Query         039939
Match_columns 411
No_of_seqs    176 out of 2030
Neff          10.7
Searched_HMMs 46136
Date          Fri Mar 29 03:32:11 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039939.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039939hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02500 cytochrome P450 90B1  100.0 5.3E-73 1.2E-77  543.5  40.5  402    2-404    45-488 (490)
  2 PLN02774 brassinosteroid-6-oxi 100.0   2E-71 4.4E-76  528.5  39.4  394    2-404    38-462 (463)
  3 PLN03141 3-epi-6-deoxocathaste 100.0 2.1E-71 4.6E-76  527.2  39.2  402    2-407    14-451 (452)
  4 KOG0156 Cytochrome P450 CYP2 s 100.0 8.7E-71 1.9E-75  513.8  37.0  396    1-405    32-487 (489)
  5 PLN02196 abscisic acid 8'-hydr 100.0 1.3E-69 2.7E-74  515.8  38.8  394    2-405    42-462 (463)
  6 KOG0158 Cytochrome P450 CYP3/C 100.0 2.3E-69   5E-74  496.7  32.6  397    1-406    37-499 (499)
  7 PLN02987 Cytochrome P450, fami 100.0 2.3E-68 5.1E-73  505.6  40.0  403    2-406    37-469 (472)
  8 PLN02971 tryptophan N-hydroxyl 100.0 2.2E-67 4.8E-72  508.9  37.4  400    1-407    63-535 (543)
  9 PLN02290 cytokinin trans-hydro 100.0 2.9E-67 6.2E-72  507.4  37.2  400    1-406    48-515 (516)
 10 KOG0157 Cytochrome P450 CYP4/C 100.0 1.7E-68 3.6E-73  508.2  27.9  400    1-406    41-496 (497)
 11 PTZ00404 cytochrome P450; Prov 100.0 2.7E-67 5.9E-72  503.7  33.0  393    2-405    36-482 (482)
 12 PLN02302 ent-kaurenoic acid ox 100.0 2.8E-66 6.1E-71  498.9  39.7  402    2-407    49-489 (490)
 13 PLN00168 Cytochrome P450; Prov 100.0 2.3E-66   5E-71  500.4  37.8  400    2-406    42-517 (519)
 14 KOG0159 Cytochrome P450 CYP11/ 100.0 9.4E-67   2E-71  468.7  30.9  402    2-407    57-519 (519)
 15 PLN02169 fatty acid (omega-1)- 100.0 4.8E-66   1E-70  494.2  37.2  392    1-405    37-499 (500)
 16 PF00067 p450:  Cytochrome P450 100.0 4.8E-67   1E-71  501.7  29.2  395    1-402     5-463 (463)
 17 PLN02183 ferulate 5-hydroxylas 100.0 6.3E-66 1.4E-70  497.0  36.4  395    2-406    43-512 (516)
 18 PLN00110 flavonoid 3',5'-hydro 100.0 2.5E-65 5.4E-70  490.2  35.8  397    2-407    38-498 (504)
 19 PLN02738 carotene beta-ring hy 100.0 3.3E-65 7.1E-70  495.6  36.5  395    5-409   141-598 (633)
 20 PLN02687 flavonoid 3'-monooxyg 100.0 2.4E-65 5.1E-70  493.1  35.2  396    2-406    41-509 (517)
 21 PLN02655 ent-kaurene oxidase   100.0   1E-64 2.2E-69  482.9  38.4  398    1-407     5-465 (466)
 22 PLN02936 epsilon-ring hydroxyl 100.0 8.3E-65 1.8E-69  485.6  34.0  403    1-409    18-485 (489)
 23 PLN03234 cytochrome P450 83B1; 100.0 1.9E-64   4E-69  486.2  36.1  396    2-405    35-498 (499)
 24 PLN02394 trans-cinnamate 4-mon 100.0 2.1E-64 4.4E-69  486.4  35.8  397    2-406    37-502 (503)
 25 PLN03195 fatty acid omega-hydr 100.0 2.3E-64 5.1E-69  486.8  34.6  397    2-406    37-516 (516)
 26 PLN03018 homomethionine N-hydr 100.0 2.7E-63 5.9E-68  477.1  37.8  399    1-406    46-524 (534)
 27 PLN02966 cytochrome P450 83A1  100.0 2.1E-63 4.6E-68  478.2  36.5  377    2-384    36-471 (502)
 28 PLN03112 cytochrome P450 famil 100.0 3.3E-63 7.1E-68  479.0  35.3  398    2-408    39-510 (514)
 29 KOG0684 Cytochrome P450 [Secon 100.0 2.6E-62 5.7E-67  429.4  29.7  394    3-406    40-485 (486)
 30 PLN02426 cytochrome P450, fami 100.0   3E-61 6.4E-66  460.5  34.9  390    4-406    50-500 (502)
 31 PLN02648 allene oxide synthase 100.0 3.5E-57 7.7E-62  426.2  24.5  364    1-386    23-465 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 5.5E-53 1.2E-57  393.2  28.5  347   22-405    25-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  75.8     1.7 3.8E-05   27.8   1.4    9  330-338    44-52  (59)
 34 PF12554 MOZART1:  Mitotic-spin  62.4      24 0.00052   21.6   4.2   41  207-247     6-47  (48)
 35 PF05952 ComX:  Bacillus compet  46.1      22 0.00049   22.6   2.3   21  228-248     4-24  (57)
 36 KOG3506 40S ribosomal protein   44.0      10 0.00022   23.7   0.5   10  346-355    12-21  (56)
 37 PF12508 DUF3714:  Protein of u  41.1      22 0.00048   29.6   2.3   44  267-311    51-94  (200)
 38 PF13893 RRM_5:  RNA recognitio  34.0      55  0.0012   20.3   2.9   34   26-59      2-39  (56)
 39 PRK13713 conjugal transfer pro  30.5 2.3E+02  0.0051   21.2   7.5   70  168-238     4-92  (118)
 40 PF07849 DUF1641:  Protein of u  29.3      70  0.0015   18.9   2.5   19  227-245    13-31  (42)
 41 PHA03162 hypothetical protein;  29.0      34 0.00074   25.9   1.4   24  349-372     2-25  (135)
 42 PF09201 SRX:  SRX;  InterPro:   28.8      55  0.0012   25.2   2.4   22  354-375    19-40  (148)
 43 PRK06789 flagellar motor switc  28.4      64  0.0014   22.0   2.5   41  273-313    20-63  (74)
 44 PF11227 DUF3025:  Protein of u  27.7      36 0.00078   28.5   1.5   21  313-333   191-211 (212)
 45 PF13625 Helicase_C_3:  Helicas  25.2      62  0.0013   24.7   2.3   41   20-62     75-115 (129)
 46 PRK00400 hisE phosphoribosyl-A  25.0 2.9E+02  0.0062   20.4   6.7   76  170-249     5-90  (105)
 47 PF14483 Cut8_M:  Cut8 dimerisa  24.0      68  0.0015   18.5   1.7   21  225-245    14-35  (38)
 48 PF07886 BA14K:  BA14K-like pro  22.5      71  0.0015   17.5   1.5   16  341-356    16-31  (31)
 49 PF08285 DPM3:  Dolichol-phosph  22.1 1.9E+02  0.0042   20.6   4.1   34  218-251    48-81  (91)
 50 PLN03134 glycine-rich RNA-bind  21.8      80  0.0017   24.7   2.4   38   23-60     49-95  (144)
 51 COG1759 5-formaminoimidazole-4  21.5 1.8E+02  0.0039   26.2   4.6   68  272-369   276-351 (361)
 52 PF06522 B12D:  NADH-ubiquinone  21.1      78  0.0017   21.4   1.9   22  219-240    14-35  (73)
 53 PF14550 Peptidase_U35_2:  Puta  20.4      71  0.0015   24.2   1.7   22  290-311    71-92  (122)
 54 PF02663 FmdE:  FmdE, Molybdenu  20.0      92   0.002   23.8   2.4   22  353-374     5-26  (131)

No 1  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=5.3e-73  Score=543.55  Aligned_cols=402  Identities=45%  Similarity=0.849  Sum_probs=331.1

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcccc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKLS   81 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~~   81 (411)
                      ++|++||++.++++.....++.++.+++++||++|++++++.++|+++||+++++++.++...|+.+++......+|..+
T Consensus        45 ~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~~~g~~~  124 (490)
T PLN02500         45 GWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGILGKWS  124 (490)
T ss_pred             CCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHHHhCccc
Confidence            59999999877654333467788999999999999999999999999999999999998877776555554555566457


Q ss_pred             ccccCChhHHHHHHHHHhhhCCCCchhhhhHH--------------------------HHHHHHHHHHcCCCCChhHHHH
Q 039939           82 LLTVSGDLHKKLRNVAVSFIGASKSTPAFLHS--------------------------FTINLMVKHLLSIEPEEPIAFK  135 (411)
Q Consensus        82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~--------------------------~~~~~~~~~~fG~~~~~~~~~~  135 (411)
                      ++..+|+.|+++|+++++.|+..++...+.+.                          ++++++++++||.+.++.....
T Consensus       125 ~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~~~~~  204 (490)
T PLN02500        125 MLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMSMDPGEEETEQ  204 (490)
T ss_pred             ccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhCCCCCchHHHH
Confidence            88889999999999999999987765421111                          8999999999998765433444


Q ss_pred             HHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcc-c---CCCCchHHHHHccCCCCHHHHHHHH
Q 039939          136 ILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENM-R---AGEGDFLDVILKKRSLSEEETVSIV  211 (411)
Q Consensus       136 ~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~---~~~~d~l~~ll~~~~~~~~~~~~~~  211 (411)
                      +.+.+..+.......+.++|...+++..++.+.+.+++.++++++++... .   ....|+++.+++...++++ ++.++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~ls~~-~i~~~  283 (490)
T PLN02500        205 LKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHSNLSTE-QILDL  283 (490)
T ss_pred             HHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhccCCCHH-HHHHH
Confidence            44445444443333444566555667777888889999999987765321 1   1346899999987678988 99999


Q ss_pred             HHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccC--CCCCCCChhhhccChhHHHHHHHhhcCCCCCccc
Q 039939          212 LDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSK--QDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFV  288 (411)
Q Consensus       212 ~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~  288 (411)
                      +.++++||+|||+ +++|++++|++||++|+|+++|++++.+..  ..+..++++++.+||||+|||+|+||++|+++.+
T Consensus       284 ~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~  363 (490)
T PLN02500        284 ILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL  363 (490)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe
Confidence            9999999999999 999999999999999999999999987421  1124689999999999999999999999999998


Q ss_pred             ceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---------CCCCceeeccCCCCCCccHH
Q 039939          289 HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS---------VISKRVMPFGGGPRLCPGAE  359 (411)
Q Consensus       289 ~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~---------~~~~~~~~FG~G~r~C~G~~  359 (411)
                      +|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++.         ..+..++|||+|+|.|||++
T Consensus       364 ~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~  443 (490)
T PLN02500        364 HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSE  443 (490)
T ss_pred             eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHH
Confidence            999999999999999999999999999999999999999999999997541         13568999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCeEEecCCCCccccccccccCCceEEEEe
Q 039939          360 LAKVEISFFLHHLVLNYRWKTQADDYPIAYPYVEFRRGLLLEIER  404 (411)
Q Consensus       360 la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~  404 (411)
                      ||++|+++++++|+++|+|++.+++.....+.+.++++++|++.+
T Consensus       444 ~A~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~l~~~~~~  488 (490)
T PLN02500        444 LAKLEMAVFIHHLVLNFNWELAEADQAFAFPFVDFPKGLPIRVRR  488 (490)
T ss_pred             HHHHHHHHHHHHHHhccEEEEcCCCcceecccccCCCCceEEEEe
Confidence            999999999999999999999876544444455667899999876


No 2  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2e-71  Score=528.50  Aligned_cols=394  Identities=35%  Similarity=0.632  Sum_probs=330.3

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcccc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKLS   81 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~~   81 (411)
                      ++|++||++.+.+     ++..++++++++||++|++++++.++++++||+++++++.++...+..+.......++|..+
T Consensus        38 ~~P~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~~~  112 (463)
T PLN02774         38 GWPLFGETTEFLK-----QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDILGTCN  112 (463)
T ss_pred             CCCchhhHHHHHH-----hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHhCccc
Confidence            5899999998864     35678999999999999999999999999999999999987766665454444556677667


Q ss_pred             ccccCChhHHHHHHHHHhhhCCCCchhhhhH--------------------------HHHHHHHHHHHcCCCCChhHHHH
Q 039939           82 LLTVSGDLHKKLRNVAVSFIGASKSTPAFLH--------------------------SFTINLMVKHLLSIEPEEPIAFK  135 (411)
Q Consensus        82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~--------------------------~~~~~~~~~~~fG~~~~~~~~~~  135 (411)
                      ++..+|+.|+++|+++++.|+...++..+.+                          .++++++++++||..... ...+
T Consensus       113 ~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~  191 (463)
T PLN02774        113 IAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTLSKP-ISEE  191 (463)
T ss_pred             hhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCCChH-HHHH
Confidence            8888999999999999999988766531111                          178888889999976543 3344


Q ss_pred             HHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHH
Q 039939          136 ILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIV  211 (411)
Q Consensus       136 ~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~  211 (411)
                      +.+.+..+......+|.++|...+++..++++.+.+++.+.++++++..  ....|+++.+++..    .++++ ++..+
T Consensus       192 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~~~~~s~~-ei~~~  268 (463)
T PLN02774        192 FKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASG--ETHTDMLGYLMRKEGNRYKLTDE-EIIDQ  268 (463)
T ss_pred             HHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcC--CCcccHHHHHHhCccCCCCCCHH-HHHHH
Confidence            5555555544444566677766667777888999999999998887554  34579999998643    37888 99999


Q ss_pred             HHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccce
Q 039939          212 LDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHR  290 (411)
Q Consensus       212 ~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R  290 (411)
                      +.++++||+|||+ +++|++++|++||++|+|+++|++++.+..+.+..++++++.++|||+|||+|+||++|+++.+.|
T Consensus       269 ~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R  348 (463)
T PLN02774        269 IITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLR  348 (463)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCccc
Confidence            9999999999999 999999999999999999999999998643223568999999999999999999999999998889


Q ss_pred             eeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHH
Q 039939          291 EAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLH  370 (411)
Q Consensus       291 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~  370 (411)
                      ++++|++++||.||||+.|+++.+++||||++|+||++|+||||++++......++|||+|+|.|||+++|++|++++++
T Consensus       349 ~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la  428 (463)
T PLN02774        349 KTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEISTFLH  428 (463)
T ss_pred             ccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999976532234699999999999999999999999999


Q ss_pred             HHHHhCeEEecCCCCccccccccccCCceEEEEe
Q 039939          371 HLVLNYRWKTQADDYPIAYPYVEFRRGLLLEIER  404 (411)
Q Consensus       371 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~  404 (411)
                      .|+++|++++.++..+...+++.+++|++|++++
T Consensus       429 ~Ll~~f~~~~~~~~~~~~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        429 YFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHhceEEECCCCccccCCCCCCCCCceEEeee
Confidence            9999999999877665556677788999999974


No 3  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.1e-71  Score=527.19  Aligned_cols=402  Identities=37%  Similarity=0.713  Sum_probs=337.5

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcccc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKLS   81 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~~   81 (411)
                      ++|++||++.+.......+++.++.+++++||+||++++++.+++|++||+++++++.++...++.++......++|..+
T Consensus        14 ~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~~~~l~g~~~   93 (452)
T PLN03141         14 GWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKSLTELMGKSS   93 (452)
T ss_pred             CCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchhHHHHhCccc
Confidence            59999999998653323468899999999999999999999999999999999999998887777665555566777667


Q ss_pred             ccccCChhHHHHHHHHHhhhCCCCchhhhh-----------H---------------HHHHHHHHHHHcCCCCChhHHHH
Q 039939           82 LLTVSGDLHKKLRNVAVSFIGASKSTPAFL-----------H---------------SFTINLMVKHLLSIEPEEPIAFK  135 (411)
Q Consensus        82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~~~-----------~---------------~~~~~~~~~~~fG~~~~~~~~~~  135 (411)
                      ++..+|+.|+++|+++++.|+..++...+.           +               .+++++++.++||.+.+. ...+
T Consensus        94 ~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~G~~~~~-~~~~  172 (452)
T PLN03141         94 ILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALISLEPGE-EMEF  172 (452)
T ss_pred             ccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHcCCCchH-HHHH
Confidence            888999999999999999997765543111           0               189999999999987654 4455


Q ss_pred             HHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccC------CCCchHHHHHccC--CCCHHHH
Q 039939          136 ILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRA------GEGDFLDVILKKR--SLSEEET  207 (411)
Q Consensus       136 ~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~d~l~~ll~~~--~~~~~~~  207 (411)
                      +.+.+..+...+..+|.++|....++..++.+++.+++.++++++++.....      ...|+++.+++..  .++++ +
T Consensus       173 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~l~~~-~  251 (452)
T PLN03141        173 LKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGSDELTDD-L  251 (452)
T ss_pred             HHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCCCCCCHH-H
Confidence            5566666665555667667765566667788999999999998886543111      1468999998764  47888 9


Q ss_pred             HHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccC-CCCCCCChhhhccChhHHHHHHHhhcCCCCC
Q 039939          208 VSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSK-QDEEPLNWEDYQQMEFTNNVILEAMRCGNVV  285 (411)
Q Consensus       208 ~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  285 (411)
                      +..++..+++||+|||+ +++|++++|++||++|+++++|++++.+.. ..+..++.+++.++|||+|||+|++|++|++
T Consensus       252 i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~  331 (452)
T PLN03141        252 ISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNII  331 (452)
T ss_pred             HHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCc
Confidence            99999999999999999 999999999999999999999999886522 1235689999999999999999999999999


Q ss_pred             cccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHH
Q 039939          286 KFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEI  365 (411)
Q Consensus       286 ~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~  365 (411)
                      ++++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++. .+..++|||+|+|.|+|++||++|+
T Consensus       332 ~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-~~~~~~pFG~G~R~C~G~~lA~~el  410 (452)
T PLN03141        332 NGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM-NNSSFTPFGGGQRLCPGLDLARLEA  410 (452)
T ss_pred             CCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC-CCCCCCCCCCCCCCCChHHHHHHHH
Confidence            988999999999999999999999999999999999999999999999997642 4678999999999999999999999


Q ss_pred             HHHHHHHHHhCeEEecCCCCccccccccccCCceEEEEeCCC
Q 039939          366 SFFLHHLVLNYRWKTQADDYPIAYPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       366 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  407 (411)
                      ++++|.|+++|++++.++. ....+++.+++++.|.+.+|+.
T Consensus       411 ~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        411 SIFLHHLVTRFRWVAEEDT-IVNFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             HHHHHHHHhcCeeecCCCC-eeecccccCCCCceEEEEeCCC
Confidence            9999999999999987654 2334577888899999999965


No 4  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8.7e-71  Score=513.76  Aligned_cols=396  Identities=22%  Similarity=0.322  Sum_probs=318.7

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hhH-Hhhh-
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KPM-HGIL-   77 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~-~~~~-   77 (411)
                      +|||+|||++++...    .++..+.+|.++|||++++++|..++|||+|++++++++.+++..|++++. ... ..+. 
T Consensus        32 ~~lPiIGnl~~l~~~----~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~  107 (489)
T KOG0156|consen   32 PPLPIIGNLHQLGSL----PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSY  107 (489)
T ss_pred             CCCCccccHHHcCCC----chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcC
Confidence            479999999999652    478899999999999999999999999999999999999999999999886 223 3333 


Q ss_pred             cccccccc-CChhHHHHHHHHHhhh-CCCCchh--------------h--------------hhHHHHHHHHHHHHcCCC
Q 039939           78 GKLSLLTV-SGDLHKKLRNVAVSFI-GASKSTP--------------A--------------FLHSFTINLMVKHLLSIE  127 (411)
Q Consensus        78 g~~~l~~~-~g~~~~~~R~~~~~~~-~~~~l~~--------------~--------------~~~~~~~~~~~~~~fG~~  127 (411)
                      +..++.++ +|+.|+.+||+....+ +....+.              .              .+...+.+++++++||.+
T Consensus       108 ~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~fG~r  187 (489)
T KOG0156|consen  108 GGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLFGRR  187 (489)
T ss_pred             CCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHhCCc
Confidence            44677766 8999999999986544 4433222              0              111189999999999999


Q ss_pred             CCh---hHHHHHHHHHHHHHhhhc------ccC-c--cCCC--cccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchH
Q 039939          128 PEE---PIAFKILEDFQTFMKGFV------SLP-V--YIPG--THYANAVKARARLSRTVREIVRERQHENMRAGEGDFL  193 (411)
Q Consensus       128 ~~~---~~~~~~~~~~~~~~~~~~------~~p-~--~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l  193 (411)
                      +..   +...++.+.+.+....+.      .+| +  +++.  ...++......++..+++++|+++++....+...|++
T Consensus       188 f~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~~D~v  267 (489)
T KOG0156|consen  188 FEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEGRDFV  267 (489)
T ss_pred             cccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHH
Confidence            864   233334444444433222      244 2  3331  1333444455558899999999887652112238999


Q ss_pred             HHHHccCC------CCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhc
Q 039939          194 DVILKKRS------LSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQ  266 (411)
Q Consensus       194 ~~ll~~~~------~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  266 (411)
                      |.+++..+      ++++ ++...+..+++||+|||+ |+.|++.+|++||++|+|+++||+.+++.+   +.++.+|+.
T Consensus       268 D~lL~~~~~~~~~~~t~~-~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~---r~v~e~D~~  343 (489)
T KOG0156|consen  268 DALLKLMKEEKAEGLTDD-HLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG---RLVSESDLP  343 (489)
T ss_pred             HHHHHhhcccccCCCCHH-HHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CCCChhhhc
Confidence            99997652      7888 999999999999999999 999999999999999999999999999865   349999999


Q ss_pred             cChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCCCC
Q 039939          267 QMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVISK  343 (411)
Q Consensus       267 ~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~~~  343 (411)
                      ++|||+|+|+|++|++|++|. ++|.+++|+.++||.|||||.|+++.|++||||++|+||++|+||||++++  .....
T Consensus       344 ~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~~~~~  423 (489)
T KOG0156|consen  344 KLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGKGLDF  423 (489)
T ss_pred             cCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCccccCCce
Confidence            999999999999999999996 689999999999999999999999999999999999999999999999973  34788


Q ss_pred             ceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc---cccccccCCceEEEEeC
Q 039939          344 RVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA---YPYVEFRRGLLLEIERT  405 (411)
Q Consensus       344 ~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~v~~~~r  405 (411)
                      .++|||.|+|.|||..+|++++.++++.|+++|+|++.++ .++.   ..++..+.++.+...+|
T Consensus       424 ~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  424 KLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEAGLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             EecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCcccccceecCCcceeeeecC
Confidence            9999999999999999999999999999999999999866 2111   13345555666665555


No 5  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.3e-69  Score=515.80  Aligned_cols=394  Identities=30%  Similarity=0.612  Sum_probs=328.8

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcccc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKLS   81 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~~   81 (411)
                      ++|++||++++.+    ++++.++.+++++||++|++++++.++|+++||+++++++.++...++..+.......+|..+
T Consensus        42 ~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~~~~g~~~  117 (463)
T PLN02196         42 GWPYVGETFQLYS----QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKERMLGKQA  117 (463)
T ss_pred             CCCccchHHHHHh----cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHHHHcCccc
Confidence            5899999988754    367889999999999999999999999999999999999988776665444433444566568


Q ss_pred             ccccCChhHHHHHHHHHhhhCCCCchhh------------------------hhHHHHHHHHHHHHcCCCCChhHHHHHH
Q 039939           82 LLTVSGDLHKKLRNVAVSFIGASKSTPA------------------------FLHSFTINLMVKHLLSIEPEEPIAFKIL  137 (411)
Q Consensus        82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~------------------------~~~~~~~~~~~~~~fG~~~~~~~~~~~~  137 (411)
                      ++..+|+.|+++|+++++.|+.+++...                        .+..+++++++.++||.+... ....+.
T Consensus       118 l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~fG~~~~~-~~~~~~  196 (463)
T PLN02196        118 IFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWEGTQINTYQEMKTYTFNVALLSIFGKDEVL-YREDLK  196 (463)
T ss_pred             ccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCeEEeHHHHHHHHHHHHHHHHcCCCCch-HHHHHH
Confidence            8889999999999999999998776641                        011189999999999987542 222333


Q ss_pred             HHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-CCCHHHHHHHHHHHHH
Q 039939          138 EDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-SLSEEETVSIVLDIML  216 (411)
Q Consensus       138 ~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~~~~~  216 (411)
                      +.+..+...+..+|+.+|....++..++.+.+.+++.++++++++..  ....|+++.++++. +++++ ++.+++..++
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~--~~~~d~l~~ll~~~~~l~~~-ei~~~~~~~~  273 (463)
T PLN02196        197 RCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNG--SSHNDLLGSFMGDKEGLTDE-QIADNIIGVI  273 (463)
T ss_pred             HHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC--CCcccHHHHHHhcCCCCCHH-HHHHHHHHHH
Confidence            33333333333456666665567778888999999999998876553  34578999998653 58888 9999999999


Q ss_pred             hcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccc
Q 039939          217 GGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRD  295 (411)
Q Consensus       217 ~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d  295 (411)
                      +||+|||+ +++|++++|++||++|+|+++|++++.+..+.+..+++++++++|||+|+|+|+||++|+++++.|.+.+|
T Consensus       274 ~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d  353 (463)
T PLN02196        274 FAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVED  353 (463)
T ss_pred             HhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccc
Confidence            99999999 99999999999999999999999998875433467899999999999999999999999999988999999


Q ss_pred             cccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHh
Q 039939          296 VKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLN  375 (411)
Q Consensus       296 ~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~  375 (411)
                      ++++||.|||||.|+++.+++||||++|+||++|+||||+++.  .+..++|||.|+|.|+|+++|++|++++++.|+++
T Consensus       354 ~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~--~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~  431 (463)
T PLN02196        354 VEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP--KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTK  431 (463)
T ss_pred             cccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC--CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999754  56789999999999999999999999999999999


Q ss_pred             CeEEecCCCC-ccccccccccCCceEEEEeC
Q 039939          376 YRWKTQADDY-PIAYPYVEFRRGLLLEIERT  405 (411)
Q Consensus       376 f~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r  405 (411)
                      |++++.+++. .....+..|++++.|+++..
T Consensus       432 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        432 YRWSIVGTSNGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             cEEEEcCCCCceEEcccccCCCCceEEEecC
Confidence            9999986643 33344567888999998754


No 6  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.3e-69  Score=496.74  Aligned_cols=397  Identities=22%  Similarity=0.310  Sum_probs=312.4

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccC--Chh-HHhhh
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY--PKP-MHGIL   77 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~--~~~-~~~~~   77 (411)
                      +|+|++||+..+.+....   ..+..+.+.+|||++.++.+.++.++|+|||.+++|+.++...|.++.  ... -..-+
T Consensus        37 ~p~p~~Gn~~~~~~~~~~---~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~~l  113 (499)
T KOG0158|consen   37 KPLPFLGNLPGMLKRERP---GDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPEDPL  113 (499)
T ss_pred             CCCCcEecHHHHHhccCc---HHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCCcc
Confidence            468999999999864322   234444455559999999999999999999999999998888888732  111 11123


Q ss_pred             ccccccccCChhHHHHHHHHHhhhCCCCchhh--hh---------------------------HHHHHHHHHHHHcCCCC
Q 039939           78 GKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA--FL---------------------------HSFTINLMVKHLLSIEP  128 (411)
Q Consensus        78 g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~---------------------------~~~~~~~~~~~~fG~~~  128 (411)
                      +..+++..+|+.||++|..++|.||..+++.-  .+                           ..+++|+|+++.||.+.
T Consensus       114 ~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~  193 (499)
T KOG0158|consen  114 SALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDA  193 (499)
T ss_pred             cccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccch
Confidence            34678899999999999999999999988860  00                           01999999999999987


Q ss_pred             Chh--HHHHHHHHHHHHHhh-----------hcccCccCCC-cccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHH
Q 039939          129 EEP--IAFKILEDFQTFMKG-----------FVSLPVYIPG-THYANAVKARARLSRTVREIVRERQHENMRAGEGDFLD  194 (411)
Q Consensus       129 ~~~--~~~~~~~~~~~~~~~-----------~~~~p~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~  194 (411)
                      ++-  ....+..........           ...+|..... ............+.+.+.+.++.|..++  ...+|+++
T Consensus       194 ~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~--~~r~Dfi~  271 (499)
T KOG0158|consen  194 NSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKEN--IERNDFID  271 (499)
T ss_pred             hhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcC--CCCchHHH
Confidence            531  111122111111111           1111111100 0111123445566666777777764443  56889999


Q ss_pred             HHHccC-----------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCCh
Q 039939          195 VILKKR-----------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNW  262 (411)
Q Consensus       195 ~ll~~~-----------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  262 (411)
                      .+++..           .+|.+ +++.+++.+++||.|||| ++++++|+|++||++|+|||+||+++....   ..+|+
T Consensus       272 lll~~~~~~~~~~~~~~~lt~d-ei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~---~~lty  347 (499)
T KOG0158|consen  272 LLLDARASDFAKSKSHKALTDD-EIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEK---EGLTY  347 (499)
T ss_pred             HHHHhhcccccccccccccCHH-HHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccc---CCCCH
Confidence            999765           38889 999999999999999999 999999999999999999999999997654   23999


Q ss_pred             hhhccChhHHHHHHHhhcCCCCCcccceeeccccccC-CEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--c
Q 039939          263 EDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFK-EYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--S  339 (411)
Q Consensus       263 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~  339 (411)
                      |.+.+|+||++||+||||+||+++.+.|.+++|.++. ++.||||+.|+++.+++||||++||||++|+||||+++.  .
T Consensus       348 d~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~  427 (499)
T KOG0158|consen  348 DSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNKS  427 (499)
T ss_pred             HHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCcccc
Confidence            9999999999999999999999999999999999999 999999999999999999999999999999999999877  4


Q ss_pred             CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc-----cccccccCCceEEEEeCC
Q 039939          340 VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA-----YPYVEFRRGLLLEIERTN  406 (411)
Q Consensus       340 ~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~r~  406 (411)
                      ..+..|+|||.|||+|+|++||.+|+|+.|+.||++|+++..+...+..     ..++.+++|+.+++.+|+
T Consensus       428 ~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  428 RHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            5788999999999999999999999999999999999999987332221     234677788999999985


No 7  
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.3e-68  Score=505.59  Aligned_cols=403  Identities=36%  Similarity=0.668  Sum_probs=328.1

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcccc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKLS   81 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~~   81 (411)
                      ++|++||++++.......+++.++.+++++||+++++++++.++++++||+++++++.++...|..++......++|+++
T Consensus        37 ~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~lg~~~  116 (472)
T PLN02987         37 GLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHS  116 (472)
T ss_pred             CCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHhCccc
Confidence            58999999988542222468889999999999999999999999999999999999998877776655555567777678


Q ss_pred             ccccCChhHHHHHHHHHhhhCCCCchhh-------h-----------------hHHHHHHHHHHHHcCCCCChhHHHHHH
Q 039939           82 LLTVSGDLHKKLRNVAVSFIGASKSTPA-------F-----------------LHSFTINLMVKHLLSIEPEEPIAFKIL  137 (411)
Q Consensus        82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~-------~-----------------~~~~~~~~~~~~~fG~~~~~~~~~~~~  137 (411)
                      +++.+|+.|+++|+++.+.++.+.+...       +                 +..++++++++++||.+.++ ....+.
T Consensus       117 l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~t~~vi~~~~fg~~~~~-~~~~~~  195 (472)
T PLN02987        117 LLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWSSRVLLMEEAKKITFELTVKQLMSFDPGE-WTESLR  195 (472)
T ss_pred             ccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhccceehHHHHHHHHHHHHHHHHcCCCChH-HHHHHH
Confidence            9999999999999998753333222221       1                 11178899999999987653 223333


Q ss_pred             HHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhccc--CCCCchHHHHHccC-CCCHHHHHHHHHHH
Q 039939          138 EDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMR--AGEGDFLDVILKKR-SLSEEETVSIVLDI  214 (411)
Q Consensus       138 ~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~d~l~~ll~~~-~~~~~~~~~~~~~~  214 (411)
                      +.+......+..+++.+....+++..++++++.+++.++++++++....  ....|+++.+++.. +++++ ++..++..
T Consensus       196 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~-ei~~~~~~  274 (472)
T PLN02987        196 KEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASDDGFSDE-EIVDFLVA  274 (472)
T ss_pred             HHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcCCCCCHH-HHHHHHHH
Confidence            3333333323222222222345677888999999999999988764311  23579999999754 58888 99999999


Q ss_pred             HHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeec
Q 039939          215 MLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAI  293 (411)
Q Consensus       215 ~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~  293 (411)
                      +++||+|||+ +++|++++|++||++|+++++|++++.+..+.+..++++++.++|||+|+++|+||++|+++.++|++.
T Consensus       275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~  354 (472)
T PLN02987        275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAM  354 (472)
T ss_pred             HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCC
Confidence            9999999999 999999999999999999999999987643334568999999999999999999999999998889999


Q ss_pred             cccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--CCCCceeeccCCCCCCccHHHHHHHHHHHHHH
Q 039939          294 RDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--VISKRVMPFGGGPRLCPGAELAKVEISFFLHH  371 (411)
Q Consensus       294 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~  371 (411)
                      +|++++||.||||+.|+++.+.+||||++|+||++|+||||++++.  .....++|||+|+|.|||++||++|++++++.
T Consensus       355 ~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~  434 (472)
T PLN02987        355 TDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHR  434 (472)
T ss_pred             CCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999997652  23468999999999999999999999999999


Q ss_pred             HHHhCeEEecCCCCccccccccccCCceEEEEeCC
Q 039939          372 LVLNYRWKTQADDYPIAYPYVEFRRGLLLEIERTN  406 (411)
Q Consensus       372 ll~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  406 (411)
                      |+++|++++.++......+++.+.+++.+++++|+
T Consensus       435 ll~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        435 LVTRFSWVPAEQDKLVFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             HHhceEEEECCCCceeecccccCCCCceEEEEecc
Confidence            99999999987776555567788889999999985


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.2e-67  Score=508.90  Aligned_cols=400  Identities=19%  Similarity=0.269  Sum_probs=308.4

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcc
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGK   79 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~   79 (411)
                      +|+|++||++++.+..   ..+.++.++.++|| +++++++|+.++|+++||++++++|.++...|.+++.......+|.
T Consensus        63 ~~lPiiGnl~~l~~~~---~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~  139 (543)
T PLN02971         63 TGFPIVGMIPAMLKNR---PVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN  139 (543)
T ss_pred             CCCCcccchHHhccCC---cHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccC
Confidence            3699999999886421   23567899999999 8999999999999999999999999988777777654444444553


Q ss_pred             c---cccccCChhHHHHHHHHHhhhCCCC-chh-------------hhh----------------HHHHHHHHHHHHcCC
Q 039939           80 L---SLLTVSGDLHKKLRNVAVSFIGASK-STP-------------AFL----------------HSFTINLMVKHLLSI  126 (411)
Q Consensus        80 ~---~l~~~~g~~~~~~R~~~~~~~~~~~-l~~-------------~~~----------------~~~~~~~~~~~~fG~  126 (411)
                      .   +++..+|+.|+++|+++++.+.... ...             ..+                ..++++++++++||.
T Consensus       140 ~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~  219 (543)
T PLN02971        140 GYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGT  219 (543)
T ss_pred             CCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhCC
Confidence            2   3677889999999999976554322 111             001                118999999999998


Q ss_pred             CCCh-------hHHHHHHHHHHHHHhhh-----cccCccCCC-------cccHHHHHHHHHHHHHHHHHHHHHHhhcc--
Q 039939          127 EPEE-------PIAFKILEDFQTFMKGF-----VSLPVYIPG-------THYANAVKARARLSRTVREIVRERQHENM--  185 (411)
Q Consensus       127 ~~~~-------~~~~~~~~~~~~~~~~~-----~~~p~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  185 (411)
                      +...       ....+..+.+..+....     ..++.++|.       ...+...+..+.+.+++.++++++++...  
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  299 (543)
T PLN02971        220 RTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREG  299 (543)
T ss_pred             cccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            7521       01112222222222111     011112221       11223444566677888888887754311  


Q ss_pred             -cCCCCchHHHHHccC------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCC
Q 039939          186 -RAGEGDFLDVILKKR------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDE  257 (411)
Q Consensus       186 -~~~~~d~l~~ll~~~------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  257 (411)
                       .....|+++.+++..      .++++ ++..++.++++||+|||+ +++|++++|+.||++|+|+++||+++++.+   
T Consensus       300 ~~~~~~d~l~~ll~~~~~~~~~~ls~~-~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~---  375 (543)
T PLN02971        300 KRTQIEDFLDIFISIKDEAGQPLLTAD-EIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKE---  375 (543)
T ss_pred             CCCCCcCHHHHHHhhhcccCCCCCCHH-HHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---
Confidence             112469999999632      27888 999999999999999999 999999999999999999999999998753   


Q ss_pred             CCCChhhhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCC
Q 039939          258 EPLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTD  336 (411)
Q Consensus       258 ~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~  336 (411)
                      ..++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||++
T Consensus       376 ~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~  455 (543)
T PLN02971        376 RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLN  455 (543)
T ss_pred             CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCC
Confidence            578999999999999999999999999997 7899999999999999999999999999999999999999999999997


Q ss_pred             Ccc-----CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-ccc---cccccccCCceEEEEeCCC
Q 039939          337 KAS-----VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-PIA---YPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       337 ~~~-----~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~---~~~~~~~~~~~v~~~~r~~  407 (411)
                      +..     ..+..++|||+|+|.|+|++||++|+++++++||++|+|++.++.. ...   ...+..++++.+.+++|..
T Consensus       456 ~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (543)
T PLN02971        456 ECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKPLVMVGELRLS  535 (543)
T ss_pred             CCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcCcccccccceeeeeecCC
Confidence            541     2356899999999999999999999999999999999999876442 221   2245567799999999943


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.9e-67  Score=507.43  Aligned_cols=400  Identities=19%  Similarity=0.281  Sum_probs=311.6

Q ss_pred             CCCcccchhhhhccc--C------------CCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCcccc
Q 039939            1 MGWPICGETLAFLKP--H------------KSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQ   66 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~--~------------~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~   66 (411)
                      +|+|++||++++...  .            ..+.+...+.+|+++||++|++++++.++|+++||+++++++.++...+.
T Consensus        48 ~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~~~~~~  127 (516)
T PLN02290         48 KPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKYNTVTG  127 (516)
T ss_pred             CCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcCCCCCC
Confidence            369999999887531  0            01223345788999999999999999999999999999999987643332


Q ss_pred             ccCCh--hHHhhhccccccccCChhHHHHHHHHHhhhCCCCchhh----------hh--------------------HHH
Q 039939           67 ASYPK--PMHGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FL--------------------HSF  114 (411)
Q Consensus        67 ~~~~~--~~~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~--------------------~~~  114 (411)
                      ..+..  .....+| .++++.+|+.|+++|+++++.|+.++++..          ++                    ..+
T Consensus       128 r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~  206 (516)
T PLN02290        128 KSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEIGEYMTRL  206 (516)
T ss_pred             CcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHH
Confidence            22211  1233455 688889999999999999999988765540          00                    018


Q ss_pred             HHHHHHHHHcCCCCCh-hHHHHHHHHHHHHHhhh---cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhccc--
Q 039939          115 TINLMVKHLLSIEPEE-PIAFKILEDFQTFMKGF---VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMR--  186 (411)
Q Consensus       115 ~~~~~~~~~fG~~~~~-~~~~~~~~~~~~~~~~~---~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--  186 (411)
                      ++++++.++||.+.+. +........+.......   ..+|.  ++|....++..+..+.+.+++.+.++++++....  
T Consensus       207 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  286 (516)
T PLN02290        207 TADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSRRDCVEIGR  286 (516)
T ss_pred             HHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999988653 11222222222221111   11232  3443333445556678888888888877653211  


Q ss_pred             --CCCCchHHHHHccC--------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCC
Q 039939          187 --AGEGDFLDVILKKR--------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQ  255 (411)
Q Consensus       187 --~~~~d~l~~ll~~~--------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  255 (411)
                        ....|+++.+++..        .++.+ ++.+++.++++||+|||+ +++|++++|++||++|+|+++||+++++.  
T Consensus       287 ~~~~~~d~l~~ll~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~--  363 (516)
T PLN02290        287 SSSYGDDLLGMLLNEMEKKRSNGFNLNLQ-LIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG--  363 (516)
T ss_pred             CCCCCCCHHHHHHHhccccCCCCCCCCHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC--
Confidence              23468999998642        26677 899999999999999999 99999999999999999999999999864  


Q ss_pred             CCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCC
Q 039939          256 DEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRW  334 (411)
Q Consensus       256 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rf  334 (411)
                        ..++++++++||||+|||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++| +||++|+||||
T Consensus       364 --~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRf  441 (516)
T PLN02290        364 --ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRF  441 (516)
T ss_pred             --CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCcccc
Confidence              368999999999999999999999999999999999999999999999999999999999999999 89999999999


Q ss_pred             CCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC--ccccccccccCCceEEEEeCC
Q 039939          335 TDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY--PIAYPYVEFRRGLLLEIERTN  406 (411)
Q Consensus       335 l~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~  406 (411)
                      +++.......++|||.|+|.|||++||++|++++++.|+++|++++.++..  .....++.++++++|++++|+
T Consensus       442 l~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        442 AGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             CCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCeEEEEeCC
Confidence            965433456799999999999999999999999999999999999876532  222345677889999999986


No 10 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.7e-68  Score=508.21  Aligned_cols=400  Identities=30%  Similarity=0.474  Sum_probs=324.5

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCc--cccccCChhHHhhhc
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEK--YFQASYPKPMHGILG   78 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~--~~~~~~~~~~~~~~g   78 (411)
                      +++|++|+++++.+..  .++..+..++..+||++|+.++++.++++++||+.+++|+.++..  .+...+++.+.+.+|
T Consensus        41 ~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~lG  118 (497)
T KOG0157|consen   41 PGWPLIGNLLEFLKPL--EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWLG  118 (497)
T ss_pred             CCCCcccchHHhhcch--hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHhc
Confidence            3699999999998765  578889999999999999999999999999999999999964333  334456667889999


Q ss_pred             cccccccCChhHHHHHHHHHhhhCCCCchhhh----------------------------hHHHHHHHHHHHHcCCCC--
Q 039939           79 KLSLLTVSGDLHKKLRNVAVSFIGASKSTPAF----------------------------LHSFTINLMVKHLLSIEP--  128 (411)
Q Consensus        79 ~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~~----------------------------~~~~~~~~~~~~~fG~~~--  128 (411)
                      . |+++++|+.|.++|+++.++|+.+.++..+                            +..+++++++++++|...  
T Consensus       119 ~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~G~~~~~  197 (497)
T KOG0157|consen  119 D-GLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAMGPESLD  197 (497)
T ss_pred             C-ccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhcCCcccc
Confidence            5 999999999999999999999977666521                            111999999999999322  


Q ss_pred             -ChhHHHHHHHHHHHHHh---hhcccCc---cCCC-cccHHHHHHHHHHHHHHHHHHHHHHhhccc------CCCCchHH
Q 039939          129 -EEPIAFKILEDFQTFMK---GFVSLPV---YIPG-THYANAVKARARLSRTVREIVRERQHENMR------AGEGDFLD  194 (411)
Q Consensus       129 -~~~~~~~~~~~~~~~~~---~~~~~p~---~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~l~  194 (411)
                       ......++.+++.....   .-...|.   ++.. ...++..++.+.+.+.+.++|++|++....      ....|+++
T Consensus       198 ~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~  277 (497)
T KOG0157|consen  198 AEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLD  277 (497)
T ss_pred             ccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHH
Confidence             12233345555554322   2222331   1111 245667778999999999999988865211      33567888


Q ss_pred             HHHc-cC-CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhH
Q 039939          195 VILK-KR-SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFT  271 (411)
Q Consensus       195 ~ll~-~~-~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l  271 (411)
                      .+.. .. .++++ ++.+++.++++||+|||+ +++|+++.|+.||++|+|+++|+.++++.+...  .+.....+|+||
T Consensus       278 ~~~~~~~~~l~~~-~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~--~~~~~~~~m~yl  354 (497)
T KOG0157|consen  278 TLLLEEDKPLTDE-DIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK--WEVEKLDQMKYL  354 (497)
T ss_pred             HHHHhccCCCCHH-HHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC--CChhhhhhhHHH
Confidence            5333 22 58888 999999999999999999 999999999999999999999999998754222  222233369999


Q ss_pred             HHHHHHhhcCCCCCcccceeecccccc-CCEEeCCCcEEecchhhhccCCCCCC-CCCCCCCCCCCCCc---cCCCCcee
Q 039939          272 NNVILEAMRCGNVVKFVHREAIRDVKF-KEYLIPSGWKVLPVFTAAHFDLNLHE-NPSEFNPSRWTDKA---SVISKRVM  346 (411)
Q Consensus       272 ~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~-dp~~F~P~Rfl~~~---~~~~~~~~  346 (411)
                      ++||+|+||||||+|.+.|.+.+|+++ +||.||||+.|+++++++|||+.+|+ ||++|+||||+++.   ..++.+|+
T Consensus       355 ~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fi  434 (497)
T KOG0157|consen  355 EMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFI  434 (497)
T ss_pred             HHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCcccc
Confidence            999999999999999999999999999 58999999999999999999999995 99999999999754   23578999


Q ss_pred             eccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCC--CccccccccccCCceEEEEeCC
Q 039939          347 PFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADD--YPIAYPYVEFRRGLLLEIERTN  406 (411)
Q Consensus       347 ~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~  406 (411)
                      |||+|+|.|+|+.||++|++++++.++++|+|++..+.  .+....++.++.|++|++++|.
T Consensus       435 pFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  435 PFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence            99999999999999999999999999999999988764  4555667899999999999986


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.7e-67  Score=503.72  Aligned_cols=393  Identities=19%  Similarity=0.274  Sum_probs=306.2

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh--HHhhhcc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--MHGILGK   79 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--~~~~~g~   79 (411)
                      ++|++||++++.+     +++.++.+++++||++|++++++.++|+++||+++++++.++...|..+....  ....+| 
T Consensus        36 ~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~-  109 (482)
T PTZ00404         36 PIPILGNLHQLGN-----LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTFY-  109 (482)
T ss_pred             CCCeeccHhhhcc-----cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeeccC-
Confidence            5899999998853     46789999999999999999999999999999999999987654554332211  112233 


Q ss_pred             ccccccCChhHHHHHHHHHhhhCCCCchhh----------hhH-------------------HHHHHHHHHHHcCCCCCh
Q 039939           80 LSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH-------------------SFTINLMVKHLLSIEPEE  130 (411)
Q Consensus        80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~-------------------~~~~~~~~~~~fG~~~~~  130 (411)
                      .++++.+|+.|+++|+++++.|+.+++...          +++                   .+++++++.++||.+.+.
T Consensus       110 ~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~  189 (482)
T PTZ00404        110 HGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNEDISF  189 (482)
T ss_pred             CceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhcccccc
Confidence            688889999999999999999988776651          011                   099999999999987642


Q ss_pred             h------HHHHHHHHHHHHHhhhcc------cCccCCC--cccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHH
Q 039939          131 P------IAFKILEDFQTFMKGFVS------LPVYIPG--THYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVI  196 (411)
Q Consensus       131 ~------~~~~~~~~~~~~~~~~~~------~p~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~l  196 (411)
                      .      ....+.+.+..++.....      ++...+.  .......++.+.+.+++.+.++++++........|+++.+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~dll~~l  269 (482)
T PTZ00404        190 DEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDLL  269 (482)
T ss_pred             ccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccHHHHH
Confidence            1      123444444444332111      1111110  0112223455666677777776655432223357899999


Q ss_pred             HccC-CCCHH--HHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHH
Q 039939          197 LKKR-SLSEE--ETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTN  272 (411)
Q Consensus       197 l~~~-~~~~~--~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~  272 (411)
                      ++.. +.+++  +++.+++..+++||+|||+ +++|++++|++||++|+|+++|++++++.+   ..++++++++||||+
T Consensus       270 l~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~---~~~~~~~l~~L~yl~  346 (482)
T PTZ00404        270 IKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR---NKVLLSDRQSTPYTV  346 (482)
T ss_pred             HHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC---CCCCccccccChHHH
Confidence            9763 23333  1488899999999999999 999999999999999999999999998753   467999999999999


Q ss_pred             HHHHHhhcCCCCCcc-cceeecccccc-CCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccC
Q 039939          273 NVILEAMRCGNVVKF-VHREAIRDVKF-KEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGG  350 (411)
Q Consensus       273 a~i~E~lRl~p~~~~-~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~  350 (411)
                      |||+|+||++|+++. ++|++.+|+++ +||.|||||.|+++.+++||||++||||++|+||||++..  ....++|||+
T Consensus       347 avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~--~~~~~~pFg~  424 (482)
T PTZ00404        347 AIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD--SNDAFMPFSI  424 (482)
T ss_pred             HHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC--CCCceeccCC
Confidence            999999999999996 68999999999 9999999999999999999999999999999999999764  5678999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc---ccccccccCCceEEEEeC
Q 039939          351 GPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI---AYPYVEFRRGLLLEIERT  405 (411)
Q Consensus       351 G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~v~~~~r  405 (411)
                      |+|.|||++||++|++++++.|+++|++++.+++...   .......++++.|++++|
T Consensus       425 G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  482 (482)
T PTZ00404        425 GPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLKPNKFKVLLEKR  482 (482)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeecCCCceeeeecC
Confidence            9999999999999999999999999999987554321   122223378899999887


No 12 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.8e-66  Score=498.86  Aligned_cols=402  Identities=31%  Similarity=0.565  Sum_probs=324.0

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhcc--ccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQ--VFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGK   79 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~--v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~   79 (411)
                      ++|++||++++......++++.++.+++++||+  +|++++++.++++++||+++++++.++ ..|.++++......+|.
T Consensus        49 ~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~~~~~g~  127 (490)
T PLN02302         49 GWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPESTVELIGR  127 (490)
T ss_pred             CCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhHHHHhcc
Confidence            589999999987543345788899999999997  789999999999999999999999866 44555544443345665


Q ss_pred             ccccccCChhHHHHHHHHHhhhC-CCCchhh----------hh---------------HHHHHHHHHHHHcCCCCChhHH
Q 039939           80 LSLLTVSGDLHKKLRNVAVSFIG-ASKSTPA----------FL---------------HSFTINLMVKHLLSIEPEEPIA  133 (411)
Q Consensus        80 ~~l~~~~g~~~~~~R~~~~~~~~-~~~l~~~----------~~---------------~~~~~~~~~~~~fG~~~~~~~~  133 (411)
                      .++...+|+.|+++|+++++.|+ .++++..          ++               ..+++++++.++||.+.+. ..
T Consensus       128 ~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~~~~~G~~~~~-~~  206 (490)
T PLN02302        128 KSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIMYIFLSSESEL-VM  206 (490)
T ss_pred             ccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHHHHHcCCCChH-HH
Confidence            56677899999999999999995 4444430          01               1188999999999988654 23


Q ss_pred             HHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhccc---CCCCchHHHHHccC-----CCCHH
Q 039939          134 FKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMR---AGEGDFLDVILKKR-----SLSEE  205 (411)
Q Consensus       134 ~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~d~l~~ll~~~-----~~~~~  205 (411)
                      ..+.+.+..+...+..++..+|...+++..++.+.+.+++.+.++++++....   ....|+++.+++..     .++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~  286 (490)
T PLN02302        207 EALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDENGRKLDDE  286 (490)
T ss_pred             HHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCCCCCCHH
Confidence            33333333333333333444555555666677788889999988887654211   23578999998642     37777


Q ss_pred             HHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCC-CCCChhhhccChhHHHHHHHhhcCCC
Q 039939          206 ETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDE-EPLNWEDYQQMEFTNNVILEAMRCGN  283 (411)
Q Consensus       206 ~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p  283 (411)
                       ++..++..+++||+|||+ +++|++++|++||++|+|+++|++++++....+ ..+++++++++|||+|+|+|+||++|
T Consensus       287 -~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p  365 (490)
T PLN02302        287 -EIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLIN  365 (490)
T ss_pred             -HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCC
Confidence             999999999999999999 999999999999999999999999988643221 23799999999999999999999999


Q ss_pred             CCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHH
Q 039939          284 VVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKV  363 (411)
Q Consensus       284 ~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~  363 (411)
                      +++...|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.. ..+..++|||+|+|.|+|++||.+
T Consensus       366 ~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~-~~~~~~~pFG~G~r~C~G~~lA~~  444 (490)
T PLN02302        366 ISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT-PKAGTFLPFGLGSRLCPGNDLAKL  444 (490)
T ss_pred             CcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC-CCCCCccCCCCCCcCCCcHHHHHH
Confidence            9999889999999999999999999999999999999999999999999999754 355789999999999999999999


Q ss_pred             HHHHHHHHHHHhCeEEecCCC-CccccccccccCCceEEEEeCCC
Q 039939          364 EISFFLHHLVLNYRWKTQADD-YPIAYPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       364 ~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~v~~~~r~~  407 (411)
                      |++++++.|+++|++++.++. .....+.+.+++++.+++++|..
T Consensus       445 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        445 EISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             HHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEeccC
Confidence            999999999999999987553 22334557888899999999864


No 13 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.3e-66  Score=500.38  Aligned_cols=400  Identities=21%  Similarity=0.309  Sum_probs=311.6

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhccc-
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKL-   80 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~-   80 (411)
                      ++|++||++.+...  ..+++.++.+++++||++|++++++.++|+++||+++++++.++...|+.++......++|.+ 
T Consensus        42 ~~pl~G~l~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~  119 (519)
T PLN00168         42 AVPLLGSLVWLTNS--SADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESD  119 (519)
T ss_pred             CCcccccHHhhccc--cccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCC
Confidence            59999999876421  235778899999999999999999999999999999999998877777765543333445532 


Q ss_pred             cccc--cCChhHHHHHH-HHHhhhCCCCchhh----------h-------------------hHHHHHHHHHHHHcCCCC
Q 039939           81 SLLT--VSGDLHKKLRN-VAVSFIGASKSTPA----------F-------------------LHSFTINLMVKHLLSIEP  128 (411)
Q Consensus        81 ~l~~--~~g~~~~~~R~-~~~~~~~~~~l~~~----------~-------------------~~~~~~~~~~~~~fG~~~  128 (411)
                      +++.  .+|+.|+++|+ +++++|+.++++..          +                   ++.++.++++.++||.+.
T Consensus       120 ~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~  199 (519)
T PLN00168        120 NTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERL  199 (519)
T ss_pred             CceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCc
Confidence            3433  68999999986 78899998776651          0                   001777788899999987


Q ss_pred             ChhHHHHHHHHHHHHH---hh----hcccCccC---CCcccHHHHHHHHHHHHHHHHHHHHHHhhcc---c---------
Q 039939          129 EEPIAFKILEDFQTFM---KG----FVSLPVYI---PGTHYANAVKARARLSRTVREIVRERQHENM---R---------  186 (411)
Q Consensus       129 ~~~~~~~~~~~~~~~~---~~----~~~~p~~~---p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~---------  186 (411)
                      ++.....+...+..+.   ..    ...+|.+.   ....+++..++.+.+.+++.++++++++...   .         
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  279 (519)
T PLN00168        200 DEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKET  279 (519)
T ss_pred             ChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccc
Confidence            6432222323222221   11    11233211   1112334456777888888888887764320   0         


Q ss_pred             CCCCchHHHHHccC-------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCC
Q 039939          187 AGEGDFLDVILKKR-------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEE  258 (411)
Q Consensus       187 ~~~~d~l~~ll~~~-------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  258 (411)
                      ....|+++.+++..       .++++ ++..++.++++||+|||+ +++|++++|++||++|+|+++||+++++.+  ..
T Consensus       280 ~~~~d~l~~ll~~~~~~~~~~~lt~~-~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~--~~  356 (519)
T PLN00168        280 TFEHSYVDTLLDIRLPEDGDRALTDD-EIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDD--QE  356 (519)
T ss_pred             cccccHHHHHHhhhccccccCCCCHH-HHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC--CC
Confidence            01458999998631       48888 999999999999999999 999999999999999999999999998642  25


Q ss_pred             CCChhhhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCC
Q 039939          259 PLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDK  337 (411)
Q Consensus       259 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~  337 (411)
                      .++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++
T Consensus       357 ~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~  436 (519)
T PLN00168        357 EVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAG  436 (519)
T ss_pred             CCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCC
Confidence            68999999999999999999999999987 48999999999999999999999999999999999999999999999974


Q ss_pred             cc--------CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc----cccccccCCceEEEEeC
Q 039939          338 AS--------VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA----YPYVEFRRGLLLEIERT  405 (411)
Q Consensus       338 ~~--------~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~----~~~~~~~~~~~v~~~~r  405 (411)
                      ..        .....++|||+|+|.|||++||++|++++++.|+++|+|++.++.....    ..++.++++++|++++|
T Consensus       437 ~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  516 (519)
T PLN00168        437 GDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPR  516 (519)
T ss_pred             CCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEec
Confidence            21        1345799999999999999999999999999999999999876543221    13456678899999998


Q ss_pred             C
Q 039939          406 N  406 (411)
Q Consensus       406 ~  406 (411)
                      +
T Consensus       517 ~  517 (519)
T PLN00168        517 R  517 (519)
T ss_pred             c
Confidence            6


No 14 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.4e-67  Score=468.70  Aligned_cols=402  Identities=20%  Similarity=0.304  Sum_probs=332.1

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccc-cCCCCeEEecChhhhHHHHhcCCcc-ccc-cCCh--hHHhh
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSH-LFCSPAIVSCDHELNMFILQNEEKY-FQA-SYPK--PMHGI   76 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~-~~~~~~vvv~~pe~~~~vl~~~~~~-~~~-~~~~--~~~~~   76 (411)
                      ++||+|.+..+ ..+...+.+.....++++|||||+.. +|+...|++.+|++++.++.+.+.+ +.. ....  .-++.
T Consensus        57 ~~~~l~~l~~~-~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~~~w~~~rd~  135 (519)
T KOG0159|consen   57 GLPFLGLLWIW-RAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLIEPWVAYRDF  135 (519)
T ss_pred             CccHHHHHHHH-HhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcccccchhhhhHHh
Confidence            58899988874 33334578999999999999999999 6779999999999999999987743 331 1111  12345


Q ss_pred             hcc-ccccccCChhHHHHHHHHHhhh-CCCCchhh----------hhHH----------------------HHHHHHHHH
Q 039939           77 LGK-LSLLTVSGDLHKKLRNVAVSFI-GASKSTPA----------FLHS----------------------FTINLMVKH  122 (411)
Q Consensus        77 ~g~-~~l~~~~g~~~~~~R~~~~~~~-~~~~l~~~----------~~~~----------------------~~~~~~~~~  122 (411)
                      ++. .|++..+|++|.+.|..+++.+ ++++++..          ++..                      ++++.++.+
T Consensus       136 ~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V  215 (519)
T KOG0159|consen  136 RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESICLV  215 (519)
T ss_pred             hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHH
Confidence            543 5899999999999999998765 44444431          1110                      999999999


Q ss_pred             HcCCCCC------hhHHHHHHHHHHHHHhhhcc---cC-c--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccC---
Q 039939          123 LLSIEPE------EPIAFKILEDFQTFMKGFVS---LP-V--YIPGTHYANAVKARARLSRTVREIVRERQHENMRA---  187 (411)
Q Consensus       123 ~fG~~~~------~~~~~~~~~~~~~~~~~~~~---~p-~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---  187 (411)
                      +||.+.+      +++...+++++..++.....   .| +  ++++..|++..++.+.+.+...++|++..++-+.+   
T Consensus       216 ~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~  295 (519)
T KOG0159|consen  216 LLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSA  295 (519)
T ss_pred             HHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9998764      25677788887777654322   23 2  67888999999999999999999998776553211   


Q ss_pred             --CCCchHHHHHccCCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhh
Q 039939          188 --GEGDFLDVILKKRSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWED  264 (411)
Q Consensus       188 --~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  264 (411)
                        ...+.+..++...+++.+ ++..+++.+++||.|||+ ++.|+||+|++||++|++|++|+.++.+.+  +..++.+.
T Consensus       296 ~~~~~~~l~~~L~~~~l~~k-~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~--~~~~~~~~  372 (519)
T KOG0159|consen  296 GSEYTGSLLELLLRKELSRK-DAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSG--NSELTQKA  372 (519)
T ss_pred             ccchhHHHHHHHHHccCCHH-HHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCc--ccccchHH
Confidence              223455555555679999 999999999999999999 999999999999999999999999998864  36789999


Q ss_pred             hccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCCC
Q 039939          265 YQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVIS  342 (411)
Q Consensus       265 ~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~~  342 (411)
                      +.++|||.|||||++||||.+++..|+..+|.+++||.|||||.|.++.+.+.+||++|++|++|+|||||+++  ..++
T Consensus       373 l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~p  452 (519)
T KOG0159|consen  373 LTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTIHP  452 (519)
T ss_pred             HhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988  4578


Q ss_pred             CceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCc--cccccccccCCceEEEEeCCC
Q 039939          343 KRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYP--IAYPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       343 ~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~~  407 (411)
                      ..++|||.|+|+|+||++|.+|+-++||+|+++|+++..++...  ....++.|..++.++|++|+.
T Consensus       453 F~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  453 FASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             ceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcceeeeeCCC
Confidence            99999999999999999999999999999999999998875332  234456777789999999863


No 15 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=4.8e-66  Score=494.20  Aligned_cols=392  Identities=18%  Similarity=0.237  Sum_probs=305.1

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccc---cccCCCCeEEecChhhhHHHHhcCCccccccC-ChhHHhh
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFK---SHLFCSPAIVSCDHELNMFILQNEEKYFQASY-PKPMHGI   76 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~---~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~-~~~~~~~   76 (411)
                      +++|++||++.+....  ...++++.+...+||..++   .++++.++++|+||+++++||.++...|.++. .......
T Consensus        37 ~~~pl~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~~~  114 (500)
T PLN02169         37 KNWPFLGMLPGMLHQI--PRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIFDV  114 (500)
T ss_pred             CCCCcccchHHHHHcc--CcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHHHh
Confidence            3689999998886542  2356666666667887655   57789999999999999999987655555443 2233445


Q ss_pred             hccccccccCChhHHHHHHHHHhhhCCCCchh------------hh---hH----------------HHHHHHHHHHHcC
Q 039939           77 LGKLSLLTVSGDLHKKLRNVAVSFIGASKSTP------------AF---LH----------------SFTINLMVKHLLS  125 (411)
Q Consensus        77 ~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~------------~~---~~----------------~~~~~~~~~~~fG  125 (411)
                      +| .|+++++|+.|+++|++++++|+..++..            .+   ++                .++++++++++||
T Consensus       115 ~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  193 (500)
T PLN02169        115 LG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTG  193 (500)
T ss_pred             hc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeC
Confidence            56 79999999999999999999998876532            01   11                0899999999999


Q ss_pred             CCCChhH----HHHHHHHHHHHH---hhhcccC-------ccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcc-----c
Q 039939          126 IEPEEPI----AFKILEDFQTFM---KGFVSLP-------VYIPGTHYANAVKARARLSRTVREIVRERQHENM-----R  186 (411)
Q Consensus       126 ~~~~~~~----~~~~~~~~~~~~---~~~~~~p-------~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~  186 (411)
                      .+.+...    ...+.+.+....   ......|       .+++....++..++.+.+.+++.++|+++++...     .
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~  273 (500)
T PLN02169        194 YDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAETE  273 (500)
T ss_pred             CCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            8753210    112222222111   1111112       1333344566678888999999999988865421     1


Q ss_pred             CCCCchHHHHHccC--------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCC
Q 039939          187 AGEGDFLDVILKKR--------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDE  257 (411)
Q Consensus       187 ~~~~d~l~~ll~~~--------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  257 (411)
                      +...|+++.+++..        .++++ ++.+++.++++||+|||+ +++|++++|++||++|+|+++||+++       
T Consensus       274 ~~~~d~l~~ll~~~~~~~~~~~~~~~~-~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v-------  345 (500)
T PLN02169        274 PYSKDALTYYMNVDTSKYKLLKPKKDK-FIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK-------  345 (500)
T ss_pred             CCCcCHHHHHHhccccccccccCCChH-HHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh-------
Confidence            12368999888642        25666 899999999999999999 99999999999999999999999875       


Q ss_pred             CCCChhhhccChhHHHHHHHhhcCCCCCcccceeecccccc-CCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCC
Q 039939          258 EPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKF-KEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWT  335 (411)
Q Consensus       258 ~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl  335 (411)
                        ++.+++.+||||+|||+|+||++|++|.+.|.+.+|.++ +||.|||||.|++++|++||||++| +||++|+||||+
T Consensus       346 --~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl  423 (500)
T PLN02169        346 --FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWI  423 (500)
T ss_pred             --CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccC
Confidence              357899999999999999999999999988888877665 9999999999999999999999999 899999999999


Q ss_pred             CCcc----CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc--ccccccccCCceEEEEeC
Q 039939          336 DKAS----VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI--AYPYVEFRRGLLLEIERT  405 (411)
Q Consensus       336 ~~~~----~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r  405 (411)
                      +++.    .++..|+|||+|+|.|+|++||++|++++++.|+++|++++.++....  ...++.+++++.|++++|
T Consensus       424 ~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        424 SDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             CCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEEeC
Confidence            7642    236789999999999999999999999999999999999997654332  223467788999999987


No 16 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.8e-67  Score=501.74  Aligned_cols=395  Identities=27%  Similarity=0.448  Sum_probs=323.8

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HH---hh
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MH---GI   76 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~---~~   76 (411)
                      +++|++||++++..   .++++.++.+++++||+||++++++.++++|+||+++++++.++...++..+... +.   ..
T Consensus         5 ~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~   81 (463)
T PF00067_consen    5 PPLPILGNLLQFRR---KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGP   81 (463)
T ss_dssp             SSBTTTBTHHHHHT---THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHH
T ss_pred             CCcCceeEHHHhcC---CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccccc
Confidence            36999999999975   3467889999999999999999999999999999999999998877777653322 22   23


Q ss_pred             hccccccccCChhHHHHHHHHHhhhCCC-Cc--hhh-------hh-------------------HHHHHHHHHHHHcCCC
Q 039939           77 LGKLSLLTVSGDLHKKLRNVAVSFIGAS-KS--TPA-------FL-------------------HSFTINLMVKHLLSIE  127 (411)
Q Consensus        77 ~g~~~l~~~~g~~~~~~R~~~~~~~~~~-~l--~~~-------~~-------------------~~~~~~~~~~~~fG~~  127 (411)
                      ..+.+++..+++.|+.+|+++.+.|+.. .+  ...       ++                   ..+++++++.++||.+
T Consensus        82 ~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG~~  161 (463)
T PF00067_consen   82 FGGKGLFFSDGERWRRQRRLLAPAFSSKKILKLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFGKD  161 (463)
T ss_dssp             HTTTSSTTSSHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHSSH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccce
Confidence            4457899999999999999999999887 22  110       01                   1199999999999987


Q ss_pred             CC---hhHHHHHHHHHHHHHhhh--------cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccC--CCCch
Q 039939          128 PE---EPIAFKILEDFQTFMKGF--------VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRA--GEGDF  192 (411)
Q Consensus       128 ~~---~~~~~~~~~~~~~~~~~~--------~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~d~  192 (411)
                      .+   +....++.+.+..+...+        ..+|+  +++....+...++.+.+.+++.++++++++.....  ...|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~  241 (463)
T PF00067_consen  162 FGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDESRRDL  241 (463)
T ss_dssp             HHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSSSCSSH
T ss_pred             eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            43   333334444444442211        12332  45555566667777889999999999988775333  57899


Q ss_pred             HHHHHccC-------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhh
Q 039939          193 LDVILKKR-------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWED  264 (411)
Q Consensus       193 l~~ll~~~-------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  264 (411)
                      ++.++...       .++.+ ++...+..+++||++||+ +++|++++|++||++|+++++||+++.+++   ..++.++
T Consensus       242 l~~ll~~~~~~~~~~~ls~~-~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~~  317 (463)
T PF00067_consen  242 LDSLLQASSDSDGPSGLSDE-EIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG---REITFED  317 (463)
T ss_dssp             HHHHHHHHHTTTTTSSSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS---SSHHHHH
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccc
Confidence            99999864       58888 999999999999999999 999999999999999999999999998543   4789999


Q ss_pred             hccChhHHHHHHHhhcCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---C
Q 039939          265 YQQMEFTNNVILEAMRCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS---V  340 (411)
Q Consensus       265 ~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~---~  340 (411)
                      ++++|||+|||+|+||++|+++ .++|++.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++...   .
T Consensus       318 l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~  397 (463)
T PF00067_consen  318 LSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNR  397 (463)
T ss_dssp             HGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999 78899999999999999999999999999999999999999999999999864   5


Q ss_pred             CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc--c--cccccccCCceEEE
Q 039939          341 ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI--A--YPYVEFRRGLLLEI  402 (411)
Q Consensus       341 ~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~--~--~~~~~~~~~~~v~~  402 (411)
                      ....++|||.|+|.|||++||++|++++++.||++|++++.++....  .  ..++.++.++.|.|
T Consensus       398 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  398 PSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             SSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            78899999999999999999999999999999999999997654332  1  13577788888875


No 17 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6.3e-66  Score=496.98  Aligned_cols=395  Identities=19%  Similarity=0.290  Sum_probs=306.2

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HHhhhc--
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MHGILG--   78 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~~~~g--   78 (411)
                      ++|++||++.+..     .++.++.+|+++||++|++++++.++|+++||+++++++.++...|+.+.... .....+  
T Consensus        43 ~~Pl~G~l~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~  117 (516)
T PLN02183         43 GLPIIGNMLMMDQ-----LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDR  117 (516)
T ss_pred             CCCeeccHHhcCC-----cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCC
Confidence            5999999987732     24567899999999999999999999999999999999988766666554322 122222  


Q ss_pred             cccccccCChhHHHHHHH-HHhhhCCCCchhh--------------------------hhHHHHHHHHHHHHcCCCCChh
Q 039939           79 KLSLLTVSGDLHKKLRNV-AVSFIGASKSTPA--------------------------FLHSFTINLMVKHLLSIEPEEP  131 (411)
Q Consensus        79 ~~~l~~~~g~~~~~~R~~-~~~~~~~~~l~~~--------------------------~~~~~~~~~~~~~~fG~~~~~~  131 (411)
                      ..+++..+|+.|+++|++ ++++|+.+++...                          .+..+++++++.++||...+. 
T Consensus       118 ~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~-  196 (516)
T PLN02183        118 ADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVRDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFGSSSNE-  196 (516)
T ss_pred             CceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcCcccc-
Confidence            246778899999999998 5788886654430                          011189999999999987654 


Q ss_pred             HHHHHHHHHHHHHhhh------cccCc--cC-CCcccHHHHHHHHHHHHHHHHHHHHHHhhcc--------cCCCCchHH
Q 039939          132 IAFKILEDFQTFMKGF------VSLPV--YI-PGTHYANAVKARARLSRTVREIVRERQHENM--------RAGEGDFLD  194 (411)
Q Consensus       132 ~~~~~~~~~~~~~~~~------~~~p~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~d~l~  194 (411)
                      ....+.+.+..+...+      ..+|+  ++ +....++..++.+.+.+++.++++++.+...        .....|+++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~  276 (516)
T PLN02183        197 GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVD  276 (516)
T ss_pred             hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHH
Confidence            2233444444332211      12232  12 2222345566677788888887776643210        012458999


Q ss_pred             HHHccC----------------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCC
Q 039939          195 VILKKR----------------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDE  257 (411)
Q Consensus       195 ~ll~~~----------------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  257 (411)
                      .+++..                .++++ ++..++.++++||+|||+ +++|++++|++||++|+|+++|++++++.+   
T Consensus       277 ~ll~~~~~~~~~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~---  352 (516)
T PLN02183        277 DLLAFYSEEAKVNESDDLQNSIKLTRD-NIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLN---  352 (516)
T ss_pred             HHHHhhhccccccccccccccCCCCHH-HHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC---
Confidence            988621                37778 999999999999999999 999999999999999999999999998642   


Q ss_pred             CCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCC
Q 039939          258 EPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDK  337 (411)
Q Consensus       258 ~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~  337 (411)
                      ..++.+++.++|||+|||+|+||++|++|.+.|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++
T Consensus       353 ~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~  432 (516)
T PLN02183        353 RRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKP  432 (516)
T ss_pred             CCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCC
Confidence            46899999999999999999999999999988999999999999999999999999999999999999999999999975


Q ss_pred             cc----CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc------ccc-cccccCCceEEEEeCC
Q 039939          338 AS----VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI------AYP-YVEFRRGLLLEIERTN  406 (411)
Q Consensus       338 ~~----~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~------~~~-~~~~~~~~~v~~~~r~  406 (411)
                      +.    .+...++|||+|+|.|+|++||++|+++++|+|+++|++++.++..+.      ... +..++.++.+.+++|-
T Consensus       433 ~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        433 GVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRL  512 (516)
T ss_pred             CCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCC
Confidence            42    245689999999999999999999999999999999999987654221      111 1223446777777773


No 18 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.5e-65  Score=490.23  Aligned_cols=397  Identities=18%  Similarity=0.270  Sum_probs=311.1

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh--HHhhhc-
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--MHGILG-   78 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--~~~~~g-   78 (411)
                      ++|++||++.+..     +++.++.+++++||+||++++++.++|+++||+++++++.++...|..+....  .....+ 
T Consensus        38 ~~Pl~G~l~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~  112 (504)
T PLN00110         38 GWPLLGALPLLGN-----MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGA  112 (504)
T ss_pred             CCCeeechhhcCC-----chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCC
Confidence            5899999987742     46789999999999999999999999999999999999988766676654322  112233 


Q ss_pred             cccccccCChhHHHHHHHHHh-hhCCCCchhh----------hh-------------------HHHHHHHHHHHHcCCCC
Q 039939           79 KLSLLTVSGDLHKKLRNVAVS-FIGASKSTPA----------FL-------------------HSFTINLMVKHLLSIEP  128 (411)
Q Consensus        79 ~~~l~~~~g~~~~~~R~~~~~-~~~~~~l~~~----------~~-------------------~~~~~~~~~~~~fG~~~  128 (411)
                      ..++++.+|+.|+++|+++++ .|+.++++..          ++                   ..++++++++++||.+.
T Consensus       113 ~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~  192 (504)
T PLN00110        113 QDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRRV  192 (504)
T ss_pred             CceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcc
Confidence            246777889999999999985 6776655430          00                   00778999999999865


Q ss_pred             -C--hhHHHHHHHHHHHHHhhh------cccCc--cCCCc-ccHHHHHHHHHHHHHHHHHHHHHHhhccc-CCCCchHHH
Q 039939          129 -E--EPIAFKILEDFQTFMKGF------VSLPV--YIPGT-HYANAVKARARLSRTVREIVRERQHENMR-AGEGDFLDV  195 (411)
Q Consensus       129 -~--~~~~~~~~~~~~~~~~~~------~~~p~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~d~l~~  195 (411)
                       .  ......+.+.+.......      ..+|.  +++.. ..++..+..+.+.+++.+.++++++.... ....|+++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~  272 (504)
T PLN00110        193 FETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDV  272 (504)
T ss_pred             cccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhH
Confidence             1  112334555444433211      11232  22211 12344555677778888888777654211 234689999


Q ss_pred             HHccC------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 039939          196 ILKKR------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQM  268 (411)
Q Consensus       196 ll~~~------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l  268 (411)
                      +++..      .++.+ ++..++..+++||+|||+ +++|++++|++||++|+|+++|++++++.+   ..++++++++|
T Consensus       273 ll~~~~~~~~~~l~~~-~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~~~~~l  348 (504)
T PLN00110        273 VMANQENSTGEKLTLT-NIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRN---RRLVESDLPKL  348 (504)
T ss_pred             HhhcccccCCCCCCHH-HHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CCCCHHHhhcC
Confidence            99642      47888 999999999999999999 999999999999999999999999998643   46899999999


Q ss_pred             hhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--C----C
Q 039939          269 EFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--V----I  341 (411)
Q Consensus       269 ~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~----~  341 (411)
                      |||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++..  .    .
T Consensus       349 pyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~  428 (504)
T PLN00110        349 PYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGN  428 (504)
T ss_pred             hHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCC
Confidence            9999999999999999997 7899999999999999999999999999999999999999999999997541  1    1


Q ss_pred             CCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc----cccccccCCceEEEEeCCC
Q 039939          342 SKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA----YPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       342 ~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~----~~~~~~~~~~~v~~~~r~~  407 (411)
                      ...++|||+|+|.|+|++||++|+++++++|+++|++++.++.....    ..++.++.++.+++++|.+
T Consensus       429 ~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  498 (504)
T PLN00110        429 DFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLH  498 (504)
T ss_pred             eeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCCC
Confidence            24799999999999999999999999999999999999876543321    2234667899999999963


No 19 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.3e-65  Score=495.61  Aligned_cols=395  Identities=19%  Similarity=0.284  Sum_probs=304.0

Q ss_pred             ccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HHhhhcccccc
Q 039939            5 ICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MHGILGKLSLL   83 (411)
Q Consensus         5 ~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~~~~g~~~l~   83 (411)
                      .+||+..+.+    +.++..+.+++++|||||++++++.++++++||+.+++++.++...+....... .....| .+++
T Consensus       141 ~~G~l~~i~~----g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g-~~l~  215 (633)
T PLN02738        141 AKGSISAVRG----EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG-KGLI  215 (633)
T ss_pred             ccCcHHHhcC----chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC-Ccee
Confidence            4677766643    457889999999999999999999999999999999999987665565443222 222334 6788


Q ss_pred             ccCChhHHHHHHHHHhhhCCCCchhh--hhH---------------------------HHHHHHHHHHHcCCCCCh----
Q 039939           84 TVSGDLHKKLRNVAVSFIGASKSTPA--FLH---------------------------SFTINLMVKHLLSIEPEE----  130 (411)
Q Consensus        84 ~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~---------------------------~~~~~~~~~~~fG~~~~~----  130 (411)
                      +.+|+.|+.+|+++++.|+..++...  .+.                           .+++++++.++||.+++.    
T Consensus       216 ~~dge~wr~rRr~l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~  295 (633)
T PLN02738        216 PADGEIWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND  295 (633)
T ss_pred             cCCcHHHHHHHHhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc
Confidence            89999999999999999988765540  000                           099999999999988652    


Q ss_pred             -hHHHHHHHHHHHHHh-hhcccC-ccCCC-----cccHHHHHHHHHHHHHHHHHHHHHHhh---c--------ccCCCCc
Q 039939          131 -PIAFKILEDFQTFMK-GFVSLP-VYIPG-----THYANAVKARARLSRTVREIVRERQHE---N--------MRAGEGD  191 (411)
Q Consensus       131 -~~~~~~~~~~~~~~~-~~~~~p-~~~p~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~---~--------~~~~~~d  191 (411)
                       .....+.+.+..+.. ....++ +.+|.     ...++..++.+.+...+.++++.+++.   .        ......|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~d  375 (633)
T PLN02738        296 TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPS  375 (633)
T ss_pred             hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccch
Confidence             111222222222111 111122 11111     112333444555555555555433211   0        0123458


Q ss_pred             hHHHHHccC-CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccCh
Q 039939          192 FLDVILKKR-SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQME  269 (411)
Q Consensus       192 ~l~~ll~~~-~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~  269 (411)
                      +++.+++.. +++.+ ++.+++..+++||+|||+ +++|++++|++||++|+||++|+++++++    ..++++++++||
T Consensus       376 il~~Ll~~~~~ls~~-~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~----~~~t~edL~kLP  450 (633)
T PLN02738        376 ILHFLLASGDDVSSK-QLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD----RFPTIEDMKKLK  450 (633)
T ss_pred             HHHHHHHcCCCCCHH-HHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC----CCCCHHHHccCH
Confidence            999998765 58888 999999999999999999 99999999999999999999999999863    468999999999


Q ss_pred             hHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc-----cCCCCc
Q 039939          270 FTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA-----SVISKR  344 (411)
Q Consensus       270 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~-----~~~~~~  344 (411)
                      ||+|||+|+|||+|+++.+.|++.+|.+++||.|||||.|.++.+.+||||++||||++|+||||+.+.     ......
T Consensus       451 YL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~  530 (633)
T PLN02738        451 YTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFS  530 (633)
T ss_pred             HHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCc
Confidence            999999999999999999889999999999999999999999999999999999999999999998532     124568


Q ss_pred             eeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc---ccccccccCCceEEEEeCCCCC
Q 039939          345 VMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI---AYPYVEFRRGLLLEIERTNGFD  409 (411)
Q Consensus       345 ~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~v~~~~r~~~~  409 (411)
                      ++|||.|+|.|+|++||++|++++++.|+++|+|++.++..+.   ...++.++++++|++++|..++
T Consensus       531 ~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        531 YLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             eeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCCCC
Confidence            9999999999999999999999999999999999997654322   1235677889999999997553


No 20 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.4e-65  Score=493.12  Aligned_cols=396  Identities=17%  Similarity=0.262  Sum_probs=311.8

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhh---c
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGIL---G   78 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~---g   78 (411)
                      ++|++||++++..     +++.++.+++++||++|++++++.++++++||+++++++.++...|.++........+   +
T Consensus        41 ~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~  115 (517)
T PLN02687         41 GWPVLGNLPQLGP-----KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNY  115 (517)
T ss_pred             CCCccccHHhcCC-----chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCC
Confidence            5899999988843     4778999999999999999999999999999999999998876677765443222222   2


Q ss_pred             cccccccCChhHHHHHHHHH-hhhCCCCchhh--------------h--------------hHHHHHHHHHHHHcCCCCC
Q 039939           79 KLSLLTVSGDLHKKLRNVAV-SFIGASKSTPA--------------F--------------LHSFTINLMVKHLLSIEPE  129 (411)
Q Consensus        79 ~~~l~~~~g~~~~~~R~~~~-~~~~~~~l~~~--------------~--------------~~~~~~~~~~~~~fG~~~~  129 (411)
                      ..+++..+|+.|+++|++++ +.|+.++++..              +              +..+++++++.++||.++.
T Consensus       116 ~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  195 (517)
T PLN02687        116 QDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGRRVF  195 (517)
T ss_pred             ceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCcccc
Confidence            24566678999999999998 78987765530              0              0118899999999998752


Q ss_pred             ----hhHHHHHHHHHHHHHhhh------cccCc--cCCCc-ccHHHHHHHHHHHHHHHHHHHHHHhhcc--cCCCCchHH
Q 039939          130 ----EPIAFKILEDFQTFMKGF------VSLPV--YIPGT-HYANAVKARARLSRTVREIVRERQHENM--RAGEGDFLD  194 (411)
Q Consensus       130 ----~~~~~~~~~~~~~~~~~~------~~~p~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~d~l~  194 (411)
                          +.....+.+.+..+....      ..+|.  +++.. ..++..+....+.+++.++++++++...  .....|+++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~  275 (517)
T PLN02687        196 AGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLS  275 (517)
T ss_pred             ccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccHHH
Confidence                112334444444443211      11231  22211 2344556677788888899988876531  123569999


Q ss_pred             HHHccC----------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChh
Q 039939          195 VILKKR----------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWE  263 (411)
Q Consensus       195 ~ll~~~----------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  263 (411)
                      .+++..          .++++ ++..++..+++||+|||+ +++|++++|++||++|+|+++|++++.+.+   ..++.+
T Consensus       276 ~ll~~~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~  351 (517)
T PLN02687        276 TLLALKREQQADGEGGRITDT-EIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD---RLVSES  351 (517)
T ss_pred             HHHHhhccccccccccCCCHH-HHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC---CCCCHH
Confidence            998631          37788 999999999999999999 999999999999999999999999988643   568999


Q ss_pred             hhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---
Q 039939          264 DYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS---  339 (411)
Q Consensus       264 ~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~---  339 (411)
                      ++.++|||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++..   
T Consensus       352 ~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~  431 (517)
T PLN02687        352 DLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAG  431 (517)
T ss_pred             HhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccc
Confidence            999999999999999999999996 7899999999999999999999999999999999999999999999997531   


Q ss_pred             ----CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCc---cc--ccc--ccccCCceEEEEeCC
Q 039939          340 ----VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYP---IA--YPY--VEFRRGLLLEIERTN  406 (411)
Q Consensus       340 ----~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~---~~--~~~--~~~~~~~~v~~~~r~  406 (411)
                          .....++|||+|+|.|+|++||++|+++++++|+++|++++.++..+   ..  ...  +.++.++.+++++|.
T Consensus       432 ~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        432 VDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             cccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence                23457999999999999999999999999999999999998765321   11  112  334457888888884


No 21 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1e-64  Score=482.88  Aligned_cols=398  Identities=18%  Similarity=0.275  Sum_probs=304.5

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHhhhcc
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHGILGK   79 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~~~g~   79 (411)
                      +|+|++||++++..    .+++.++.+|+++||++|++++++.++++|+||+++++++.++...|+++... ....+.|.
T Consensus         5 ~~lP~iG~l~~~~~----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          5 PGLPVIGNLLQLKE----KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CCCCccccHHHcCC----CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            36999999999864    24678999999999999999999999999999999999998877777665432 23334432


Q ss_pred             c-ccccc-CChhHHHHHHHHHh-hhCCCCchh--------------hh-----------------hHHHHHHHHHHHHcC
Q 039939           80 L-SLLTV-SGDLHKKLRNVAVS-FIGASKSTP--------------AF-----------------LHSFTINLMVKHLLS  125 (411)
Q Consensus        80 ~-~l~~~-~g~~~~~~R~~~~~-~~~~~~l~~--------------~~-----------------~~~~~~~~~~~~~fG  125 (411)
                      . ++++. +|+.|+++|+++.+ .|+...+..              .+                 +..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            2 34444 49999999987765 455433221              00                 011899999999999


Q ss_pred             CCCChhH----------HHHHHHHHHHHHhhhc------ccCc--cCCCcccHH-HHHHHHHHHHHHHHHHHHHHhhc-c
Q 039939          126 IEPEEPI----------AFKILEDFQTFMKGFV------SLPV--YIPGTHYAN-AVKARARLSRTVREIVRERQHEN-M  185 (411)
Q Consensus       126 ~~~~~~~----------~~~~~~~~~~~~~~~~------~~p~--~~p~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~  185 (411)
                      .+.+...          ...+...+..+.....      .+|.  +++...+.+ ..+....+.+++.++++++++.. .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8754311          0112222222222111      2232  333222222 22233344567777777665441 1


Q ss_pred             cCCCCchHHHHHccC-CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChh
Q 039939          186 RAGEGDFLDVILKKR-SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWE  263 (411)
Q Consensus       186 ~~~~~d~l~~ll~~~-~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  263 (411)
                      .....|+++.+++.. .++++ ++.+.+.++++||+|||+ +++|++++|++||++|+|+++||+.+++.+    .++.+
T Consensus       241 ~~~~~d~l~~ll~~~~~ls~~-~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~  315 (466)
T PLN02655        241 GEERDCYLDFLLSEATHLTDE-QLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE----RVTEE  315 (466)
T ss_pred             CCCcccHHHHHHhccCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC----CCCHH
Confidence            123468999999765 48888 999999999999999999 999999999999999999999999998742    38999


Q ss_pred             hhccChhHHHHHHHhhcCCCCCccc-ceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--C
Q 039939          264 DYQQMEFTNNVILEAMRCGNVVKFV-HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--V  340 (411)
Q Consensus       264 ~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~  340 (411)
                      +++++|||+|||+|+||++|+++.+ +|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++..  .
T Consensus       316 ~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~  395 (466)
T PLN02655        316 DLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESA  395 (466)
T ss_pred             HHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccC
Confidence            9999999999999999999999975 699999999999999999999999999999999999999999999997652  2


Q ss_pred             CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc---ccccccccCCceEEEEeCCC
Q 039939          341 ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI---AYPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       341 ~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~v~~~~r~~  407 (411)
                      ....++|||+|+|.|||++||+.+++++++.||++|++++.++....   ...++.+++++.|++.+|..
T Consensus       396 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        396 DMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecCC
Confidence            45789999999999999999999999999999999999987553211   12235577899999998863


No 22 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=8.3e-65  Score=485.63  Aligned_cols=403  Identities=19%  Similarity=0.257  Sum_probs=315.3

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HHhhhcc
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MHGILGK   79 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~~~~g~   79 (411)
                      .|||++|+.++++.....+.++.++.+|+++|||+|++++++.++++++|||++++++.+....|....... ....+| 
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~~-   96 (489)
T PLN02936         18 SGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLFG-   96 (489)
T ss_pred             CCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHhc-
Confidence            489999999998876555678999999999999999999999999999999999999987655555443322 223455 


Q ss_pred             ccccccCChhHHHHHHHHHhhhCCCCchhh---hhH---------------------------HHHHHHHHHHHcCCCCC
Q 039939           80 LSLLTVSGDLHKKLRNVAVSFIGASKSTPA---FLH---------------------------SFTINLMVKHLLSIEPE  129 (411)
Q Consensus        80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~---~~~---------------------------~~~~~~~~~~~fG~~~~  129 (411)
                      .++++.+|+.|+++|+++++.|+..++...   .+.                           .+++++++.++||.+++
T Consensus        97 ~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~  176 (489)
T PLN02936         97 SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYNFD  176 (489)
T ss_pred             CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCCcc
Confidence            688889999999999999999986555431   111                           09999999999999875


Q ss_pred             hhH-HHHHHHHHHHHHhh-----hcccCcc----C--CCcccHHHHHHHHHHHHHHHHHHHHHHhhcc------------
Q 039939          130 EPI-AFKILEDFQTFMKG-----FVSLPVY----I--PGTHYANAVKARARLSRTVREIVRERQHENM------------  185 (411)
Q Consensus       130 ~~~-~~~~~~~~~~~~~~-----~~~~p~~----~--p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------  185 (411)
                      ... ...+.+.+...+..     ...+|.+    +  ..+..++..++.+.+.+.+.++++++++...            
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~  256 (489)
T PLN02936        177 SLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYV  256 (489)
T ss_pred             ccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Confidence            311 11222222222111     1112211    0  0122345667777888888888876553210            


Q ss_pred             cCCCCchHHHHHccC-CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChh
Q 039939          186 RAGEGDFLDVILKKR-SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWE  263 (411)
Q Consensus       186 ~~~~~d~l~~ll~~~-~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  263 (411)
                      .....++++.+++.. +++.+ ++..++..+++||+|||+ +++|++++|++||++|+++++|++++++.    ..++++
T Consensus       257 ~~~~~d~l~~ll~~~~~~~~~-~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~----~~~~~~  331 (489)
T PLN02936        257 NDSDPSVLRFLLASREEVSSV-QLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG----RPPTYE  331 (489)
T ss_pred             ccCchHHHHHHHhccccCCHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC----CCCCHH
Confidence            012467999998764 58888 999999999999999999 99999999999999999999999999863    347899


Q ss_pred             hhccChhHHHHHHHhhcCCCCCcccc-eeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---
Q 039939          264 DYQQMEFTNNVILEAMRCGNVVKFVH-REAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS---  339 (411)
Q Consensus       264 ~~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~---  339 (411)
                      ++++||||+|||+|+||++|+++... |.+..|+.++||.||||+.|+++.+++||||++|+||++|+||||+.+..   
T Consensus       332 ~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~  411 (489)
T PLN02936        332 DIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPN  411 (489)
T ss_pred             HHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCcc
Confidence            99999999999999999999998754 45566777799999999999999999999999999999999999996441   


Q ss_pred             --CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc--cccccccCCceEEEEeCCCCC
Q 039939          340 --VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA--YPYVEFRRGLLLEIERTNGFD  409 (411)
Q Consensus       340 --~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~~~~  409 (411)
                        .....++|||.|+|.|||++||++|++++++.|+++|+++++++++...  ..++.+++++.|++++|.-.+
T Consensus       412 ~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~  485 (489)
T PLN02936        412 ETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYMTVSRRRVPD  485 (489)
T ss_pred             ccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEEEEEeeeCCC
Confidence              1245899999999999999999999999999999999999987654322  234567889999999996443


No 23 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.9e-64  Score=486.22  Aligned_cols=396  Identities=20%  Similarity=0.301  Sum_probs=305.6

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHH---hhhc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMH---GILG   78 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~---~~~g   78 (411)
                      ++|++||++++..    .++..++.+++++||++|++++++.++|+++|||++++++.++...|..+......   ...+
T Consensus        35 ~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~  110 (499)
T PLN03234         35 GLPIIGNLHQMEK----FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQG  110 (499)
T ss_pred             CCCeeccHHhcCC----CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCC
Confidence            5899999998853    24667899999999999999999999999999999999998877666655432111   1122


Q ss_pred             cccccccCChhHHHHHHHH-HhhhCCCCchhh----------h-------------------hHHHHHHHHHHHHcCCCC
Q 039939           79 KLSLLTVSGDLHKKLRNVA-VSFIGASKSTPA----------F-------------------LHSFTINLMVKHLLSIEP  128 (411)
Q Consensus        79 ~~~l~~~~g~~~~~~R~~~-~~~~~~~~l~~~----------~-------------------~~~~~~~~~~~~~fG~~~  128 (411)
                      ........++.|+++|+.+ .+.|+.+++...          +                   +..++++++++++||.+.
T Consensus       111 ~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  190 (499)
T PLN03234        111 RELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRY  190 (499)
T ss_pred             CccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCCcc
Confidence            2212345678999999985 688987665431          1                   011899999999999887


Q ss_pred             Ch--hHHHHHHHHHHHHHhhhc------ccCcc--CC--CcccHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCCCchHHH
Q 039939          129 EE--PIAFKILEDFQTFMKGFV------SLPVY--IP--GTHYANAVKARARLSRTVREIVRERQHENM-RAGEGDFLDV  195 (411)
Q Consensus       129 ~~--~~~~~~~~~~~~~~~~~~------~~p~~--~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~d~l~~  195 (411)
                      +.  .+..++.+.+.+....+.      .+|++  ++  ....++..++.+.+.+++.++++++++... .....|+++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~  270 (499)
T PLN03234        191 NEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQETESFIDL  270 (499)
T ss_pred             cccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcccHHHH
Confidence            53  123444444443322111      12211  11  112346677888888999999988764321 1235688888


Q ss_pred             HHccC-------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhcc
Q 039939          196 ILKKR-------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQ  267 (411)
Q Consensus       196 ll~~~-------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~  267 (411)
                      +++..       .++++ ++..++.++++||+|||+ +++|++++|++||++|+|+++|+++++++.   ..++++++.+
T Consensus       271 l~~~~~~~~~~~~~~~~-~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~---~~~~~~~l~~  346 (499)
T PLN03234        271 LMQIYKDQPFSIKFTHE-NVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK---GYVSEEDIPN  346 (499)
T ss_pred             HHHHhhccCcCCCCCHH-HHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CCCCHHHHhc
Confidence            88532       36777 999999999999999999 999999999999999999999999998642   5689999999


Q ss_pred             ChhHHHHHHHhhcCCCCCccc-ceeeccccccCCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCCCCcc-----C
Q 039939          268 MEFTNNVILEAMRCGNVVKFV-HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWTDKAS-----V  340 (411)
Q Consensus       268 l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~-----~  340 (411)
                      ||||+|||+|+||++|+++.. +|++.+|++++||.|||||.|+++.+++||||++| +||++|+||||+++..     .
T Consensus       347 l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~  426 (499)
T PLN03234        347 LPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKG  426 (499)
T ss_pred             ChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCC
Confidence            999999999999999999984 79999999999999999999999999999999999 8999999999997642     2


Q ss_pred             CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCc---cc--ccc--ccccCCceEEEEeC
Q 039939          341 ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYP---IA--YPY--VEFRRGLLLEIERT  405 (411)
Q Consensus       341 ~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~---~~--~~~--~~~~~~~~v~~~~r  405 (411)
                      ....++|||+|+|.|||+++|++|+++++|.|+++|++++.++..+   ..  ...  ..+++.+.+.+++|
T Consensus       427 ~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        427 QDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            3568999999999999999999999999999999999999865321   11  112  24555666666654


No 24 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.1e-64  Score=486.38  Aligned_cols=397  Identities=20%  Similarity=0.237  Sum_probs=296.2

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhH-Hhhhc--
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPM-HGILG--   78 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~-~~~~g--   78 (411)
                      ++|++|+++.+.+.    ..+.++.+|+++||++|++++++.++|+++||+.+++++.++...+.++..... ..+.|  
T Consensus        37 ~~p~~g~l~~~~~~----~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~  112 (503)
T PLN02394         37 AVPIFGNWLQVGDD----LNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKG  112 (503)
T ss_pred             CCCeeeeHHhcCCC----chhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCC
Confidence            58999999887531    245789999999999999999999999999999999999877666665443322 22323  


Q ss_pred             cccccccCChhHHHHHHHHH-hhhCCCCchhh----------h--------------------hHHHHHHHHHHHHcCCC
Q 039939           79 KLSLLTVSGDLHKKLRNVAV-SFIGASKSTPA----------F--------------------LHSFTINLMVKHLLSIE  127 (411)
Q Consensus        79 ~~~l~~~~g~~~~~~R~~~~-~~~~~~~l~~~----------~--------------------~~~~~~~~~~~~~fG~~  127 (411)
                      .++++..+|+.|+++|+.+. +.|+.+++...          +                    +..++++++++++||.+
T Consensus       113 ~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~~  192 (503)
T PLN02394        113 QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRR  192 (503)
T ss_pred             CceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCCC
Confidence            23467788999999999986 88887766430          0                    01188899999999987


Q ss_pred             CChh---HHHHHHHHHHHHHhhh--------cccCccCCC-ccc-HHHHHHHHHHHH-HHHHHHHHHHhhc-----ccCC
Q 039939          128 PEEP---IAFKILEDFQTFMKGF--------VSLPVYIPG-THY-ANAVKARARLSR-TVREIVRERQHEN-----MRAG  188 (411)
Q Consensus       128 ~~~~---~~~~~~~~~~~~~~~~--------~~~p~~~p~-~~~-~~~~~~~~~~~~-~~~~~i~~~~~~~-----~~~~  188 (411)
                      ++..   ....+...........        ..+|++.+. ..+ +...+....... +...+++++++..     ....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  272 (503)
T PLN02394        193 FESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEG  272 (503)
T ss_pred             cccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcch
Confidence            7431   1111111111111110        011211111 011 111111111122 2233455554321     1123


Q ss_pred             CCchHHHHHccC---CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhh
Q 039939          189 EGDFLDVILKKR---SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWED  264 (411)
Q Consensus       189 ~~d~l~~ll~~~---~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  264 (411)
                      ..|+++.+++..   .++++ ++...+..+++||+|||+ +++|++++|++||++|+|+++||+++++.+   ..+++++
T Consensus       273 ~~d~l~~ll~~~~~~~l~~~-~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~---~~~~~~~  348 (503)
T PLN02394        273 LKCAIDHILEAQKKGEINED-NVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG---NQVTEPD  348 (503)
T ss_pred             hhhHHHHHHhccccCCCCHH-HHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC---CCCCHhH
Confidence            468999999743   57888 999999999999999999 999999999999999999999999998743   4688999


Q ss_pred             hccChhHHHHHHHhhcCCCCCccc-ceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc----
Q 039939          265 YQQMEFTNNVILEAMRCGNVVKFV-HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS----  339 (411)
Q Consensus       265 ~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~----  339 (411)
                      +++||||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|+++++++||||++|+||++|+||||++++.    
T Consensus       349 l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~  428 (503)
T PLN02394        349 THKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEA  428 (503)
T ss_pred             HhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccc
Confidence            999999999999999999999985 689999999999999999999999999999999999999999999997541    


Q ss_pred             -CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-cccc-----ccccccCCceEEEEeCC
Q 039939          340 -VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-PIAY-----PYVEFRRGLLLEIERTN  406 (411)
Q Consensus       340 -~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~~-----~~~~~~~~~~v~~~~r~  406 (411)
                       .....++|||+|+|.|+|++||++|+++++|.|+++|++++.++.. ....     ..+.+|+++.+++.+|.
T Consensus       429 ~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        429 NGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             cCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence             2356899999999999999999999999999999999999876542 2211     12447889999999995


No 25 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.3e-64  Score=486.84  Aligned_cols=397  Identities=18%  Similarity=0.232  Sum_probs=301.5

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhh---ccccccccCCCCeEEecChhhhHHHHhcCCccccccCC--hhHHhh
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIY---GQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP--KPMHGI   76 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~y---G~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~--~~~~~~   76 (411)
                      ++|++||++.+..++      ..+.+|.++|   |++|++++++.++++++||+.+++++.++...+.....  .....+
T Consensus        37 ~~p~~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         37 SWPIIGAALEQLKNY------DRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             CCCeecchHHHHhcc------chHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            599999998775421      2345666666   89999999999999999999999999865434433211  112234


Q ss_pred             hccccccccCChhHHHHHHHHHhhhCCCCchhh---h-----------hH----------------HHHHHHHHHHHcCC
Q 039939           77 LGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA---F-----------LH----------------SFTINLMVKHLLSI  126 (411)
Q Consensus        77 ~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~---~-----------~~----------------~~~~~~~~~~~fG~  126 (411)
                      +| .++++.+|+.|+++|+++++.|+.++++..   +           ++                .+++++++.++||.
T Consensus       111 ~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~  189 (516)
T PLN03195        111 LG-DGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGV  189 (516)
T ss_pred             hc-CeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCC
Confidence            45 678888999999999999999987665530   0           10                08999999999998


Q ss_pred             CCChhH----HHHHHHHHHHHHhhh---cccCc-----cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcc------cCC
Q 039939          127 EPEEPI----AFKILEDFQTFMKGF---VSLPV-----YIPGTHYANAVKARARLSRTVREIVRERQHENM------RAG  188 (411)
Q Consensus       127 ~~~~~~----~~~~~~~~~~~~~~~---~~~p~-----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~  188 (411)
                      +.+...    ...+.+.+.......   ...|.     +++....++..++...+.+++.++++++++...      ...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  269 (516)
T PLN03195        190 EIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKV  269 (516)
T ss_pred             CccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence            764210    112333332221110   01121     112112233445667788888888877764311      113


Q ss_pred             CCchHHHHHccC-----CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccC--------
Q 039939          189 EGDFLDVILKKR-----SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSK--------  254 (411)
Q Consensus       189 ~~d~l~~ll~~~-----~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~--------  254 (411)
                      ..|+++.+++..     .++++ ++.+++.++++||+|||+ +++|++++|++||++|+|+++|++++.+..        
T Consensus       270 ~~d~l~~ll~~~~~~~~~l~~~-~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~  348 (516)
T PLN03195        270 KHDILSRFIELGEDPDSNFTDK-SLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPED  348 (516)
T ss_pred             cccHHHHHHhccCCCCCCCCHH-HHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccc
Confidence            468999998532     37888 999999999999999999 999999999999999999999999886531        


Q ss_pred             ---------CCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeecccccc-CCEEeCCCcEEecchhhhccCCCCC-
Q 039939          255 ---------QDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKF-KEYLIPSGWKVLPVFTAAHFDLNLH-  323 (411)
Q Consensus       255 ---------~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-  323 (411)
                               +.+..++++++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|.++.+++||||++| 
T Consensus       349 ~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g  428 (516)
T PLN03195        349 SQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWG  428 (516)
T ss_pred             cchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhc
Confidence                     01245899999999999999999999999999988888887776 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCc---cCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc--cccccccCCc
Q 039939          324 ENPSEFNPSRWTDKA---SVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA--YPYVEFRRGL  398 (411)
Q Consensus       324 ~dp~~F~P~Rfl~~~---~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~  398 (411)
                      +||++|+||||++++   ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.....  ..++.+++++
T Consensus       429 ~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  508 (516)
T PLN03195        429 PDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMTILSMANGL  508 (516)
T ss_pred             cChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeeeEEecCCCE
Confidence            999999999999643   23456799999999999999999999999999999999999875543222  2346678899


Q ss_pred             eEEEEeCC
Q 039939          399 LLEIERTN  406 (411)
Q Consensus       399 ~v~~~~r~  406 (411)
                      .|++++|.
T Consensus       509 ~v~~~~r~  516 (516)
T PLN03195        509 KVTVSRRS  516 (516)
T ss_pred             EEEEEeCC
Confidence            99999884


No 26 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.7e-63  Score=477.06  Aligned_cols=399  Identities=14%  Similarity=0.203  Sum_probs=299.9

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhh-ccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhcc
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIY-GQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGK   79 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~y-G~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~   79 (411)
                      +++|++||++++......   ..++.++.++| |+||++++++.++|+|+||+++++++.++...|++++.......++.
T Consensus        46 ~~~P~iGnl~~l~~~~~~---~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~  122 (534)
T PLN03018         46 PGWPILGNLPELIMTRPR---SKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGD  122 (534)
T ss_pred             CCCCeeccHHHhccCCCc---chhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhcc
Confidence            369999999998532111   13455666666 79999999999999999999999999987777777654333333443


Q ss_pred             c--ccccc-CChhHHHHHHHHHhhhCCCCchh-----------hhh-------------------HHHHHHHHHHHHcCC
Q 039939           80 L--SLLTV-SGDLHKKLRNVAVSFIGASKSTP-----------AFL-------------------HSFTINLMVKHLLSI  126 (411)
Q Consensus        80 ~--~l~~~-~g~~~~~~R~~~~~~~~~~~l~~-----------~~~-------------------~~~~~~~~~~~~fG~  126 (411)
                      .  ++++. +|+.|+++|+++++.|...+...           .++                   ..++++++++++||.
T Consensus       123 ~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~  202 (534)
T PLN03018        123 NYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGR  202 (534)
T ss_pred             CCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCC
Confidence            2  46555 59999999999998875433221           010                   018999999999998


Q ss_pred             CCCh--------hH-HHHHHHHHHHHHhhhccc---------CccCCC----cccHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039939          127 EPEE--------PI-AFKILEDFQTFMKGFVSL---------PVYIPG----THYANAVKARARLSRTVREIVRERQHEN  184 (411)
Q Consensus       127 ~~~~--------~~-~~~~~~~~~~~~~~~~~~---------p~~~p~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~  184 (411)
                      +...        .. ...+...+.........+         |.++..    ....+.......+.+++.++++++++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  282 (534)
T PLN03018        203 RHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELW  282 (534)
T ss_pred             ccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7531        01 011111111111111111         211110    1112333345567778888888775431


Q ss_pred             --c-c-CCCCchHHHHHccC------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhcc
Q 039939          185 --M-R-AGEGDFLDVILKKR------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKS  253 (411)
Q Consensus       185 --~-~-~~~~d~l~~ll~~~------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  253 (411)
                        . . ....|+++.+++..      .++++ ++...+.++++||+|||+ +++|++++|+.||++|+|+++||+++++.
T Consensus       283 ~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~-~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~  361 (534)
T PLN03018        283 REKGGKAAVEDWLDTFITLKDQNGKYLVTPD-EIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGK  361 (534)
T ss_pred             hhccCCCCcccHHHHHHHhhcccCCCCCCHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence              1 1 12468999998532      27888 999999999999999999 99999999999999999999999999864


Q ss_pred             CCCCCCCChhhhccChhHHHHHHHhhcCCCCCccc-ceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCC
Q 039939          254 KQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFV-HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPS  332 (411)
Q Consensus       254 ~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~  332 (411)
                      +   ..++.+++.++|||+|||+|+||++|+++.+ +|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       362 ~---~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~Pe  438 (534)
T PLN03018        362 D---RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPE  438 (534)
T ss_pred             C---CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCc
Confidence            3   5689999999999999999999999999986 69999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc--------CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCC-Ccc---ccccccccCCceE
Q 039939          333 RWTDKAS--------VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADD-YPI---AYPYVEFRRGLLL  400 (411)
Q Consensus       333 Rfl~~~~--------~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~---~~~~~~~~~~~~v  400 (411)
                      ||+++++        .....++|||.|+|.|||++||++|+++++++|+++|++++.++. ...   ...++..++++.|
T Consensus       439 Rfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v  518 (534)
T PLN03018        439 RHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPLLL  518 (534)
T ss_pred             cCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceecCCCeEE
Confidence            9997542        134689999999999999999999999999999999999987653 211   1133456789999


Q ss_pred             EEEeCC
Q 039939          401 EIERTN  406 (411)
Q Consensus       401 ~~~~r~  406 (411)
                      ++++|.
T Consensus       519 ~~~~R~  524 (534)
T PLN03018        519 SVEPRL  524 (534)
T ss_pred             EEEecc
Confidence            999993


No 27 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2.1e-63  Score=478.24  Aligned_cols=377  Identities=20%  Similarity=0.321  Sum_probs=290.6

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhh--hcc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGI--LGK   79 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~--~g~   79 (411)
                      ++|++||++++..    .++..++.+|+++||++|++++++.++|+++||+++++++.++...|.+++.......  .|.
T Consensus        36 ~~p~~G~l~~l~~----~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~  111 (502)
T PLN02966         36 PLPVIGNLLQLQK----LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGR  111 (502)
T ss_pred             CCCeeccHHhcCC----CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCc
Confidence            5899999998843    2467899999999999999999999999999999999999876655654433222222  222


Q ss_pred             ccc-cccCChhHHHHHHH-HHhhhCCCCchh----------hh-------------------hHHHHHHHHHHHHcCCCC
Q 039939           80 LSL-LTVSGDLHKKLRNV-AVSFIGASKSTP----------AF-------------------LHSFTINLMVKHLLSIEP  128 (411)
Q Consensus        80 ~~l-~~~~g~~~~~~R~~-~~~~~~~~~l~~----------~~-------------------~~~~~~~~~~~~~fG~~~  128 (411)
                      .++ +..+|+.|+++|++ ++++|+..++..          .+                   +..+++++++.++||.+.
T Consensus       112 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~  191 (502)
T PLN02966        112 RDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKY  191 (502)
T ss_pred             ceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhCCcc
Confidence            223 45679999999998 788998876543          00                   011899999999999986


Q ss_pred             Ch--hHHHHHHHHHHHHHhhhc------ccCcc--CCC-ccc-HHHHHHHHHHHHHHHHHHHHHHhhc-ccCCCCchHHH
Q 039939          129 EE--PIAFKILEDFQTFMKGFV------SLPVY--IPG-THY-ANAVKARARLSRTVREIVRERQHEN-MRAGEGDFLDV  195 (411)
Q Consensus       129 ~~--~~~~~~~~~~~~~~~~~~------~~p~~--~p~-~~~-~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~d~l~~  195 (411)
                      +.  +...++.+.+..+.....      .+|+.  ++. ..+ .....+.+...+++.+.++++.... ......++++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  271 (502)
T PLN02966        192 NEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPETESMIDL  271 (502)
T ss_pred             CccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccHHHH
Confidence            42  233344444433221111      12210  111 111 1223344556666666666553321 11234688888


Q ss_pred             HHcc-------CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhcc
Q 039939          196 ILKK-------RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQ  267 (411)
Q Consensus       196 ll~~-------~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~  267 (411)
                      +++.       ..++.+ ++..++.++++||+|||+ +++|++++|++||++|+|+++||+++++.++ +..++++++++
T Consensus       272 l~~~~~~~~~~~~l~~~-~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~-~~~~~~~dl~~  349 (502)
T PLN02966        272 LMEIYKEQPFASEFTVD-NVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKG-STFVTEDDVKN  349 (502)
T ss_pred             HHHHHhccCcCCCCCHH-HHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccC-CCcCCHhhccC
Confidence            8842       137777 999999999999999999 9999999999999999999999999987532 24579999999


Q ss_pred             ChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCCCCcc---CCC
Q 039939          268 MEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWTDKAS---VIS  342 (411)
Q Consensus       268 l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~---~~~  342 (411)
                      ||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++++++||||++| |||++|+||||+++..   ...
T Consensus       350 lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~  429 (502)
T PLN02966        350 LPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTD  429 (502)
T ss_pred             CcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCc
Confidence            99999999999999999997 589999999999999999999999999999999999 9999999999997542   245


Q ss_pred             CceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCC
Q 039939          343 KRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADD  384 (411)
Q Consensus       343 ~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~  384 (411)
                      ..++|||+|+|.|+|++||++|+++++|.||++|+|++.++.
T Consensus       430 ~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        430 YEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             CCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            689999999999999999999999999999999999987654


No 28 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.3e-63  Score=478.95  Aligned_cols=398  Identities=19%  Similarity=0.277  Sum_probs=310.1

Q ss_pred             CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh--HHhhhcc
Q 039939            2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--MHGILGK   79 (411)
Q Consensus         2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--~~~~~g~   79 (411)
                      ++|++||++++..     +++.++.+++++||++|++++++.++++++||+++++++.++...|+++....  ....+|.
T Consensus        39 ~~pl~G~~~~~~~-----~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~  113 (514)
T PLN03112         39 RWPIVGNLLQLGP-----LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGC  113 (514)
T ss_pred             CCCeeeeHHhcCC-----chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCC
Confidence            5999999988842     46788999999999999999999999999999999999987766676543321  1123332


Q ss_pred             -ccccccCChhHHHHHHHHH-hhhCCCCchhh----------hhH-------------------HHHHHHHHHHHcCCCC
Q 039939           80 -LSLLTVSGDLHKKLRNVAV-SFIGASKSTPA----------FLH-------------------SFTINLMVKHLLSIEP  128 (411)
Q Consensus        80 -~~l~~~~g~~~~~~R~~~~-~~~~~~~l~~~----------~~~-------------------~~~~~~~~~~~fG~~~  128 (411)
                       .+++..+|+.|+++|+++. +.|+.++++..          +++                   .+++++++.++||.+.
T Consensus       114 ~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~  193 (514)
T PLN03112        114 GDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQY  193 (514)
T ss_pred             CceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCcc
Confidence             3456678999999999964 67887655541          110                   1788999999999875


Q ss_pred             Ch------hHHHHHHHHHHHHHhhh--c----ccCc--cC-CCcccHHHHHHHHHHHHHHHHHHHHHHhhcc----cCCC
Q 039939          129 EE------PIAFKILEDFQTFMKGF--V----SLPV--YI-PGTHYANAVKARARLSRTVREIVRERQHENM----RAGE  189 (411)
Q Consensus       129 ~~------~~~~~~~~~~~~~~~~~--~----~~p~--~~-p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~  189 (411)
                      ..      +....+.+.+..+....  .    .+|.  ++ +....++..++.+.+.+++.++++++++...    ....
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  273 (514)
T PLN03112        194 FGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKD  273 (514)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcc
Confidence            21      12334444444433221  1    1232  12 2122345566777888888888887665321    1234


Q ss_pred             CchHHHHHccC------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCCh
Q 039939          190 GDFLDVILKKR------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNW  262 (411)
Q Consensus       190 ~d~l~~ll~~~------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  262 (411)
                      .|+++.+++..      .++++ ++.+++..+++||+|||+ +++|++++|++||++|+|+++||+++++.+   +.++.
T Consensus       274 ~d~l~~ll~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~---~~~t~  349 (514)
T PLN03112        274 MDFVDVLLSLPGENGKEHMDDV-EIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRN---RMVQE  349 (514)
T ss_pred             chHHHHHHHhhccccccCCCHH-HHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCC---CcCCh
Confidence            68999998642      37788 999999999999999999 999999999999999999999999998643   46899


Q ss_pred             hhhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--
Q 039939          263 EDYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--  339 (411)
Q Consensus       263 ~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--  339 (411)
                      +++.+||||+|+|+|++|++|++++ ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++..  
T Consensus       350 ~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~  429 (514)
T PLN03112        350 SDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSR  429 (514)
T ss_pred             hhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCc
Confidence            9999999999999999999999997 6899999999999999999999999999999999999999999999876421  


Q ss_pred             -----CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC---ccc----cccccccCCceEEEEeCCC
Q 039939          340 -----VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY---PIA----YPYVEFRRGLLLEIERTNG  407 (411)
Q Consensus       340 -----~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~----~~~~~~~~~~~v~~~~r~~  407 (411)
                           .....++|||+|+|.|||++||++|+++++++|+++|+|++.++..   ...    ...+.+++++.+.+.+|.+
T Consensus       430 ~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        430 VEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             cccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCc
Confidence                 1245799999999999999999999999999999999999875431   111    1223456799999999965


Q ss_pred             C
Q 039939          408 F  408 (411)
Q Consensus       408 ~  408 (411)
                      .
T Consensus       510 ~  510 (514)
T PLN03112        510 P  510 (514)
T ss_pred             c
Confidence            3


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-62  Score=429.42  Aligned_cols=394  Identities=20%  Similarity=0.312  Sum_probs=317.8

Q ss_pred             CcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCc--cccccCChhHHhhhccc
Q 039939            3 WPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEK--YFQASYPKPMHGILGKL   80 (411)
Q Consensus         3 ~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~--~~~~~~~~~~~~~~g~~   80 (411)
                      +||+|++..|.+     +|.+|+++.++|||+||++.++|+.+.++.+|+....+++....  ++...+.......||..
T Consensus        40 iP~lG~a~~fgk-----~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg~~  114 (486)
T KOG0684|consen   40 IPWLGSALAFGK-----DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFGKG  114 (486)
T ss_pred             cchhhHHHHhcc-----CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcCCC
Confidence            799999999965     89999999999999999999999999999999999999987633  34334445566778743


Q ss_pred             cccccCChhHHHHHHHHHhhhCCCCchhh---hhHH------------------------HHHHHHHHHHcCCCCChhHH
Q 039939           81 SLLTVSGDLHKKLRNVAVSFIGASKSTPA---FLHS------------------------FTINLMVKHLLSIEPEEPIA  133 (411)
Q Consensus        81 ~l~~~~g~~~~~~R~~~~~~~~~~~l~~~---~~~~------------------------~~~~~~~~~~fG~~~~~~~~  133 (411)
                      .....++...-.+.+.+..+++..++++.   ++++                        +++.+.-.+++|+.... ..
T Consensus       115 v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~-~d  193 (486)
T KOG0684|consen  115 VVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLGGEVRDQ-LD  193 (486)
T ss_pred             ccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhhhhhhhh-hc
Confidence            34456677888888888888887777661   1111                        23333333344443322 22


Q ss_pred             HHHHHHHHHHHhhh----cccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHc--cC--CCCHH
Q 039939          134 FKILEDFQTFMKGF----VSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILK--KR--SLSEE  205 (411)
Q Consensus       134 ~~~~~~~~~~~~~~----~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~--~~--~~~~~  205 (411)
                      ......+.++...+    ..||.++|....++..++++.+.+.+.+++.++++.. ++...|+++.+++  ..  ..+++
T Consensus       194 ~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~-s~~~~dmlq~l~~~y~dg~~~te~  272 (486)
T KOG0684|consen  194 ADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASI-SKWDNDMLQSLMEKYKDGRPTTEE  272 (486)
T ss_pred             chHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcc-ccccHHHHHHHHHHhhcCCcCcHH
Confidence            23334444444333    4477788888888888999999999999999998775 2456688888887  21  56777


Q ss_pred             HHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCC
Q 039939          206 ETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNV  284 (411)
Q Consensus       206 ~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~  284 (411)
                       +++...+.+++||..|++ |.+|++++|++||++++.+++|+..+++.+.  ..++.+.++++|.|+.||+|||||+||
T Consensus       273 -e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~--~~l~~d~L~~lplL~~~IkEtLRL~~p  349 (486)
T KOG0684|consen  273 -EIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK--EKLTYDQLKDLPLLDSCIKETLRLHPP  349 (486)
T ss_pred             -HHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC--CCCCHHHHhcchHHHHHHHHHHhcCCc
Confidence             999999999999999999 9999999999999999999999999997652  459999999999999999999999999


Q ss_pred             CcccceeeccccccCC----EEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc-----CC--CCceeeccCCCC
Q 039939          285 VKFVHREAIRDVKFKE----YLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS-----VI--SKRVMPFGGGPR  353 (411)
Q Consensus       285 ~~~~~R~~~~d~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~-----~~--~~~~~~FG~G~r  353 (411)
                      .+.+.|.+.+|.++.+    |.||+|..|.++++.+||||++|+||+.|+|+||++++.     ..  ...++|||+|+|
T Consensus       350 ~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~  429 (486)
T KOG0684|consen  350 AHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRH  429 (486)
T ss_pred             hhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcC
Confidence            9999999999999966    999999999999999999999999999999999997762     11  234699999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc---cccccccCCceEEEEeCC
Q 039939          354 LCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA---YPYVEFRRGLLLEIERTN  406 (411)
Q Consensus       354 ~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~v~~~~r~  406 (411)
                      .|||+.||.+|+++++..+|+.|++++.++.-|..   ..++.|.++++++.+.|+
T Consensus       430 ~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  430 RCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence            99999999999999999999999999998643322   224566668999998875


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3e-61  Score=460.52  Aligned_cols=390  Identities=16%  Similarity=0.226  Sum_probs=301.5

Q ss_pred             cccchhhhhcccCCCCCchhHHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhcCCcccccc-CC-hhHHhhhccc
Q 039939            4 PICGETLAFLKPHKSNSTGSFLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQAS-YP-KPMHGILGKL   80 (411)
Q Consensus         4 P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~-~~-~~~~~~~g~~   80 (411)
                      ++.|+....+.     +..+++..+.++++ .+++++.++.  ++++||+.+++++..+...|... +. ..+...+| .
T Consensus        50 ~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-~  121 (502)
T PLN02426         50 YLTASWAKDFD-----NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-R  121 (502)
T ss_pred             CccHHHHHhcc-----cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-C
Confidence            45566555332     34556667777776 5777766554  89999999999998765455433 22 22345566 6


Q ss_pred             cccccCChhHHHHHHHHHhhhCCCCchhh------------h---------------------hHHHHHHHHHHHHcCCC
Q 039939           81 SLLTVSGDLHKKLRNVAVSFIGASKSTPA------------F---------------------LHSFTINLMVKHLLSIE  127 (411)
Q Consensus        81 ~l~~~~g~~~~~~R~~~~~~~~~~~l~~~------------~---------------------~~~~~~~~~~~~~fG~~  127 (411)
                      |+++.+|+.|+++||++++.|+.+++...            +                     +..+++++++.++||.+
T Consensus       122 gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        122 GIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             ceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999987655431            0                     00189999999999988


Q ss_pred             CChh----HHHHHHHHHHHHHh-----hhcccCc------cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCch
Q 039939          128 PEEP----IAFKILEDFQTFMK-----GFVSLPV------YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDF  192 (411)
Q Consensus       128 ~~~~----~~~~~~~~~~~~~~-----~~~~~p~------~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~  192 (411)
                      .+..    ...++.+.+..+..     ....+|+      +++....++..++.+.+.+++.++|+++++... ....|+
T Consensus       202 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~-~~~~dl  280 (502)
T PLN02426        202 PGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF-SASKDL  280 (502)
T ss_pred             CcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc-CCcchH
Confidence            6421    11233333333211     1111121      233333456677888899999999998876531 235799


Q ss_pred             HHHHHccCCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhH
Q 039939          193 LDVILKKRSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFT  271 (411)
Q Consensus       193 l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l  271 (411)
                      ++.+++.. .+++ ++.+++.++++||+|||+ +++|++++|++||++|+|+++|++++.+.+  ...++++++++||||
T Consensus       281 l~~ll~~~-~~~~-~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~--~~~~t~~~l~~LpYl  356 (502)
T PLN02426        281 LSRFMASI-NDDK-YLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN--QEAASFEEMKEMHYL  356 (502)
T ss_pred             HHHHHhcC-CCHH-HHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC--CCCCCHHHHhcChHH
Confidence            99999764 3566 999999999999999999 999999999999999999999999987643  246899999999999


Q ss_pred             HHHHHHhhcCCCCCcccceeecccccc-CCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCCCCc---cCCCCcee
Q 039939          272 NNVILEAMRCGNVVKFVHREAIRDVKF-KEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWTDKA---SVISKRVM  346 (411)
Q Consensus       272 ~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~---~~~~~~~~  346 (411)
                      +|||+|+||++|+++...|++.+|.++ +||.|||||.|.++.+++||||++| |||++|+||||++++   ...+..++
T Consensus       357 ~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~  436 (502)
T PLN02426        357 HAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYP  436 (502)
T ss_pred             HHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccC
Confidence            999999999999999988999999888 9999999999999999999999999 999999999999754   13456799


Q ss_pred             eccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC--cc--ccccccccCCceEEEEeCC
Q 039939          347 PFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY--PI--AYPYVEFRRGLLLEIERTN  406 (411)
Q Consensus       347 ~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~~v~~~~r~  406 (411)
                      |||+|+|.|+|+++|++|++++++.|+++|++++.++..  +.  ...++.+++++.|++++|.
T Consensus       437 pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        437 VFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            999999999999999999999999999999999864322  12  2234677889999999984


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.5e-57  Score=426.23  Aligned_cols=364  Identities=19%  Similarity=0.280  Sum_probs=269.9

Q ss_pred             CCCcccchhhhhcccCCCCCchhHHHHHhhhhcc-ccccccCCCCe-------EEecChhhhHHHHhc----CCcccccc
Q 039939            1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQ-VFKSHLFCSPA-------IVSCDHELNMFILQN----EEKYFQAS   68 (411)
Q Consensus         1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~-v~~~~~~~~~~-------vvv~~pe~~~~vl~~----~~~~~~~~   68 (411)
                      +|||+||++++|++.....++..|+++.++|||+ ||+++++|.++       |++++||+++.++.+    +...+...
T Consensus        23 ~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~  102 (480)
T PLN02648         23 YGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGT  102 (480)
T ss_pred             CCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceee
Confidence            3799999999988754456778999999999999 99999999665       999999999999975    44445556


Q ss_pred             CChhHHhhhccc---cccccCChhHHHHHHHHHhhhCCCCchhh--------------h---------------hHHHHH
Q 039939           69 YPKPMHGILGKL---SLLTVSGDLHKKLRNVAVSFIGASKSTPA--------------F---------------LHSFTI  116 (411)
Q Consensus        69 ~~~~~~~~~g~~---~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--------------~---------------~~~~~~  116 (411)
                      ++.... ++|++   +++..+|+.|+++|+++.+.|+. ++...              +               +..+++
T Consensus       103 ~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~~~lt~  180 (480)
T PLN02648        103 YMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLDQMAF  180 (480)
T ss_pred             eccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchHHHHHH
Confidence            666665 88866   77888999999999999999983 43320              1               011889


Q ss_pred             HHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcc---cCc---cCC------------CcccHHHHHHHHHHHHHHHHHHH
Q 039939          117 NLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVS---LPV---YIP------------GTHYANAVKARARLSRTVREIVR  178 (411)
Q Consensus       117 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~---~p~---~~p------------~~~~~~~~~~~~~~~~~~~~~i~  178 (411)
                      +++++++||.+.+..   .+.+.+..+...+..   +|.   .++            .... ...+..+.+.+.+.+.+ 
T Consensus       181 ~vi~~~lfG~~~~~~---~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~-  255 (480)
T PLN02648        181 NFLCKALTGKDPSET---ALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFF-LVKSDYDKLYDFFRASA-  255 (480)
T ss_pred             HHHHHHHcCCCcchh---hhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchh-hhhccHHHHHHHHHHHH-
Confidence            999999999876541   122222221111111   111   000            0000 00011112222222111 


Q ss_pred             HHHhhcccCCCCchHHHHHccCCCCHHHHHHHHHHH-HHhcchHHHH-HHHHHHHHHhhChH-HHHHHHHHHHHHhccCC
Q 039939          179 ERQHENMRAGEGDFLDVILKKRSLSEEETVSIVLDI-MLGGYETTAT-LLALIVYFLAHAPA-VFQKLKEEHRAIRKSKQ  255 (411)
Q Consensus       179 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~-~~~ag~~tt~-~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~~~  255 (411)
                                 .++++...+ .+++++ ++.++++. +..++++|++ +++|++++|++||+ +++++++|++.+.+.. 
T Consensus       256 -----------~~ll~~~~~-~~l~~~-ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~-  321 (480)
T PLN02648        256 -----------TEALDLAEK-FGISRE-EALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAG-  321 (480)
T ss_pred             -----------HHHHHHHHh-cCCCHH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccC-
Confidence                       122222222 258888 88888764 4456677777 99999999999995 9999999999998632 


Q ss_pred             CCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccC----CEEeCCCcEEecchhhhccCCCCCCCCCCCCC
Q 039939          256 DEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFK----EYLIPSGWKVLPVFTAAHFDLNLHENPSEFNP  331 (411)
Q Consensus       256 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~----g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P  331 (411)
                       +..++++++.+||||++||+|+||++|+++++.|++.+|++++    ||.||||+.|+++.+.+||||++|+||++|+|
T Consensus       322 -~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~P  400 (480)
T PLN02648        322 -GGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVP  400 (480)
T ss_pred             -CCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCC
Confidence             2468999999999999999999999999999889999999996    79999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCceeec---------cCCCCCCccHHHHHHHHHHHHHHHHHhCe-EEecCCCCc
Q 039939          332 SRWTDKASVISKRVMPF---------GGGPRLCPGAELAKVEISFFLHHLVLNYR-WKTQADDYP  386 (411)
Q Consensus       332 ~Rfl~~~~~~~~~~~~F---------G~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~  386 (411)
                      +||+++.......+++|         |+|+|.|||++||++|++++++.|+++|+ +++.++..+
T Consensus       401 eRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~~  465 (480)
T PLN02648        401 DRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTSG  465 (480)
T ss_pred             CCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCccc
Confidence            99997542222344444         66779999999999999999999999998 998765543


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=5.5e-53  Score=393.23  Aligned_cols=347  Identities=26%  Similarity=0.375  Sum_probs=277.5

Q ss_pred             hhHHHHHhhhhccccccccCCCC--eEEecChhhhHHHHhcCCccccccCC----h-hHHhhhccccccccCChhHHHHH
Q 039939           22 GSFLQQHCSIYGQVFKSHLFCSP--AIVSCDHELNMFILQNEEKYFQASYP----K-PMHGILGKLSLLTVSGDLHKKLR   94 (411)
Q Consensus        22 ~~~l~~~~~~yG~v~~~~~~~~~--~vvv~~pe~~~~vl~~~~~~~~~~~~----~-~~~~~~g~~~l~~~~g~~~~~~R   94 (411)
                      ..+...+.+.||.+++++..+..  ++++++++++++++.++. .++....    . .....+|..+++..||+.|+++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            34566778889999999887765  899999999999998764 2222211    1 14566665558899999999999


Q ss_pred             HHHHhhhCCCCchhhh--hH-----------------------HHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcc
Q 039939           95 NVAVSFIGASKSTPAF--LH-----------------------SFTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVS  149 (411)
Q Consensus        95 ~~~~~~~~~~~l~~~~--~~-----------------------~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  149 (411)
                      ++++++|+++.++...  +.                       .+++.+++ .+||.+.++  ..............  .
T Consensus       104 kl~~~~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~--~~~~~~~~~~~~~~--~  178 (411)
T COG2124         104 KLLAPAFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLED--RPQLLRWSDALLLR--L  178 (411)
T ss_pred             HHhccccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHH--HHHHHHHHHHHHhc--c
Confidence            9999999998776610  11                       07778888 888888764  11222222221111  1


Q ss_pred             cCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCHHHHHHHHHHHHHhcchHHHH
Q 039939          150 LPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSEEETVSIVLDIMLGGYETTAT  224 (411)
Q Consensus       150 ~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~~~~~~~~~~~~ag~~tt~  224 (411)
                      .|...+.....+..++...+.+++.++|++++..    ..+|+++.++...     .++++ |+.++++++++||+|||+
T Consensus       179 ~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~----~~~dlls~l~~a~~~~~~~lsd~-Ei~~~~~~ll~AGheTTa  253 (411)
T COG2124         179 DPDLGPEEPWRRARAARRELDAYLRALIAERRAA----PRDDLLSLLLSAEDDGGGRLSDD-EIRDELITLLVAGHETTA  253 (411)
T ss_pred             CcccCCcccHHHHHHHHHHHHHHHHHHHHHhccC----CcccHHHHHHHHhhCCCCcCCHH-HHHHHHHHHHHhhhHHHH
Confidence            1444444556778889999999999999999844    4889999998654     28999 999999999999999999


Q ss_pred             -HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEe
Q 039939          225 -LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLI  303 (411)
Q Consensus       225 -~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~i  303 (411)
                       +++|+++.|++||++++++++|.+.                   ||++++|+|+||++||++++.|.+++|++++|+.|
T Consensus       254 ~~l~~a~~~L~~~P~~~~~l~~e~~~-------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~I  314 (411)
T COG2124         254 NALAWALYALLRHPDQLAKLRAEPDR-------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRI  314 (411)
T ss_pred             HHHHHHHHHHHHCchHHHHHHhCcch-------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEe
Confidence             9999999999999999999998653                   78899999999999999998899999999999999


Q ss_pred             CCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCC
Q 039939          304 PSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQAD  383 (411)
Q Consensus       304 p~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  383 (411)
                      |||+.|+++++++||||++|+||++|+|+||.       ..++|||+|+|.|+|..||++|++++++.++++|++....+
T Consensus       315 p~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         315 PAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             CCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence            99999999999999999999999999999985       78999999999999999999999999999999999876554


Q ss_pred             C-CccccccccccCCceEEEEeC
Q 039939          384 D-YPIAYPYVEFRRGLLLEIERT  405 (411)
Q Consensus       384 ~-~~~~~~~~~~~~~~~v~~~~r  405 (411)
                      . ......+..+..+..+.++.+
T Consensus       388 ~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         388 PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCccccccccCCCcceeeeecC
Confidence            2 222334445555666666554


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=75.79  E-value=1.7  Score=27.85  Aligned_cols=9  Identities=44%  Similarity=1.092  Sum_probs=6.5

Q ss_pred             CCCCCCCCc
Q 039939          330 NPSRWTDKA  338 (411)
Q Consensus       330 ~P~Rfl~~~  338 (411)
                      ||||||+-.
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            788888644


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=62.38  E-value=24  Score=21.62  Aligned_cols=41  Identities=12%  Similarity=0.034  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHH
Q 039939          207 TVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEH  247 (411)
Q Consensus       207 ~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei  247 (411)
                      ++...+..++-.|.+-.+ .++--+....-||+..+.+-+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            566778888888888888 88888889999999998887775


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=46.12  E-value=22  Score=22.64  Aligned_cols=21  Identities=43%  Similarity=0.651  Sum_probs=17.0

Q ss_pred             HHHHHHhhChHHHHHHHHHHH
Q 039939          228 LIVYFLAHAPAVFQKLKEEHR  248 (411)
Q Consensus       228 ~~l~~L~~~p~~~~~l~~Ei~  248 (411)
                      -++.+|..||++.+++.+.=.
T Consensus         4 ~iV~YLv~nPevl~kl~~g~a   24 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEA   24 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCe
Confidence            467899999999999976533


No 36 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=43.99  E-value=10  Score=23.66  Aligned_cols=10  Identities=50%  Similarity=1.046  Sum_probs=8.7

Q ss_pred             eeccCCCCCC
Q 039939          346 MPFGGGPRLC  355 (411)
Q Consensus       346 ~~FG~G~r~C  355 (411)
                      .+||.|.|.|
T Consensus        12 ~kfg~GsrsC   21 (56)
T KOG3506|consen   12 RKFGQGSRSC   21 (56)
T ss_pred             cccCCCCcce
Confidence            4799999988


No 37 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=41.10  E-value=22  Score=29.57  Aligned_cols=44  Identities=16%  Similarity=0.160  Sum_probs=31.9

Q ss_pred             cChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEec
Q 039939          267 QMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLP  311 (411)
Q Consensus       267 ~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  311 (411)
                      .-..+.|||.|+.-+.. ...+.=+..+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~-Gs~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVD-GSRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeC-CCEEEEEEcCceEECCEEeCCCCEEEE
Confidence            45567788998876642 222333567899999999999998875


No 38 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=33.98  E-value=55  Score=20.32  Aligned_cols=34  Identities=18%  Similarity=0.129  Sum_probs=22.9

Q ss_pred             HHHhhhhccccccccCCCC----eEEecChhhhHHHHh
Q 039939           26 QQHCSIYGQVFKSHLFCSP----AIVSCDHELNMFILQ   59 (411)
Q Consensus        26 ~~~~~~yG~v~~~~~~~~~----~vvv~~pe~~~~vl~   59 (411)
                      .++..+||+|-.+.+....    +|-..+.+.++.+..
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            4677899999888775432    344478888877765


No 39 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=30.53  E-value=2.3e+02  Score=21.18  Aligned_cols=70  Identities=14%  Similarity=0.199  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHHHHhhcccC---CCCchHHHHHccC-------------CCCHHHHHHHHHHHHHhcchHHHH---HHHH
Q 039939          168 RLSRTVREIVRERQHENMRA---GEGDFLDVILKKR-------------SLSEEETVSIVLDIMLGGYETTAT---LLAL  228 (411)
Q Consensus       168 ~~~~~~~~~i~~~~~~~~~~---~~~d~l~~ll~~~-------------~~~~~~~~~~~~~~~~~ag~~tt~---~l~~  228 (411)
                      .+.+-+..++++|++.+...   +-.++.+.|++-+             +++.. +-...++....-...|++   -+..
T Consensus         4 ~v~e~I~~iVe~RrqEGA~~~Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~-eFnK~lLE~v~kt~~~~~~IL~~~~   82 (118)
T PRK13713          4 EVYEKINAIVEERRQEGAREKDVSFSSVASMLLELGLRVYEAQMERKESGFNQT-EFNKLLLECVVKTQSTVAKILGIES   82 (118)
T ss_pred             HHHHHHHHHHHHHHHcCCCccCccHHHHHHHHHHHhHHHHHHHHHhhcCcccHH-HHHHHHHHHHHHHHHHHHHHHcccc
Confidence            45566788888888876222   2234566666543             46655 666666666666666665   2334


Q ss_pred             HHHHHhhChH
Q 039939          229 IVYFLAHAPA  238 (411)
Q Consensus       229 ~l~~L~~~p~  238 (411)
                      ...++..+|.
T Consensus        83 lsp~v~~~~~   92 (118)
T PRK13713         83 LSPHVSGNPK   92 (118)
T ss_pred             ccHhhcCCCc
Confidence            4456666654


No 40 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=29.26  E-value=70  Score=18.91  Aligned_cols=19  Identities=16%  Similarity=0.008  Sum_probs=15.1

Q ss_pred             HHHHHHHhhChHHHHHHHH
Q 039939          227 ALIVYFLAHAPAVFQKLKE  245 (411)
Q Consensus       227 ~~~l~~L~~~p~~~~~l~~  245 (411)
                      .|-+..++++|++|.-+.-
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4667888999999987753


No 41 
>PHA03162 hypothetical protein; Provisional
Probab=29.02  E-value=34  Score=25.89  Aligned_cols=24  Identities=25%  Similarity=0.540  Sum_probs=20.7

Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHH
Q 039939          349 GGGPRLCPGAELAKVEISFFLHHL  372 (411)
Q Consensus       349 G~G~r~C~G~~la~~~~~~~l~~l  372 (411)
                      ++|.+.|||+...+-++..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999999999988877766


No 42 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=28.85  E-value=55  Score=25.17  Aligned_cols=22  Identities=27%  Similarity=0.674  Sum_probs=16.7

Q ss_pred             CCccHHHHHHHHHHHHHHHHHh
Q 039939          354 LCPGAELAKVEISFFLHHLVLN  375 (411)
Q Consensus       354 ~C~G~~la~~~~~~~l~~ll~~  375 (411)
                      .|.|+.||...+-.++..|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999975


No 43 
>PRK06789 flagellar motor switch protein; Validated
Probab=28.37  E-value=64  Score=21.95  Aligned_cols=41  Identities=7%  Similarity=0.014  Sum_probs=30.5

Q ss_pred             HHHHHhhcCCCCCcc-cceeeccc--cccCCEEeCCCcEEecch
Q 039939          273 NVILEAMRCGNVVKF-VHREAIRD--VKFKEYLIPSGWKVLPVF  313 (411)
Q Consensus       273 a~i~E~lRl~p~~~~-~~R~~~~d--~~l~g~~ip~G~~v~~~~  313 (411)
                      --++|.+.+.+.+.. +-|.+.++  +.++|..|.+|..|.++-
T Consensus        20 ~~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         20 KKIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             eEHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            347888999876664 55666664  555899999999998763


No 44 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.71  E-value=36  Score=28.46  Aligned_cols=21  Identities=19%  Similarity=0.365  Sum_probs=18.2

Q ss_pred             hhhhccCCCCCCCCCCCCCCC
Q 039939          313 FTAAHFDLNLHENPSEFNPSR  333 (411)
Q Consensus       313 ~~~~~~d~~~~~dp~~F~P~R  333 (411)
                      .+..|.|+.+|.|+..|+|.|
T Consensus       191 W~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  191 WWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCcccccCccccCCCC
Confidence            344599999999999999988


No 45 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=25.25  E-value=62  Score=24.72  Aligned_cols=41  Identities=20%  Similarity=0.121  Sum_probs=30.6

Q ss_pred             CchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCC
Q 039939           20 STGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEE   62 (411)
Q Consensus        20 ~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~   62 (411)
                      +....+++|.++||.+--.  .+...+...|++.++++...+.
T Consensus        75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhChh
Confidence            3456789999999987432  1456777889999999987653


No 46 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=24.98  E-value=2.9e+02  Score=20.37  Aligned_cols=76  Identities=16%  Similarity=0.165  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHhhcccCCCCchHHHHHccC-CCCHHHHHHHHHHHHHhcc----hH----HHH-HHHHHHHHHhhChHH
Q 039939          170 SRTVREIVRERQHENMRAGEGDFLDVILKKR-SLSEEETVSIVLDIMLGGY----ET----TAT-LLALIVYFLAHAPAV  239 (411)
Q Consensus       170 ~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~~~~~~ag----~~----tt~-~l~~~l~~L~~~p~~  239 (411)
                      ..-+.+.|.+|+...   ...++...|++.+ +.-.. -+......++.|.    .+    -++ .+.+++..|..+---
T Consensus         5 l~~L~~~I~~Rk~~~---~~~SYT~~L~~~G~~ki~k-KlgEEa~E~i~A~~~~d~~~~i~E~ADLlYHllVlL~~~gv~   80 (105)
T PRK00400          5 LERLAATIEERKGAD---PEGSYTAKLLDKGLDKILK-KVGEEATEVVIAAKDGDREELVYEIADLLYHLLVLLAARGIS   80 (105)
T ss_pred             HHHHHHHHHHHHhCC---CCCcHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            345566677776443   4678888888764 11111 2333333333332    22    234 777777777776445


Q ss_pred             HHHHHHHHHH
Q 039939          240 FQKLKEEHRA  249 (411)
Q Consensus       240 ~~~l~~Ei~~  249 (411)
                      .+.+.+|+..
T Consensus        81 ~~dV~~eL~~   90 (105)
T PRK00400         81 LEDVLAELER   90 (105)
T ss_pred             HHHHHHHHHH
Confidence            5566666554


No 47 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.05  E-value=68  Score=18.54  Aligned_cols=21  Identities=19%  Similarity=0.354  Sum_probs=13.1

Q ss_pred             HHHHHHHHHh-hChHHHHHHHH
Q 039939          225 LLALIVYFLA-HAPAVFQKLKE  245 (411)
Q Consensus       225 ~l~~~l~~L~-~~p~~~~~l~~  245 (411)
                      ++-..+..++ +||++++.++.
T Consensus        14 qL~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   14 QLQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHHhChhHHHHHHh
Confidence            3444444555 79998877754


No 48 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=22.48  E-value=71  Score=17.52  Aligned_cols=16  Identities=25%  Similarity=0.642  Sum_probs=13.4

Q ss_pred             CCCceeeccCCCCCCc
Q 039939          341 ISKRVMPFGGGPRLCP  356 (411)
Q Consensus       341 ~~~~~~~FG~G~r~C~  356 (411)
                      ....|+++.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4578999999899995


No 49 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=22.08  E-value=1.9e+02  Score=20.60  Aligned_cols=34  Identities=15%  Similarity=0.052  Sum_probs=26.3

Q ss_pred             cchHHHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 039939          218 GYETTATLLALIVYFLAHAPAVFQKLKEEHRAIR  251 (411)
Q Consensus       218 ag~~tt~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  251 (411)
                      -|.-...++.|-++..-.-|+..+.+++||+++-
T Consensus        48 fG~Ysl~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   48 FGCYSLFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            3444444788888888778999999999999874


No 50 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=21.82  E-value=80  Score=24.71  Aligned_cols=38  Identities=11%  Similarity=0.122  Sum_probs=28.0

Q ss_pred             hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhc
Q 039939           23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQN   60 (411)
Q Consensus        23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~   60 (411)
                      +-|.++.++||+|..+.+.         +.-+|-..+++.++.++..
T Consensus        49 ~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         49 ASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             HHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            4578888999998777653         2245666889999998864


No 51 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=21.50  E-value=1.8e+02  Score=26.22  Aligned_cols=68  Identities=15%  Similarity=0.098  Sum_probs=44.9

Q ss_pred             HHHHHHhhcCCCCCcc----cceeecccccc----CCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCC
Q 039939          272 NNVILEAMRCGNVVKF----VHREAIRDVKF----KEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISK  343 (411)
Q Consensus       272 ~a~i~E~lRl~p~~~~----~~R~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~  343 (411)
                      +.+++.+..+.||...    +--..+.|..+    -.-+|..||.|.++-                           ++.
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~G---------------------------spY  328 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMGG---------------------------SPY  328 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccCC---------------------------Ccc
Confidence            4678888888887553    22344555444    246777888776552                           556


Q ss_pred             ceeeccCCCCCCccHHHHHHHHHHHH
Q 039939          344 RVMPFGGGPRLCPGAELAKVEISFFL  369 (411)
Q Consensus       344 ~~~~FG~G~r~C~G~~la~~~~~~~l  369 (411)
                      +++-||.+  +-.|+++|. |++..+
T Consensus       329 s~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         329 SNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             hhhhcCCC--cchhhHHHH-HHHHHH
Confidence            66677665  778999998 666654


No 52 
>PF06522 B12D:  NADH-ubiquinone reductase complex 1 MLRQ subunit;  InterPro: IPR010530 The MLRQ subunit of mitochondrial NADH-ubiquinone reductase complex I is nuclear [] and is found in plants [], insects, fungi and higher metazoans []. It appears to act within the membrane and, in mammals, is highly expressed in muscle and neural tissue, indicative of a role in ATP generation [].
Probab=21.14  E-value=78  Score=21.41  Aligned_cols=22  Identities=14%  Similarity=0.016  Sum_probs=14.7

Q ss_pred             chHHHHHHHHHHHHHhhChHHH
Q 039939          219 YETTATLLALIVYFLAHAPAVF  240 (411)
Q Consensus       219 g~~tt~~l~~~l~~L~~~p~~~  240 (411)
                      |...+.+..++...|+.+|++.
T Consensus        14 g~a~~~a~~~~~r~l~~~PdV~   35 (73)
T PF06522_consen   14 GVAVGGATFYLYRLLLTNPDVR   35 (73)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeE
Confidence            3334446677777788999854


No 53 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=20.38  E-value=71  Score=24.23  Aligned_cols=22  Identities=27%  Similarity=0.202  Sum_probs=18.5

Q ss_pred             eeeccccccCCEEeCCCcEEec
Q 039939          290 REAIRDVKFKEYLIPSGWKVLP  311 (411)
Q Consensus       290 R~~~~d~~l~g~~ip~G~~v~~  311 (411)
                      -+++.|.++.|-.||+|+.|+.
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            4566799999999999999853


No 54 
>PF02663 FmdE:  FmdE, Molybdenum formylmethanofuran dehydrogenase operon ;  InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].  This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=20.00  E-value=92  Score=23.85  Aligned_cols=22  Identities=32%  Similarity=0.575  Sum_probs=17.5

Q ss_pred             CCCccHHHHHHHHHHHHHHHHH
Q 039939          353 RLCPGAELAKVEISFFLHHLVL  374 (411)
Q Consensus       353 r~C~G~~la~~~~~~~l~~ll~  374 (411)
                      |.|||.-++..+....+..|-.
T Consensus         5 H~Cpgl~~G~r~~~~a~~~l~~   26 (131)
T PF02663_consen    5 HLCPGLALGYRMAKYALEELGI   26 (131)
T ss_dssp             S--HHHHHHHHHHHHHHHHHTS
T ss_pred             CcCccHHHHHHHHHHHHHHcCC
Confidence            8999999999999998888744


Done!