BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039934
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana
tabacum PE=2 SV=1
Length = 329
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/329 (87%), Positives = 302/329 (91%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADE 60
MP IPEEPLL +PDRFCMFPIQYP+IWEMYKKA ASFWTAEEVDLS D R WE+LT E
Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFITHVLAFFAASDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK+SDEKSRLFRA ET PCV KKA WAL WIDGSETFAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERVKGIV +AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG LMS+YIEFVADRLL ALG K+Y NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQKASVMSSLNGNG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329
>sp|Q6Y657|RIR2B_ARATH Putative ribonucleoside-diphosphate reductase small chain B
OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1
Length = 333
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 276/333 (82%), Positives = 306/333 (91%), Gaps = 4/333 (1%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
MPS+PEEP+LTP PDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD R WE SLT D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI HVLAFFAASDGIVLENL+ RFM +VQ+SEARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++ E+ LFRA ET+PCV KKA+WA+ WI+GS++FAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL E+R+K IV +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN LMSQYIEFVADRLL ALGC KVYGV+NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG---NHVFKMDEDF 329
KRVGEYQKAS+MSS++GN +HVFK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333
>sp|Q9LSD0|RIR2C_ARATH Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis
thaliana GN=TSO2 PE=2 SV=1
Length = 332
Score = 576 bits (1485), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/332 (86%), Positives = 306/332 (92%), Gaps = 3/332 (0%)
Query: 1 MPSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTAD 59
MPS+PEEPLLTP PDRFCMFPI YP+IWEMYKKAEASFWTAEEVDLSQD R WE SL
Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60
Query: 60 EKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLET 119
E+HFI HVLAFFAASDGIVLENLA+RFM +VQVSEARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK++ E+ LFRA ET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSEERVK IV +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN LMSQYIEFVADRLLGALG GKVYGVTNPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG--NHVFKMDEDF 329
KRVG+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
>sp|P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis
thaliana GN=RNR2A PE=1 SV=2
Length = 341
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/324 (76%), Positives = 273/324 (84%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++QWE+LT EKHFI+
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIVLENLAARF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IK+S
Sbjct: 78 HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF A ET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V IV EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LGC + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341
>sp|Q4KLN6|RIR2_RAT Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus
norvegicus GN=Rrm2 PE=2 SV=1
Length = 390
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 268/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PSI EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RVK I+ +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>sp|P07201|RIR2_SPISO Ribonucleoside-diphosphate reductase small chain OS=Spisula
solidissima PE=2 SV=2
Length = 384
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 266/324 (82%), Gaps = 2/324 (0%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EPLL NP RF + PIQY +IW+MYKKAEASFWTAEEVDLS+D+ WESL +EKHFI+H
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENL RF KEVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF A ET+PCV +KADWA+ WI D S ++AER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++S L NK S+ER+ I+ EAV+IE+ F+ +ALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYIEFVADRLL L C K+Y NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEY 361
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK VMS N G +H F +D DF
Sbjct: 362 QKMGVMSGGN-TGDSHAFTLDADF 384
>sp|P79733|RIR2_DANRE Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio
GN=rrm2 PE=1 SV=1
Length = 386
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/328 (70%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKH 62
++ EEPLL NP RF +FPIQY +IW+MYKKAEASFWTAEEVDLS+D++ W+SL +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
+S E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE VK I+ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKR 301
DALP L+GMN LM QYIEFVADRLL LG KVY V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKMDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>sp|P11157|RIR2_MOUSE Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus
GN=Rrm2 PE=1 SV=1
Length = 390
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K +E+RV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>sp|Q60561|RIR2_MESAU Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus
auratus GN=RRM2 PE=2 SV=1
Length = 386
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 267/329 (81%), Gaps = 9/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WE+L DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV+ I+ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMS + F +D DF
Sbjct: 366 RVGEYQRMGVMS--------NSFTLDADF 386
>sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens
GN=RRM2 PE=1 SV=1
Length = 389
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>sp|Q4R7Q7|RIR2_MACFA Ribonucleoside-diphosphate reductase subunit M2 OS=Macaca
fascicularis GN=RRM2 PE=2 SV=1
Length = 389
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
P + +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEEVDLS+DI+ WESL +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
+FI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV+ I+ AV +E+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFL 304
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG KV+ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>sp|O57175|RIR2_VACCA Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Ankara) GN=MVA032L PE=2 SV=1
Length = 319
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P11158|RIR2_VACCW Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Western Reserve) GN=VACWR043 PE=2 SV=1
Length = 319
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P20493|RIR2_VACCC Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Copenhagen) GN=F4L PE=2 SV=1
Length = 319
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P29883|RIR2_VACCP Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain L-IVP) GN=F14 PE=2 SV=1
Length = 319
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L PNP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W +T DEK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGF++AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M YIEFVADRL+ LG K+Y VTNPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>sp|Q9C167|RIR2_NEUCR Ribonucleoside-diphosphate reductase small chain OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=rnr-2 PE=3 SV=2
Length = 410
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/341 (66%), Positives = 267/341 (78%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADE 60
P EPLLT NP RF +FPI+Y EIW+MYKKAEASFWTAEE+DLS+D+ W + L DE
Sbjct: 72 PEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 131
Query: 61 KHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
K FI+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 KFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK +++ LF A +T+PC+ KKADWAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L N+ S++ ++ I+ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y TNPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKMDEDF 329
KRVG+YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVGDYQKAGVMNSTKKADADAEVAKNENGGD--FTFDEDF 410
>sp|O15910|RIR2_TRYBB Ribonucleoside-diphosphate reductase small chain OS=Trypanosoma
brucei brucei GN=RNR2 PE=2 SV=1
Length = 337
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLLT NPDR+ +FPI+YP+IW+ YK+AE+S WT EE+DL D+ WE L E+HFI
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ + D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + NKL +RV I+ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>sp|Q6PEE3|RIR2B_MOUSE Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus
GN=Rrm2b PE=1 SV=1
Length = 351
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW MYK+A+ASFWTAEEVDLS+D+ W L +DEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SE+RV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLLG LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q4R741|RIR2B_MACFA Ribonucleoside-diphosphate reductase subunit M2 B OS=Macaca
fascicularis GN=RRM2B PE=2 SV=1
Length = 351
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q5R9G0|RIR2B_PONAB Ribonucleoside-diphosphate reductase subunit M2 B OS=Pongo abelii
GN=RRM2B PE=2 SV=1
Length = 351
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q7LG56|RIR2B_HUMAN Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens
GN=RRM2B PE=1 SV=1
Length = 351
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+D+ W L ADEK+FI+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
H+LAFFAASDGIV ENL RF +EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF A ET+P V KKADWAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEERV+ I+ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG KV+ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|P33799|RIR2_VAR67 Ribonucleoside-diphosphate reductase small chain OS=Variola virus
(isolate Human/India/Ind3/1967) GN=C8L PE=2 SV=1
Length = 319
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 257/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L NP+RF +FPIQY +IW MYKKAEASFWT EEVD+S+DI W LT DEK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV ENLA RF EVQ++EAR FYGFQ+AIENIHSEMYSLL++TY+K+S+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF A ET+PCV KKADWA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ I+ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M Y+EFVADRL+ LG ++Y VTNP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P48592|RIR2_DROME Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila
melanogaster GN=RnrS PE=1 SV=2
Length = 393
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEK 61
PS+ EPLL NP RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D+ W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFI+HVLAFFAASDGIV ENL RF +EVQ++EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KNSDEKSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ ++ LF A ET+P V +KADWAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ I+++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKMDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>sp|O46310|RIR2_LEIAM Ribonucleoside-diphosphate reductase small subunit OS=Leishmania
amazonensis PE=3 SV=1
Length = 345
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
EEPL NP R+ +FPIQY +IW YK+ E+ WT EE+DL D++ W +L E+HFI
Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFA SDGIV+ENLA RFM +V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI +S+
Sbjct: 84 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 143
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL A +T+PC+ KKA+W + WI S +F +RLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 144 EKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKR 203
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S +++KL ERV I+ +AV IEREF+CDAL
Sbjct: 204 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 263
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYIEFVADRLL +LG K Y T PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 264 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 323
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 324 YQKAGVMST---EGTSKKFSLSEDF 345
>sp|P50650|RIR2_PLAF4 Ribonucleoside-diphosphate reductase small chain OS=Plasmodium
falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1
Length = 349
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 256/323 (79%), Gaps = 4/323 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E +L DRF ++PI YP++W+ YKKAEASFWTAEE+DLS D++ +E L +EKHFI H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIVLENLA++F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL NKL E+ ++ IVKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ + VF ++ +F
Sbjct: 331 KSGVMAQ----RKDQVFCLNTEF 349
>sp|P42521|RIR2_DICDI Ribonucleoside-diphosphate reductase small subunit OS=Dictyostelium
discoideum GN=rnrB-1 PE=2 SV=2
Length = 338
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 257/327 (78%), Gaps = 4/327 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWE-SLTADEKHFIT 65
EP+L N DRF +FPI+YP+IW MYKKA AS W AEE+DL D WE LT +E+HFI+
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
HVLAFFAASDGIV ENLA RFM EVQ+ EAR FYGFQIAIENIHSE YSLL+ETYIK+
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF A ET+PC+ KKA+WAL WI+ S++FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLM GLTFSNELISRDEGLHCDFACLLY+ L+ KL + ++ ++++AVE E+EF+C++LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIEF ADRL+ +LG K++ +NPF+WME+ISLQ K+NFFE +V EY
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 306 QKASV---MSSLNGNGGNHVFKMDEDF 329
K V ++ N + +DEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>sp|P50649|RIR2_PLAFG Ribonucleoside-diphosphate reductase small subunit OS=Plasmodium
falciparum (isolate FCR-3 / Gambia) GN=RNR2 PE=3 SV=1
Length = 322
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 251/323 (77%), Gaps = 6/323 (1%)
Query: 9 LLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVL 68
+L DRF ++PI YP+++ YKKAEA FWTAEE+D S D++ +E L +EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 69 AFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKS 128
AFFAASDGIVLENLA F++EVQ++EA+ FY FQIA+ENIHSE YSLL++ YIK+ E+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 129 RLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF A E +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEA--VEIEREFVCDALPC 246
GLTFSNELISRDEGLH DF CL+YSLL NKL E+ V+ IVKEA VE+E+ F+C++LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LGC K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 303
Query: 307 KASVMSSLNGNGGNHVFKMDEDF 329
K+ VM+ +HVF ++ +F
Sbjct: 304 KSGVMAQ----RKDHVFCLNTEF 322
>sp|Q9DHU2|RIR2_YLDV Ribonucleoside-diphosphate reductase small chain OS=Yaba-like
disease virus GN=20L PE=3 SV=1
Length = 325
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L P +++ +FPI Y +IW+MYKKA ASFWT EEVDLS+D W L+ +EK+FI H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFAASDGIV ENLA RF EVQ+SEAR FYGFQIA+ENIHSEMYSLL++TYI +S E
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A E + CV +KA+WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC+++ L N V+ I+ EAV IE+ F+ +A+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL LGC K Y NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSEY 305
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QK SVMS N ++VF +D DF
Sbjct: 306 QKMSVMS----NKKDNVFSLDIDF 325
>sp|P42170|RIR2_CAEEL Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis
elegans GN=rnr-2 PE=3 SV=1
Length = 381
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 248/325 (76%), Gaps = 5/325 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+EP+L +RF +FP+++ +IW YKKA ASFWT EEVDL +D+ WE + DE++FI+
Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 120
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
+LAFFAASDGIV ENL RF EVQVSEAR FYGFQIAIENIHSEMYS L+ETYI++
Sbjct: 121 RILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDET 180
Query: 126 EKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF A + + KKADWAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 181 ERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKK 240
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS L+ KL+++R+ I+K+AV IE+EF+ +AL
Sbjct: 241 RGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFLTEAL 300
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD LL LGC K+Y NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 301 PVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKRVSE 360
Query: 305 YQKASVMSSLNGNGGNHVFKMDEDF 329
YQ+ VM N F ++ DF
Sbjct: 361 YQRPGVMV----NEAERQFDLEADF 381
>sp|P36603|RIR2_SCHPO Ribonucleoside-diphosphate reductase small chain
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=suc22 PE=3 SV=2
Length = 391
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
+E +L PNP RF +FPI+Y EIW+ YKKAEASFWTAEE+DLS+D+ W++ L ADE++FI
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLA+FAASDGIV ENL RF EVQ+ EAR YGFQI IENIHSE YSLLL+TYI+
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F A T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+++ + V+ I+ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K Y VTNPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQ A VMS + +H F +DEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>sp|P09938|RIR2_YEAST Ribonucleoside-diphosphate reductase small chain 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR2 PE=1
SV=2
Length = 399
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 246/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKHFI 64
EEPLL + +R +FPI+Y EIW+ YK+AEASFWTAEE+DLS+DI W + + +E+ FI
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNS 124
+ VLAFFAASDGIV ENL F EVQ+ EA++FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF A T+P + +KA+WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+NK V+ IV EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKMDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 375 DYQKAGVMSKSTKQEAG--AFTFNEDF 399
>sp|Q8SRR2|RIR2_ENCCU Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0730 PE=3 SV=1
Length = 325
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 251/324 (77%), Gaps = 7/324 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL P +RF + PI+Y +IW+MYKKAE+SFWT EEV L +DI W L A E+HFI++
Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISY 67
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
VLAFFAASDGIV NL RF EV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+++DE
Sbjct: 68 VLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDE 127
Query: 127 KSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A T+P V +KADWA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 KNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+K +V +AVEIE++F+ ++LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSESLP 245
Query: 246 CALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM +YIEFVADRLL LG +VY TNPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKMDEDF 329
QKA V GN F++D DF
Sbjct: 306 QKAFV----GIENGNDSFRIDVDF 325
>sp|P32209|RIR2_SWPVK Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus
(strain Kasza) GN=C14L PE=3 SV=1
Length = 274
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/269 (65%), Positives = 216/269 (80%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
EP+L + RF +FPI+Y +IW+MYK++ ASFWT EEVDLS+D+ W+ LT DEK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFFA+SDGIV ENLA RF +VQ SEAR FYGFQIA+ENIHSEMYSLL++TY++++ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A ET+ CV KKADWA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L + S+E + I+ +AV IE+EF+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 247 ALVGMNGALMSQYIEFVADRLLGALGCGK 275
L+GMN LMSQYIEFVADRLL LGC K
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEK 270
>sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small chain OS=Red sea bream
iridovirus GN=RR-2 PE=3 SV=1
Length = 312
Score = 349 bits (895), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/318 (55%), Positives = 226/318 (71%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQW-ESLTADEKHFITHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+R W + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAARFMKEV-QVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFR 132
+DGIV +NL F KE+ + EARAFYGFQ+AIENIH+EMY+ L+ T + ++ + LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAA-LFS 119
Query: 133 AFETVPCVAKKADWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + NK ++ I+ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N M YI+FVADRLL ALG K+Y V+NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKMDEDF 329
+ + F M+E+F
Sbjct: 300 TP-----SSMEFTMNEEF 312
>sp|Q7T6Y9|RIR2_MIMIV Ribonucleoside-diphosphate reductase small chain OS=Acanthamoeba
polyphaga mimivirus GN=RNR2 PE=3 SV=2
Length = 417
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES-LTADEKH 62
I +EP+L+ +++ + PI+Y ++W+ YK ++WT EEVDL++D+ W + L+ D+++
Sbjct: 96 IMKEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRN 155
Query: 63 FITHVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FI HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL+L T++K
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215
Query: 123 NSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ +++L + +T+P + KKADW WI +T+A +L+AF+ VEG+FFSGSF +IFWL
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWL 275
Query: 183 KKRGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFV 240
K R + MPGL SN+ I+RDE H + AC++YSLL N+L E V I+ EA+EIE EF+
Sbjct: 276 KTREMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFI 335
Query: 241 CDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN LMSQYI++VADRLL LG K + V NPF++M+ I + K NFFEK
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEK 395
Query: 301 RVGEYQKASV 310
R Y A++
Sbjct: 396 RNDAYSNANI 405
>sp|P49723|RIR4_YEAST Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR4 PE=1
SV=1
Length = 345
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/308 (45%), Positives = 205/308 (66%), Gaps = 2/308 (0%)
Query: 6 EEPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFIT 65
+E LL N RF MFPI+Y EIW YKK EASFWTAEE++L++D ++ LT D+K +I
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + K+
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKSRLFRAFETVPCVAKKADWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+ +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTD 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDAL 244
+ +MPGL +N I RD G + DF+CLL++ LR K + + ++ I+ EAVEIE+E+ ++L
Sbjct: 203 KKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSL 262
Query: 245 PCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGE 304
P GM+ + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V +
Sbjct: 263 PVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSD 322
Query: 305 YQKASVMS 312
YQKAS MS
Sbjct: 323 YQKASDMS 330
>sp|P0C8I0|RIR2_ASFK5 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-056
PE=3 SV=1
Length = 327
Score = 257 bits (656), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 181/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL + RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S N + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L L C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYKVENPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P0C8I1|RIR2_ASFP4 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/South Africa/Pretoriuskop
Pr4/1996) GN=Pret-056 PE=3 SV=1
Length = 327
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EER + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P26713|RIR2_ASFM2 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/Malawi/Lil 20-1/1983)
GN=Mal-052 PE=3 SV=1
Length = 327
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P0C8I2|RIR2_ASFWA Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Warthog/Namibia/Wart80/1980)
GN=War-054 PE=3 SV=1
Length = 327
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KSRLFRAFETVPCVAKKADWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P42492|RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (strain Badajoz 1971 Vero-adapted)
GN=Ba71V-044 PE=3 SV=1
Length = 334
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLTPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITH 66
E LL N RF +FPIQ+PE W YKK E+ WTA+EVD+ +DI WE++ ++ F
Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 68
Query: 67 VLAFFAASDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDE 126
+LAFF +D IV+ENL FM+E++V E FY Q A E +HSE YS+ ++T I + E
Sbjct: 69 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 128
Query: 127 KSRLFRAFETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F E P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 129 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 188
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEER-VKGIVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + I+KEAVE+ EF+ A
Sbjct: 189 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 248
Query: 245 PCA---LVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQ--GKTNFFE 299
A + G + ++ QYI + D L + C +Y V NPF M L KTNFFE
Sbjct: 249 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 308
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 309 LRPTQYQ 315
>sp|O84835|RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=nrdB PE=1 SV=1
Length = 346
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
Query: 19 MFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES--LTADEKHFITHVLAFFAASDG 76
+ PI+Y WE Y A+ W E+ + +DI W+S L+ DE+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAES 90
Query: 77 IVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFET 136
+V N+ K V EAR + Q E +H+ + + E+ DEK +F A+
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESL--GLDEKE-IFNAYNE 147
Query: 137 VPCVAKKADWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWL 182
+ K D+ + + ++G + F + L+ + + EGIFF F I
Sbjct: 148 RAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEI 235
++ M G+ + I RDE +H +F L + ++ + E + + ++K AV++
Sbjct: 208 HRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDL 267
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWM-ELISLQGK 294
E E+ D LP ++G+ ++ Y++ +ADR L +G +Y NPF WM E I L +
Sbjct: 268 EIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKE 327
Query: 295 TNFFEKRVGEYQKASVMS 312
NFFE RV EYQ A+ ++
Sbjct: 328 KNFFETRVIEYQHAASLT 345
>sp|Q9PL92|RIR2_CHLMU Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=nrdB PE=3 SV=1
Length = 346
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
Query: 19 MFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES--LTADEKHFITHVLAFFAASDG 76
+ PI+Y WE Y A+ W E+ + +DI W+S L+ DE+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAES 90
Query: 77 IVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFET 136
+V N+ K V EAR + Q E +H+ + + E+ DEK +F A+
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESL--GLDEKE-IFNAYNE 147
Query: 137 VPCVAKKADWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWL 182
+ K D+ + + ++G + F + L+ + + EGIFF F I
Sbjct: 148 RASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEI 235
++ M G+ + I RDE +H +F L + ++ + E + + +++ AV++
Sbjct: 208 HRQNKMVGIGEQYQYILRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDL 267
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWM-ELISLQGK 294
E ++ D LP ++G+ ++ Y++ +ADR L +G +Y NPF WM E I L +
Sbjct: 268 EIDYARDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKE 327
Query: 295 TNFFEKRVGEYQKASVMS 312
NFFE RV EYQ A+ ++
Sbjct: 328 KNFFETRVTEYQHAASLT 345
>sp|Q9Z6S4|RIR2_CHLPN Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
pneumoniae GN=nrdB PE=3 SV=1
Length = 346
Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 152/318 (47%), Gaps = 27/318 (8%)
Query: 19 MFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWES--LTADEKHFITHVLAFFAASDG 76
+ PI+Y WE Y A+ W EV +++DI W+S L+ DE+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 77 IVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFET 136
+V N+ K + EAR + Q E +H+ + + E+ + E +F A+
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147
Query: 137 VPCVAKKADWALNWI-------------DGSETFAERLIAFACV-EGIFFSGSFCAIFWL 182
+ K D+ + +G F + L+ + + EGIFF F I
Sbjct: 148 RASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSE-------ERVKGIVKEAVEI 235
++ M G+ + I RDE +H +F L + ++ + E E + ++++AVE+
Sbjct: 208 HRQNKMTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVEL 267
Query: 236 EREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWM-ELISLQGK 294
E E+ D LP ++G+ ++ Y+ +ADR L +G +Y NPF WM E + L +
Sbjct: 268 EIEYAKDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIYHSRNPFPWMSETMDLNKE 327
Query: 295 TNFFEKRVGEYQKASVMS 312
NFFE RV EYQ A +S
Sbjct: 328 KNFFETRVTEYQTAGNLS 345
>sp|Q77MS0|RIR2_GAHVM Ribonucleoside-diphosphate reductase small chain OS=Gallid
herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) GN=MDV053
PE=3 SV=1
Length = 343
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 144/290 (49%), Gaps = 12/290 (4%)
Query: 25 PEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIV---LEN 81
P+I + + + WT E +S D+R LT +E++F + F +A+D +V ++N
Sbjct: 51 PDIGHLRALSIMNRWTETEFVISDDLRDVSMLTEEERYFYRFLFTFLSAADDLVNLNIDN 110
Query: 82 LAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL-LETYIKNSDEKSRLFRAFETVPCV 140
L F ++ + +Y Q IE +HS YS++ L + +S ++ + P +
Sbjct: 111 LLGLFSQK----DIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPAI 166
Query: 141 AKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 200
K DW + + AE+ I +EGIFFS SF AI +L+ L N LISR
Sbjct: 167 QSKLDWLNKRVIECSSIAEKYILMILIEGIFFSASFAAIAYLRINNLFVVTCQINNLISR 226
Query: 201 DEGLHCDFACLLYS--LLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQ 258
DE +H + +C ++ L+ K S RV+ + KEAV+IE F+ A P ++ +
Sbjct: 227 DEAIHVEASCCIFKNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLDVEAICS 286
Query: 259 YIEFVADRLLGALGCGKVYGVTNPF-DW-MELISLQGKTNFFEKRVGEYQ 306
Y+ + ADRLL L +Y P D+ + L++ TNFFE+R Y
Sbjct: 287 YVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYS 336
>sp|Q6UDJ1|RIR2_PSHV1 Ribonucleoside-diphosphate reductase small chain OS=Psittacid
herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997)
GN=UL40 PE=3 SV=1
Length = 313
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 150/295 (50%), Gaps = 21/295 (7%)
Query: 25 PEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIV---LEN 81
P++ E+ + A+ W E+ ++D + + LT DE F V F AA+D +V L+N
Sbjct: 18 PDMRELRDLSIANNWNEFELCYARDEKDVDCLTEDECDFYKFVFCFLAAADDLVNVNLDN 77
Query: 82 LAARF-MKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVP-- 138
L F K++Q +Y QI IE +HS YS + + +N D +R E V
Sbjct: 78 LVTLFPQKDIQ-----HYYAEQIRIETVHSRTYSAVQLVFFRN-DAIARDRYVLEAVKDG 131
Query: 139 CVAKKADWALNWI--DGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 195
+ +K DW L+ I +G E T E+ I +EGIFF SF AI +L++ + SN
Sbjct: 132 AIRRKIDW-LSRIQNEGDELTLPEKYILMILIEGIFFVSSFAAISYLRRHSIFQVTCQSN 190
Query: 196 ELISRDEGLHCDFACLLYSLL---RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMN 252
+LISRDE +H +C +Y+ K S +R+ + KEAVEIE +F+ P A ++
Sbjct: 191 DLISRDETIHTTASCCIYNNWLKGHPKPSVKRIHQLFKEAVEIECDFLVARAPKAARLID 250
Query: 253 GALMSQYIEFVADRLLGALGCGKVYG--VTNPFDWMELISLQGKTNFFEKRVGEY 305
+ ++ F A+R L +G +Y +P + L+SL+ NFFE R Y
Sbjct: 251 IDAIQSFVRFTANRWLSMIGVPTIYDDPAPDPTFPLALMSLEKNVNFFEHRSTAY 305
>sp|Q6R7K3|RIR2_OSHVF Ribonucleoside-diphosphate reductase small chain OS=Ostreid
herpesvirus 1 (isolate France) GN=ORF20 PE=3 SV=1
Length = 579
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 13/312 (4%)
Query: 15 DRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAAS 74
D + P Y ++ + K E+S W E+D DI WE ++ +E+ + VLAFFA
Sbjct: 70 DHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVG 129
Query: 75 DGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAF 134
D +V + +A F E + E + F +Q E +H +Y+ L+ +K+ + L A+
Sbjct: 130 DTLVKDRIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAY 188
Query: 135 ---ETVPCVAKKADWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPG 190
E P + KK DW I +++ E ++ C E I F+ SF AI + M
Sbjct: 189 KDPEFAP-IKKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMRA 246
Query: 191 LTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVG 250
L NE I RDE LH F L L+ ++ S+ER+ ++ EA EIE EF +P +
Sbjct: 247 LVLGNEFIRRDETLHFRFYAELLRLMPDRPSDERIAELLTEATEIELEFAEYVVPEGVKY 306
Query: 251 MNGALMSQYIEFVADRLLGALGCGKVY------GVTNPFDWMELISLQGKTNFFEKRVGE 304
+ + Q+++ +++ L +Y + +P +M + + K NFFE + E
Sbjct: 307 ITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQKINFFEGKATE 366
Query: 305 YQKASVMSSLNG 316
Y N
Sbjct: 367 YNTKQYKVDFNN 378
>sp|Q66662|RIR2_EHV2 Ribonucleoside-diphosphate reductase small chain OS=Equine
herpesvirus 2 (strain 86/87) GN=60 PE=3 SV=1
Length = 305
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 143/275 (52%), Gaps = 7/275 (2%)
Query: 39 WTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAARFMKEVQVSEARAF 98
W ++ L+ D+ +SL + F + +F A ++ +V N+ A + + + +
Sbjct: 28 WFPSQISLTSDVACLQSLNPRDLEFYKFLFSFLAMAEKLVNFNIQA-LVADFHSHDLEHY 86
Query: 99 YGFQIAIENIHSEMYSLLLETYIKNS-DEKSRLFRAFETVPCVAKKADWALNWIDGSETF 157
Y Q A+ENIH ++Y+ +L + KN+ E + R +A K W + ++T
Sbjct: 87 YTEQEAMENIHGKVYANILNMFFKNNVGEMQKYAREIVGDEALAAKLHWLHGRVSEAKTR 146
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 216
AE+++ F +EGIFF SF +I L+ RGLM G+ +N+ ISRDE +H A LL++ L
Sbjct: 147 AEKVLVFLLIEGIFFISSFYSIATLRVRGLMNGVCMANDYISRDEWVHTRAAALLFNTLV 206
Query: 217 --RNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCG 274
K S E + + +EAVE+E F+ A + +N A +++++E ADR+L ++ G
Sbjct: 207 PDEEKPSPEWIGALFREAVEVEYNFIL-AKGRGVSHVNVADINRFLEATADRILKSINVG 265
Query: 275 KVYGVTNPFDW-MELISLQGKTNFFEKRVGEYQKA 308
VYG P + + NFFE+ +Y A
Sbjct: 266 PVYGTQPPPNCPLVYTGCLKNVNFFERESSDYTTA 300
>sp|P50645|RIR2_SUHVK Ribonucleoside-diphosphate reductase small chain OS=Suid
herpesvirus 1 (strain Kaplan) GN=RR2 PE=3 SV=1
Length = 303
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 7/294 (2%)
Query: 23 QYPEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENL 82
Q P++ + + A+ W ++ L D + +L+ E F + AF +A+D +V NL
Sbjct: 8 QCPDMDHLRSLSVANRWLETDLPLGDDAKDVAALSEPELEFYRFLFAFLSAADDLVNVNL 67
Query: 83 AARFMKEVQVSEARAFYGFQIAIENIHSEMYSLL-LETYIKNSDEKSRLFRAFETVPCVA 141
+ + + +Y Q IE +HS +YS + L + ++ + R RA +
Sbjct: 68 GS-LSELFTQKDILHYYIEQECIEVVHSRVYSAIQLMLFRGDAAARERYVRAALRDEAIR 126
Query: 142 KKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 201
+K +W + + + AE+ + +EGIFF+ SF +I +L+ L SN+ ISRD
Sbjct: 127 RKVEWLDSRVAECASVAEKYLLMILIEGIFFASSFASISYLRTHNLFVVTCQSNDFISRD 186
Query: 202 EGLHCDFACLLYSLLRN---KLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQ 258
E +H +C +Y+ + E R+ + EAVEIE EF+ P + ++ +
Sbjct: 187 EAIHTSASCCIYNNYLGDAPRPDEARIHQLFAEAVEIECEFLRARAPRDSLLLDLPAIIS 246
Query: 259 YIEFVADRLLGALGCGKVYGVTNP-FDW-MELISLQGKTNFFEKRVGEYQKASV 310
Y+ + ADRLL A+G ++G P D+ M L+ + TNFFE+R Y V
Sbjct: 247 YVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERRSTNYTGTVV 300
>sp|Q4JQV7|RIR2_VZVO Ribonucleoside-diphosphate reductase small chain
OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF18
PE=1 SV=1
Length = 306
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 12/288 (4%)
Query: 25 PEIWEMYKKAEASFWTAEEVDLSQDIRQWESLTADEKHFITHVLAFFAASDGIVLENLAA 84
P+I + + ++ W + + D + + LT DE F + F +A+D +V NL +
Sbjct: 16 PDINNLRALSISNRWLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNLGS 75
Query: 85 RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETV--PCVAK 142
+ + +Y Q IE +H+ +YS + + + DE R+ T+ P + +
Sbjct: 76 -LTQLFSQKDIHHYYIEQECIEVVHARVYSQI-QLMLFRGDESLRVQYVNVTINNPSIQQ 133
Query: 143 KADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
K W + + + AE+ I +EGIFF SF AI +L+ GL N+LISRDE
Sbjct: 134 KVQWLEEKVRDNPSVAEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDE 193
Query: 203 GLHCDFACLLY-SLLRNKLSEERVKGIVKEAVEIEREFVCDALP-CALVGMNGALMSQYI 260
+H +C +Y + + K + R+ + EAVEIE F+ P LV ++ ++QY+
Sbjct: 194 AIHTSASCCIYNNYVPEKPAITRIHQLFSEAVEIECAFLKSHAPKTRLVNVDA--ITQYV 251
Query: 261 EFVADRLLGALGCGKVYGVTNP---FDWMELISLQGKTNFFEKRVGEY 305
+F ADRLL A+ K++ P F +I+ TNFFE+ Y
Sbjct: 252 KFSADRLLSAINVPKLFNTPPPDSDFPLAFMIA-DKNTNFFERHSTSY 298
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,951,817
Number of Sequences: 539616
Number of extensions: 4805313
Number of successful extensions: 10943
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 10675
Number of HSP's gapped (non-prelim): 131
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)