BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039937
(208 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 95 TSSKNGLLDLEYEARAFDFGIAKFFKL-DSSNRTELAGTYGYIALELTYTLKVAKKCGMH 153
+ N LLD E+EA DFG+AK D + GT G+IA E T K ++K +
Sbjct: 168 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVF 227
Query: 154 SSGLLALEVMKGK 166
G++ LE++ G+
Sbjct: 228 GYGVMLLELITGQ 240
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S D VT DE I + + L + H +++ ++I S N LL ++ +
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK----SDNILLGMDGSVKLT 158
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG + S R+E+ GT ++A E+ K + S G++A+E+++G+ P
Sbjct: 159 DFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S D VT DE I + + L + H +++ ++I S N LL ++ +
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK----SDNILLGMDGSVKLT 158
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG + S R+ + GT ++A E+ K + S G++A+E+++G+ P
Sbjct: 159 DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 95 TSSKNGLLDLEYEARAFDFGIAKFFKL-DSSNRTELAGTYGYIALELTYTLKVAKKCGMH 153
+ N LLD E+EA DFG+AK D + G G+IA E T K ++K +
Sbjct: 160 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVF 219
Query: 154 SSGLLALEVMKGKH 167
G++ LE++ G+
Sbjct: 220 GYGVMLLELITGQR 233
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S D VT DE I + + L + H +++ ++I S N LL ++ +
Sbjct: 104 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK----SDNILLGMDGSVKLT 159
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG + S R+ + GT ++A E+ K + S G++A+E+++G+ P
Sbjct: 160 DFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S D VT DE I + + L + H +++ ++I S N LL ++ +
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK----SDNILLGMDGSVKLT 158
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG + S R+ + GT ++A E+ K + S G++A+E+++G+ P
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S D VT DE I + + L + H +++ + I S N LL ++ +
Sbjct: 104 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK----SDNILLGMDGSVKLT 159
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG + S R+ + GT ++A E+ K + S G++A+E+++G+ P
Sbjct: 160 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N +LD E + DFG+ K +D E GT YIA E+ K + G+L
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 159 ALEVMKGKHP 168
E++ G+ P
Sbjct: 210 LYEMLAGQPP 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD + + DFG+ K L + E GT YIA E+ K S G+L
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 208
Query: 159 ALEVMKGKHPRH 170
E++ G+ P H
Sbjct: 209 LYEMLIGQSPFH 220
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S I R+ N E I Q + L Y H + + ++I + N LL+ E A+
Sbjct: 112 SDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK----AGNILLNTEGHAKLA 167
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG+A + R + GT ++A E+ + + S G+ A+E+ +GK P
Sbjct: 168 DFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 64 DEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD 122
DE I + ++ L Y H EK + ++I + N LL + + + DFG+A
Sbjct: 118 DEFQIATMLKEILKGLDYLHSEKKIHRDIK----AANVLLSEQGDVKLADFGVAGQLTDT 173
Query: 123 SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
R GT ++A E+ K + S G+ A+E+ KG+ P
Sbjct: 174 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D V+ +E I + V+ L Y H + ++ ++I S + LL L+ + DFG
Sbjct: 131 DIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK----SDSILLTLDGRVKLSDFG 186
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
D R L GT ++A E+ A + + S G++ +E++ G+ P
Sbjct: 187 FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 35.0 bits (79), Expect = 0.026, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 4 LSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNS 53
L+ ID+S N L GPIP+ F P N LCG P C N+
Sbjct: 706 LTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRCDPSNA 753
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD + + DFG+ K L + GT YIA E+ K S G+L
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 207
Query: 159 ALEVMKGKHPRH 170
E++ G+ P H
Sbjct: 208 LYEMLIGQSPFH 219
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNS 53
+ L+ ID+S N L GPIP+ F P N LCG P C N+
Sbjct: 700 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG--YPLPRCDPSNA 750
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N +LD E + DFG+ K D GT YIA E+ K + G+L
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 159 ALEVMKGKHP 168
E++ G+ P
Sbjct: 532 LYEMLAGQAP 541
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 64 DEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD 122
DE I + ++ L Y H EK + ++I + N LL E + DFG+A
Sbjct: 117 DETQIATILREILKGLDYLHSEKKIHRDIK----AANVLLSEHGEVKLADFGVAGQLTDT 172
Query: 123 SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
R GT ++A E+ K + S G+ A+E+ +G+ P
Sbjct: 173 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RTEL GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N +LD E + DFG+ K D GT YIA E+ K + G+L
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 159 ALEVMKGKHP 168
E++ G+ P
Sbjct: 211 LYEMLAGQAP 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 53 SRIDRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAF 111
S +D + DE I + ++ L Y H EK + ++I + N LL E +
Sbjct: 91 SALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK----AANVLLSEHGEVKLA 146
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG+A R GT ++A E+ K + S G+ A+E+ +G+ P
Sbjct: 147 DFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 64 DEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD 122
DE I + ++ L Y H EK + ++I + N LL E + DFG+A
Sbjct: 102 DETQIATILREILKGLDYLHSEKKIHRDIK----AANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 123 SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
R GT ++A E+ K + S G+ A+E+ +G+ P
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 109 RAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ DFG+A+ FK D + T AGT Y+A E+ + V KC + S+G++ ++ G P
Sbjct: 167 KIIDFGLAELFKSD-EHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 64 DEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD 122
DE I + ++ L Y H EK + ++I + N LL E + DFG+A
Sbjct: 122 DETQIATILREILKGLDYLHSEKKIHRDIK----AANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 123 SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
R GT ++A E+ K + S G+ A+E+ +G+ P
Sbjct: 178 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 83 LEKLLRQEISF-TTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELT 141
LE L ++I + +N LLD + DFG AK+ L GT YIA E+
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPEVV 175
Query: 142 YTLKVAKKCGMHSSGLLALEVMKGKHP 168
T K S G+L E++ G P
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 217
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 218 VWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 220 VWSFGVLLWELMTRGAP 236
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L H + ++ ++I S + LL + + DFG
Sbjct: 237 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK----SDSILLTHDGRVKLSDFG 292
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A EL L + + S G++ +E++ G+ P
Sbjct: 293 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 165 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 224
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 225 VWSFGVLLWELMTRGAP 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 220 VWSFGVLLWELMTRGAP 236
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L H + ++ ++I S + LL + + DFG
Sbjct: 160 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK----SDSILLTHDGRVKLSDFG 215
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A EL L + + S G++ +E++ G+ P
Sbjct: 216 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 220
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 221 VWSFGVLLWELMTRGAP 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 161 AARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 220
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 221 VWSFGVLLWELMTRGAP 237
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L Y H + ++ ++I S + LL + + DFG
Sbjct: 131 DIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK----SDSILLTSDGRIKLSDFG 186
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A E+ L + + S G++ +E++ G+ P
Sbjct: 187 FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L H + ++ ++I S + LL + + DFG
Sbjct: 115 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK----SDSILLTHDGRVKLSDFG 170
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A EL L + + S G++ +E++ G+ P
Sbjct: 171 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFF---KLDSS-NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + DS N+T ++ALE T K K
Sbjct: 219 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 279 VWSFGVLLWELMTRGAP 295
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L H + ++ ++I S + LL + + DFG
Sbjct: 117 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK----SDSILLTHDGRVKLSDFG 172
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A EL L + + S G++ +E++ G+ P
Sbjct: 173 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 96 SSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSS 155
+KN LL++ + DFG++ FF D R L GT YIA E+ K +KC + S
Sbjct: 180 ENKNSLLNI----KIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVLKK-KYNEKCDVWSC 233
Query: 156 GLLALEVMKGKHP 168
G++ ++ G P
Sbjct: 234 GVIMYILLCGYPP 246
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT+L GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + E + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 206
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 207 MYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + E + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 206
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 207 MYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + E + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 151 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 210
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 211 MYTLLVGKPP 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L H + ++ ++I S + LL + + DFG
Sbjct: 106 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK----SDSILLTHDGRVKLSDFG 161
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A EL L + + S G++ +E++ G+ P
Sbjct: 162 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 56 DRVTNNFDDEHCIGKDGQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFG 114
D VT+ +E I V+ L H + ++ ++I S + LL + + DFG
Sbjct: 110 DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK----SDSILLTHDGRVKLSDFG 165
Query: 115 IAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
+ R L GT ++A EL L + + S G++ +E++ G+ P
Sbjct: 166 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 97 SKNGLLDLEYEARAFDFGIA----KFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGM 152
S N LLD + A+ DFG+A KF + +R + GT Y+A E ++ K +
Sbjct: 161 SANILLDEAFTAKISDFGLARASEKFAQTVMXSR--IVGTTAYMAPE-ALRGEITPKSDI 217
Query: 153 HSSGLLALEVMKG 165
+S G++ LE++ G
Sbjct: 218 YSFGVVLLEIITG 230
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + + + DFG+A + D + +L GT YIA E+ + + + S G +
Sbjct: 156 NLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCI 215
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 216 LYTLLVGKPP 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT+L GT Y+ E+ +K + S G+
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 200 LCYEFLVGKPP 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT+L GT Y+ E+ +K + S G+
Sbjct: 138 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 196 LCYEFLVGKPP 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + + + DFG+A + D + +L GT YIA E+ + + + S G +
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCI 231
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 232 LYTLLVGKPP 241
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + E + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 171 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 230
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 231 MYTLLVGKPP 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT+L GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 88 RQEISFTTSSKNGLLDLEYEARAFDFGIAKF-FKLDSSNRTELA-GTYGYIALELTYTLK 145
R I S N LLD + + DFGI+K +LD ++ + GT GYI E +
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 146 VAKKCGMHSSGLLALEVM 163
+ +K ++S G++ EV+
Sbjct: 218 LTEKSDVYSFGVVLFEVL 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + E + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 169 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 228
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 229 MYTLLVGKPP 238
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 192 CGIVLTAMLAGELP 205
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L
Sbjct: 106 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDE 161
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHPR 169
E GT Y++ E + + + S GL +E+ G++PR
Sbjct: 162 MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + E + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 145 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 204
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 205 MYTLLVGKPP 214
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 97 SKNGLLDLEYEARAFDFGIA----KFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGM 152
S N LLD + A+ DFG+A KF + +R + GT Y A E ++ K +
Sbjct: 152 SANILLDEAFTAKISDFGLARASEKFAQXVXXSR--IVGTTAYXAPE-ALRGEITPKSDI 208
Query: 153 HSSGLLALEVMKG 165
+S G++ LE++ G
Sbjct: 209 YSFGVVLLEIITG 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 82 HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELT 141
H E+ + ++I + N LL + + + DFG+A R GT ++A E+
Sbjct: 133 HSERKIHRDIK----AANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 142 YTLKVAKKCGMHSSGLLALEVMKGKHP 168
K + S G+ A+E+ KG+ P
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 97 SKNGLLDLEYEARAFDFGIA----KFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGM 152
S N LLD + A+ DFG+A KF + R + GT Y+A E ++ K +
Sbjct: 155 SANILLDEAFTAKISDFGLARASEKFAQXVMXXR--IVGTTAYMAPE-ALRGEITPKSDI 211
Query: 153 HSSGLLALEVMKG 165
+S G++ LE++ G
Sbjct: 212 YSFGVVLLEIITG 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 193 CGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNR--TELAGTYGYIALELTYTLKV-AKKCGMHS 154
+N LLD + DFG+A F+ ++ R ++ GT Y+A EL + A+ + S
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 155 SGLLALEVMKGKHP 168
G++ ++ G+ P
Sbjct: 194 CGIVLTAMLAGELP 207
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 97 SKNGLLDLEYEARAFDFGIA----KFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGM 152
S N LLD + A+ DFG+A KF + R + GT Y+A E ++ K +
Sbjct: 161 SANILLDEAFTAKISDFGLARASEKFAQTVMXXR--IVGTTAYMAPE-ALRGEITPKSDI 217
Query: 153 HSSGLLALEVMKG 165
+S G++ LE++ G
Sbjct: 218 YSFGVVLLEIITG 230
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 163 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 221 LCYEFLVGKPP 231
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK--FFKLDSS--NRTELAGTYGYIALELTYTLKVAKKCG 151
+++N +LD ++ + DFG+A+ + K S N+T ++ALE T K K
Sbjct: 159 AARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSD 218
Query: 152 MHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 219 VWSFGVLLWELMTRGAP 235
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTE-LAGTYGYIALELTYTLKVAKKCGMHSSG 156
+N L+D + FDFGIAK S +T + GT Y + E + ++S G
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199
Query: 157 LLALEVMKGKHP 168
++ E++ G+ P
Sbjct: 200 IVLYEMLVGEPP 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 198 LCYEFLVGKPP 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 141 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 199 LCYEFLVGKPP 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 136 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 193
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 194 LCYEFLVGKPP 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 200 LCYEFLVGKPP 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 134 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 191
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 192 LCYEFLVGKPP 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 200 LCYEFLVGKPP 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + + + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCI 231
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 232 LYTLLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N L+ + + + DFG+A + D + L GT YIA E+ + + + S G +
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCI 231
Query: 159 ALEVMKGKHP 168
++ GK P
Sbjct: 232 LYTLLVGKPP 241
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 154 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 211
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 212 LCYEFLVGKPP 222
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 97 SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
S N L+D +Y + DFG+++ + AGT ++A E+ +K ++S G
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 157 LLALEVMKGKHP 168
++ E+ + P
Sbjct: 227 VILWELATLQQP 238
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 198 LCYEFLVGKPP 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK Q + N L++ E + DFG++ +L S
Sbjct: 113 EEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 168
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E + + + S GL +E+ G++P
Sbjct: 169 MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L+GT Y+ E+ +K + S G+
Sbjct: 138 ENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 196 LCYEFLVGKPP 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 112 DFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
DFG+A+ + + + AG Y ++A E+ +K + S G+L E++ G+ P
Sbjct: 159 DFGLAR--EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 159 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 217 SDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 218 SDVWSFGVLLWELMTRGAP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 179 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 236
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 237 SDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 218 SDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 178 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 235
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 236 SDVWSFGVLLWELMTRGAP 254
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 214
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 215 SDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 152 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 209
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 210 SDVWSFGVLLWELMTRGAP 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 155 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 212
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 213 SDVWSFGVLLWELMTRGAP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 96 SSKNGLLDLEYEARAFDFGIAK------FFKLDSSNRTELAGTYGYIALELTYTLKVAKK 149
+++N +LD ++ + DFG+A+ ++ + N+T ++ALE T K K
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 150 CGMHSSGLLALEVMKGKHP 168
+ S G+L E+M P
Sbjct: 216 SDVWSFGVLLWELMTRGAP 234
>pdb|3VCY|A Chain A, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin.
pdb|3VCY|B Chain B, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin.
pdb|3VCY|C Chain C, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin.
pdb|3VCY|D Chain D, Structure Of Mura (Udp-N-Acetylglucosamine Enolpyruvyl
Transferase), From Vibrio Fischeri In Complex With
Substrate Udp-N- Acetylglucosamine And The Drug
Fosfomycin
Length = 430
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 32 LQGNKRLCGDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEK 85
++GN +CGD G +V + + R + + CI K G+ +V ++ YH+++
Sbjct: 348 IEGNTAICGDTDGLSGAQVMATDL-RASASLVIAGCIAK-GETIVDRI-YHIDR 398
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD E + D+G+ K + GT YIA E+ + G+L
Sbjct: 140 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 199
Query: 159 ALEVMKGKHP 168
E+M G+ P
Sbjct: 200 MFEMMAGRSP 209
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 88 RQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA----GTYGYIALELTYT 143
R I S N LLD + + DFGI+K K +T L GT GYI E
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 144 LKVAKKCGMHSSGLLALEVM 163
++ +K ++S G++ EV+
Sbjct: 216 GRLTEKSDVYSFGVVLFEVL 235
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E +K + S G+
Sbjct: 142 ENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGV 199
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 200 LCYEFLVGKPP 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 30.0 bits (66), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 97 SKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSG 156
S N L+D +Y + DFG+++ AGT ++A E+ +K ++S G
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 157 LLALEVMKGKHP 168
++ E+ + P
Sbjct: 227 VILWELATLQQP 238
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R +L GT Y+ E+ +K + S G+
Sbjct: 163 ENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 221 LCYEFLVGKPP 231
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD E + DFG+ K + GT YIA E+ + + G+L
Sbjct: 154 NVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVL 213
Query: 159 ALEVMKGKHP 168
E++ G P
Sbjct: 214 LYEMLCGHAP 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 82 HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELT 141
H +K++ ++I +N LL E + DFG + SS R L GT Y+ E+
Sbjct: 125 HSKKVIHRDIK----PENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMI 178
Query: 142 YTLKVAKKCGMHSSGLLALEVMKGKHP 168
+K + S G+L E + GK P
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD E + D+G+ K + GT YIA E+ + G+L
Sbjct: 136 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 195
Query: 159 ALEVMKGKHP 168
E+M G+ P
Sbjct: 196 MFEMMAGRSP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R +L GT Y+ E+ +K + S G+
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 198 LCYEFLVGKPP 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD E + D+G+ K + GT YIA E+ + G+L
Sbjct: 183 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL 242
Query: 159 ALEVMKGKHP 168
E+M G+ P
Sbjct: 243 MFEMMAGRSP 252
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 99 NGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLL 158
N LLD E + D+G+ K + GT YIA E+ + G+L
Sbjct: 151 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 210
Query: 159 ALEVMKGKHP 168
E+M G+ P
Sbjct: 211 MFEMMAGRSP 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 103 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 158
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 198 LCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + +FG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 139 ENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 197 LCYEFLVGKPP 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 139 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 197 LCYEFLVGKPP 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + +FG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 140 ENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 198 LCYEFLVGKPP 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 103 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 158
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 103 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 158
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 137 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 195 LCYEFLVGKPP 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 103 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 158
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 103 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 158
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 65 EHCIGKDGQGVVTKLRYHLEK--LLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLD 122
E +GK V+ L Y EK ++ +++ N L++ E + DFG++ +L
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHKIMHRDVK----PSNILVNSRGEIKLCDFGVSG--QLI 218
Query: 123 SSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
S GT Y++ E + + + S GL +E+ G++P
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 140 ENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 198 LCYEFLVGKPP 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS RT L GT Y+ E+ +K + S G+
Sbjct: 141 ENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 158 LALEVMKGKHP 168
L E + G P
Sbjct: 199 LCYEFLVGMPP 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 138 ENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 158 LALEVMKGKHP 168
L E + GK P
Sbjct: 196 LCYEFLVGKPP 206
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 57 RVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIA 116
R F + H Q V+T H L+ +++ +N L+D + + DFG A
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK----PENLLIDQQGYIQVTDFGFA 188
Query: 117 KFFKLDSSNRT-ELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
K K RT LAGT Y+A E+ + K + G+L E+ G P
Sbjct: 189 KRVK----GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 109 RAFDFGIAKFFKLDSSNR-TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH 167
+ D G AK +LD TE GT Y+A EL K S G LA E + G
Sbjct: 164 KIIDLGYAK--ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
Query: 168 P 168
P
Sbjct: 222 P 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 109 RAFDFGIAKFFKLDSSNR-TELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKH 167
+ D G AK +LD TE GT Y+A EL K S G LA E + G
Sbjct: 165 KIIDLGYAK--ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
Query: 168 P 168
P
Sbjct: 223 P 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 130 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 185
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 171
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 1 MHWLSRIDISYNALQGPIPDSTTFRDAPMKALQGNKRLCGDIRGFPSC 48
+ +L +++S+N L G IP + + A NK LCG P+C
Sbjct: 267 LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS--PLPAC 312
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 65 EHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSS 124
E +GK V+ L Y EK + + N L++ E + DFG++ +L S
Sbjct: 122 EQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDS 177
Query: 125 NRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y++ E + + + S GL +E+ G++P
Sbjct: 178 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 72 GQGVVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELA 130
G +V+ L Y H ++ ++I +N +LD + + DFG+ K D +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKL----ENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
Query: 131 GTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 27/170 (15%)
Query: 20 DSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNF--DDEHCIGKDGQGVVT 77
D + +A + L L +++ + ++ IDR E+C G D V+T
Sbjct: 40 DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT 99
Query: 78 K---LRYHLEK--LLRQEISFTTSSK--------------------NGLLDLEYEARAFD 112
K R +L++ +LR T + K N LD + + D
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159
Query: 113 FGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV 162
FG+A+ D E GT Y++ E + +K + S G L E+
Sbjct: 160 FGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 27/170 (15%)
Query: 20 DSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNF--DDEHCIGKDGQGVVT 77
D + +A + L L +++ + ++ IDR E+C G D V+T
Sbjct: 40 DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT 99
Query: 78 K---LRYHLEK--LLRQEISFTTSSK--------------------NGLLDLEYEARAFD 112
K R +L++ +LR T + K N LD + + D
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159
Query: 113 FGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV 162
FG+A+ D+S GT Y++ E + +K + S G L E+
Sbjct: 160 FGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 27/170 (15%)
Query: 20 DSTTFRDAPMKALQGNKRLCGDIRGFPSCKVFNSRIDRVTNNF--DDEHCIGKDGQGVVT 77
D + +A + L L +++ + ++ IDR E+C G D V+T
Sbjct: 40 DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT 99
Query: 78 K---LRYHLEK--LLRQEISFTTSSK--------------------NGLLDLEYEARAFD 112
K R +L++ +LR T + K N LD + + D
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159
Query: 113 FGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLALEV 162
FG+A+ D+S GT Y++ E + +K + S G L E+
Sbjct: 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 40 GDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKN 99
GDIR ++N +D F + I Q +V+ L HL + R I +N
Sbjct: 270 GDIR----YHIYN--VDEDNPGFQEPRAIFYTAQ-IVSGLE-HLHQ--RNIIYRDLKPEN 319
Query: 100 GLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA 159
LLD + R D G+A K + AGT G++A EL + + G+
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL 379
Query: 160 LEVMKGKHP 168
E++ + P
Sbjct: 380 YEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 40 GDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKN 99
GDIR ++N +D F + I Q +V+ L HL + R I +N
Sbjct: 270 GDIR----YHIYN--VDEDNPGFQEPRAIFYTAQ-IVSGLE-HLHQ--RNIIYRDLKPEN 319
Query: 100 GLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA 159
LLD + R D G+A K + AGT G++A EL + + G+
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL 379
Query: 160 LEVMKGKHP 168
E++ + P
Sbjct: 380 YEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 40 GDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKN 99
GDIR ++N +D F + I Q +V+ L HL + R I +N
Sbjct: 270 GDIR----YHIYN--VDEDNPGFQEPRAIFYTAQ-IVSGLE-HLHQ--RNIIYRDLKPEN 319
Query: 100 GLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA 159
LLD + R D G+A K + AGT G++A EL + + G+
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL 379
Query: 160 LEVMKGKHP 168
E++ + P
Sbjct: 380 YEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 40 GDIRGFPSCKVFNSRIDRVTNNFDDEHCIGKDGQGVVTKLRYHLEKLLRQEISFTTSSKN 99
GDIR ++N +D F + I Q +V+ L HL + R I +N
Sbjct: 270 GDIR----YHIYN--VDEDNPGFQEPRAIFYTAQ-IVSGLE-HLHQ--RNIIYRDLKPEN 319
Query: 100 GLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGLLA 159
LLD + R D G+A K + AGT G++A EL + + G+
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTL 379
Query: 160 LEVMKGKHP 168
E++ + P
Sbjct: 380 YEMIAARGP 388
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRT-ELAGTYGYIALELTYTLKVA--KKCGMHS 154
+N LLD DFG++K F D + R + GT Y+A ++ K S
Sbjct: 188 ENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS 247
Query: 155 SGLLALEVMKGKHP 168
G+L E++ G P
Sbjct: 248 LGVLMYELLTGASP 261
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 89 QEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNR-TELAGTYGYIALELTYTLKVA 147
+ + +T+ N +L L DFG AK + S N TE T Y+A E+ K
Sbjct: 144 ENLLYTSKRPNAILKLT------DFGFAK--ETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 148 KKCGMHSSGLLALEVMKGKHP 168
K C M S G++ ++ G P
Sbjct: 196 KSCDMWSLGVIMYILLCGYPP 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 98 KNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAKKCGMHSSGL 157
+N LL E + DFG + SS R L GT Y+ E+ +K + S G+
Sbjct: 141 ENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 158 LALEVMKGKHP 168
L E + G P
Sbjct: 199 LCYEFLVGMPP 209
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 26.6 bits (57), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 89 QEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAK 148
+ + +T+ N +L L DFG AK +S T Y Y+A E+ K K
Sbjct: 151 ENLLYTSKRPNAILKLT------DFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDK 203
Query: 149 KCGMHSSGLLALEVMKGKHP 168
C M S G++ ++ G P
Sbjct: 204 SCDMWSLGVIMYILLCGYPP 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 26.6 bits (57), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 75 VVTKLRY-HLEKLLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTY 133
++T + Y H +L ++++ + N LL + DFG+A K+ L GT
Sbjct: 121 IITGMLYLHSHGILHRDLTLS----NLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 134 GYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
YI+ E+ + + S G + ++ G+ P
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 89 QEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAK 148
+ + +T+ N +L L DFG AK +S T Y Y+A E+ K K
Sbjct: 150 ENLLYTSKRPNAILKLT------DFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDK 202
Query: 149 KCGMHSSGLLALEVMKGKHP 168
C M S G++ ++ G P
Sbjct: 203 SCDMWSLGVIMYILLCGYPP 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 89 QEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTELAGTYGYIALELTYTLKVAK 148
+ + +T+ N +L L DFG AK +S T Y Y+A E+ K K
Sbjct: 152 ENLLYTSKRPNAILKLT------DFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDK 204
Query: 149 KCGMHSSGLLALEVMKGKHP 168
C M S G++ ++ G P
Sbjct: 205 SCDMWSLGVIMYILLCGYPP 224
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 72 GQGVVTKLRY-HLEK-LLRQEISFTTSSKNGLLDLEYEARAFDFGIAKFFKLDSSNRTEL 129
G +V+ L Y H EK ++ +++ +N +LD + + DFG+ K D +
Sbjct: 116 GAEIVSALDYLHSEKNVVYRDLKL----ENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 171
Query: 130 AGTYGYIALELTYTLKVAKKCGMHSSGLLALEVMKGKHP 168
GT Y+A E+ + G++ E+M G+ P
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,985,398
Number of Sequences: 62578
Number of extensions: 223026
Number of successful extensions: 566
Number of sequences better than 100.0: 174
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 448
Number of HSP's gapped (non-prelim): 183
length of query: 208
length of database: 14,973,337
effective HSP length: 94
effective length of query: 114
effective length of database: 9,091,005
effective search space: 1036374570
effective search space used: 1036374570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)