (63%), Positives = 175/232 (75%), Gaps = 7/232 (3%)
Query: 98 FYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETF 157
FYGFQIAIENIHSEMYS L+ET I++ +E++ LF A E +P + KKA WA WI +F
Sbjct: 2 FYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSF 61
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 217
R +AFACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ +
Sbjct: 62 DTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYIN 121
Query: 218 NKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVY 277
NK + ++ IV+EAV IE+EF+ ++LP +L+GMN LM QYIEFVADRLL ALG K+Y
Sbjct: 122 NKCT--VIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIY 179
Query: 278 GVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V+NPFD+ME ISLQGKTNFFE+R YQK V G F ++EDF
Sbjct: 180 NVSNPFDFMENISLQGKTNFFERREANYQKGYV-----GIDNEFKFNLNEDF 226
>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
Length = 306
Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNK 219
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290
>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
Length = 306
Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNK 219
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290
>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 251
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/215 (64%), Positives = 165/215 (76%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF A E +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS 221
LMPGLTFSNELISRDEGLH DFACLL+ + NK +
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT 240
>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
Length = 309
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 205/307 (66%), Gaps = 9/307 (2%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDL-SQDIRQWESLTADEKHFITHVLAFFAA 73
+R+ PI+ ++++M+KK FWT +E+++ S D+R+W LT DE+ F +L FFA+
Sbjct: 2 ERYVTPPIKNLDLYDMWKKHVRCFWTKDEINITSSDLREWNDLTPDERQFFKCILGFFAS 61
Query: 74 SDGIVLENLAARFMKEVQVS-EARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
++ IV +NLA RF+ + +S EAR FY FQIA+ENIHSE Y LL Y+ E++ L
Sbjct: 62 TNIIVSDNLALRFLADPNISREARCFYSFQIAMENIHSETYIELLTAYVPEEKERNELLY 121
Query: 133 AFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
+ + PC+ K+ WA+ W+ D T+AERL+AFA VEGI FS SF I+W+K+ GL+ GL
Sbjct: 122 SIISWPCLNVKSRWAVKWMNDEFATYAERLVAFAVVEGIMFSSSFAGIYWIKQSGLLAGL 181
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
T +NE ISRDEGLHC FAC +Y ++ +L + +V+ IV E E+E+ FV AL L+GM
Sbjct: 182 TQANEFISRDEGLHCTFACTMYGKIKPRLPDTKVRKIVLEGCEVEKLFVKHALRKPLLGM 241
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM Y+ FV D LL LG K +GV NPF +M+ IS+QGKTNFFE+RV EY +
Sbjct: 242 NSHLMETYVNFVTDNLLTDLGYEKEFGVNNPFPFMDNISMQGKTNFFERRVTEYTR---- 297
Query: 312 SSLNGNG 318
L G+G
Sbjct: 298 --LTGHG 302
>gi|401840133|gb|EJT43042.1| RNR4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 345
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/311 (45%), Positives = 207/311 (66%), Gaps = 2/311 (0%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S +E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D +++LT D+K
Sbjct: 21 SEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQTLTEDQKA 80
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
+I ++LA +SD IV + L F ++Q E ++FYGFQI +ENI++E+YS++++ + K
Sbjct: 81 YIGNLLALSISSDNIVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYAEVYSMMVDAFFK 140
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFW 181
LF+ T+P V KA + WI ++ +AERL+AFA EGIF +G++ ++FW
Sbjct: 141 EPTNIP-LFKEIATLPEVKNKAAFIEKWITNDDSLYAERLVAFAAKEGIFQAGNYASVFW 199
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
L + ++PGLT +N I RD G + DF+CLL++ LR K + + + I+ EAVEIE+E+
Sbjct: 200 LTNKNILPGLTMANRNICRDRGAYTDFSCLLFAHLRTKPNVKITERIITEAVEIEKEYYS 259
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
++LP GM+ + YIEFVAD LL G K Y +NPF++ME ++ GKT FFEKR
Sbjct: 260 NSLPVEKFGMDLKNIHTYIEFVADGLLQGFGNEKYYNASNPFEFMEDVATAGKTTFFEKR 319
Query: 302 VGEYQKASVMS 312
V +YQKAS MS
Sbjct: 320 VSDYQKASDMS 330
>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
Length = 345
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 205/308 (66%), Gaps = 2/308 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D ++ LT D+K +I
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENIHSE+YS++++ + K+
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIHSEVYSMMVDAFFKDP- 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+ +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTD 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+ +MPGL +N I RD G + DF+CLL++ LR K + + ++ I+ EAVEIE+E+ ++L
Sbjct: 203 KKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P GM+ + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V +
Sbjct: 263 PVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSD 322
Query: 305 YQKASVMS 312
YQKAS MS
Sbjct: 323 YQKASDMS 330
>gi|323337103|gb|EGA78359.1| Rnr2p [Saccharomyces cerevisiae Vin13]
Length = 296
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 163/209 (77%), Gaps = 2/209 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLL 212
KRG+MPGLTFSNELI RDEGLH DFACL
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLF 283
>gi|398366047|ref|NP_011696.3| ribonucleotide-diphosphate reductase subunit RNR4 [Saccharomyces
cerevisiae S288c]
gi|1710402|sp|P49723.1|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
AltName: Full=Ribonucleotide reductase R2 subunit 2;
AltName: Full=Ribonucleotide reductase small subunit 2
gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
gi|285812375|tpg|DAA08275.1| TPA: ribonucleotide-diphosphate reductase subunit RNR4
[Saccharomyces cerevisiae S288c]
gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
gi|349578387|dbj|GAA23553.1| K7_Rnr4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299434|gb|EIW10528.1| Rnr4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 345
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/308 (45%), Positives = 205/308 (66%), Gaps = 2/308 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D ++ LT D+K +I
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + K+
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+ +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTD 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+ +MPGL +N I RD G + DF+CLL++ LR K + + ++ I+ EAVEIE+E+ ++L
Sbjct: 203 KKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P GM+ + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V +
Sbjct: 263 PVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSD 322
Query: 305 YQKASVMS 312
YQKAS MS
Sbjct: 323 YQKASDMS 330
>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
Length = 328
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 204/308 (66%), Gaps = 2/308 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D ++ LT D+K +I
Sbjct: 7 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 66
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + K+
Sbjct: 67 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+ +P V K + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 126 KNIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTD 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+ +MPGL +N I RD G + DF+CLL++ LR K + + ++ I+ EAVEIE+E+ ++L
Sbjct: 186 KKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSL 245
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P GM+ + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V +
Sbjct: 246 PVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSD 305
Query: 305 YQKASVMS 312
YQKAS MS
Sbjct: 306 YQKASDMS 313
>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765447|gb|EHN06955.1| Rnr4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 345
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 204/308 (66%), Gaps = 2/308 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D ++ LT D+K +I
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + K+
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+ +P V K + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 KNIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTD 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+ +MPGL +N I RD G + DF+CLL++ LR K + + ++ I+ EAVEIE+E+ ++L
Sbjct: 203 KKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P GM+ + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V +
Sbjct: 263 PVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSD 322
Query: 305 YQKASVMS 312
YQKAS MS
Sbjct: 323 YQKASDMS 330
>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
Length = 335
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 212/330 (64%), Gaps = 7/330 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EA+FWTAE+++L++D++ WE+L+A +K F
Sbjct: 7 DEVLLMENKRRFVMFPIKYHEIWAAYKKVEAAFWTAEDMELAKDVKDWETLSAGQKEFFG 66
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+ LA + +D IV +N+ +F E+Q E ++FYGFQI +ENI+ E+YS+L++ + D
Sbjct: 67 NYLAICSRTDNIVNKNIVEKFSAELQNPEGKSFYGFQIMMENIYDEIYSMLVDALFTSVD 126
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL-K 183
LF+A V K++WA W+ D +AERL+A A EGIF SG+F A++WL K
Sbjct: 127 NIP-LFKAVCQQEEVKAKSEWAHRWVFDDESLYAERLVASAAREGIFMSGAFAALYWLTK 185
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
++G+MPG+ + I RD G + DFACLL++ L+ K + + ++ I+ EAVEIE+ ++
Sbjct: 186 EKGIMPGVAMATNHICRDRGFYADFACLLFAHLKTKPNPKIIEQIITEAVEIEKAHYRNS 245
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
+P +GM+ + QYIE VAD+LL + G K Y TNPF +ME + GKTNFFEK+V
Sbjct: 246 MPIEKLGMDLKEIDQYIESVADKLLVSFGNEKFYNATNPFPFMEEATSIGKTNFFEKKVS 305
Query: 304 EYQKASVMSSLNGNGG----NHVFKMDEDF 329
+YQKAS S G + K D DF
Sbjct: 306 DYQKASATSGTAKTAGSVASSDKIKFDSDF 335
>gi|401625558|gb|EJS43558.1| rnr4p [Saccharomyces arboricola H-6]
Length = 346
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 210/325 (64%), Gaps = 3/325 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDSEDFQELTDDQKAYVG 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++LA +SD IV + L F ++Q E ++FYGFQI +ENI++E+YS++++ + K+
Sbjct: 84 NLLALSISSDNIVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYAEVYSMMVDAFFKDP- 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+ T+P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 KNIPLFKEVATLPEVKDKAAFVEKWIFNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTD 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+ +MPGL +N I RD G + DF+CLL++ LR K + + + I+ EAVEIE+E+ ++L
Sbjct: 203 KNIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNVKITERIITEAVEIEKEYYSNSL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P G++ + YIEFVAD LL G K Y NPF++ME ++ GKT FFEKRV +
Sbjct: 263 PVEKFGIDLKSIHSYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKRVSD 322
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKAS +S + D+DF
Sbjct: 323 YQKASDVSKTASPPSKDI-NFDDDF 346
>gi|217071966|gb|ACJ84343.1| unknown [Medicago truncatula]
Length = 206
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 152/180 (84%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEP+L RFCMFP++Y ++WEMYKKAEASFWTAEEVDLS D++ W +L+ EKHFI+
Sbjct: 18 EEPILMKQTQRFCMFPVRYKQLWEMYKKAEASFWTAEEVDLSYDVQHWATLSDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIVLENLAARF+ +VQ+ EARAFYGFQIAIENIHSEMYSLLLETYIK+S
Sbjct: 78 HVLAFFATSDGIVLENLAARFLNDVQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDSR 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF A E +PCVA+KA+WAL+WI+ S +FAERL+ FACVEGIFFS + F LK+R
Sbjct: 138 EKHKLFNAIENLPCVARKAEWALSWINSSTSFAERLVGFACVEGIFFSEASVPYFGLKER 197
>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 247
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
T+I+++ EK R+F A ET+P V KA+WAL WI+ FAERL+A+ACVEGI FSGSFCA
Sbjct: 39 TFIEDAQEKERIFEAIETIPSVQHKAEWALAWINDDNCFAERLVAYACVEGILFSGSFCA 98
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-NKLSEERVKGIVKEAVEIER 237
+FWLKKRGLMPGLTFSNELISRDEGLH DF CLLY++L+ +L EERV+ IV+ AV +ER
Sbjct: 99 LFWLKKRGLMPGLTFSNELISRDEGLHTDFGCLLYNMLKFTRLPEERVEDIVRSAVNVER 158
Query: 238 EFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNF 297
EF+ DALP L+GMN LM +YIEFVADRLL ALG K+Y NPFDWM +ISLQGKTNF
Sbjct: 159 EFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSANPFDWMTMISLQGKTNF 218
Query: 298 FEKRVGEYQKASVMSSLNGNGGNHV 322
FEKRV K G GG V
Sbjct: 219 FEKRVERVPK----RQCGGGGGKRV 239
>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
Length = 192
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 114 SLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFF 172
SLL+ TYI++ E+ LF A ET+P V +KADWAL WI D + TFAERL+AFA VEGIFF
Sbjct: 1 SLLINTYIRDLKERDYLFNAIETLPYVKRKADWALQWISDTNSTFAERLVAFAAVEGIFF 60
Query: 173 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEA 232
SGSF AIFWLKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L+ K S +RVK I+ +A
Sbjct: 61 SGSFAAIFWLKKRGLMPGLTYSNELISRDEGLHCNFACLIYSQLQKKPSADRVKDIITKA 120
Query: 233 VEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ 292
V IE+EF+ +ALP L+G+N LM QYIEFVADRLL LG KVY NPFD+ME ISL+
Sbjct: 121 VRIEQEFLTEALPVDLIGINSYLMKQYIEFVADRLLTDLGIPKVYEAENPFDFMEFISLE 180
Query: 293 GKTNFFEKRVGE 304
GKTNFFEKRV E
Sbjct: 181 GKTNFFEKRVAE 192
>gi|380863082|gb|AFF18834.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
Length = 180
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/166 (75%), Positives = 144/166 (86%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
+ EEP+L RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDLSQD++QWE L+ EKHF
Sbjct: 15 VEEEPILMEQNQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWERLSDSEKHF 74
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
ITHVLAFFAASDGIVLENLAARF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIK+
Sbjct: 75 ITHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 134
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEG 169
S EK RLF A E++PCVA KA WAL WI S +FAERL+AFACVEG
Sbjct: 135 SKEKHRLFNAIESIPCVASKAKWALEWIHSSTSFAERLVAFACVEG 180
>gi|366987723|ref|XP_003673628.1| hypothetical protein NCAS_0A06890 [Naumovozyma castellii CBS 4309]
gi|342299491|emb|CCC67247.1| hypothetical protein NCAS_0A06890 [Naumovozyma castellii CBS 4309]
Length = 345
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 205/308 (66%), Gaps = 3/308 (0%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
S +E LL N RF MFPI+Y EIW YKK EA+FWTAEE++L +D++ ++ LT D+K
Sbjct: 23 SEKDEILLIENAHRFVMFPIKYHEIWAAYKKVEAAFWTAEEIELEKDVQDFQKLTDDQKQ 82
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ +LA S+ ++ +++ +F ++Q E ++FYGFQI +ENI+ E+YS++++T+
Sbjct: 83 FLARLLALLTVSEDVINKHIIEKFSAQLQNPEGKSFYGFQIMMENIYDEVYSMMVDTFF- 141
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFW 181
N EK F+ ++P +K D+ WI ++ +AERL+A A EGIFFSG + A+ W
Sbjct: 142 NGPEKVPFFKEVPSLPEQKEKVDYINRWIKNQDSLYAERLVALAAKEGIFFSGVYAALGW 201
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
L + G PGLT +N+ I RD+G + DF CLL++ L+ K + ++ I+ EAVEIE+ +
Sbjct: 202 LGQTGF-PGLTTANKSICRDKGAYSDFNCLLFAHLKQKPDAKIIEKIILEAVEIEKNVLK 260
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
+ L G++ AL++QY+EF AD LL + G KV+ V NPFD+ME + GK+NFFEK+
Sbjct: 261 NVLKVDKFGVDAALINQYVEFTADGLLSSFGNQKVFNVNNPFDFMEGATAIGKSNFFEKK 320
Query: 302 VGEYQKAS 309
V ++ +++
Sbjct: 321 VSDFTQSA 328
>gi|225434341|ref|XP_002276454.1| PREDICTED: uncharacterized protein LOC100256951 [Vitis vinifera]
Length = 841
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 149/176 (84%), Gaps = 1/176 (0%)
Query: 154 SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 213
S FAERLIAFACVEGIFFSGSFCAIFWLKK+GLMPGLTFSNELISR EGLHCDFACLLY
Sbjct: 667 STLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLY 726
Query: 214 SLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGC 273
SLL+ +L ++V IV EA+EIE +F+C+ALPCAL+GM LMS YI+FV DRLL ALG
Sbjct: 727 SLLQKQLPWQKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLVALGY 786
Query: 274 GKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+ Y V NPFDWME I LQG NFF++R+G+YQKAS+MSSL+G G N+VFK+DEDF
Sbjct: 787 ERKYNVENPFDWMEFIFLQGNANFFQRRMGDYQKASIMSSLDG-GKNYVFKIDEDF 841
>gi|359496795|ref|XP_003635337.1| PREDICTED: uncharacterized protein LOC100267871 [Vitis vinifera]
Length = 668
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/177 (75%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
Query: 153 GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL 212
S FAERLI FACVE IFF GSFC IFW KKRGLMPGLTFSNELISRDEGLHCDFACLL
Sbjct: 494 SSTLFAERLITFACVERIFFLGSFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLL 552
Query: 213 YSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALG 272
Y LL+N L+ ERV IV EAVEIE +FVC+AL CAL+GMN LMSQYI+FVAD LL A+G
Sbjct: 553 YKLLKNSLTLERVHHIVHEAVEIETQFVCEALLCALIGMNATLMSQYIKFVADHLLVAIG 612
Query: 273 CGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+ Y V NPFDWME ISLQG NFF++RVG+YQKASVMSSL+G G N+VFK+DEDF
Sbjct: 613 YERKYNVENPFDWMEFISLQGNANFFQRRVGDYQKASVMSSLDG-GKNYVFKIDEDF 668
>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 149/176 (84%), Gaps = 1/176 (0%)
Query: 154 SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 213
S FAERLIAFACVEGIFFSGSFCAIFWLKK+GLMPGLTFSNELISR EGLHCDFACLLY
Sbjct: 95 STLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLY 154
Query: 214 SLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGC 273
SLL+ +L ++V IV EA+EIE +F+C+ALPCAL+GM LMS YI+FV DRLL ALG
Sbjct: 155 SLLQKQLPWQKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLVALGY 214
Query: 274 GKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+ Y V NPFDWME I LQG NFF++R+G+YQKAS+MSSL+G G N+VFK+DEDF
Sbjct: 215 ERKYNVENPFDWMEFIFLQGNANFFQRRMGDYQKASIMSSLDG-GKNYVFKIDEDF 269
>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
Length = 219
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 156/204 (76%), Gaps = 5/204 (2%)
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF A + +PCV KKADWALNWI + F ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 20 KRYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGSFASIFWLKKR 79
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV I++EAV IE+EF+ ALP
Sbjct: 80 GLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFLTKALP 139
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK+VGEY
Sbjct: 140 VDLLGMNCELMSQYIEFVADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEKKVGEY 199
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VM+ N ++VF +D DF
Sbjct: 200 QKWGVMA----NRLDNVFTLDADF 219
>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 211
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 161/218 (73%), Gaps = 7/218 (3%)
Query: 112 MYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIF 171
MYS L+ET I++ +E++ LF A E +P + KKA WA WI +F R +AFACVEGIF
Sbjct: 1 MYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIF 60
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + NK + ++ IV+E
Sbjct: 61 FSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVRE 118
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AV IE+EF+ ++LP +L+GMN LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISL
Sbjct: 119 AVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISL 178
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
QGKTNFFE+R YQK V G F ++EDF
Sbjct: 179 QGKTNFFERREANYQKGYV-----GIDNEFKFNLNEDF 211
>gi|76163066|gb|AAX30834.2| SJCHGC08068 protein [Schistosoma japonicum]
Length = 230
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/182 (69%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL PNP RF +FPI+Y +IW YKKA ASFWT EEVDLS+D WESL E+HFI++
Sbjct: 40 EPLLKPNPHRFVLFPIEYHDIWHFYKKAVASFWTVEEVDLSKDFTHWESLKVGERHFISY 99
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENL RF +EVQ+ E R FYG QIAIENIHSEMYSLL++TYIK+S E
Sbjct: 100 VLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKE 159
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A + CVAKKA WAL+WI D TFAERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 160 RDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAERLVAFAAVEGVFFSGSFAAIFWLKSE 219
Query: 186 GL 187
L
Sbjct: 220 DL 221
>gi|380863084|gb|AFF18835.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
Length = 158
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/158 (77%), Positives = 138/158 (87%)
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V I+ E
Sbjct: 1 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHIIHE 60
Query: 232 AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISL 291
AVEIE EFVC+ALPCAL+GMN +LMSQYI+FVADRLL +LGC + Y V NPFDWME ISL
Sbjct: 61 AVEIETEFVCEALPCALIGMNSSLMSQYIKFVADRLLVSLGCQRKYNVENPFDWMEFISL 120
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
QGK NFFE+RVG+YQKAS+MSSL G N VFK+DEDF
Sbjct: 121 QGKANFFERRVGDYQKASIMSSLQNGGKNFVFKLDEDF 158
>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
echinatior]
Length = 210
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/183 (69%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
Query: 130 LFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A ET+PCV KKA+WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWLKKRG+M
Sbjct: 10 LFNAIETLPCVRKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKRGVM 69
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCAL 248
PGLTFSNELISRDEGLHCDFACL++ + K S ERVK IV +AVEIE+EF+ ALP L
Sbjct: 70 PGLTFSNELISRDEGLHCDFACLMFKHIVQKPSFERVKSIVMDAVEIEKEFLTQALPVEL 129
Query: 249 VGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN M YIEFVADRL ALG KVY NPF +M+ IS+ GKTNFFEK+VGEY+K
Sbjct: 130 IGMNRTFMCNYIEFVADRLFVALGFEKVYNSENPFSFMDFISMMGKTNFFEKKVGEYKKF 189
Query: 309 SVM 311
VM
Sbjct: 190 GVM 192
>gi|365985840|ref|XP_003669752.1| hypothetical protein NDAI_0D01950 [Naumovozyma dairenensis CBS 421]
gi|343768521|emb|CCD24509.1| hypothetical protein NDAI_0D01950 [Naumovozyma dairenensis CBS 421]
Length = 352
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 200/325 (61%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EA+FWTAEE++L +D++ + L D+K FI
Sbjct: 31 DEILLMENSRRFVMFPIKYHEIWAAYKKVEAAFWTAEEIELEKDVKDFSKLNDDQKEFIA 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
VLA+ S+ I+ ++L +F E+Q E ++ YGFQI +ENI+ E+YS++++ + N
Sbjct: 91 RVLAYLTVSEDIINKHLVEKFSAELQNPEGKSLYGFQIMMENIYDEVYSMIVDA-LYNGP 149
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E F+ + +KA + WI ++ + ERL+A + EGIFFSG + A+ WL
Sbjct: 150 ENVPYFKQVPSTVQHQEKAAFIQRWIHNPDSLYGERLVALSAKEGIFFSGVYAALGWLGN 209
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
PG++ +N+ I RD+G + DF CLL++ L+ K + V+ I+ EAV+IE + + A
Sbjct: 210 TAGFPGISTANKFICRDKGAYADFGCLLFAHLKTKPDAKIVEKIITEAVDIELDVMNKAF 269
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
G++ AL+ QY++F+AD LL + G KVY VTNPF++M + GK+NFFEK+V +
Sbjct: 270 EVEKFGVDPALIKQYVQFIADSLLSSFGNDKVYNVTNPFEFMAGATQIGKSNFFEKKVSD 329
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
+ K V ++ N K +E F
Sbjct: 330 FTK--VTTADKANKSAESIKFNESF 352
>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
Length = 351
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 205/328 (62%), Gaps = 5/328 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW--ESLTADEKHF 63
+E +LT N RF +FPI+Y EI++ YKK EA FWTAEE+D S+DI+ W + +T DEK +
Sbjct: 25 DESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEY 84
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
+LA FA++D + ENL E Q EA+ FYGFQI ++NIH E+Y +L+++ +K+
Sbjct: 85 FIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKD 143
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWL 182
++++ +F + + + +K ++A +W + + F E+LIA A V GIF ++ ++
Sbjct: 144 DEKRTSMFEEIKDLTNIKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSF 203
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
+K GL+PG + + RD GLH DF CL+Y+ L+N++ E V+ I+ +AVEIE++ +
Sbjct: 204 QKGGLIPGFVTGVDNMLRDRGLHVDFCCLMYAHLKNQIDSEIVQKIIVDAVEIEKKSLLK 263
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP V + M+Q+IE+VAD +L A G K Y TNP+++ME + L G TN K +
Sbjct: 264 ALPIIKVNLKIDEMNQFIEYVADSILVAFGNEKHYNATNPYEFMENVVLPGNTNSLAKTI 323
Query: 303 GEYQKASVMSSLNG-NGGNHVFKMDEDF 329
+ QKAS + + + F +EDF
Sbjct: 324 ADAQKASEFAKTSKPDAETTTFSFNEDF 351
>gi|215275538|sp|P0C8I0.1|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 181/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL + RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S N + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L L C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYKVENPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|215275539|sp|P0C8I1.1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EER + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
OURT 88/3]
gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
Length = 334
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 68
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 69 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 128
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 129 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 188
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 189 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 248
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 249 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 308
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 309 LRPTQYQ 315
>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
Benin 97/1]
Length = 327
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|132618|sp|P26713.1|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|215275540|sp|P0C8I2.1|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1172939|sp|P42492.1|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
Length = 334
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 68
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 69 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 128
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 129 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 188
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 189 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 248
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 249 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 308
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 309 LRPTQYQ 315
>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
Length = 198
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 149/193 (77%), Gaps = 5/193 (2%)
Query: 138 PCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 196
P KKADWALNWI + ++ ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNE
Sbjct: 10 PHRWKKADWALNWIGNQKASYGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNE 69
Query: 197 LISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALM 256
LISRDEGLHCDFACL++ L +K S + V I++ AVEIE+EF+ +ALP L+GMN LM
Sbjct: 70 LISRDEGLHCDFACLMFKHLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLM 129
Query: 257 SQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNG 316
+YIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEKRVGEYQ+ VM+
Sbjct: 130 KRYIEFVADRLLLELGFAKIYRAENPFDFMENISLEGKTNFFEKRVGEYQRMGVMAG--- 186
Query: 317 NGGNHVFKMDEDF 329
++ F++D DF
Sbjct: 187 -AADNTFRLDADF 198
>gi|367002223|ref|XP_003685846.1| hypothetical protein TPHA_0E03220 [Tetrapisispora phaffii CBS 4417]
gi|357524145|emb|CCE63412.1| hypothetical protein TPHA_0E03220 [Tetrapisispora phaffii CBS 4417]
Length = 352
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 201/333 (60%), Gaps = 7/333 (2%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW--ESLTADE 60
S +E +L N RF +FPI+Y E+++ YK+ EA FWTAEE+D ++DI + E ++ DE
Sbjct: 21 SQKDEVILIENHRRFVLFPIKYHEVYDAYKQREALFWTAEELDFTKDIENFNGEEISEDE 80
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K +IT +LA FA++D L NL EVQ+ EA+ FYGFQI ++NIH E+YSL+++
Sbjct: 81 KEYITRLLALFASNDMDKL-NLTENLSAEVQIPEAKCFYGFQIMLDNIHQEVYSLIIDAI 139
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAI 179
IK++ ++ +F + + + K ++A W + + F E+LIAFA V+GIF ++ +I
Sbjct: 140 IKDNGKRVSMFDDLKKLSNINDKLEYAKTWFENEDHLFGEKLIAFAAVQGIFSLAAYASI 199
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
F K L PGL + + RD LH DF L+Y+ L++ + V I+ +AV+IE+
Sbjct: 200 FSPKGGKLFPGLQKGVQNMFRDRALHTDFQSLMYAHLKHDVDPVVVNRIITDAVKIEKAS 259
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ D LP G+ A M Q IE VAD LL + G K Y V NPF +ME +++ G TN F
Sbjct: 260 LKDTLPIEKFGLKIAEMEQLIEHVADFLLVSFGAEKEYNVANPFPFMEKVAIPGNTNSFA 319
Query: 300 KRVGEYQKASVMSSLNGN---GGNHVFKMDEDF 329
K+V +Y KAS ++ + N G F M EDF
Sbjct: 320 KKVADYHKASDIAQTSTNEKKDGEANFSMTEDF 352
>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
hirsutus]
Length = 249
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/254 (52%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
Query: 77 IVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFET 136
IV +NL RF +EVQV EARAF+GFQI+ IHSEMYS+L+E+ IK+++EK+ +F ET
Sbjct: 1 IVNDNLVKRFSQEVQVPEARAFFGFQISNAGIHSEMYSVLIESLIKDANEKNLIFNTIET 60
Query: 137 VPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 195
VPCV KK DW L I D TF +++AFA VEGIFF+G AIFWL+++G+MPGLT SN
Sbjct: 61 VPCVKKKKDWVLRRIADDRVTFPLKVVAFATVEGIFFAGGAAAIFWLQEKGVMPGLTLSN 120
Query: 196 ELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGAL 255
ELI + E L+ DFACLL+ L + S E + I++EAV IE+EF LP +L+GM+ L
Sbjct: 121 ELIRKGESLYTDFACLLFKRLVQRPSVEEITEIIREAVIIEQEFSTKGLPVSLIGMDCEL 180
Query: 256 MSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLN 315
M+ YIEFVADRLL AL C KV+GV NPF +ME+ K F+K V +K V S+
Sbjct: 181 MTTYIEFVADRLLQALNCPKVFGVPNPFGFMEMKWANDKMR-FDKVVDLCRKNGVTST-- 237
Query: 316 GNGGNHVFKMDEDF 329
V M+ DF
Sbjct: 238 --SKEKVLDMNVDF 249
>gi|154283275|ref|XP_001542433.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
gi|150410613|gb|EDN06001.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
Length = 255
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 143/176 (81%), Gaps = 2/176 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+EPLL NP+RF +FP++Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE++FI
Sbjct: 78 DEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
+++ LF A ET+PC+ KKADWA+ WI D TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 198 KQRTYLFDAIETIPCIRKKADWAIRWIEDKDSTFAQRLVAFAAVEGIFFSGSFASI 253
>gi|444322762|ref|XP_004182022.1| hypothetical protein TBLA_0H02170 [Tetrapisispora blattae CBS 6284]
gi|387515068|emb|CCH62503.1| hypothetical protein TBLA_0H02170 [Tetrapisispora blattae CBS 6284]
Length = 352
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 199/330 (60%), Gaps = 7/330 (2%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES---LTADEKH 62
+E +L N RF +FPI+Y E+++ YKK EA+FWTAEE+D S+DI QW S +T D+K
Sbjct: 24 DEAILFENKRRFVLFPIKYHEVYDAYKKREANFWTAEEMDSSKDIEQWNSEGAITKDQKE 83
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FIT +LA F + D + +NL EVQ+ EA+ FYGFQI ++NIH+E+YSL ++ IK
Sbjct: 84 FITRLLAVFMSQD-FIDQNLTELLSAEVQIPEAKCFYGFQIMVDNIHAEVYSLAIDALIK 142
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ + +F + E + K + W +AE+L+AFA ++G+F + + F+L
Sbjct: 143 DEKTRVTMFESIEDNSNIKAKMAYNETWFGEDSLYAEKLVAFAALQGLFNLTGYVSAFYL 202
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
+ + ++PG N + +D +H DF L+++ L+NK + + ++ IV EAVE+E++ D
Sbjct: 203 QSKDILPGFNKMNVEMFKDHTMHTDFQALMFAHLKNKPNAKIIERIVTEAVELEKKAYDD 262
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+G++ M +IE VAD +L + G K Y +NPF +ME + L G++N FEK+V
Sbjct: 263 LFLVEKIGLSKKDMDLFIEVVADTILESFGNEKHYNASNPFPFMEGVELPGQSNSFEKKV 322
Query: 303 GEYQKASVMSSL---NGNGGNHVFKMDEDF 329
+YQKA M+ N + F +EDF
Sbjct: 323 SDYQKAGDMAKAEKENKAKADDAFAFNEDF 352
>gi|410078754|ref|XP_003956958.1| hypothetical protein KAFR_0D01760 [Kazachstania africana CBS 2517]
gi|372463543|emb|CCF57823.1| hypothetical protein KAFR_0D01760 [Kazachstania africana CBS 2517]
Length = 346
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 186/305 (60%), Gaps = 2/305 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EA+FW AEEVDL++D+ ++ L D+K F
Sbjct: 25 DEILLIENKRRFVMFPIKYHEIWAAYKKLEATFWPAEEVDLTKDVDDFKKLNEDQKDFFA 84
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
LA + ++ +L RF E+Q E ++FYGFQI +N++ E +S++++T+ +
Sbjct: 85 RYLAAATTGEANLVNHLIERFSAELQNPEGKSFYGFQIMAQNVYDEAHSMMIDTFFDGA- 143
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK + F T V K ++ WI+ E+ + ERL+A A E +F +G+ IFW
Sbjct: 144 EKVKYLNEFPTSKEVTAKLNFRKEWIESPESLYGERLVALAAKEALFLAGARAVIFWFIS 203
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+GL G+T I+RD G + DF CLL++ L+NK + + V+ I+ +A EIE+ ++ D L
Sbjct: 204 QGLFHGVTHGISNITRDRGFYSDFNCLLFAHLKNKPNAKVVEKIIVDATEIEKNYMADLL 263
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
G+ A ++QY+EF+AD LL + G K Y NPF++ME + GKTNFFEK V +
Sbjct: 264 KVEQSGLKSAQVNQYVEFLADSLLASFGNEKHYNAANPFEFMEGKTTIGKTNFFEKTVSD 323
Query: 305 YQKAS 309
Y KA+
Sbjct: 324 YTKAN 328
>gi|403217182|emb|CCK71677.1| hypothetical protein KNAG_0H02620 [Kazachstania naganishii CBS
8797]
Length = 346
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 195/306 (63%), Gaps = 4/306 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW--ESLTADEKHF 63
+E LL N RF MFPI+Y EIW YKKAEASFWTAEE++LS+D+ + +TA++ F
Sbjct: 23 DEILLIENKRRFVMFPIKYHEIWAAYKKAEASFWTAEEIELSKDVEDIADKKVTAEQLAF 82
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
+ +A + IV +L RF E+Q E ++FYGFQI +ENI+ E+YS++++ Y N
Sbjct: 83 LKKFMALLTLGEDIVNRHLIERFSAELQNPEGKSFYGFQIMMENIYDEVYSMVIDAYF-N 141
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWL 182
E + + + A+K D+ WI E+ + ERL+AFA EGIF SG+ A+F L
Sbjct: 142 GPENIKCYEEIKNCSHFAQKTDFINRWIKDPESLYGERLVAFAAKEGIFLSGAHAAVFAL 201
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
++GL+ GL +N I RD+G + DF+CLL++ L+ K + ++ I+ EAV+IE++ + +
Sbjct: 202 GEKGLLAGLNKANTNIYRDKGSYTDFSCLLFAHLKKKPEPKVIEKIITEAVDIEKDVLVN 261
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+ G++ A QY+E++AD LL + G KVY V+NPF++M + GK+ FFEK+V
Sbjct: 262 GMNVKEAGVDEAQTIQYVEYLADSLLLSFGNEKVYNVSNPFEFMADTTSIGKSRFFEKQV 321
Query: 303 GEYQKA 308
++ KA
Sbjct: 322 SDFIKA 327
>gi|356519286|ref|XP_003528304.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 186
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/187 (67%), Positives = 144/187 (77%), Gaps = 12/187 (6%)
Query: 55 SLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYS 114
+L+ E HFIT VLAFFAAS+ IVLENL F KE+Q+ EARAFYGFQ IENIHSE+YS
Sbjct: 5 TLSDGEHHFITLVLAFFAASNDIVLENLVGHFTKEIQLPEARAFYGFQFGIENIHSEIYS 64
Query: 115 LLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSG 174
LLLET K+S EK+RLFR T+ + KK+ WAL WID S++F ERL+AFAC+EGIFFSG
Sbjct: 65 LLLETXTKDSTEKNRLFRTINTILRITKKSQWALCWIDASKSFMERLVAFACIEGIFFSG 124
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVE 234
S+C IFWL+K LM GLTFSNELIS DEGLHCDFACLLYSLLR KLSEE V
Sbjct: 125 SYCVIFWLEKCELM-GLTFSNELISXDEGLHCDFACLLYSLLRKKLSEECV--------- 174
Query: 235 IEREFVC 241
REFVC
Sbjct: 175 --REFVC 179
>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 205
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 149/203 (73%), Gaps = 7/203 (3%)
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF A E +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 10 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 69
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + NK + ++ IV+EAV IE+EF+ ++LP
Sbjct: 70 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 127
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISLQGKTNFFE+R YQ
Sbjct: 128 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISLQGKTNFFERREANYQ 187
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K V G F ++EDF
Sbjct: 188 KGYV-----GIDNEFKFNLNEDF 205
>gi|393226483|gb|EJD34233.1| ribonucleotide reductase [Auricularia delicata TFB-10046 SS5]
Length = 316
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 187/301 (62%), Gaps = 2/301 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFIT 65
EP+L P R ++PI + E+W +YKKA + FW+ ++D + D++ W++ L +E+HF++
Sbjct: 14 EPVLLPTHYRLVLYPINFVELWVLYKKAVSFFWSVGDLDFNADVQHWDNKLNMNERHFVS 73
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LA A+S G++ EN+ RF E+Q++EAR F G Q A++N H E SL+ +++
Sbjct: 74 HILALIASSKGVIYENIVRRFACELQIAEARCFLGIQAAVQNTHLEAASLMAHILVRDPI 133
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ +F A + PCV ++A W W+D + F R++A A V G+FFSG+F ++FWL++
Sbjct: 134 QHQYVFNALDGAPCVQRRAAWIARWLDNDDLPFRMRVVALAVVGGVFFSGAFASLFWLEE 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGL+P + ISRDE LH +FAC L+ LR + V I+ EAVE+E+ + ++L
Sbjct: 194 RGLLPAVAMLVRFISRDERLHSEFACALFDELRLRPCVHVVHRIIGEAVEVEKGLLTESL 253
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P +LVG++ M QYIE VADRLL LG +Y NPF + + + FF++ G
Sbjct: 254 PVSLVGLDVKEMGQYIEHVADRLLQRLGYAALYHAFNPFAFADFAIAGQRDEFFQRSSGT 313
Query: 305 Y 305
Y
Sbjct: 314 Y 314
>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I, partial
[Homo sapiens]
Length = 172
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 138/174 (79%), Gaps = 4/174 (2%)
Query: 156 TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 215
T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 3 TYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKH 62
Query: 216 LRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGK 275
L +K SEERV+ I+ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG K
Sbjct: 63 LVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSK 122
Query: 276 VYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
V+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 123 VFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 172
>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/156 (70%), Positives = 129/156 (82%), Gaps = 1/156 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL NP RF +FPIQY ++W+MYKKAEASFWTAEEVDLS+D++ WESL DE+ FI+
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPS 120
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAER 160
E+ LF A ET+PCV KKADWALNWI + ++ ER
Sbjct: 121 EREYLFNAIETLPCVKKKADWALNWIGNQKASYGER 156
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGA-LGCGKVYGVTNPFDWMELISLQGKTNFF 298
VC P A G A E R G+ + ++Y NPFD+ME ISL+GKTNFF
Sbjct: 285 VCGRPPAAGAGF--AKTGGGAETRRGRGSGSPVASVQIYRAENPFDFMENISLEGKTNFF 342
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
EKRVGEYQ+ VM+ N F++D DF
Sbjct: 343 EKRVGEYQRMGVMAGAADN----TFRLDADF 369
>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
ANKA]
gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
berghei]
Length = 158
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/162 (68%), Positives = 128/162 (79%), Gaps = 4/162 (2%)
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKG 227
EGI FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL NKL EE V+
Sbjct: 1 EGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQN 60
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
IVKEAVE+ER F+C++LPC L+GMN LMSQYIEFVADRLL LGC KV+ NPF+WM+
Sbjct: 61 IVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMD 120
Query: 288 LISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
LISLQGKTNFFEKRV +YQK+ VM+ VF ++ DF
Sbjct: 121 LISLQGKTNFFEKRVADYQKSGVMAQRK----EQVFSLNTDF 158
>gi|17567153|ref|NP_508269.1| Protein F19G12.2 [Caenorhabditis elegans]
gi|351001563|emb|CCD69733.1| Protein F19G12.2 [Caenorhabditis elegans]
Length = 668
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 149/211 (70%), Gaps = 3/211 (1%)
Query: 103 IAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERL 161
IA+ENIHSEMY+ LLE YI++ E++ LF A T + KADW L WI D + F+ERL
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERL 504
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRNKL 220
AFA VEGIFFS SF AIFWLKKRGL+PGLT SNELIS LH + ++L R K
Sbjct: 505 AAFAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELISM-FLLHPNCFFSTFNLQRRRKP 563
Query: 221 SEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
+E R+ I+ E+V +E++FV ++LP L+GMN +M +Y+EFVAD LL LG K Y
Sbjct: 564 AESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYNTK 623
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
NPFD+ME IS++GKTNFFEKRV EYQ+ +M
Sbjct: 624 NPFDFMENISIEGKTNFFEKRVSEYQRPEMM 654
>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 102/112 (91%), Positives = 109/112 (97%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MPSIPEEPLL PNPDRFCMFPIQYPE+WEMYKKAEASFWTAEEVDLSQD RQWE+LT+DE
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWENLTSDE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEM 112
KHFI+H+LAFFAASDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSE+
Sbjct: 61 KHFISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEI 112
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/115 (88%), Positives = 108/115 (93%)
Query: 215 LLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCG 274
LLRNKLSEERVK IV ++V+IEREFVCDALPCALVGMN ALMSQYIEFVADRLLGALG G
Sbjct: 113 LLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFVADRLLGALGYG 172
Query: 275 KVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
K+Y V+NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNG+G HVFKMDEDF
Sbjct: 173 KMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGDGDTHVFKMDEDF 227
>gi|367007080|ref|XP_003688270.1| hypothetical protein TPHA_0N00550 [Tetrapisispora phaffii CBS 4417]
gi|357526578|emb|CCE65836.1| hypothetical protein TPHA_0N00550 [Tetrapisispora phaffii CBS 4417]
Length = 360
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 197/330 (59%), Gaps = 13/330 (3%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD-EKHFI 64
+E +L N RF +FPI++ EI++ YKK EA FWTAEE+DL QD WE D EKH +
Sbjct: 38 DETILFENKRRFVLFPIRFHEIFDAYKKREALFWTAEEIDLKQDCVDWEDKLGDKEKHSM 97
Query: 65 THVLAFFAAS---DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
VLA FAAS + + E L+A EVQ EA+ FYGFQI ++N+H E+YSL++++++
Sbjct: 98 KRVLAVFAASVLSELKLTETLSA----EVQTPEAKCFYGFQIMVDNVHEEVYSLVIDSFV 153
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
N DE +F E +K +A W D S F E+L+AFA ++ +F S+ ++F
Sbjct: 154 TNKDELEVMFDGIEEDEISQEKIAFAKRWFDVSNALFGEKLVAFAAIQSLFSLNSYASLF 213
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIE-REF 239
++KR L+PGL+ +N + +D + +F L+++ L+NK+++E V+ IV EAV IE R
Sbjct: 214 SMQKRRLLPGLSKANVTMFKDHSIRTEFQFLMFNHLKNKINKEIVQRIVIEAVNIEKRAL 273
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+++ +G++ LM + IE+VAD +L G K + +NP+D+++ S F+
Sbjct: 274 RKNSMSFKQLGLDIKLMEELIEYVADIILEGFGNDKFHKTSNPYDFIDTDSFPNACYSFQ 333
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
K++ K ++ N + N F ++DF
Sbjct: 334 KKIAHMNKPTI-DEPNTDISN--FSFNDDF 360
>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 15/327 (4%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEAS-FWTAEEVD--LSQDIRQWESLTADEKHF 63
E +L+ NP RF +FPIQYP++WE+YKK AS W+ E+ D + DI + + + F
Sbjct: 15 EEILSENPHRFTLFPIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDISKLSEICNSDHSF 74
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I +LAF A + NL F K++Q+ EA+ F+GF++A++NIH EMY L E +
Sbjct: 75 IKIILAFLVA-NCKQKTNLWGAF-KDIQILEAKHFHGFRLAMKNIHYEMYCNLFEILTEE 132
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ E+S L + + KK+ + W++ F+ERLI C+E IF S SF +IFWLK
Sbjct: 133 T-ERSELIE--KMINSTMKKSQYTKKWLNSDNLFSERLIGLVCIEQIFLSASFFSIFWLK 189
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRN-KLSEERVKGIVKEAVEIEREFVCD 242
KRGLM LT SN+LI RDE H +F LYS L++ KL + V +VKEAV+IE+EF+
Sbjct: 190 KRGLMSALTISNDLIFRDEEFHSNFLYSLYSNLKHSKLPQTLVHSLVKEAVDIEKEFIT- 248
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
+LP L+ ++ M QY+E V+D +L + G K++ N W++ + L K+ FF K +
Sbjct: 249 SLPTELIELDRNSMYQYVEVVSDNILISFGYEKLFHTENQCSWIQDM-LMNKSGFFWK-I 306
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDEDF 329
G +S+ + N+ K+DEDF
Sbjct: 307 GLESYSSIP---HFPTINNELKLDEDF 330
>gi|14970916|emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus
granularis]
Length = 141
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 119/141 (84%), Gaps = 1/141 (0%)
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIAIENIHSEMYSLL++ YIK++
Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQIAEARCFYGFQIAIENIHSEMYSLLIDAYIKDAV 60
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+PCV KKA WAL+WI S F R++AFA VEGIFFSGSF AIFWLKK
Sbjct: 61 QRDYLFNAVETMPCVTKKAQWALDWISSDSADFGTRIVAFAAVEGIFFSGSFAAIFWLKK 120
Query: 185 RGLMPGLTFSNELISRDEGLH 205
RGLMPGLTFSNELISRDEGLH
Sbjct: 121 RGLMPGLTFSNELISRDEGLH 141
>gi|374986759|ref|YP_004962254.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
Length = 340
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 181/330 (54%), Gaps = 23/330 (6%)
Query: 1 MPSIPE--EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTA 58
M + PE + LL P + + P++YP+ ++ Y+ A + WT EEVDL D+ L+
Sbjct: 1 MTTAPERHKNLLDPGFE-LTLRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSP 59
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+
Sbjct: 60 GEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLD 119
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-A 165
TY+ + D+++ F A E +P + +KA++ WID ET ER LI F A
Sbjct: 120 TYLPDPDDRAAAFAAVENIPSIREKAEFCFRWIDSVDKIDRLETKDERRRFLLNLICFAA 179
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE--- 222
C+EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 180 CIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFQVVDTVREEEPELFD 239
Query: 223 ----ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYG 278
++V +++EAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 240 DELQQQVTDMLREAVEAELQFARDLCGEGLPGMNTESMRQYLECVADQRLARLGFAPVYG 299
Query: 279 VTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL ++Q TNFFE+R YQ A
Sbjct: 300 SENPFSFMELQNVQELTNFFERRASAYQVA 329
>gi|455647607|gb|EMF26549.1| ribonucleoside-diphosphate reductase [Streptomyces gancidicus BKS
13-15]
Length = 338
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + W EEVDL D+ LT +E+H I ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPEEQHLIGRLVAFFATGDSIVAN 79
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 139
Query: 141 AKKADWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D ET F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAEFCFRWMDSVETIDRLESRSDRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E +V +++EAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEELGRQVTDMLREAVEAELQFA 259
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN A M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGDGLPGMNTASMRQYLECVADQRLVRLGFAPVYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RPSAYQVA 327
>gi|398782657|ref|ZP_10546371.1| ribonucleoside-diphosphate reductase [Streptomyces auratus AGR0001]
gi|396996721|gb|EJJ07707.1| ribonucleoside-diphosphate reductase [Streptomyces auratus AGR0001]
Length = 381
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 173/309 (55%), Gaps = 22/309 (7%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YPE ++ Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 63 PMRYPEFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 122
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 123 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 182
Query: 141 AKKADWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E+ F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 183 REKAEFCFKWMDSVESIDRLESRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 242
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR--------NKLSEERVKGIVKEAVEIEREF 239
+ GL + RDE +H +FA + +R +KL E++V +++EAVE E +F
Sbjct: 243 LHGLATGTNWVFRDESMHMEFAFSVVDTVRQEEPDLFDDKL-EQQVTEMLREAVEAELQF 301
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L GMN A M +Y++ VAD+ L LG VYG NPF +MEL ++Q TNFFE
Sbjct: 302 GRDLCGDGLPGMNTASMREYLQCVADQRLQRLGFAPVYGSQNPFSFMELQNVQELTNFFE 361
Query: 300 KRVGEYQKA 308
+R YQ A
Sbjct: 362 RRASAYQVA 370
>gi|182436093|ref|YP_001823812.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces griseus
XylebKG-1]
gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces griseus
XylebKG-1]
Length = 338
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 179/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M S E+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ E
Sbjct: 1 MSSTEEKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGE 59
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNW------IDGSETFAER------LIAF-ACV 167
+ + D+++ F A E +P + +KA + W ID ET A+R LI F AC+
Sbjct: 120 LPDPDDRAAAFDAVEEIPSIREKAQFCFRWMDSVEKIDRLETKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKL 220
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R +
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDA 239
Query: 221 SEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
+++V ++KEAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 240 LQQQVTDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|440698868|ref|ZP_20881190.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
turgidiscabies Car8]
gi|440278680|gb|ELP66674.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
turgidiscabies Car8]
Length = 341
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 178/327 (54%), Gaps = 21/327 (6%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P E+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ E+
Sbjct: 5 PEKTEKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSEGER 63
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+
Sbjct: 64 HMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYL 123
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI------DGSETFAER------LIAF-ACVE 168
+ +++ F A E +P + +KA++ WI D ET A+R LI F AC+E
Sbjct: 124 PDPADRAAAFDAVENIPSIREKAEFCFRWINEVEKLDRLETQADRRRFLLNLICFAACIE 183
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE------ 222
G+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 184 GLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDQL 243
Query: 223 -ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTN 281
++V +++EAVE E +F D L GMN M QY+E VAD+ LG LG VYG N
Sbjct: 244 QQQVTDMMREAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLGRLGFAPVYGSEN 303
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKA 308
PF +MEL +Q TNFFE+R YQ A
Sbjct: 304 PFSFMELQGVQELTNFFERRPSAYQVA 330
>gi|383777025|ref|YP_005461591.1| putative ribonucleoside-diphosphate reductase small subunit
[Actinoplanes missouriensis 431]
gi|381370257|dbj|BAL87075.1| putative ribonucleoside-diphosphate reductase small subunit
[Actinoplanes missouriensis 431]
Length = 331
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 178/318 (55%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ +K A + WT EEVDL D+ LT E+H ++ ++
Sbjct: 2 LLDPGMD-LTLRPMKYPHFFDRFKDAIKNTWTVEEVDLHSDLADLAKLTPAEQHLVSRLV 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ + DE++
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDPDERA 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGS 175
F A + +P +A+KA++ WID T A+R +I F AC+EG+FF G+
Sbjct: 121 AAFAAVDNIPSIARKAEFCFKWIDSVFELRELRTKADRRAFLLNVICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R + E++V+ +
Sbjct: 181 FAYVYFLRSRGLLQGLASGTNWVFRDESMHMAFAFDVVDQVRAEEPDLFDAEMEQQVRDM 240
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAVE E +F D L + GM+ M +Y++ VADR L ALG +YG TNPF +MEL
Sbjct: 241 LAEAVECEVQFAADLLEQGVSGMSLGDMREYLQHVADRRLAALGIAPIYGSTNPFAFMEL 300
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 301 QDVQELSNFFERRVSAYQ 318
>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
Length = 340
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 141
Query: 141 AKKADWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E T A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAEFCFTWMDSVEKLDRLQTQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFA 261
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 331
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 171/321 (53%), Gaps = 23/321 (7%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YPE +E Y+ A + WT EEVDL+ D+ +T +E+H I ++
Sbjct: 2 LLDPGMD-LTLRPMRYPEFYERYRAAIRNTWTVEEVDLNSDLADLARMTPEERHLINRLV 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V EAR + Q+ E +H + Y LL+TY+ + DE+
Sbjct: 61 AFFATGDSIVANNLVLNLYQHVNAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDHDERV 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
+ F A E +P + KA++ WID F LI F AC+EG+FF G+
Sbjct: 121 KAFAAVEHIPSIRNKAEFCFRWIDSLGGLDRLESREDRRAFLLNLICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR--------NKLSEERVKG 227
F ++W + RGL+ GL + RDE +H +FA + +R +KL + V
Sbjct: 181 FAYVYWFRSRGLLSGLATGTNWVFRDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQ-VTQ 239
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+++EAVE E F D + GMN M QY+E+VAD+ L L YG NPF +ME
Sbjct: 240 MIEEAVEAELAFAADLCGDGMSGMNVEQMRQYLEYVADQRLVRLRFPVRYGTANPFAFME 299
Query: 288 LISLQGKTNFFEKRVGEYQKA 308
L +Q NFFE+RV YQ A
Sbjct: 300 LQDVQELANFFERRVSAYQVA 320
>gi|441155687|ref|ZP_20966846.1| ribonucleoside-diphosphate reductase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440617882|gb|ELQ80969.1| ribonucleoside-diphosphate reductase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 354
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 36 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 95
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 96 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 155
Query: 141 AKKADWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D ET F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 156 REKAEFCFKWMDSVETIDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 215
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R ++ E +V ++KEAVE E +F
Sbjct: 216 LHGLATGTNWVFRDETMHMNFAFSVVDTVREEEPDLFDEELERQVTDMLKEAVEAELQFG 275
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M +Y++ VAD+ L LG VYG NPF +MEL ++Q TNFFE+
Sbjct: 276 RDLCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVYGSENPFSFMELQNVQELTNFFER 335
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 336 RASAYQVA 343
>gi|411004498|ref|ZP_11380827.1| ribonucleoside-diphosphate reductase [Streptomyces globisporus
C-1027]
Length = 339
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 177/323 (54%), Gaps = 21/323 (6%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
E+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I
Sbjct: 7 EKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIG 65
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ + D
Sbjct: 66 RLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPD 125
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFF 172
+++ F A E +P + +KA + W+D ET A+R LI F AC+EG+FF
Sbjct: 126 DRAAAFDAVEEIPSIREKAQFCFKWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFF 185
Query: 173 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERV 225
G+F ++W + RGL+ GL + RDE +H +FA + +R + E ++V
Sbjct: 186 YGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQV 245
Query: 226 KGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDW 285
++KEAVE E +F D L GMN M QY+E VAD+ L LG VYG NPF +
Sbjct: 246 TDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSENPFSF 305
Query: 286 MELISLQGKTNFFEKRVGEYQKA 308
MEL +Q TNFFE+R YQ A
Sbjct: 306 MELQGVQELTNFFERRPSAYQVA 328
>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
Length = 338
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 179/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M S ++ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ LT E
Sbjct: 1 MSSTDQKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAE 59
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI------DGSETFAER------LIAF-ACV 167
+ + D+++ F A E +P + +KA + WI D ET A+R LI F AC+
Sbjct: 120 LPDPDDRAAAFDAVEEIPSIREKAQFCFKWINEVEKLDRLETQADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDA 239
Query: 223 --ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
++V ++KEAV+ E +F D L GMN M +Y+E VAD+ L LG VYG
Sbjct: 240 LQQQVTDMLKEAVDAELQFGRDLCGDGLPGMNTESMREYLECVADQRLVRLGFAPVYGSQ 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|345009208|ref|YP_004811562.1| ribonucleotide reductase [Streptomyces violaceusniger Tu 4113]
gi|344035557|gb|AEM81282.1| ribonucleotide reductase [Streptomyces violaceusniger Tu 4113]
Length = 340
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 171/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YPE ++ Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 22 PMRYPEFYDRYRDAIKNTWTVEEVDLHSDVTDLAKLSPGEQHLIGRLVAFFATGDSIVSN 81
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 141
Query: 141 AKKADWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E F LI F AC+EG+FF G+F ++WL+ RGL
Sbjct: 142 REKAEFCFRWMDSVEKIDRLETKQDRRRFLLNLICFAACIEGLFFYGAFAYVYWLRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + + ++V ++KEAVE E +F
Sbjct: 202 LHGLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFA 261
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN A M +Y++ VAD+ L LG V+G NPF +MEL ++Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTASMQEYLQCVADQRLMRLGFPAVFGSENPFSFMELQNVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RASAYQVA 329
>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
Length = 339
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + W EEVDL D+ LT E+H I ++AFFA D IV
Sbjct: 21 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPGEQHLIGRLVAFFATGDSIVAN 80
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 81 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 140
Query: 141 AKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 141 REKAEFCFTWMDSVEKLDRLETRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E++V +++EAVE E +F
Sbjct: 201 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFA 260
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 261 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 320
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 321 RPSAYQVA 328
>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 341
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 177/328 (53%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
+P + + LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ E
Sbjct: 4 LPVMSTQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAE 62
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 63 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 122
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACV 167
+ + ++++ F A E +P + +KA + W+D ET A+R LI F AC+
Sbjct: 123 LPDPEDRTAAFAAVENIPSIREKASFCFKWMDSVEKLDRLETQADRRRFLLNLICFAACI 182
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 183 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQ 242
Query: 223 --ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
+ V +++EAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 243 LRQEVTDMLREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSE 302
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 NPFSFMELQGVQELTNFFERRPSAYQVA 330
>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
avermitilis MA-4680]
gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces avermitilis MA-4680]
Length = 338
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 178/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M S + LL P + + P++YP+ +E Y+ A + WT EEVDL D+ LT E
Sbjct: 1 MMSSETKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAE 59
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI------DGSETFAER------LIAF-ACV 167
+ + ++++ F A E +P + +KA++ WI D ET A+R LI F AC+
Sbjct: 120 LPDPEDRTAAFAAVENIPSIREKAEFCFKWINEVEKLDRLETKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDE 239
Query: 223 --ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
++V +++EAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 240 LQQQVTDMLREAVEAELQFGRDLCGDGLPGMNTESMRQYLECVADQRLQRLGFAPVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRASAYQVA 327
>gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
Length = 338
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 179/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M + ++ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ E
Sbjct: 1 MSTTEDKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGE 59
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACV 167
+ + D+++ F A E +P + +KA + W+D ET A+R LI F AC+
Sbjct: 120 LPDPDDRAAAFDAVEEIPSIREKAQFCFKWMDSVEKIERLETKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS------ 221
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R +
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDE 239
Query: 222 -EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
+++V ++KEAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 240 LQQQVTDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
Length = 356
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT E+H I ++AFFA D IV
Sbjct: 38 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHMIGRLVAFFATGDSIVSN 97
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 98 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFDAVEEIPSI 157
Query: 141 AKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 158 REKAQFCFKWMDSVEKIERLETAADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 217
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V ++KEAVE E +F
Sbjct: 218 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFG 277
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M +Y+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 278 RDLCGDGLPGMNTDSMREYLECVADQRLVRLGFPPVYGSQNPFSFMELQGVQELTNFFER 337
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 338 RPSAYQVA 345
>gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|359149120|ref|ZP_09182184.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. S4]
gi|421744323|ref|ZP_16182311.1| ribonucleotide reductase, beta subunit [Streptomyces sp. SM8]
gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|406687275|gb|EKC91308.1| ribonucleotide reductase, beta subunit [Streptomyces sp. SM8]
Length = 350
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 32 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHLIGRLVAFFATGDSIVAN 91
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + +++ F A E +P +
Sbjct: 92 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRADAFAAVENIPSI 151
Query: 141 AKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E+ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 152 REKAEFCFRWMDSVDKLDQLESQADRRKFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 211
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V ++KEAVE E +F
Sbjct: 212 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFA 271
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M +Y+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 272 RDLCGDGLPGMNTESMREYLECVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 331
Query: 301 RVGEYQKA 308
RV YQ A
Sbjct: 332 RVSAYQVA 339
>gi|408680594|ref|YP_006880421.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
Length = 338
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 188/349 (53%), Gaps = 31/349 (8%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M + E+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ LT E
Sbjct: 1 MSTNDEKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGE 59
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNW------IDGSETFAER------LIAF-ACV 167
+ + ++++ F A E +P + +KA + W ID ET A+R LI F AC+
Sbjct: 120 LPDPEDRAAAFAAVENIPSIREKAQFCFRWMDSVEKIDRLETQADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDA 239
Query: 223 --ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
++V ++KEAVE E +F D L GMN M +Y++ VAD+ L LG VYG
Sbjct: 240 LRQQVTDMLKEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
NPF +MEL +Q TNFFE+R YQ A V S++ +DEDF
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA-VEGSVD---------LDEDF 338
>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
Length = 341
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 178/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
+P + LL P + + P++YP+ +E Y+ A + W EEVDL D+ L+ +E
Sbjct: 4 LPVKTTKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPEE 62
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 63 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 122
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACV 167
+ + D+++ F A E +P + +KA++ W+D ET A+R LI F AC+
Sbjct: 123 LPDPDDRAAAFAAVENIPSIREKAEFCFRWMDSVEKLDRLETQADRRRFLLNLICFAACI 182
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 183 EGLFFYGAFAYVYWFRGRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEQ 242
Query: 223 --ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
++V +++EAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 243 LGQQVTAMLREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLVRLGFAPVYGSE 302
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 NPFSFMELQGVQELTNFFERRPSAYQVA 330
>gi|443624323|ref|ZP_21108797.1| putative Ribonucleoside-diphosphate reductase, beta subunit
[Streptomyces viridochromogenes Tue57]
gi|443342237|gb|ELS56405.1| putative Ribonucleoside-diphosphate reductase, beta subunit
[Streptomyces viridochromogenes Tue57]
Length = 337
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT E+H I ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 138
Query: 141 AKKADWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLQQQVTDMLREAVEAELQFA 258
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 259 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|365866748|ref|ZP_09406352.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces sp. W007]
gi|364003827|gb|EHM24963.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces sp. W007]
Length = 338
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSPGEQHMIGRLVAFFATGDSIVSN 79
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFDAVEEIPSI 139
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAQFCFKWMDSVEKIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E++V +++EAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALEQQVTDMLREAVEAELQFG 259
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RPSAYQVA 327
>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
Length = 345
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 176/332 (53%), Gaps = 26/332 (7%)
Query: 2 PSIPEEP-----LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL 56
P++PE+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L
Sbjct: 4 PTLPEQKKRHQNLLDPGFE-LTLRPMRYPDFYERYRNAIKNTWTVEEVDLHSDVADLAKL 62
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
T E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET------------FAERLIAF 164
L+TY+ + D+++ F A E +P + +KA++ WID E F LI F
Sbjct: 123 LDTYLPDPDDRADAFAAVENIPSIREKAEFCFKWIDEVEKIDRLESKADRRRFLLNLICF 182
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-- 221
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 222 -----EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
E+ VK ++ AV E +F D L GMN M +Y++ VAD+ L LG V
Sbjct: 243 FDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMNTESMREYLQCVADQRLQRLGFAPV 302
Query: 277 YGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
YG +NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 YGSSNPFSFMELQGVQELTNFFERRPSAYQVA 334
>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
Length = 339
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 177/324 (54%), Gaps = 21/324 (6%)
Query: 5 PEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFI 64
P + LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I
Sbjct: 6 PTKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVPDLAKLSPGEQHLI 64
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ +
Sbjct: 65 GRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDP 124
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIF 171
++++ F A E +P + +KA + W+D ET A+R LI F AC+EG+F
Sbjct: 125 EDRNAAFAAVENIPSIREKAQFCFRWMDSVEKLDQLETQADRRRFLLNLICFAACIEGLF 184
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ER 224
F G+F ++W + RGL+ GL + RDE +H +FA + +R + E ++
Sbjct: 185 FYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQ 244
Query: 225 VKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFD 284
V ++KEAVE E +F D L GMN M +Y++ VAD+ L LG VYG NPF
Sbjct: 245 VTDMLKEAVEAELQFSRDLCGDGLPGMNTESMREYLQCVADQRLARLGFAPVYGSENPFS 304
Query: 285 WMELISLQGKTNFFEKRVGEYQKA 308
+MEL +Q TNFFE+R YQ A
Sbjct: 305 FMELQGVQELTNFFERRPSAYQVA 328
>gi|386383363|ref|ZP_10068865.1| Ribonucleoside-diphosphate reductase [Streptomyces tsukubaensis
NRRL18488]
gi|385669178|gb|EIF92419.1| Ribonucleoside-diphosphate reductase [Streptomyces tsukubaensis
NRRL18488]
Length = 342
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 181/333 (54%), Gaps = 27/333 (8%)
Query: 1 MPSIPEEP-----LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES 55
MP+ PE P LL P + + P++YP+ +E Y+ A + WT EEVDL D+
Sbjct: 1 MPT-PETPARVQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK 58
Query: 56 LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSL 115
LT E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y
Sbjct: 59 LTPGEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLT 118
Query: 116 LLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSE------TFAER------LIA 163
LL+TY+ + ++++ F A E +P + +KA + W+D E T A+R LI
Sbjct: 119 LLDTYLPDPEDRTAAFAAVENIPSIREKAQFCFRWMDQVEKLDQLDTQADRRRFLLNLIC 178
Query: 164 F-ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE 222
F AC+EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 179 FAACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPE 238
Query: 223 -------ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGK 275
++V ++KEAVE E +F D L GMN M +Y++ VAD+ L LG
Sbjct: 239 LFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRLVRLGFAP 298
Query: 276 VYGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
VYG NPF +MEL +Q TNFFE+R YQ A
Sbjct: 299 VYGSENPFSFMELQGVQELTNFFERRPSAYQVA 331
>gi|408529356|emb|CCK27530.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
davawensis JCM 4913]
Length = 337
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT E+H I ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAVENIPSI 138
Query: 141 AKKADWALNWI------DGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + WI D E+ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAGFCFKWINEVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLREAVEAELQFA 258
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 259 RDLCGDGLPGMNTDSMRQYLECVADQRLSRLGFAPVYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|383650825|ref|ZP_09961231.1| Ribonucleoside-diphosphate reductase [Streptomyces chartreusis NRRL
12338]
Length = 335
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 17 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVAFFATGDSIVAN 76
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 77 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 136
Query: 141 AKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 137 REKAGFCFKWMDSVEQLDRLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 196
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 197 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLRQQVTDMLREAVEAELQFA 256
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 257 RDLCGDGLPGMNTESMRQYLECVADQRLSRLGFAPVYGSENPFSFMELQGVQELTNFFER 316
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 317 RPSAYQVA 324
>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum So ce56]
gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum So ce56]
Length = 339
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 166/306 (54%), Gaps = 20/306 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P+ YP +EMY+ A + WT EEVD S D+ +T E+H + ++AFFA D IV
Sbjct: 21 PMAYPAFFEMYRSAIKNTWTVEEVDFSTDVGDLRKMTDAERHLVQRLVAFFATGDSIVAN 80
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL + + EAR + Q+ E +H + Y LL+TYI + +++ R F A E +P +
Sbjct: 81 NLVLNLYRHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPEDRHRAFAAVENIPSI 140
Query: 141 AKKADWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KAD+ + W+D E T AER LI F ACVEG+FF G+F +++L+ RGL
Sbjct: 141 RQKADFCMRWLDSVESLGRLDTRAERRRFLLNLICFAACVEGLFFFGAFAYVYFLRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVK-------EAVEIEREFV 240
+ GL + RDE H FA + S R + E G+ + EA+ E F
Sbjct: 201 LHGLAAGTSWVFRDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFA 260
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L + GM+ + +Y+EF AD+ L LG K YG NPF +M+L +Q TNFFE+
Sbjct: 261 EDLLGAGVAGMSARDVRRYLEFCADQRLATLGMPKRYGAKNPFSFMDLQDVQEVTNFFER 320
Query: 301 RVGEYQ 306
RV YQ
Sbjct: 321 RVSAYQ 326
>gi|357401660|ref|YP_004913585.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337768069|emb|CCB76782.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 342
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 24 PMRYPDFYERYRNAIKNNWTVEEVDLHSDVADLAKLSPGEQHLIGRLVAFFATGDSIVAN 83
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 84 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 143
Query: 141 AKKADWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E T AER LI F AC+EG+FF G+F ++W + RGL
Sbjct: 144 REKAQFCFRWMDSVEEIDRLRTKAERRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 203
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H DFA + +R + + ++V +++EAVE E +F
Sbjct: 204 LHGLATGTNWVFRDESMHMDFAFQVVDTVRAEEPDLFDEEMGKQVTAMLEEAVEAELQFA 263
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M Y+E VAD+ L LG YG NPF +MEL ++Q TNFFE+
Sbjct: 264 RDLCGDGLPGMNTESMRAYLECVADQRLVRLGLPVRYGSQNPFSFMELQNVQELTNFFER 323
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 324 RASAYQVA 331
>gi|418471848|ref|ZP_13041638.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicoflavus ZG0656]
gi|371547525|gb|EHN75895.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicoflavus ZG0656]
Length = 343
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + W EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V +++EAVE E +F
Sbjct: 205 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLREQVTDMLREAVEAELQFA 264
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 265 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RPSAYQVA 332
>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces sp. Tu6071]
gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces sp. Tu6071]
Length = 345
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 179/332 (53%), Gaps = 26/332 (7%)
Query: 2 PSIPEEP-----LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL 56
P++PE+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L
Sbjct: 4 PTLPEQKKRNQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKL 62
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
T E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET------------FAERLIAF 164
L+TY+ + D+++ F A E +P + KA++ WID E F LI F
Sbjct: 123 LDTYLPDPDDRAAAFAAVENIPSIRAKAEFCFKWIDEVEKIDRLESRSDRRRFLLNLICF 182
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRN---KL 220
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +L
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 221 SEERVKGIVKE----AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
+++++ VKE AV+ E +F D L GMN M +Y++ VAD+ L LG V
Sbjct: 243 FDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMNTESMREYLQCVADQRLVRLGFSPV 302
Query: 277 YGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
YG +NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 YGSSNPFSFMELQGVQELTNFFERRPSAYQVA 334
>gi|386357723|ref|YP_006055969.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365808231|gb|AEW96447.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 340
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRNAIKNNWTVEEVDLHSDVADLAKLSPGEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 141
Query: 141 AKKADWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E T AER LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAQFCFRWMDSVEEIDRLRTKAERRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR----NKLSEE---RVKGIVKEAVEIEREFV 240
+ GL + RDE +H DFA + +R + EE +V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDESMHMDFAFQVVDTVRAEEPDLFDEEMGKQVTAMLEEAVEAELQFA 261
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M Y+E VAD+ L LG YG NPF +MEL ++Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTESMRAYLECVADQRLVRLGLPVRYGSQNPFSFMELQNVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RASAYQVA 329
>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
Length = 345
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 179/332 (53%), Gaps = 26/332 (7%)
Query: 2 PSIPEEP-----LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL 56
P++PE+ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L
Sbjct: 4 PTLPEQKKRNQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKL 62
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
T E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET------------FAERLIAF 164
L+TY+ + D+++ F A E +P + KA++ WID E F LI F
Sbjct: 123 LDTYLPDPDDRAAAFAAVENIPSIRAKAEFCFKWIDEVEKIDRLESQSDRRRFLLNLICF 182
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRN---KL 220
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +L
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 221 SEERVKGIVKE----AVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
+++++ VKE AV+ E +F D L GMN M +Y++ VAD+ L LG V
Sbjct: 243 FDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMNTESMREYLQCVADQRLVRLGFSPV 302
Query: 277 YGVTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
YG +NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 YGSSNPFSFMELQGVQELTNFFERRPSAYQVA 334
>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 343
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ ++ Y+ A + WT EEVDL D+ L+ E+H I+ ++AFFA D IV
Sbjct: 25 PMRYPQFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMISRLVAFFATGDSIVSN 84
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAASFAAVENIPSI 144
Query: 141 AKKADWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVEKIDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E +V ++KEAVE E +F
Sbjct: 205 LHGLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFA 264
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M Y+E VAD+ L LG V+G NPF +MEL +Q TNFFE+
Sbjct: 265 HDLCGDGLPGMNTESMRAYLECVADQRLARLGFPAVFGSENPFSFMELQDVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RASAYQVA 332
>gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
Length = 343
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + W EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V +++EAVE E +F
Sbjct: 205 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFA 264
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 265 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RPSAYQVA 332
>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces coelicolor A3(2)]
gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
Length = 343
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + W EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V +++EAVE E +F
Sbjct: 205 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFA 264
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 265 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RPSAYQVA 332
>gi|386842422|ref|YP_006247480.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374102723|gb|AEY91607.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451795715|gb|AGF65764.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 337
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT +E+H I ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 138
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W ID +T A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWINEVEKIDRLDTKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + +++V ++ EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLQQQVTDMLHEAVEAELQFA 258
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY++ VAD+ L LG YG NPF +MEL +Q TNFFE+
Sbjct: 259 HDLCGDGLPGMNTDSMRQYLQCVADQRLTRLGFAPRYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 340
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 81
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVENIPSI 141
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKASFCFKWMDSVESIDRLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V ++KEAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFG 261
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M +Y++ VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
Length = 355
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 37 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSEGEQHMIGRLVAFFATGDSIVAN 96
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++ F A E +P +
Sbjct: 97 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRVAAFAAVENIPSI 156
Query: 141 AKKADWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 157 REKAEFCFKWMDSVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 216
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R ++L ++V ++KEAVE E +F
Sbjct: 217 LHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFG 276
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 277 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 336
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 337 RPSAYQVA 344
>gi|429196106|ref|ZP_19188092.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
ipomoeae 91-03]
gi|428668184|gb|EKX67221.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
ipomoeae 91-03]
Length = 340
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 141
Query: 141 AKKADWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAQFCFTWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + +++V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDRLQQQVTDMLREAVEAELQFA 261
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|395771544|ref|ZP_10452059.1| ribonucleoside-diphosphate reductase [Streptomyces acidiscabies
84-104]
Length = 338
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 178/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
M + ++ LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+ +E
Sbjct: 1 MTTEAQKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSPEE 59
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI------DGSETFAER------LIAF-ACV 167
+ + D+++ F A E +P + +KA++ WI D +T A+R LI F AC+
Sbjct: 120 LPDPDDRTAAFAAVENIPSIREKAEFCFKWINEVEKLDSLQTKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKL 220
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R ++
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPDLFDET 239
Query: 221 SEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
++ V ++ EAVE E +F D L GMN M Y+E VAD+ L LG VYG
Sbjct: 240 LQKEVTDMLAEAVEAELQFARDLCGEGLPGMNTESMRAYLECVADQRLVRLGFAPVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|456388970|gb|EMF54410.1| nrdM protein [Streptomyces bottropensis ATCC 25435]
Length = 337
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSEGEQHMIGRLVAFFATGDSIVAN 78
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++ F A E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRVAAFAAVENIPSI 138
Query: 141 AKKADWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + L +++V ++KEAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPDLFDDLLQQQVTDMLKEAVEAELQFG 258
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 259 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
Length = 340
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 177/330 (53%), Gaps = 23/330 (6%)
Query: 1 MPSIPEEP--LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTA 58
MP + E LL P + + P++YP+ +E Y+ A + WT EEVDL D+ L+
Sbjct: 1 MPVMTSEAKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAKLSP 59
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+
Sbjct: 60 AEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLD 119
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWI------DGSETFAER------LIAF-A 165
TY+ + +++ F A E +P + +KA++ WI D E+ A+R LI F A
Sbjct: 120 TYLPDPQDRAAAFDAVENIPSIREKAEFCFRWINEVEKLDRLESQADRRRFLLNLICFAA 179
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE--- 222
C+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 180 CIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFD 239
Query: 223 ----ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYG 278
++V ++ EAVE E +F D L GMN M QY+E VAD+ L LG VYG
Sbjct: 240 DRLQQQVTDMLAEAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYG 299
Query: 279 VTNPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 SENPFSFMELQGVQELTNFFERRPSAYQVA 329
>gi|345848582|ref|ZP_08801602.1| Ribonucleoside-diphosphate reductase [Streptomyces zinciresistens
K42]
gi|345639927|gb|EGX61414.1| Ribonucleoside-diphosphate reductase [Streptomyces zinciresistens
K42]
Length = 337
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 169/309 (54%), Gaps = 22/309 (7%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT +E H I ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEHHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + +++ F A E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPRDRAAAFDAVENIPSI 138
Query: 141 AKKADWALNWI------DGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + WI D E+ ++R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAGFCFKWINEVEKLDRLESRSDRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR--------NKLSEERVKGIVKEAVEIEREF 239
+ GL + RDE +H FA + +R ++L EE V +++EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDRLREE-VTDMLREAVEAELQF 257
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L GMN M QY+E VAD+ L LG VYG NPF +MEL +Q TNFFE
Sbjct: 258 ARDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFE 317
Query: 300 KRVGEYQKA 308
+R YQ A
Sbjct: 318 RRPSAYQVA 326
>gi|408826315|ref|ZP_11211205.1| ribonucleoside-diphosphate reductase [Streptomyces somaliensis DSM
40738]
Length = 339
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 182/346 (52%), Gaps = 34/346 (9%)
Query: 8 PLLTPN---PD-RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHF 63
P TPN P + P++YP+ +E Y+ A + WT EEVDL D+ LT E+H
Sbjct: 4 PTRTPNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGEQHL 63
Query: 64 ITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKN 123
I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ +
Sbjct: 64 IGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPD 123
Query: 124 SDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGI 170
++++ F A E +P + +KA + W+D ET A+R LI F AC+EG+
Sbjct: 124 PEDRTAAFAAVENIPSIREKAAFCFRWMDSVEKLDRLETKADRRRFLLNLICFAACIEGL 183
Query: 171 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------E 223
FF G+F ++W + RGL+ GL + RDE +H FA + +R + +
Sbjct: 184 FFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMGFAFEVVDTVRKEEPDLFDDELGR 243
Query: 224 RVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPF 283
+V ++KEAVE E +F D L GMN M Y+E VAD+ L LG VYG NPF
Sbjct: 244 QVADMLKEAVEAELQFARDLCGDGLPGMNTESMRAYLECVADQRLTRLGLTPVYGSENPF 303
Query: 284 DWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+MEL +Q TNFFE+R YQ A V S++ +DEDF
Sbjct: 304 AFMELQGVQELTNFFERRPSAYQVA-VEGSVD---------LDEDF 339
>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
Length = 347
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 177/329 (53%), Gaps = 30/329 (9%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + W EEVDL D+ LT E+H I ++AFFA D IV
Sbjct: 29 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPAERHLIGRLVAFFATGDSIVAN 88
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 89 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 148
Query: 141 AKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W+D ET ++R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 149 REKAEFCFRWMDSVERLDRLETRSDRRRFLLNLICFAACIEGLFFYGAFAYVYWFRGRGL 208
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNK----LSEE---RVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + EE +V +++EAVE E +F
Sbjct: 209 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFA 268
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY++ VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 269 RDLCGDGLPGMNTESMRQYLQCVADQRLVRLGFAPVYGSENPFSFMELQGVQELTNFFER 328
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
R YQ A + G+ G DEDF
Sbjct: 329 RASAYQVA-----VEGSVG-----FDEDF 347
>gi|453055152|gb|EMF02599.1| ribonucleoside-diphosphate reductase [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 340
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 173/329 (52%), Gaps = 30/329 (9%)
Query: 10 LTPNPDR----------FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD 59
+T PDR + P++YP+ ++ Y+ A + WT EEVDL D+ L+
Sbjct: 1 MTTAPDRQKNLLDPGFELTLRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPG 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+H I ++AFFA D IV NL K + EAR + Q+ E +H + Y LL+T
Sbjct: 61 EQHMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET------------FAERLIAF-AC 166
Y+ + +E++ F A E +P + KA + W+D E F LI F AC
Sbjct: 121 YLPDPEERAAAFAAVENIPSIRDKAQFCFKWMDSVEKIDKLESKADRRRFLLNLICFAAC 180
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS----- 221
+EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R +
Sbjct: 181 IEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRQEEPDLFDD 240
Query: 222 --EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
+++V ++KEAVE E +F D L GMN M +Y++ VAD+ L LG VYG
Sbjct: 241 ELQQQVTDMLKEAVEAELQFGRDLCGEGLPGMNTESMREYLQCVADQRLQRLGFAPVYGS 300
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL ++Q TNFFE+R YQ A
Sbjct: 301 ENPFSFMELQNVQELTNFFERRASAYQVA 329
>gi|386839868|ref|YP_006244926.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374100169|gb|AEY89053.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451793162|gb|AGF63211.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 337
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT +E+H I ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + D+++ F A E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 138
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W ID ++ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWINEVEKIDRLDSKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + +++V ++ EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLQQQVTDMLHEAVEAELQFA 258
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY++ VAD+ L LG YG NPF +MEL +Q TNFFE+
Sbjct: 259 HDLCGDGLPGMNTDSMRQYLQCVADQRLTRLGFAPRYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
Length = 342
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 177/318 (55%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP+ ++ +K A + WT EEVDL D+ L+ E+H ++ ++
Sbjct: 13 LLDPGMD-LTLRPMRYPQFFDRFKDAIRNTWTVEEVDLHADLADLAKLSPAEQHLVSRLV 71
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + + E R + Q+ E +H + Y LL+TY+ + ++
Sbjct: 72 AFFATGDTIVANNLVLNLYQHINSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKQRY 131
Query: 129 RLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGS 175
F A E +P +A+KA++ WID +T A+R LI F AC+EG+FF G+
Sbjct: 132 EAFAAVENIPSIARKAEFCFKWIDSIFELRELKTRADRRAFLLNLICFAACIEGLFFYGA 191
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGI 228
F +++L+ RG++ GL + RDE +H FA + +R + E++V+ +
Sbjct: 192 FAYVYFLRSRGVLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDM 251
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAV+ E +F D L + GM A M QY++ VADR L LG +YG TNPF +MEL
Sbjct: 252 LAEAVDCEVQFAADLLEQGVSGMPLADMRQYLQHVADRRLAMLGIAPMYGSTNPFAFMEL 311
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 312 QDVQELSNFFERRVSAYQ 329
>gi|291303011|ref|YP_003514289.1| ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
Length = 338
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 178/341 (52%), Gaps = 31/341 (9%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP+ +E ++ A + WT EEVDL+ D+ + T E+H I ++
Sbjct: 9 LLDPGMD-LTLRPMRYPDFYEQFRAAIRNTWTVEEVDLASDLPDLATFTDSERHLINRLV 67
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL K V EAR + Q+ E +H + Y LL+TY+ + +++
Sbjct: 68 AFFATGDTIVANNLVLNLYKHVNAPEARLYLSRQLYEEAVHVQFYLTLLDTYLPDPEDRV 127
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAE------------RLIAF-ACVEGIFFSGS 175
+ F A E +P + +KA++ WID + E LI F AC+EG+FF G+
Sbjct: 128 KAFAAVEHIPSIKEKAEFCFKWIDTIDQLDELRTPEDRRAFLLNLICFAACIEGLFFYGA 187
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGI 228
F ++WL+ RGL+ GL + RDE H +FA + ++RN+ E E V +
Sbjct: 188 FAYVYWLRSRGLLDGLATGTNWVFRDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRM 247
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
++EAV E +F D + GM M Y+E+VAD+ L LG YG NPF +M L
Sbjct: 248 IEEAVAAELQFARDLCGEGMPGMTVNDMKSYLEYVADQRLTRLGMPVRYGSKNPFGFMAL 307
Query: 289 ISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+Q TNFFE+R YQ A GG +DEDF
Sbjct: 308 QDVQELTNFFERRPTAYQVAV--------GG--TVDLDEDF 338
>gi|345001978|ref|YP_004804832.1| ribonucleoside-diphosphate reductase [Streptomyces sp. SirexAA-E]
gi|344317604|gb|AEN12292.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SirexAA-E]
Length = 340
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVSN 81
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAVEEIPSI 141
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAQFCFKWMDSVEEIDRLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFG 261
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG +YG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGEGLPGMNTESMRQYLECVADQRLTRLGFPALYGSENPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|255724184|ref|XP_002547021.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
gi|240134912|gb|EER34466.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
Length = 252
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 122/163 (74%), Gaps = 2/163 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL N R+ MFPI+Y EIW YKKAEASFWT EEVDLS+D+ W + L +E++F+
Sbjct: 89 EEPLLQENKRRYVMFPIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKLNDNERYFV 148
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ EA++FYGFQI +ENIHSEMYSLL+ETY+K+
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVKDP 208
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFAC 166
E LF A E +PC+ KKA+WA+ WI D +AERL+AF C
Sbjct: 209 QEADFLFNAIENIPCITKKAEWAIKWIQDKDALYAERLVAFCC 251
>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
Length = 331
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 173/320 (54%), Gaps = 21/320 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ Y+ A + WT EEVDL D+ + L+A E+H ++ ++
Sbjct: 2 LLDPGLD-LTLRPMRYPHFFDRYRDAIKNTWTVEEVDLHSDLTDLDRLSAAERHLVSRLV 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ + DE++
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEDERT 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A E +P + +KA++ WID F LI F AC+EG+FF G+
Sbjct: 121 EAFAAVENIPSIRRKAEFCFRWIDSLGNLQRLESREDRRAFLLNLICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R ++ ++V+ +
Sbjct: 181 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREM 240
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAVE E +F D L + G+ A M Y+E VADR L LG +YG NP +MEL
Sbjct: 241 LAEAVECETQFAGDLLGGGVSGLPVADMRAYLEHVADRRLEQLGLEPMYGTANPLGFMEL 300
Query: 289 ISLQGKTNFFEKRVGEYQKA 308
+Q +NFFE+RV YQ A
Sbjct: 301 QDVQELSNFFERRVSAYQVA 320
>gi|452819014|gb|EME26126.1| ribonucleotide reductase small subunit [Galdieria sulphuraria]
Length = 313
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 183/304 (60%), Gaps = 7/304 (2%)
Query: 16 RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASD 75
R+ +FPI + YK+ EAS WT+ E+D S+D+ +E L + ++ + +VLAFFA+ D
Sbjct: 5 RYSLFPIVDELSYSFYKRQEASIWTSAEMDFSRDLEDFEKLDVEVRNILMNVLAFFASGD 64
Query: 76 GIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFE 135
GIV +N++ RFM+ E AFY Q+ IE +H+E YSL++ + I++++E+++LF A E
Sbjct: 65 GIVSKNISYRFMRSAPNFEQVAFYAAQLFIETVHAETYSLIISSLIRDTEERNKLFSAGE 124
Query: 136 TVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
V K W +I D + ER++AFAC EGIFF+G+F IFW+ + M L F+
Sbjct: 125 NNLAVRSKEKWMERFIEDDTVEEWERILAFACSEGIFFTGAFAVIFWIGEMRSMQNLIFA 184
Query: 195 NELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALV--GMN 252
N IS+DE LHC+FA + LL+ +E+R I++EA E+E+EF+ +P + GM+
Sbjct: 185 NIQISKDEALHCEFA--VARLLQMDWNEDRALEIIREAAELEKEFMKAIIPDKELCYGMS 242
Query: 253 GALMSQYIEFVADRLLGALGCGKVYG--VTNPFDWMELISLQGKTNFFEKRVGEYQKASV 310
+ M YIE++A+RL L Y PF +++ K NFFE R Y++ +V
Sbjct: 243 QSKMLSYIEWMANRLCNMLEIPVAYSEVTKTPFSFVDKAVALEKINFFEVRAANYKRFNV 302
Query: 311 MSSL 314
+L
Sbjct: 303 DEAL 306
>gi|389730179|ref|ZP_10189354.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 115]
gi|388440951|gb|EIL97271.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 115]
Length = 341
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 180/331 (54%), Gaps = 28/331 (8%)
Query: 1 MPSIPEEPLLTPNPD-RFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTA 58
M + PE P +P + P++YPE +EMY+ A + WT +EVD S D S ++A
Sbjct: 1 MSTQPEHPQNILDPGFELTLRPMRYPEFYEMYRNAIKNTWTVDEVDFSLDTTDLNSKMSA 60
Query: 59 DEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLE 118
++H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+
Sbjct: 61 ADRHLIHRLIAFFATGDTIVSNNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLD 120
Query: 119 TYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-A 165
TYI + +E+++ F A E +P + K ++ WID ET A+R LI F A
Sbjct: 121 TYIPDQNERAKAFSAIENIPSIRAKGEFCFKWIDSIQDISRLETRAQRRQFLLNLICFAA 180
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEE-- 223
C+EG+FF +F +++ + RGL+ GL + RDE H FA + ++R +EE
Sbjct: 181 CIEGMFFFAAFAYVYYFRSRGLLHGLASGTNWVFRDESCHMAFA---FEVVRTVRAEEPD 237
Query: 224 --------RVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGK 275
+V+ ++++A+ E +F D L +VG++ M QY+E+ AD+ L L K
Sbjct: 238 LFDEEMRAQVEEMLEDAIACETQFAEDVLSGGVVGLSSKEMRQYLEYCADQRLAQLDLPK 297
Query: 276 VYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
YG NPFD+M+L +Q TNFFE+RV YQ
Sbjct: 298 KYGAKNPFDFMDLQDVQEVTNFFERRVSAYQ 328
>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
Length = 231
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/113 (85%), Positives = 105/113 (92%), Gaps = 1/113 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
MPS+PEEP+LTP PDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD R WE SLT D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEM 112
E+HFI HVLAFFAASDGIVLENL+ RFM +VQ+SEARAFYGFQIAIENIHSE+
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEI 113
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/118 (82%), Positives = 104/118 (88%), Gaps = 3/118 (2%)
Query: 215 LLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCG 274
LLR K E+R+K IV +AVEIEREFVCDAL CALVGMN LMSQYIEFVADRLL ALGCG
Sbjct: 114 LLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFVADRLLAALGCG 173
Query: 275 KVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGG---NHVFKMDEDF 329
KVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSS++GN +HVFK+DEDF
Sbjct: 174 KVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSVHGNAAFNDDHVFKLDEDF 231
>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
Length = 336
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 167/319 (52%), Gaps = 22/319 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
+L P D + P++YP +EMYK + WT +EVD S D+ S +T EKH I +
Sbjct: 6 ILDPGFD-LTLRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRL 64
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K V E R + Q+ E +H + Y LL+ YI N DE+
Sbjct: 65 VAFFATGDSIVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDER 124
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSETFAE------------RLIAFA-CVEGIFFSG 174
+ F A E +P + KKAD+ WID E LI FA CVEG+FF
Sbjct: 125 AEAFAAVENIPSIKKKADFCYKWIDSINELTELNTIEDRRRFLMNLICFATCVEGLFFYA 184
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKG 227
+F +++L+ +GL+ GL + RDE +H FA + R N+ E+ V
Sbjct: 185 AFAYVYFLRSKGLLAGLASGTNWVFRDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQ 244
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
++++A+E E EF D L + G++ M QY+E+ AD+ L +L Y V NPF +ME
Sbjct: 245 MLEDAIECEMEFAHDVLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYNVKNPFIFME 304
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q NFFE+RV YQ
Sbjct: 305 LQDMQELANFFERRVSAYQ 323
>gi|357411278|ref|YP_004923014.1| ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
Length = 338
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVSN 79
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAVEEIPSI 139
Query: 141 AKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAQFCFRWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + + ++V ++KEAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFG 259
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG +YG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFPALYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RPSAYQVA 327
>gi|347756560|ref|YP_004864123.1| ribonucleotide reductase subunit beta [Candidatus
Chloracidobacterium thermophilum B]
gi|347589077|gb|AEP13606.1| Ribonucleotide reductase, beta subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 332
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 168/307 (54%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D+ S LT E+H I ++AFFA D IV
Sbjct: 13 PMKYPLFYEMYRNAVKNTWTVEEVDFSTDVADLHSRLTPAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL K + EAR + Q+ E +H + Y LL+TYI + E+ R F A +P
Sbjct: 73 NNLVLNLYKHINAPEARMYLSRQLFEEALHVQFYLTLLDTYIPDLAERERAFAAVHNIPS 132
Query: 140 VAKKADWALNWIDG------------SETFAERLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+A+KA + WID F L+ FA CVEG+FF +F +++L+ +G
Sbjct: 133 IARKAQFCQRWIDSIFLLDELHTREDRRKFLLNLLCFASCVEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREF 239
L+ GL + RDE LH +FA + +R + E + +++EAV+ E +F
Sbjct: 193 LLHGLASGTNWVFRDESLHMNFAFAVADQVRQEEPELFDDAMEAALVQMIEEAVDCEMQF 252
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ A M QY+EFVAD+ L LGC + + V NPF +M+L +Q TNFFE
Sbjct: 253 AEDLLSGGVAGLSLADMRQYLEFVADQRLARLGCERRFYVRNPFPFMDLQDVQEVTNFFE 312
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 313 RRVAAYQ 319
>gi|426403937|ref|YP_007022908.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425860605|gb|AFY01641.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 332
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 167/319 (52%), Gaps = 22/319 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
+L P D + P++YP +EMYK + WT +EVD S D+ S +T EKH I +
Sbjct: 2 ILDPGFD-LTLRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRL 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K V E R + Q+ E +H + Y LL+ YI N DE+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDER 120
Query: 128 SRLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAFA-CVEGIFFSG 174
+ F A E +P + KKAD+ WID F LI FA CVEG+FF
Sbjct: 121 AEAFAAVENIPSIKKKADFCYKWIDSINELNELKTIEDRRRFLMNLICFATCVEGLFFYA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKG 227
+F +++L+ +GL+ GL + RDE +H FA + R N+ E+ V
Sbjct: 181 AFAYVYFLRSKGLLAGLASGTNWVFRDESMHMAFAIEVVKTARREEPELFNQQMEDMVVQ 240
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
++++A+E E EF D L + G++ M QY+E+ AD+ L +L Y V NPF +ME
Sbjct: 241 MLEDAIECEMEFAHDVLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYNVKNPFIFME 300
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q NFFE+RV YQ
Sbjct: 301 LQDMQELANFFERRVSAYQ 319
>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces jumonjinensis]
Length = 322
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 167/301 (55%), Gaps = 20/301 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ LT E+H I ++AFFA D IV
Sbjct: 21 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAKLTPGEQHLIGRLVAFFATGDSIVAN 80
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 81 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVENIPSI 140
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 141 REKAQFCFKWMDSVEKIDQLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V +++EAVE E +F
Sbjct: 201 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFG 260
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M +Y++ VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 261 SDLCGDGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 320
Query: 301 R 301
R
Sbjct: 321 R 321
>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
Length = 849
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 170/310 (54%), Gaps = 41/310 (13%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWT---------------------AEEVD 45
+PLL NPDR+CMFP++ +W YKKAEAS + AE+VD
Sbjct: 557 KPLLDENPDRYCMFPLKEDRVWSQYKKAEASRPSGQAPNDPLCMAHTTFWTTFWTAEDVD 616
Query: 46 LSQDIRQWES-LTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIA 104
S D R W+ L E+ F++ VLA+ AASD ++ N+ ARFM +V+++EARAFY FQ+
Sbjct: 617 FSSDARDWQDRLAPGERSFLSSVLAYLAASDRLIQHNVVARFMIDVELAEARAFYAFQLF 676
Query: 105 IENIHSEMYSLLLETYIKNSDEK-SRLFRAFETVPCVAKKADWALNWIDGSETFAERLIA 163
+N+H+EM S +L +E+ + + R +P KA W WI+ T A L
Sbjct: 677 KKNVHTEMVSAILAALFAGKEEQLAAVLRTVLALPAFQAKAAWVRKWINRQATAAAALPP 736
Query: 164 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEE 223
G+ + +LISRDEG+H + A ++YSLLR+KL++
Sbjct: 737 LLLPRGLLPGTGH-----------------ATDLISRDEGVHVESAGVMYSLLRSKLTDS 779
Query: 224 RVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV-TNP 282
+ +GIV EAVE ER FVC LP G+ M +Y+++V DRLLGALG +Y V NP
Sbjct: 780 QAQGIVGEAVEAERAFVCGQLPLEATGLEAGAMEEYLQYVGDRLLGALGHAPLYRVAANP 839
Query: 283 FDWMELISLQ 292
W+E I+++
Sbjct: 840 LPWLEGIAMK 849
>gi|358457765|ref|ZP_09167981.1| Ribonucleoside-diphosphate reductase [Frankia sp. CN3]
gi|357079045|gb|EHI88488.1| Ribonucleoside-diphosphate reductase [Frankia sp. CN3]
Length = 331
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P+ YP ++ Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 13 PMSYPAFYDRYRAAIRNTWTVEEVDLHSDLADLHRLSPAERHLVNRLVAFFATGDTIVAN 72
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL + + EAR + Q+ E +H + Y LL+TY+ ++DE+++ F A E VP +
Sbjct: 73 NLVLNLYRHINAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDADERAQAFAAVENVPSI 132
Query: 141 AKKADWALNWID---GSETFAER---------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
KA + WID G + + R LI F AC+EG+FF G+F +++L+ RGL
Sbjct: 133 RAKAQFCFRWIDTLGGLDQLSTRADRRAFLLNLICFAACIEGLFFYGAFAYVYFLRSRGL 192
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E V+ ++ EAV+ E EF
Sbjct: 193 LHGLASGTNWVFRDESMHMEFALDVVRTIRAQEPDLVDGEFEASVRQMLAEAVDAETEFA 252
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L + GM M Y+E VADR L LG ++G NPF ++EL +Q +NFFE+
Sbjct: 253 RDLLAGGVAGMTVVDMRAYLEHVADRRLVQLGFAPMFGSANPFSFLELQDVQELSNFFER 312
Query: 301 RVGEYQKA 308
RV YQ A
Sbjct: 313 RVSAYQVA 320
>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
Length = 350
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 175/318 (55%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ +K+A + WT EEVDL D+ L+ E+H ++ ++
Sbjct: 21 LLDPGMD-LTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLADLAKLSPAERHLVSRLV 79
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ + E+
Sbjct: 80 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKERF 139
Query: 129 RLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGS 175
F A E +P +A+KA++ WID T A+R LI F AC+EG+FF G+
Sbjct: 140 AAFAAVENIPSIARKAEFCFRWIDSIFELRELRTRADRRAFLLNLICFAACIEGLFFYGA 199
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R + E ++K +
Sbjct: 200 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDM 259
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
V EAV+ E +F D L + G++ A M +Y++ VADR L LG +YG NPF +MEL
Sbjct: 260 VTEAVDCEAQFAEDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPIYGSQNPFAFMEL 319
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 320 QDVQELSNFFERRVSAYQ 337
>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
Length = 342
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 176/330 (53%), Gaps = 25/330 (7%)
Query: 1 MPSIPEEP----LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESL 56
MP P LL P D + P++YP ++ +K A + WT EEVDL D+ L
Sbjct: 1 MPVTTTAPTRHMLLDPGMD-LTLRPMRYPRFFDRFKDAIKNTWTVEEVDLHSDLADLAKL 59
Query: 57 TADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL 116
+ E+H ++ ++AFFA D IV NL + V E R + Q+ E +H + Y L
Sbjct: 60 SPAERHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNL 119
Query: 117 LETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF 164
L+TY+ + E+ F A E +P +A+KA++ WID T A+R LI F
Sbjct: 120 LDTYVPDEKERFAAFDAVENIPSIARKAEFCFRWIDSIFELRELRTRADRRAFLLNLICF 179
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR------ 217
AC+EG+FF G+F +++L+ RGL+ GL + RDE +H FA + +R
Sbjct: 180 AACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVETVRAEEPDL 239
Query: 218 -NKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
+ E +VK ++ EAVE E F D L + GM+ A M +Y++ VADR L LG +
Sbjct: 240 FDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMSLADMREYLQHVADRRLAVLGIAPM 299
Query: 277 YGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
YG NPF +MEL +Q +NFFE+RV YQ
Sbjct: 300 YGSGNPFAFMELQDVQELSNFFERRVSAYQ 329
>gi|386845602|ref|YP_006263615.1| ribonucleoside-diphosphate reductase subunit beta [Actinoplanes sp.
SE50/110]
gi|359833106|gb|AEV81547.1| ribonucleoside-diphosphate reductase beta chain [Actinoplanes sp.
SE50/110]
Length = 331
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 172/318 (54%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ +K A + WT EEVDL D+ L+ EKH ++ ++
Sbjct: 2 LLDPGMD-LTLRPMKYPHFFDRFKDAIKNTWTVEEVDLHSDLADLAVLSDAEKHLVSRLV 60
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ + E+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEAERF 120
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A E +P +A+KA++ WID F +I F AC+EG+FF G+
Sbjct: 121 EAFAAIENIPSIARKAEFCFKWIDSVFDLRRLETREHRRAFLLNVICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGI 228
F +++L+ RG++ GL + RDE +H FA + +R + +++V+ +
Sbjct: 181 FAYVYFLRSRGVLQGLASGTNWVFRDESMHMAFAFDVVDQVRREEPDLFDAEMQQQVRDM 240
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAVE E +F D L + GM+ A M +Y++ VADR L LG VYG NPF +MEL
Sbjct: 241 LAEAVECEVQFAADLLEQGVSGMSLADMREYLQHVADRRLQVLGIAPVYGSKNPFAFMEL 300
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 301 QDVQELSNFFERRVSAYQ 318
>gi|383315471|ref|YP_005376313.1| ribonucleotide reductase subunit beta [Frateuria aurantia DSM 6220]
gi|379042575|gb|AFC84631.1| ribonucleotide reductase, beta subunit [Frateuria aurantia DSM
6220]
Length = 340
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 177/345 (51%), Gaps = 30/345 (8%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD-EK 61
S P +L P + + P++YP+ +EM+K + WT EE++ DI S D E+
Sbjct: 4 STPHSHILDPGFE-LTLRPMKYPQYFEMFKNGIKNTWTVEEINFQIDISDLHSKMNDAER 62
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+ YI
Sbjct: 63 HLIYRLVAFFATGDTIVANNLVLNLYQHINAPEARMYLSRQLYEEALHIQFYLTLLDNYI 122
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVE 168
+ +E+ + F A E +P + KK D+ WID E+ A+R LI F AC+E
Sbjct: 123 PDINERQKAFAAIENIPSIKKKGDFCFKWIDSVQNLHRLESKADRKQFLLNLICFAACIE 182
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS------- 221
G+FF G+F +++L+ +GL+PGL + RDE H +FA + +R +
Sbjct: 183 GLFFYGAFSYVYYLRDKGLLPGLASGTNWVFRDESCHMEFAFDVVKTVREQEPDLFDAEL 242
Query: 222 EERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTN 281
E +V +++EA++ E F D L ++G +M QY+E+ AD LG Y V+N
Sbjct: 243 EAQVYEMLEEAIQCETAFADDVLGLGVMGFTPKMMRQYLEYCADDRFRRLGMAPKYNVSN 302
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMD 326
P WMEL +Q TNFFE+RV YQ G G F MD
Sbjct: 303 PLPWMELQDVQELTNFFERRVTAYQV--------GTQGEVAFDMD 339
>gi|357391820|ref|YP_004906661.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
Length = 339
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 173/309 (55%), Gaps = 22/309 (7%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP ++ Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 21 PMRYPSFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSEGERHMIGRLVAFFATGDSIVSN 80
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
N+ K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A E +P +
Sbjct: 81 NVVLSLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRNAAFAAVENIPSI 140
Query: 141 AKKADW------ALNWIDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
A+KA + A++ ID + +R LI F ACVEG+FF G+F ++W + RGL
Sbjct: 141 AQKAQFCFKYMNAVDHIDSLRSKEDRRAFLLNLICFAACVEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR--------NKLSEERVKGIVKEAVEIEREF 239
+ GL + RDE +H DFA + +R +K++ + V +++EAVE E +F
Sbjct: 201 LHGLATGTNWVFRDESMHMDFAFSVVDTVREEEPDLFDDKMARQ-VTEMLEEAVEAELQF 259
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L GMN M +Y++ VAD+ L LG YG TNPF +MEL ++Q TNFFE
Sbjct: 260 ARDLCGEGLPGMNTESMREYLQAVADQRLARLGLPIRYGSTNPFGFMELQNVQELTNFFE 319
Query: 300 KRVGEYQKA 308
+RV YQ A
Sbjct: 320 RRVSAYQIA 328
>gi|355717371|gb|AES05911.1| ribonucleotide reductase M2 B [Mustela putorius furo]
Length = 150
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 117/142 (82%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ++EK+FI+
Sbjct: 9 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 68
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 69 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 128
Query: 126 EKSRLFRAFETVPCVAKKADWA 147
++ LF A ET+P V KKADWA
Sbjct: 129 KREFLFNAIETMPYVKKKADWA 150
>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
Length = 348
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 168/318 (52%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP +E +K A + WT EEVDL D+ L+ E H + ++
Sbjct: 19 LLDPGMD-LTLRPMRYPHFFERFKAAIRNTWTVEEVDLHSDLADLRKLSPAEHHLVKRLV 77
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + + EAR + Q+ E +H + Y LL+TYI + E++
Sbjct: 78 AFFATGDTIVANNLVLNLYQHINSPEARLYLSRQLFEEAVHVQFYLALLDTYITDERERA 137
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A E +P + +KAD+ WID +F LI F AC+EG+FF G+
Sbjct: 138 EAFAAIENIPSIKRKADFCFRWIDSIFDLRELRTAADRRSFLLNLICFAACIEGLFFYGA 197
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R + E + + +
Sbjct: 198 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVIDTVRREEPELFDDELARQAREM 257
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAV+ E +F D L + GM+ A M Y+E VADR LG +YG NPF +MEL
Sbjct: 258 LAEAVDCETQFAEDLLGQGVPGMSLADMRSYLEHVADRRCVQLGLEPIYGSPNPFTFMEL 317
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 318 QDVQELSNFFERRVAAYQ 335
>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
Length = 350
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 172/318 (54%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ +K+A + WT EEVDL D+ L++ E+H ++ ++
Sbjct: 21 LLDPGMD-LTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVSRLV 79
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ E+
Sbjct: 80 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERF 139
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A E +P +A+KA++ WID F LI F AC+EG+FF G+
Sbjct: 140 AAFAAVENIPSIARKAEFCFRWIDSIFELRELRTQADRRAFLLNLICFAACIEGLFFYGA 199
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R + E +VK +
Sbjct: 200 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEM 259
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
V EAV+ E +F D L + G++ A M +Y++ VADR L LG +YG NPF +MEL
Sbjct: 260 VAEAVDCEVQFAEDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMYGSANPFAFMEL 319
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 320 QDVQELSNFFERRVSAYQ 337
>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
Length = 181
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 128/179 (71%), Gaps = 2/179 (1%)
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F +LAFFA SDGIV ENL RF + V +EAR FY FQ A+ENIH+E+YS L++T I
Sbjct: 2 FFKCILAFFAPSDGIVGENLVTRFYEMVVYTEARYFYAFQAAMENIHAEVYSQLIKTLIP 61
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFW 181
N DE+ +F +F T P + +K WA W++ +F ERL+AFA VEG+ FSGSF +IFW
Sbjct: 62 NEDEQRSIFSSFMTTPGITEKTRWAKQWLERENLSFVERLVAFAVVEGLLFSGSFASIFW 121
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRNKLSEERVKGIVKEAVEIEREF 239
LKKRGLM GLTFSNELISRDEGLHCDFACLLY+ + +KL + IV+EAV E F
Sbjct: 122 LKKRGLMHGLTFSNELISRDEGLHCDFACLLYTKHIVHKLPNNVIYNIVREAVHAESIF 180
>gi|430741872|ref|YP_007201001.1| ribonucleotide reductase subunit beta [Singulisphaera acidiphila
DSM 18658]
gi|430013592|gb|AGA25306.1| ribonucleotide reductase, beta subunit [Singulisphaera acidiphila
DSM 18658]
Length = 332
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 171/319 (53%), Gaps = 22/319 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
LL P D + P++YP +EMYK A + WT EEVD S D+ + +T EKH I +
Sbjct: 2 LLDPGMD-LTLRPMRYPAFFEMYKAAIKNTWTVEEVDFSTDLADLDRRITPAEKHLIQRL 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL + + EAR + Q+ E++H Y LL+ Y+ + E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYQHINSPEARMYLSRQLYEESLHVHFYLTLLDNYLPDMAER 120
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSG 174
+ F A E +P + KAD+ WID ET A R LI F AC+EG+FF
Sbjct: 121 EQAFAAIENIPSIKGKADFCFRWIDSIEGLDRLETRAHRRQFLLNLICFAACIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKG 227
+F +++L+ +GL+ GL + RDE H FA + ++ R + E V
Sbjct: 181 AFAYVYFLRSKGLLHGLATGTNWVFRDESAHIAFAFNVIAIARREEPDLFDAALEADVVA 240
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+++EAVE E F D L +VGM+ + +Y+E+VADR L +LG +YG NP +ME
Sbjct: 241 MMREAVECETAFARDVLSFGVVGMSLQDLRKYLEYVADRRLESLGIAPIYGSRNPLAFME 300
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q NFFE+RV YQ
Sbjct: 301 LQDVQELANFFERRVSAYQ 319
>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
Length = 1292
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 42 EEVDLSQDIRQWE-SLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYG 100
E++ L D+R W+ L +E++ I+++L FF + GI+ EN+ FM EVQ+ EAR FY
Sbjct: 56 EDLFLLNDVRDWQCKLDDNERYLISNILGFFVSIAGIINENIITHFMSEVQIPEARTFYS 115
Query: 101 FQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAER 160
QIA+ENI SE YSLL++ YIK++DEKS++F A E++PCV +K +W L ++ S++ AER
Sbjct: 116 MQIAMENIQSEKYSLLIDAYIKDTDEKSKIFNAIESIPCVKRKCEWLLKSMNNSKSLAER 175
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKL 220
LIAFA VE I +S SFC I W KR LMP L+ I +E HC+F LLYS L NKL
Sbjct: 176 LIAFAAVESILYSASFCVILWFHKRSLMPKLSEYYSFIVSNEYTHCEFGRLLYSKLINKL 235
Query: 221 SEERVKGIVKEAVEIEREFV 240
E ++ I+++AV+ E++ +
Sbjct: 236 DTEMIESIIRDAVDCEKQIM 255
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVE 234
+HC F+CLL+S L NKL E ++ I+++AV+
Sbjct: 582 SIHCRFSCLLHSKLINKLDAETIESIIRDAVD 613
>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
Length = 344
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ +K A + WT EEVDL D+ L+ E+H ++ ++
Sbjct: 15 LLDPGMD-LTLRPMRYPHFFDRFKDAIKNTWTVEEVDLHSDLADLARLSPAERHLVSRLV 73
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ + E+
Sbjct: 74 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDERERF 133
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A E +P + +KA++ WID F LI F AC+EG+FF G+
Sbjct: 134 AAFAAIENIPSIRRKAEFCFRWIDSIFELRELKTREDRRAFLLNLICFAACIEGLFFYGA 193
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R++ + +V+ +
Sbjct: 194 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREM 253
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAVE E +F D L + G++ M QY++ VADR L LG +YG NPF +MEL
Sbjct: 254 LAEAVECEAQFAEDLLEQGVSGLSLDDMRQYLQHVADRRLAQLGIAPLYGSANPFAFMEL 313
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 314 QDVQELSNFFERRVSAYQ 331
>gi|389794223|ref|ZP_10197381.1| ribonucleoside-diphosphate reductase [Rhodanobacter fulvus Jip2]
gi|388432748|gb|EIL89737.1| ribonucleoside-diphosphate reductase [Rhodanobacter fulvus Jip2]
Length = 341
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 167/307 (54%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R ++ ++A ++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIRRLVAFFATGDTIVS 81
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+TYI + E++ F A ET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPAERNAAFAAIETIPS 141
Query: 140 VAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID ET A R LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IQQKGAFCFKWIDSIQGLRRLETRAHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREF 239
L+ GL + RDE H FA + +R + + +V+ +++EA+ E +F
Sbjct: 202 LLHGLAAGTNWVFRDESCHMAFAFDVVRTVREQEPDLFDADMRAQVEQMMEEAIACETQF 261
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + GM+ M QY+E+ AD+ L K YG NPFD+M+L +Q NFFE
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFAQLDMPKKYGAKNPFDFMDLQDVQELANFFE 321
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 322 RRVSAYQ 328
>gi|440796690|gb|ELR17799.1| ribonucleosidediphosphate reductase, beta subunit [Acanthamoeba
castellanii str. Neff]
Length = 171
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 118/142 (83%), Gaps = 3/142 (2%)
Query: 112 MYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI--DGSETFAERLIAFACVEG 169
MYSLL++TY+K++ EK+ LF A +T+P + KKADWAL WI +G ETF +RL+ FA VEG
Sbjct: 1 MYSLLIDTYVKDTAEKAHLFNAAQTIPSIKKKADWALKWIATEGVETFGQRLVGFAAVEG 60
Query: 170 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIV 229
IFFS S C+IFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS+L NK S++ + I+
Sbjct: 61 IFFSSS-CSIFWLKKRGLMPGLAFSNELISRDEGLHCDFACLLYSMLVNKPSDDVTRQII 119
Query: 230 KEAVEIEREFVCDALPCALVGM 251
EAVE+E+EFV ++LP AL+GM
Sbjct: 120 LEAVEMEKEFVTESLPVALIGM 141
>gi|405354037|ref|ZP_11023446.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Chondromyces apiculatus DSM 436]
gi|397092728|gb|EJJ23477.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 336
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 173/321 (53%), Gaps = 22/321 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
LL P + + P+ YP+ +EMY+ A + WT EEVD S D+ S +T E+H I +
Sbjct: 2 LLNPGLN-LTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ + E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAER 120
Query: 128 SRLFRAFETVPCVAKKADWALNWID---GSETFAER---------LIAFA-CVEGIFFSG 174
++ F A + +P + +KA + + W+D G +T + LI FA C+EG+FF
Sbjct: 121 AKAFAAVDNIPSIQRKAQFCMKWMDSIQGMDTLQTKAHRRQFLLNLICFAGCIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKG 227
+F +++L+ +GL+ GL + RDE H FA + R + E V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVA 240
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+++EAV+ E +F D L +VG++ M Y+E+VAD+ L LG V+G NP +M+
Sbjct: 241 MLREAVDCETQFAQDLLSGGVVGLSVQDMRGYLEYVADQRLQQLGMSPVFGTKNPLHFMD 300
Query: 288 LISLQGKTNFFEKRVGEYQKA 308
L +Q TNFFE+RV YQ A
Sbjct: 301 LQDVQELTNFFERRVSSYQVA 321
>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
[Streptomyces microflavus]
Length = 321
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 165/301 (54%), Gaps = 20/301 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLE 80
P++YP+ +E Y+ A + WT EEVDL D+ L+ E+H I ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 79
Query: 81 NLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCV 140
NL K + EAR + Q+ E +H + Y LL+TY+ + E++ F A E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPAERAAAFAAVENIPSI 139
Query: 141 AKKADWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 RDKAQFCFKWMDSVEKIDQLETRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E E+V ++KEAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFG 259
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D L GMN M +Y++ VAD+ L LG VYG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSENPFAFMELQGVQELTNFFER 319
Query: 301 R 301
R
Sbjct: 320 R 320
>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 361
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 166/290 (57%), Gaps = 8/290 (2%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTAD-EK 61
S +EP+L N RF + PI++ +++ YKK EA FW AEE+D S DI W +D +K
Sbjct: 36 SQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKKASDHDK 95
Query: 62 HFITHVLAFFAASDGIVLEN--LAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
I LAF +S VL + L EVQ+ EA+ FYGF+I +ENIH E+YSL ++
Sbjct: 96 SIIKKSLAFLCSS---VLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSLAIDQ 152
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCA 178
+ N+DE ++F+ + + +K +A W D S FAE+L+AF+ +E IF SF +
Sbjct: 153 LVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESSLFAEKLVAFSSIEAIFSLVSFFS 212
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIERE 238
I L+K+ ++PGL +LI +D +HCDF +YS L+ +L ++ IV EAVEIE E
Sbjct: 213 IMSLEKKDIIPGLISGIKLILKDHIVHCDFQMSIYSELKKRLDPGIIERIVTEAVEIELE 272
Query: 239 FV-CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+ D L A + IE+V DR+L G K + NP+D +E
Sbjct: 273 TLEDDYFNKQLDKETKADIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLE 322
>gi|443290856|ref|ZP_21029950.1| Ribonucleoside-diphosphate reductase [Micromonospora lupini str.
Lupac 08]
gi|385886411|emb|CCH18024.1| Ribonucleoside-diphosphate reductase [Micromonospora lupini str.
Lupac 08]
Length = 345
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
LL P D + P++YP ++ ++ A + WT EEVDL D+ + L+ E+H ++ ++
Sbjct: 16 LLDPGMD-LTLRPMRYPHFFDRFRAAIRNTWTVEEVDLHADLADLDKLSPAERHLVSRLV 74
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFA D IV NL + V E R + Q+ E +H + Y LL+TY+ + E+
Sbjct: 75 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDETERF 134
Query: 129 RLFRAFETVPCVAKKADWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A E +P + +KA++ WID F LI F AC+EG+FF G+
Sbjct: 135 AAFAAIENIPSIRRKAEFCFRWIDSLGELRELRTSDDRRAFLLNLICFAACIEGLFFYGA 194
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGI 228
F +++L+ RGL+ GL + RDE +H FA + +R + + ++V+ +
Sbjct: 195 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDDDLADQVRQM 254
Query: 229 VKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMEL 288
+ EAVE E +F D + + G+ A M +Y++ VADR L LG YG NPF +MEL
Sbjct: 255 LTEAVECEVQFAEDLVGQGVPGLTLADMREYLQHVADRRLVQLGIAPHYGSANPFAFMEL 314
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 315 QDVQELSNFFERRVSAYQ 332
>gi|355717374|gb|AES05912.1| ribonucleotide reductase M2 B [Mustela putorius furo]
Length = 142
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 113/146 (77%), Gaps = 4/146 (2%)
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ AVEIE+EF+ +
Sbjct: 1 KKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTE 60
Query: 243 ALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 61 ALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRV 120
Query: 303 GEYQKASVMSSLNGNGGNHVFKMDED 328
EYQ+ +VM+ N VF +D D
Sbjct: 121 AEYQRFAVMAETTDN----VFTLDAD 142
>gi|338536259|ref|YP_004669593.1| ribonucleoside-diphosphate reductase [Myxococcus fulvus HW-1]
gi|337262355|gb|AEI68515.1| Ribonucleoside-diphosphate reductase [Myxococcus fulvus HW-1]
Length = 336
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 173/321 (53%), Gaps = 22/321 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
LL P + + P+ YP+ +EMY+ A + WT EEVD S D+ S +T E+H I +
Sbjct: 2 LLNPGLN-LTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ + E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPGER 120
Query: 128 SRLFRAFETVPCVAKKADWALNWID---GSET---------FAERLIAFA-CVEGIFFSG 174
++ F A + +P + +KA + + W+D G +T F LI FA C+EG+FF
Sbjct: 121 AKAFAAIDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLLNLICFAGCIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKG 227
+F +++L+ +GL+ GL + RDE H FA + R + E V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVA 240
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+++EAV+ E +F D L ++G++ M Y+E+VAD+ L LG V+G NP +M+
Sbjct: 241 MLREAVDCETQFAQDLLSGGVMGLSVQDMRGYLEYVADQRLQMLGMSPVFGTKNPLHFMD 300
Query: 288 LISLQGKTNFFEKRVGEYQKA 308
L +Q TNFFE+RV YQ A
Sbjct: 301 LQDVQELTNFFERRVSSYQVA 321
>gi|444917549|ref|ZP_21237644.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Cystobacter fuscus DSM 2262]
gi|444710890|gb|ELW51851.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Cystobacter fuscus DSM 2262]
Length = 353
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 172/323 (53%), Gaps = 22/323 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
LL P + + P+QYP +EMY+ A + WT EEVD S D+ S ++A ++H I +
Sbjct: 23 LLDPGLN-LTLRPMQYPAFFEMYRNAIKNTWTVEEVDFSTDVGDLRSKMSAADRHLIQRL 81
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K V EAR + Q+ E +H + Y LL+TY+ + E+
Sbjct: 82 VAFFATGDSIVSNNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAER 141
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAF-ACVEGIFFSG 174
++ F A + +P + +KA + W+D ET +R LI F AC+EG+FF
Sbjct: 142 AKAFAAIDNIPSIQEKAAFCFKWMDSVHQLDRLETREQRRAFLLNLICFAACIEGLFFFA 201
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKG 227
+F +++L+ RGL+ GL + RDE H FA + +R + E V
Sbjct: 202 AFAYVYFLRSRGLLHGLAGGTNWVFRDESAHMAFAFEVVKCVRREEPGLFDAQMERDVVT 261
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+++EAV E F D L + G++ M QY+E+VAD+ LG L K YG NPF +M+
Sbjct: 262 MMEEAVACELRFAEDLLGGGVAGLSVNEMRQYLEYVADQRLGMLELPKRYGAKNPFGFMD 321
Query: 288 LISLQGKTNFFEKRVGEYQKASV 310
L +Q NFFE+RV YQ V
Sbjct: 322 LQDVQELANFFERRVSAYQVGVV 344
>gi|344205623|ref|YP_004790764.1| ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
JV3]
gi|343776985|gb|AEM49538.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
JV3]
Length = 339
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 175/327 (53%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M P++ LL P + + P++YP+ ++MY+ A + WT EE++ DI S ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG------SETFAERL------IAF-AC 166
Y+ + +E+++ F A E + + KKAD+ WID ET A+R I F AC
Sbjct: 120 YLPDPEERAKAFSAVENIDSIKKKADFCFKWIDSIQDLTRIETRAQRRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDD 239
Query: 223 ---ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
xanthus DK 1622]
gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
xanthus DK 1622]
Length = 349
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 173/324 (53%), Gaps = 22/324 (6%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
E LL P + + P+ YP+ +EMY+ A + WT EEVD S D+ S +T E+H I
Sbjct: 12 EAMLLNPGLN-LTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLI 70
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
++AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ +
Sbjct: 71 HRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDP 130
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGS------ETFAER------LIAFA-CVEGIF 171
E++ F A + +P + +KA + + W+D +T A R LI FA C+EG+F
Sbjct: 131 AERAMAFAAVDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLLNLICFAGCIEGLF 190
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEER 224
F +F +++L+ +GL+ GL + RDE H FA + R + E
Sbjct: 191 FFAAFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERD 250
Query: 225 VKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFD 284
V +++EAVE E +F D L ++G++ M Y+E+VAD+ L LG V+G NP
Sbjct: 251 VVAMLREAVECETQFAQDLLSGGVMGLSVQDMRGYLEYVADQRLQMLGMTPVFGTKNPLH 310
Query: 285 WMELISLQGKTNFFEKRVGEYQKA 308
+M+L +Q TNFFE+RV YQ A
Sbjct: 311 FMDLQDVQELTNFFERRVSSYQVA 334
>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
Length = 339
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 174/327 (53%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M P++ LL P + + P++YP+ ++MY+ A + WT EE++ DI S ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG------SETFAERL------IAF-AC 166
Y+ + +E+ + F A E + + KKAD+ WID ET AER I F AC
Sbjct: 120 YLPDPEERVKAFAAVENIDSIKKKADFCFKWIDSIQDLKRIETRAERRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDD 239
Query: 223 ---ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|190572323|ref|YP_001970168.1| ribonucleotide diphosphate reductase small subunit
[Stenotrophomonas maltophilia K279a]
gi|408825288|ref|ZP_11210178.1| ribonucleoside-diphosphate reductase [Pseudomonas geniculata N1]
gi|424666640|ref|ZP_18103666.1| hypothetical protein A1OC_00193 [Stenotrophomonas maltophilia
Ab55555]
gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
[Stenotrophomonas maltophilia K279a]
gi|401070086|gb|EJP78604.1| hypothetical protein A1OC_00193 [Stenotrophomonas maltophilia
Ab55555]
gi|456737526|gb|EMF62221.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Stenotrophomonas maltophilia EPM1]
Length = 339
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 174/327 (53%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M P++ LL P + + P++YP+ ++MY+ A + WT EE++ DI S ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET------------FAERLIAF-AC 166
Y+ + +E+++ F A E + + KKAD+ WID ++ F I F AC
Sbjct: 120 YLPDPEERAKAFSAVENIDSIKKKADFCFKWIDSIQSLTRIETREQRRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NK 219
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R ++
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDE 239
Query: 220 LSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
+++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|389799150|ref|ZP_10202153.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 116-2]
gi|388443609|gb|EIL99751.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 116-2]
Length = 341
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R ++ ++A ++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIQRLVAFFATGDTIVS 81
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+TYI + E++ F A ET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPAERNGAFAAIETIPS 141
Query: 140 VAKKADWALNWIDGSE------------TFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID + F LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQDLRQLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREF 239
L+ GL + RDE H FA + +R + E +V+ ++ +A+ E +F
Sbjct: 202 LLHGLAAGTNWVFRDESGHMAFAFEVVRTVRAQEPELFDDAMRAQVEEMMGDAIACETQF 261
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + GM+ M QY+E+ AD+ L K YG NPFD+M+L +Q NFFE
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFVQLDLPKKYGAKNPFDFMDLQDVQELANFFE 321
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 322 RRVSAYQ 328
>gi|386716674|ref|YP_006183000.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
[Stenotrophomonas maltophilia D457]
gi|384076236|emb|CCH10817.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Stenotrophomonas maltophilia D457]
Length = 339
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 174/327 (53%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M P++ LL P + + P++YP+ ++MY+ A + WT EE++ DI S ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG------SETFAERL------IAF-AC 166
Y+ + +E+++ F A E + + KKAD+ WID ET +R I F AC
Sbjct: 120 YLPDPEERAKAFSAVENIDSIKKKADFCFKWIDSIQDLTRIETREQRRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDD 239
Query: 223 ---ERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 TNPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|389774176|ref|ZP_10192323.1| ribonucleoside-diphosphate reductase [Rhodanobacter spathiphylli
B39]
gi|388438591|gb|EIL95336.1| ribonucleoside-diphosphate reductase [Rhodanobacter spathiphylli
B39]
Length = 341
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 164/307 (53%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R ++ ++ ++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIRNTWTVEEVDFSMDTRDLDTKMSPADRHLIQRLVAFFATGDTIVS 81
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+TYI + E++ F A ET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPTERNAAFAAIETIPS 141
Query: 140 VAKKADWALNWIDGSE------------TFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID + F LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQGLQRLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREF 239
L+ GL + RDE H FA + +R + E +++ ++++A+ E +F
Sbjct: 202 LLHGLAAGTNWVFRDESCHMAFAFDVVRTVRAQEPELFDDAMRAQIEEMMEDAIACETQF 261
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + GM+ M QY+E+ AD+ L K YG NPFD+M+L +Q NFFE
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFVQLDLPKKYGAKNPFDFMDLQDVQELANFFE 321
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 322 RRVSAYQ 328
>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
20547]
gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
20547]
Length = 365
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 167/310 (53%), Gaps = 27/310 (8%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP+ +EM++ A + WT EE+DL D+ + L+ E+H ++ ++AFFA D IV
Sbjct: 46 PMRYPQFYEMFRDAIKNTWTVEEIDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVA 105
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+TY+ + E+ F A E +P
Sbjct: 106 NNLVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPS 165
Query: 140 VAKKADWALNWIDGSETFAE------------RLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KA++ WID E + LI F C+EG+FF G+F +++L+ RG
Sbjct: 166 IRTKAEFCFTWIDSIENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRG 225
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEE----------RVKGIVKEAVEIE 236
L+ GL + RDE +H FA + +R SEE +V+ ++ EAV+ E
Sbjct: 226 LLNGLASGTNWVFRDESMHMAFAFEVVETVR---SEEPDLFDAEMAGQVRQMLMEAVDAE 282
Query: 237 REFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTN 296
+F D L + G++ A M Y+E VADR LG ++YG NP +MEL +Q +N
Sbjct: 283 AQFAEDLLGMGVAGLSVADMRAYLENVADRRAVQLGMPEIYGTKNPLAFMELQDVQELSN 342
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 343 FFERRVSAYQ 352
>gi|426334717|ref|XP_004028887.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Gorilla
gorilla gorilla]
Length = 315
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 109/126 (86%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEK 127
K+ E+
Sbjct: 185 KDPKER 190
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Query: 203 GLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
GLHCDFACL++ L +K SEERV+ I+ AV IE+EF+ +ALP L+GMN LM QYIEF
Sbjct: 193 GLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEF 252
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHV 322
VADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N
Sbjct: 253 VADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS---- 308
Query: 323 FKMDEDF 329
F +D DF
Sbjct: 309 FTLDADF 315
>gi|442322490|ref|YP_007362511.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
stipitatus DSM 14675]
gi|441490132|gb|AGC46827.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
stipitatus DSM 14675]
Length = 336
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 176/328 (53%), Gaps = 22/328 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
LL P + + P+ YP +EMY+ A + WT EEVD S D+ S +T E+H I +
Sbjct: 2 LLEPGLN-LTLRPMAYPAFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ + E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHINAPEARMYLSRQLFEEALHVQFYLTLLDTYVPDPAER 120
Query: 128 SRLFRAFETVPCVAKKADWALNW------IDGSETFAER------LIAFA-CVEGIFFSG 174
++ F A + +P + +KA + + W +D +T ER LI FA C+EG+FF
Sbjct: 121 AKAFAAIDNIPSIQRKARFCMKWMDSIHDVDALKTKDERRRFLLNLICFAGCIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA--CLLYSL-----LRNKLSEERVKG 227
+F +++L+ +GL+ GL + RDE H FA C+ + L + E V+
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMGFAFECIQVARKEEPDLFDAKMERDVEA 240
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
+++EAVE E +F D L + G++ M Y+E+VAD+ L LG V+ NP +M+
Sbjct: 241 MMREAVECETQFAQDLLSGGVAGLSVQEMRGYLEYVADQRLQMLGIPAVFKTKNPLSFMD 300
Query: 288 LISLQGKTNFFEKRVGEYQKASVMSSLN 315
L +Q TNFFE+RV YQ A + + N
Sbjct: 301 LQDVQELTNFFERRVSAYQVAVGVGAAN 328
>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
Length = 356
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 169/330 (51%), Gaps = 31/330 (9%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAASDGIVL 79
P+ YP+ + Y++A + WT EEVD S D+R E + E+H I ++AFFA D IV
Sbjct: 37 PMAYPDFYAQYRQAIRNTWTVEEVDFSTDLRDLAERMGPAERHLIQRLVAFFATGDSIVA 96
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+TY+ + D++ F A ET+P
Sbjct: 97 NNLVLSLYRHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPDQRHAAFAAVETIPS 156
Query: 140 VAKKADWALNW---------IDGS---ETFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +KA++ L W +DG F LI F AC EG+FF G+F +++L+ RG
Sbjct: 157 IRRKAEFCLRWQDTVAAIPRLDGPAHRRQFLLNLICFAACTEGLFFYGAFAYVYFLRSRG 216
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREF 239
L+ GL + RDE H FA + ++R++ E V +++EAV E F
Sbjct: 217 LLHGLAAGTNWVFRDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAF 276
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G+ A + Y+E+ AD+ L LG YG TNP +MEL + NFFE
Sbjct: 277 AEDLLGLGVAGLTVADLRAYLEYCADQRLQRLGMATRYGSTNPLSFMELQDIPELANFFE 336
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+RV YQ +G + +D DF
Sbjct: 337 RRVSAYQ----------HGVSGTIDLDADF 356
>gi|148700272|gb|EDL32219.1| mCG1034315 [Mus musculus]
Length = 213
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 110/140 (78%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW MYK+A ASFWT EEVDLS+++ W L +DEK+FI+
Sbjct: 74 EEPLLRKSSRRFVIFPIQYPDIWRMYKQARASFWTGEEVDLSKNLPHWNKLKSDEKYFIS 133
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV E FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 134 HILAFFAASDGIVNENLVERFSQEVQVPETHCFYGFQILIENVHSEMYSLLIDTYIRDPK 193
Query: 126 EKSRLFRAFETVPCVAKKAD 145
++ LF A ET+P V KKAD
Sbjct: 194 KREFLFNAIETMPYVKKKAD 213
>gi|352086179|ref|ZP_08953758.1| Ribonucleoside-diphosphate reductase [Rhodanobacter sp. 2APBS1]
gi|351679813|gb|EHA62947.1| Ribonucleoside-diphosphate reductase [Rhodanobacter sp. 2APBS1]
Length = 341
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 163/307 (53%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R ++ ++A ++H I ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIQRLVAFFATGDTIVS 81
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+ YI + E++ F A ET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDAYIPDPAERNGAFAAIETIPS 141
Query: 140 VAKKADWALNWIDGSETFAE------------RLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID + + LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQDLPQLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEIEREF 239
L+ GL + RDE H FA + +R + E +V+ ++++A+ E F
Sbjct: 202 LLHGLAAGTNWVFRDESGHMAFAFEVVRTVRAQEPELFDDAMRAQVEEMMEDAIACETRF 261
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + GM+ M QY+E+ AD+ L K YG NPFD+M+L +Q NFFE
Sbjct: 262 AEDVLSGGVAGMSVKDMRQYLEYCADQRFVQLDLPKKYGAKNPFDFMDLQDVQELANFFE 321
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 322 RRVSAYQ 328
>gi|410927806|ref|XP_003977331.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like,
partial [Takifugu rubripes]
Length = 179
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 110/131 (83%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+D++ WESL +E++FI+H
Sbjct: 47 EPLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKDEERYFISH 106
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E
Sbjct: 107 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPSE 166
Query: 127 KSRLFRAFETV 137
+ +F F +
Sbjct: 167 RWGIFAGFAST 177
>gi|194363985|ref|YP_002026595.1| ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
Length = 339
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 24/328 (7%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTAD 59
M P++ LL P + + P++YP+ ++MY+ A + WT EE++ DI S ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDISDLHSKMSPG 59
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+H I ++AFFA D IV NL + + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDG------SETFAERL------IAF-AC 166
Y+ + DE+ + F A E + + KKAD+ WID ET ER I F AC
Sbjct: 120 YLPDPDERVKAFAAVENIDSIKKKADFCFKWIDSIQNLKRIETREERRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR--------N 218
+EG+FF +F +++ + RGL+ GL + RDE H DFA ++R +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLNGLASGTNWVFRDESAHMDFAFECVDVIREEEPDLFDD 239
Query: 219 KLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYG 278
K+ ++ V ++ EA+E E +F D L + G++ M QY++ AD LG + Y
Sbjct: 240 KMKQD-VYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADNHFHRLGMERKYN 298
Query: 279 VTNPFDWMELISLQGKTNFFEKRVGEYQ 306
V NP +MEL +Q TNFFE+R YQ
Sbjct: 299 VRNPLSFMELQDVQELTNFFERRASAYQ 326
>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
Length = 139
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAI 179
IK+ E+ LF A ET+PCV KKADWALNWI + F ER++AFA VEGIFFSGSF +I
Sbjct: 1 IKDPKEREFLFNAVETLPCVKKKADWALNWIGNKDAQFGERVVAFAAVEGIFFSGSFASI 60
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE VK I+ AV+IE+EF
Sbjct: 61 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEATVKSIIVNAVQIEQEF 120
Query: 240 VCDALPCALVGMNGALMSQ 258
+ ALP L+GMN LM Q
Sbjct: 121 LTQALPVKLIGMNCDLMKQ 139
>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
aurantiaca DW4/3-1]
gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 336
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 169/316 (53%), Gaps = 21/316 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P+ YP +EMY+ A + WT EEVD S D+ S +T E+H I ++AFFA D IV
Sbjct: 13 PMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL K + EAR + Q+ E +H + Y LL+TY+ + ++++ F A + +P
Sbjct: 73 NNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPADRAKAFAAIDNIPS 132
Query: 140 VAKKADWALNWIDGSETFAE------------RLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ +KA + L W+D A+ LI FA C+EG+FF +F +++L+ +G
Sbjct: 133 IQRKARFCLKWMDSIHDLAQLKTREDRRRFLLNLICFAGCIEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNK---LSEERVK----GIVKEAVEIEREF 239
L+ GL + RDE H FA + R + L + R++ +++EAVE E F
Sbjct: 193 LLHGLAAGTNWVFRDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLF 252
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ M QY+E+VAD+ L LG V+ V N +M+L +Q TNFFE
Sbjct: 253 AQDLLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFRVKNSLPFMDLQDVQELTNFFE 312
Query: 300 KRVGEYQKASVMSSLN 315
+RV YQ A + + N
Sbjct: 313 RRVSAYQVAVGVGAAN 328
>gi|320107274|ref|YP_004182864.1| ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
Length = 346
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 165/309 (53%), Gaps = 21/309 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAASDGIVL 79
P++YP+ ++M++ + WT EEVD D+ + LT E H I ++AFFA D IV
Sbjct: 27 PMRYPQFYDMFRDGIKNTWTVEEVDFQTDLVDLKQRLTPAEIHTIQRLVAFFATGDSIVS 86
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL K + EAR + Q+ E +H + Y LL+ YI +E++ F A E +P
Sbjct: 87 NNLVLNLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDNYIPEPEERNAAFAAVENIPS 146
Query: 140 VAKKADWALNWIDGSE------------TFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
++KKAD+ + W+D + F LI F AC+EG+FF +F +++ + +G
Sbjct: 147 ISKKADFCMKWMDSIQQLDQLETKEHRRQFLLNLICFAACIEGLFFFAAFAYVYFFRSKG 206
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREF 239
L+ GL + RDE H +FA + ++R + E +V +++EA++ E +F
Sbjct: 207 LLHGLASGTNWVFRDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQF 266
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ M QY+ +VAD L LG G + NPF +MEL +Q TNFFE
Sbjct: 267 AEDLLSGGVAGLSVRDMRQYLGYVADSRLERLGIGAHFNAKNPFSFMELQDVQELTNFFE 326
Query: 300 KRVGEYQKA 308
+RV YQ A
Sbjct: 327 RRVSAYQTA 335
>gi|323304329|gb|EGA58102.1| Rnr2p [Saccharomyces cerevisiae FostersB]
Length = 229
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 115/153 (75%), Gaps = 1/153 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWIDGSETF 157
E LF A T+P + +KA+WAL WI ++ F
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADAF 227
>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
obscuriglobus UQM 2246]
Length = 332
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 164/307 (53%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP +EMYK A + WT +EVD S D+ +T E+H I ++AFFA D IV
Sbjct: 13 PMRYPPFFEMYKDAIKNTWTVDEVDFSTDLADLRGRVTPAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL K V EAR + Q+ E +H + Y LL+ Y+ + + F A + +P
Sbjct: 73 NNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDMAAREAAFAAVDNIPS 132
Query: 140 VAKKADWALNWIDGSE------TFAER------LIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KAD+ WID E T A R L+ FA C+EG+FF +F +++L+ +G
Sbjct: 133 IKLKADFCFKWIDSIEGLDRLETRAHRRAFLLNLVCFAACIEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREF 239
L+ GL + RDE H FA + +R + E ++ +++EAVE E F
Sbjct: 193 LLHGLATGTNWVFRDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAF 252
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ A + Y+E+VADR L +LG V+G NPF +M+L +Q TNFFE
Sbjct: 253 ARDVLGQGVAGLSLADLRSYLEYVADRRLESLGIAPVFGAKNPFGFMDLQDVQELTNFFE 312
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 313 RRVSAYQ 319
>gi|66802406|ref|XP_629985.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
gi|60463390|gb|EAL61578.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
Length = 257
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 126/175 (72%), Gaps = 4/175 (2%)
Query: 26 EIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVLENLAA 84
+IW+MYKK A+ W EE++ S D WE LT DE+ F ++VLAFF AS GI+ +NL
Sbjct: 86 DIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNLN- 144
Query: 85 RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKA 144
RFM +VQ+ EA+ FY +QI I+ +HSE YSLL+ET IK+ + K +LF A ET+PCV KKA
Sbjct: 145 RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKA 204
Query: 145 DWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 199
+WAL WI+ E+F +RL+A E IFFSGSF I LKKR LM GLTFSNELI+
Sbjct: 205 EWALKWIN--ESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
>gi|383454419|ref|YP_005368408.1| ribonucleoside-diphosphate reductase subunit beta [Corallococcus
coralloides DSM 2259]
gi|380733637|gb|AFE09639.1| ribonucleoside-diphosphate reductase subunit beta [Corallococcus
coralloides DSM 2259]
Length = 336
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 168/319 (52%), Gaps = 22/319 (6%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHV 67
LL P + + P+ YP +EMY+ A + WT EEVD S D+ S +T E+H I +
Sbjct: 2 LLDPGMN-LTLRPMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 68 LAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEK 127
+AFFA D IV NL K + EAR + Q+ E +H + Y LL+TY+ + E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAER 120
Query: 128 SRLFRAFETVPCVAKKADWALNWIDGSET------------FAERLIAFA-CVEGIFFSG 174
++ F A + +P + +KA + + W+D + F LI FA C+EG+FF
Sbjct: 121 AKAFAAVDNIPSIQRKARFCMKWMDSIQALDQVRSKSDRRQFLLNLICFAGCIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKG 227
+F +++L+ +GL+ GL + RDE H FA R + E+ V
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFEAIKTARKEEPDLFDAGLEKDVVQ 240
Query: 228 IVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWME 287
++++AVE E +F D L ++G++ M Y+E+VAD+ L LG ++ NP +M+
Sbjct: 241 MMRDAVECETQFAQDLLSGGVMGLSVQEMRGYLEYVADQRLQMLGMAPIFHTKNPLHFMD 300
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q TNFFE+RV YQ
Sbjct: 301 LQDVQELTNFFERRVSSYQ 319
>gi|388498368|gb|AFK37250.1| unknown [Lotus japonicus]
Length = 119
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/109 (84%), Positives = 97/109 (88%), Gaps = 3/109 (2%)
Query: 221 SEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVT 280
+E+ V+ + + E EFVCDALPCALVGMNG LMSQYIEFVADRLLGALGCGKVYGV
Sbjct: 14 AEDSVRAVWTDG---EAEFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYGVQ 70
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGG HVFKMDEDF
Sbjct: 71 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHVFKMDEDF 119
>gi|269865675|ref|XP_002652006.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063328|gb|EED42049.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 183
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 113/157 (71%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIA 163
++ LF A E +P + KKA WA WI +F R +A
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVA 182
>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase subunit beta [Acidobacterium
capsulatum ATCC 51196]
gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 340
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 166/309 (53%), Gaps = 21/309 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAASDGIVL 79
P++YP ++M++ + WT EEVD D+ + L+ E H I ++AFFA D IV
Sbjct: 21 PMRYPVFYDMFRDGIKNTWTVEEVDFQTDLVDLKQRLSPAEVHLIQRLVAFFATGDSIVS 80
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL K + EAR + Q+ E +H + Y LL+ Y+ + + ++ F A E +P
Sbjct: 81 NNLVLNLYKHINSPEARLYLSRQLYEEAVHVQFYLTLLDNYVPDPEARAAAFAAVENIPS 140
Query: 140 VAKKADWALNWIDGSETFAE------------RLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
++KKAD+ + W+D + E LI F AC+EG+FF +F +++L+ +G
Sbjct: 141 ISKKADFCMKWMDSIQQLDELKTREHRRQFLLNLICFAACIEGLFFFAAFAYVYFLRSKG 200
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREF 239
L+ GL + RDE H +FA + +++R++ E + ++ EAV+ E +F
Sbjct: 201 LLHGLASGTNWVFRDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQF 260
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ M QY+ +VAD L LG +GV NPF +MEL +Q TNFFE
Sbjct: 261 AEDLLSGGVAGLSVRDMRQYLGYVADSRLQRLGIAPAFGVKNPFSFMELQDVQELTNFFE 320
Query: 300 KRVGEYQKA 308
+RV YQ A
Sbjct: 321 RRVSAYQTA 329
>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 224
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 105 IENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIA 163
+ENI+SE+YS++++ + K+ + LF+ +P V K + WI ++ +AERL+A
Sbjct: 2 MENIYSEVYSMMVDAFFKDP-KNIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVA 60
Query: 164 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEE 223
FA EGIF +G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR K + +
Sbjct: 61 FAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPK 120
Query: 224 RVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPF 283
++ I+ EAVEIE+E+ ++LP GM+ + YIEFVAD LL G K Y NPF
Sbjct: 121 IIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPF 180
Query: 284 DWMELISLQGKTNFFEKRVGEYQKASVMS 312
++ME ++ GKT FFEK+V +YQKAS MS
Sbjct: 181 EFMEDVATAGKTTFFEKKVSDYQKASDMS 209
>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
Length = 319
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 163/307 (53%), Gaps = 16/307 (5%)
Query: 31 YKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEV 90
Y+K + S W EEVD S+D + W+ L+ +EK F +LAFFA DG+V+ENL F +EV
Sbjct: 21 YQKLKKSHWIPEEVDTSKDAQDWQLLSKEEKSFAKLILAFFAQFDGLVVENLVRHFQQEV 80
Query: 91 Q--VSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWAL 148
E FY Q A E IH+E Y L+ + S ++++ A + K ADW
Sbjct: 81 SSFAKEIEWFYILQAANELIHNETYMNLINVLLPPS-KRAKALDAISNYASIRKIADWVE 139
Query: 149 NWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W++ + ER+IAFA +EG+ F+G+F A+++ + GL +NE ISRDE LH F
Sbjct: 140 KWMNPAVPLPERIIAFAALEGVIFTGAFAAVYYFTISNRLKGLRTANEWISRDEALHKKF 199
Query: 209 ACLLYSLLRNKL------SEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEF 262
A +LY+ L ++L S+ER I+ A+E +F+ +L V ++ M Y++
Sbjct: 200 AEVLYNFLVDELKVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNIDADRMLGYMKR 259
Query: 263 VADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHV 322
D L L KVY N D+M LI L+ K NFFE + +Y K M G+G
Sbjct: 260 AVDDLATGLKYEKVYNAENTLDYMLLIGLENKGNFFEGVITDYSKGMDM----GDGS--- 312
Query: 323 FKMDEDF 329
F DF
Sbjct: 313 FNTKADF 319
>gi|357415820|ref|YP_004928840.1| ribonucleoside-diphosphate reductase [Pseudoxanthomonas spadix
BD-a59]
gi|355333398|gb|AER54799.1| Ribonucleoside-diphosphate reductase [Pseudoxanthomonas spadix
BD-a59]
Length = 332
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 21/307 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAASDGIVL 79
P++YP+ ++MY+ A + WT EE++ DI + +T ++H I ++AFFA D IV
Sbjct: 13 PMRYPQFYDMYRDAIRNSWTVEEINFQIDIADLHDKMTPADRHLIHRLVAFFATGDSIVS 72
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL + + EAR + Q+ E +H + Y LL+ Y+ E+S+ F A + +
Sbjct: 73 NNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPEPGERSKAFAAVDNIAS 132
Query: 140 VAKKADWALNWIDGS------ETFAERL------IAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KA + W+D ET A R I FA C+EG+FF +F +++ + RG
Sbjct: 133 IRNKAGFCFKWMDSLQDLGRLETRAHRRQFLLNQICFATCIEGLFFFAAFAYVYYFRSRG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKGIVKEAVEIEREF 239
L+PGL + RDE H FA ++R ++ +++V+ +++EA+E E +F
Sbjct: 193 LLPGLASGTNWVFRDESCHMAFAFESVRVVREEEPDLFDEQMQQQVQAMLEEAIECELQF 252
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ M QY++ AD LG + Y V NP +MEL +Q TNFFE
Sbjct: 253 AEDVLSGGVAGISSRDMRQYLQHCADNHFARLGMERKYNVRNPLPFMELQDVQELTNFFE 312
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 313 RRVSSYQ 319
>gi|393225089|gb|EJD33222.1| ferritin-like protein [Auricularia delicata TFB-10046 SS5]
Length = 381
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 162/307 (52%), Gaps = 12/307 (3%)
Query: 17 FCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFITHVLAFFAASD 75
C PI Y ++W +YKKA AS+W + VD D+ + SL EK I +++A A++
Sbjct: 51 LCPNPIPYSQLWSIYKKAAASYWVVDYVDPRPDVYDYRRSLNIIEKDIIVYLIALLASTK 110
Query: 76 GIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFE 135
G+ ++A F ++ E + F+G Q+A+EN H + S L ++K+SDE+ ++F
Sbjct: 111 GVHSTSIARYFTGGPELMETKYFFGIQMAMENTHLDCCSRFLWAFVKDSDEREQVFDVLS 170
Query: 136 TVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
+P V + W WID +++ + RL+AFAC + + + G+F + W++ R L+P L
Sbjct: 171 ELPYVQNRTAWTKRWIDDTQSPYHVRLVAFACSQVLPYCGTFAILLWMEDRELLPSLARC 230
Query: 195 NELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGA 254
N L++ D G + L LL+ + + + + +A EIE+ F+ +LP + +G+
Sbjct: 231 NRLMAGDAGTLIRYVRELLPLLKKQPCQHIAEDAIVDAAEIEKRFLTLSLPISYIGLEEK 290
Query: 255 LMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFF----------EKRVGE 304
++ YIE ADRLL LG K Y NPF + + LQ +FF RVG
Sbjct: 291 DIALYIEHTADRLLECLGYQKKYKSPNPFPFAQFEPLQSNCDFFALQSPSQLGDTDRVGP 350
Query: 305 YQKASVM 311
SV+
Sbjct: 351 PPTKSVL 357
>gi|269867180|ref|XP_002652512.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062330|gb|EED41544.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 196
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 108/145 (74%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL R+ +FPIQYPEIWE YK E++FWT EEVD++ D + +LT +E+ FI +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I++ +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KSRLFRAFETVPCVAKKADWALNWI 151
++ LF A E +P + KKA WA WI
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWI 170
>gi|432884081|ref|XP_004074433.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Oryzias latipes]
Length = 279
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 102/125 (81%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EPLL NP RF +FPIQYP+IW+MYK+A+ASFWT EEVDLS+D+ W+ L DEKHFI+
Sbjct: 34 DEPLLRENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDRLKPDEKHFIS 93
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+VLAFFAASDGIV ENL RF EVQV EAR+FY FQI IE +HSEMYSLL+ TYI++
Sbjct: 94 NVLAFFAASDGIVNENLVQRFSLEVQVPEARSFYSFQILIETVHSEMYSLLINTYIRDLK 153
Query: 126 EKSRL 130
E+S L
Sbjct: 154 ERSGL 158
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 101/139 (72%), Gaps = 7/139 (5%)
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
T+ +L R GLHC+FACLLYS L K SE+RV+GI+ +AV IE+EF+ +ALP L+GM
Sbjct: 147 TYIRDLKERS-GLHCNFACLLYSYLVKKPSEDRVRGIITKAVCIEQEFLTEALPVDLIGM 205
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM QYIEFVADRLL L KVY V NPFD+ME ISL+GKTNFFEKRV EYQ+ VM
Sbjct: 206 NCCLMKQYIEFVADRLLADLDLDKVYKVENPFDFMESISLEGKTNFFEKRVAEYQRFGVM 265
Query: 312 SS-LNGNGGNHVFKMDEDF 329
S+ L+G F +D DF
Sbjct: 266 SNMLDGE-----FTLDADF 279
>gi|393224234|gb|EJD32719.1| ribonucleotide reductase [Auricularia delicata TFB-10046 SS5]
Length = 270
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 2/264 (0%)
Query: 39 WTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARA 97
W V+ D R W E+L+ E+ + ++L AAS + ENLA+ F V++ EAR
Sbjct: 3 WATSGVEPVGDCRDWDENLSDGERDLLAYLLVSVAASKAVDFENLASHFASCVRMEEARC 62
Query: 98 FYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSET- 156
FYG Q+A H E +S +IK + ++ F A VP V +KA W + W+D +
Sbjct: 63 FYGLQLASAGAHMETFSRFARAFIKGAASRAFYFNAIANVPFVRRKAQWVMRWVDAQDPP 122
Query: 157 FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 216
F RL+AF + IF+SG+F + W +RG++P L ++EL++RDE + DFAC L LL
Sbjct: 123 FRVRLVAFLAAKAIFYSGTFFCLSWFDERGILPALCHASELVARDESVGIDFACRLLRLL 182
Query: 217 RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKV 276
+ V+ IV +AV IE+EF+ + + + + M Y+E+VADRLL A+G
Sbjct: 183 GVRPCHHVVRRIVLDAVNIEKEFLKELVGASGFAFDADRMGLYVEYVADRLLEAMGYQAE 242
Query: 277 YGVTNPFDWMELISLQGKTNFFEK 300
+ NP+ + L L+G FFE+
Sbjct: 243 FSTPNPWTFGSLRPLRGSAGFFER 266
>gi|390957923|ref|YP_006421680.1| ribonucleotide reductase subunit beta [Terriglobus roseus DSM
18391]
gi|390958265|ref|YP_006422022.1| ribonucleotide reductase subunit beta [Terriglobus roseus DSM
18391]
gi|390412841|gb|AFL88345.1| ribonucleotide reductase, beta subunit [Terriglobus roseus DSM
18391]
gi|390413183|gb|AFL88687.1| ribonucleotide reductase, beta subunit [Terriglobus roseus DSM
18391]
Length = 350
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 160/309 (51%), Gaps = 21/309 (6%)
Query: 21 PIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFITHVLAFFAASDGIVL 79
P++YP ++M++ + WT EEVD S D+ S ++ E H I ++AFFA D IV
Sbjct: 31 PMKYPVYYDMFRDGIKNTWTVEEVDFSTDLVDLRSKMSPAEIHTIKRLVAFFATGDSIVS 90
Query: 80 ENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPC 139
NL K + EAR + Q+ E +H + Y LL+ Y+ + E+ F A E +P
Sbjct: 91 NNLVLNLYKHINSPEARLYLSRQLYEEAVHVQFYLTLLDNYVPDQKEREEAFSAVENIPS 150
Query: 140 VAKKADWALNWIDGSET------------FAERLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KKA++ + W+D + F LI FA +EG+FF +F +++ + +G
Sbjct: 151 IQKKAEFCMKWMDSIQALDTLETRDHRRQFLLNLICFASSIEGLFFFAAFAYVYFFRSKG 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLS-------EERVKGIVKEAVEIEREF 239
L+ GL + RDE H +FA + + +R + E ++ +++EAV+ E +F
Sbjct: 211 LLHGLASGTNWVFRDESCHLEFAFEVVNTVRQQEPDLWDADLERQIIEMLEEAVDCEAQF 270
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
D L + G++ M Y+ +VAD L LG + NPF +MEL +Q TNFFE
Sbjct: 271 ADDLLSGGVAGLSVRDMRAYLGYVADSRLQRLGIAPHFKTKNPFSFMELQDVQELTNFFE 330
Query: 300 KRVGEYQKA 308
+RV YQ A
Sbjct: 331 RRVSAYQTA 339
>gi|356532684|ref|XP_003534901.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain A-like [Glycine max]
Length = 248
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 116/179 (64%), Gaps = 32/179 (17%)
Query: 111 EMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGI 170
+MYSLLLETYIK+S EK +LF A ET+PCVAKKA+WA +WI
Sbjct: 77 KMYSLLLETYIKDSREKYKLFNAIETLPCVAKKAEWAFSWIH------------------ 118
Query: 171 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL------LYSLLRNKLSEER 224
+FCAIFWLKK+GLMP LTF NELI RDEGL+CDFACL Y+LL+N LS
Sbjct: 119 ----NFCAIFWLKKKGLMPVLTFLNELIFRDEGLYCDFACLSQCIVIAYNLLQNPLSSYE 174
Query: 225 VKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLL----GALGCGKVYGV 279
V +V +A+ I+ +FVCD LPCAL+GMN ALMSQ+I+ V LL G L V GV
Sbjct: 175 VHKLVPQAIXIQTKFVCDVLPCALIGMNSALMSQHIKVVVYMLLVLKDGLLNEATVLGV 233
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,113,771,079
Number of Sequences: 23463169
Number of extensions: 201741522
Number of successful extensions: 552255
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2964
Number of HSP's successfully gapped in prelim test: 1355
Number of HSP's that attempted gapping in prelim test: 541252
Number of HSP's gapped (non-prelim): 4908
length of query: 329
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 187
effective length of database: 9,027,425,369
effective search space: 1688128544003
effective search space used: 1688128544003
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)