Query 039939
Match_columns 411
No_of_seqs 176 out of 2030
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 05:05:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039939.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039939hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ld6_A Lanosterol 14-alpha dem 100.0 9.1E-74 3.1E-78 546.6 30.6 400 2-411 19-459 (461)
2 3k9v_A 1,25-dihydroxyvitamin D 100.0 5.8E-70 2E-74 523.7 36.0 400 1-405 30-482 (482)
3 2ve3_A Putative cytochrome P45 100.0 2.5E-70 8.7E-75 520.0 32.4 391 1-406 18-444 (444)
4 3tbg_A Cytochrome P450 2D6; mo 100.0 6.9E-70 2.4E-74 522.8 34.9 399 1-407 16-477 (479)
5 3swz_A Steroid 17-alpha-hydrox 100.0 2.2E-69 7.7E-74 521.0 35.1 401 2-409 15-482 (494)
6 2fdv_A Cytochrome P450 2A6; CY 100.0 2.2E-68 7.4E-73 511.5 37.0 397 2-407 17-474 (476)
7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 3.5E-68 1.2E-72 510.5 38.3 397 1-407 16-473 (476)
8 3nxu_A Cytochrome P450 3A4; al 100.0 3.4E-69 1.1E-73 518.7 28.1 394 1-407 20-476 (485)
9 3pm0_A Cypib1, cytochrome P450 100.0 4E-68 1.4E-72 514.1 34.4 401 1-410 15-488 (507)
10 1r9o_A Cytochrome P450 2C9; mo 100.0 1.1E-67 3.8E-72 506.8 36.4 397 2-407 18-475 (477)
11 1po5_A Cytochrome P450 2B4; ox 100.0 6.2E-68 2.1E-72 508.3 34.6 397 2-407 17-474 (476)
12 3czh_A Cytochrome P450 2R1; vi 100.0 2.2E-67 7.7E-72 504.8 38.1 404 2-411 19-481 (481)
13 2cib_A Cytochrome P450 51; hem 100.0 1.8E-68 6.3E-73 508.8 28.9 398 2-411 12-454 (455)
14 3n9y_A Cholesterol SIDE-chain 100.0 1.6E-67 5.5E-72 507.3 32.0 398 7-409 20-478 (487)
15 2hi4_A Cytochrome P450 1A2; CY 100.0 2.8E-67 9.5E-72 506.1 32.8 400 2-411 23-493 (495)
16 3dbg_A Putative cytochrome P45 100.0 1.1E-67 3.9E-72 505.3 29.6 394 1-408 29-464 (467)
17 3i3k_A Lanosterol 14-alpha dem 100.0 4.5E-67 1.5E-71 500.6 30.2 389 2-401 19-450 (461)
18 3s79_A Cytochrome P450 19A1; o 100.0 2.9E-66 9.7E-71 500.6 34.5 396 1-409 51-499 (503)
19 3mdm_A Cholesterol 24-hydroxyl 100.0 3.6E-66 1.2E-70 493.7 32.9 387 19-409 10-445 (456)
20 3qz1_A Steroid 21-hydroxylase; 100.0 4.6E-66 1.6E-70 498.3 33.2 386 18-408 42-486 (496)
21 3gw9_A Sterol 14alpha-demethyl 100.0 7.3E-66 2.5E-70 490.9 32.9 388 2-406 11-450 (450)
22 2ij2_A Cytochrome P450 BM3; mo 100.0 2E-65 6.7E-70 489.8 31.4 391 2-407 10-453 (470)
23 3v8d_A Cholesterol 7-alpha-mon 100.0 8.4E-64 2.9E-68 481.6 25.7 394 3-408 22-488 (491)
24 3dax_A Cytochrome P450 7A1; ch 100.0 2.5E-63 8.6E-68 478.6 25.6 394 3-409 22-489 (491)
25 1izo_A P450bsbeta, cytochrome 100.0 1.2E-61 4.2E-66 456.6 30.4 371 1-407 6-417 (417)
26 3awm_A Fatty acid alpha-hydrox 100.0 1.4E-60 4.9E-65 449.1 29.1 370 1-407 5-415 (415)
27 1n97_A CYP175A1; electron tran 100.0 6E-62 2.1E-66 454.2 18.7 350 2-405 6-386 (389)
28 3b6h_A Prostacyclin synthase; 100.0 1E-60 3.5E-65 461.1 27.9 390 3-409 27-493 (498)
29 3b98_A Prostaglandin I2 syntha 100.0 4.5E-61 1.5E-65 460.9 24.3 380 3-408 27-473 (475)
30 3ejb_B Biotin biosynthesis cyt 100.0 2.6E-59 9E-64 438.9 30.6 349 19-409 13-400 (404)
31 2cd8_A Cytochrome P450 monooxy 100.0 2.7E-59 9.4E-64 442.0 28.5 352 1-406 32-429 (436)
32 3nc3_A Cytochrome P450 CYPX; c 100.0 1.8E-59 6.1E-64 443.6 23.6 350 18-404 52-440 (441)
33 4fb2_A P450CIN; heme, monooxyg 100.0 1.6E-58 5.6E-63 432.3 29.8 342 16-406 16-394 (398)
34 3a4g_A Vitamin D hydroxylase; 100.0 2.4E-58 8.1E-63 432.3 29.8 344 18-411 19-407 (411)
35 1q5d_A P450 epoxidase; cytochr 100.0 1.7E-58 5.9E-63 434.7 28.4 349 16-407 23-418 (419)
36 2xkr_A CYP142, putative cytoch 100.0 6.3E-58 2.2E-62 428.3 30.3 343 19-406 18-395 (398)
37 2uuq_A CYP130, cytochrome P450 100.0 1E-58 3.5E-63 435.1 24.4 356 5-406 11-414 (414)
38 3r9b_A Cytochrome P450 164A2; 100.0 4.6E-58 1.6E-62 432.3 27.8 360 6-406 16-418 (418)
39 2z3t_A Cytochrome P450; monoxy 100.0 2.6E-58 8.9E-63 433.9 25.8 345 20-406 21-417 (425)
40 1cpt_A Cytochrome P450-TERP; o 100.0 6.6E-58 2.3E-62 432.1 28.6 362 5-405 11-428 (428)
41 3mgx_A Putative P450 monooxyge 100.0 5E-58 1.7E-62 430.1 27.3 343 19-405 37-415 (415)
42 3buj_A CALO2; heme, iron, meta 100.0 1.7E-57 5.7E-62 425.3 30.5 339 20-405 14-396 (397)
43 2dkk_A Cytochrome P450; CYP158 100.0 2.1E-57 7.1E-62 425.6 28.0 339 19-406 27-411 (411)
44 3aba_A Cytochrome P450; oxidor 100.0 2.7E-57 9.3E-62 424.4 28.7 341 18-406 18-403 (403)
45 2zwu_A Camphor 5-monooxygenase 100.0 2.7E-57 9.1E-62 425.4 28.1 339 18-407 36-412 (415)
46 1jfb_A Nitric-oxide reductase 100.0 6.5E-57 2.2E-61 422.6 29.8 331 2-383 8-382 (404)
47 2jjn_A Cytochrome P450 113A1; 100.0 1.6E-57 5.6E-62 427.2 25.4 347 19-406 28-407 (411)
48 3ivy_A Cytochrome P450 CYP125; 100.0 5E-58 1.7E-62 433.2 22.0 359 3-407 19-430 (433)
49 1z8o_A 6-deoxyerythronolide B 100.0 5.3E-57 1.8E-61 422.7 28.7 337 18-402 13-402 (404)
50 3lxh_A Cytochrome P450; heme, 100.0 3.9E-57 1.3E-61 425.9 27.8 347 17-406 36-418 (421)
51 2wm5_A CYP124, putative cytoch 100.0 9.4E-57 3.2E-61 424.3 30.1 342 20-402 45-434 (435)
52 3rwl_A Cytochrome P450 alkane 100.0 1.7E-56 5.8E-61 421.4 31.7 344 19-404 38-426 (426)
53 1ued_A P450 OXYC, P450 monooxy 100.0 6.2E-57 2.1E-61 422.4 27.8 335 19-402 24-406 (406)
54 3tkt_A Cytochrome P450; aromat 100.0 4.9E-57 1.7E-61 428.3 27.1 346 21-404 47-449 (450)
55 3oft_A Cytochrome P450, CYP101 100.0 8.4E-57 2.9E-61 420.7 28.3 339 16-403 21-395 (396)
56 2y5n_A MYCG, P-450-like protei 100.0 3E-56 1E-60 418.6 31.7 338 18-402 36-417 (417)
57 2xbk_A PIMD protein; epoxidati 100.0 2.4E-56 8.1E-61 417.2 29.5 335 18-402 25-404 (404)
58 1gwi_A CYP154C1, cytochrome P4 100.0 8.4E-57 2.9E-61 422.0 25.4 341 19-406 17-410 (411)
59 1s1f_A Putative cytochrome P45 100.0 1.1E-56 3.7E-61 420.8 26.0 335 19-402 24-404 (406)
60 2zbx_A Cytochrome P450-SU1; be 100.0 6.1E-56 2.1E-60 416.4 30.5 337 18-403 23-407 (412)
61 3dsk_A Cytochrome P450 74A, ch 100.0 5.2E-57 1.8E-61 434.9 23.7 360 1-382 34-471 (495)
62 1odo_A Putative cytochrome P45 100.0 3.5E-56 1.2E-60 417.7 27.8 338 19-404 15-407 (408)
63 2z36_A MOXA, cytochrome P450 t 100.0 7E-56 2.4E-60 415.8 29.6 336 18-404 21-409 (413)
64 3abb_A CYP105D6, cytochrome P4 100.0 8.7E-57 3E-61 421.8 22.7 339 18-406 23-408 (408)
65 3b4x_A 367AA long hypothetical 100.0 2.9E-55 9.8E-60 405.4 29.6 330 21-404 1-366 (367)
66 3tyw_A Putative cytochrome P45 100.0 1.9E-55 6.6E-60 413.9 28.5 318 18-383 28-389 (417)
67 1n40_A P450 MT2, cytochrome P4 100.0 6.5E-55 2.2E-59 407.3 27.9 332 18-402 15-396 (396)
68 2wiy_A XPLA-heme, cytochrome P 100.0 6.9E-55 2.4E-59 406.7 27.7 340 20-402 21-393 (394)
69 1lfk_A OXYB, P450 monooxygenas 100.0 2.3E-55 7.8E-60 410.9 24.3 332 22-401 16-397 (398)
70 3dan_A Cytochrome P450 74A2; A 100.0 1.2E-55 4.2E-60 422.9 23.0 357 1-382 15-453 (473)
71 3oo3_A OXY protein; cytochrome 100.0 2.2E-54 7.4E-59 402.8 29.7 332 19-402 12-384 (384)
72 3p3o_A Cytochrome P450; monoox 100.0 1E-54 3.4E-59 408.5 27.2 343 18-404 32-415 (416)
73 1io7_A Cytochrome P450 CYP119; 100.0 2.4E-54 8.1E-59 399.8 28.2 329 21-406 1-368 (368)
74 4dnj_A Putative cytochrome P45 100.0 8.7E-53 3E-57 394.4 28.2 348 2-404 19-411 (412)
75 2rfb_A Cytochrome P450; heme, 100.0 3.6E-53 1.2E-57 388.0 22.9 291 30-383 2-324 (343)
76 4dxy_A Cytochrome P450, CYP101 100.0 1.6E-48 5.5E-53 364.8 25.4 342 18-402 36-413 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.6E-46 5.5E-51 344.0 11.6 306 2-401 42-380 (381)
78 1iqt_A AUF1, heterogeneous nuc 62.7 11 0.00039 24.1 4.4 40 23-62 14-62 (75)
79 1s79_A Lupus LA protein; RRM, 54.4 12 0.0004 26.3 3.5 43 23-65 26-76 (103)
80 2mss_A Protein (musashi1); RNA 50.0 16 0.00054 23.4 3.4 40 23-62 14-62 (75)
81 2krb_A Eukaryotic translation 45.3 17 0.00059 23.7 3.1 38 23-60 22-66 (81)
82 2dnm_A SRP46 splicing factor; 43.4 22 0.00074 24.6 3.5 38 23-60 28-74 (103)
83 3d2w_A TAR DNA-binding protein 43.1 18 0.0006 24.4 2.8 36 23-58 26-65 (89)
84 1x4c_A Splicing factor, argini 40.7 17 0.00059 25.5 2.6 39 22-60 29-69 (108)
85 3beg_B Splicing factor, argini 40.5 18 0.00063 25.7 2.7 38 23-60 31-70 (115)
86 1wf0_A TDP-43, TAR DNA-binding 39.9 21 0.0007 23.8 2.8 37 23-59 20-60 (88)
87 1sjq_A Polypyrimidine tract-bi 39.4 19 0.00066 25.4 2.6 37 23-59 31-70 (105)
88 2dgu_A Heterogeneous nuclear r 39.1 27 0.00093 24.1 3.4 38 23-60 26-64 (103)
89 2wbr_A GW182, gawky, LD47780P; 38.5 24 0.00082 24.0 2.8 37 23-59 22-61 (89)
90 2kvi_A Nuclear polyadenylated 38.5 24 0.00082 24.0 3.0 38 23-60 26-64 (96)
91 4f25_A Polyadenylate-binding p 38.1 16 0.00055 26.1 2.1 38 23-60 20-64 (115)
92 1nu4_A U1A RNA binding domain; 37.4 36 0.0012 23.0 3.8 36 25-60 29-70 (97)
93 2cph_A RNA binding motif prote 36.6 41 0.0014 23.2 4.1 38 23-60 30-77 (107)
94 3ex7_B RNA-binding protein 8A; 36.4 33 0.0011 24.7 3.6 37 23-59 37-82 (126)
95 3s7r_A Heterogeneous nuclear r 35.8 20 0.00069 23.7 2.2 40 23-62 26-74 (87)
96 2diu_A KIAA0430 protein; struc 35.6 34 0.0011 23.7 3.2 36 24-60 29-65 (96)
97 2dnp_A RNA-binding protein 14; 35.6 35 0.0012 22.7 3.4 38 23-60 24-62 (90)
98 2cq4_A RNA binding motif prote 35.2 36 0.0012 24.0 3.6 40 23-62 40-88 (114)
99 4fxv_A ELAV-like protein 1; RN 35.1 28 0.00094 24.0 2.9 38 23-60 34-80 (99)
100 2xnq_A Nuclear polyadenylated 34.7 29 0.001 23.7 2.9 38 23-60 38-76 (97)
101 1oo0_B CG8781-PA, drosophila Y 34.6 33 0.0011 24.0 3.3 37 23-59 41-86 (110)
102 2dgx_A KIAA0430 protein; RRM d 34.5 37 0.0013 23.0 3.5 34 26-59 31-70 (96)
103 1whx_A Hypothetical protein ri 34.3 39 0.0013 23.8 3.6 39 22-60 24-65 (111)
104 1x4d_A Matrin 3; structural ge 34.3 21 0.00073 24.9 2.1 37 23-59 31-70 (102)
105 3ns6_A Eukaryotic translation 34.2 24 0.00084 24.3 2.5 37 23-59 27-72 (100)
106 3mdf_A Peptidyl-prolyl CIS-tra 34.0 36 0.0012 22.2 3.3 37 23-59 22-67 (85)
107 1whw_A Hypothetical protein ri 33.9 49 0.0017 22.4 4.1 38 23-60 23-69 (99)
108 2cq3_A RNA-binding protein 9; 33.5 32 0.0011 23.6 3.1 38 23-60 30-74 (103)
109 2x1f_A MRNA 3'-END-processing 33.2 35 0.0012 23.1 3.1 37 23-59 17-62 (96)
110 2jvr_A Nucleolar protein 3; RN 32.8 40 0.0014 23.9 3.4 38 23-60 43-86 (111)
111 2ad9_A Polypyrimidine tract-bi 32.8 25 0.00085 25.5 2.3 37 23-59 46-85 (119)
112 2dgt_A RNA-binding protein 30; 32.6 33 0.0011 23.0 2.9 38 23-60 25-63 (92)
113 1wex_A Hypothetical protein (r 32.4 26 0.00088 24.5 2.3 37 23-59 30-69 (104)
114 1x5u_A Splicing factor 3B subu 31.9 41 0.0014 23.1 3.4 38 23-60 30-76 (105)
115 2cq1_A PTB-like protein L; RRM 31.8 23 0.0008 24.6 2.0 37 23-59 30-69 (101)
116 2rs2_A Musashi-1, RNA-binding 31.5 53 0.0018 22.9 3.9 39 23-61 40-87 (109)
117 2dnq_A RNA-binding protein 4B; 31.4 33 0.0011 22.8 2.7 37 23-59 23-60 (90)
118 2err_A Ataxin-2-binding protei 31.3 34 0.0012 23.9 2.9 37 23-59 44-87 (109)
119 2dnh_A Bruno-like 5, RNA bindi 31.1 24 0.00082 24.4 2.0 37 23-59 30-74 (105)
120 2dgs_A DAZ-associated protein 30.4 36 0.0012 23.1 2.9 39 23-61 25-72 (99)
121 2div_A TRNA selenocysteine ass 30.2 38 0.0013 23.0 3.0 38 23-60 24-71 (99)
122 3s8s_A Histone-lysine N-methyl 30.0 24 0.00082 25.0 1.8 39 22-60 20-67 (110)
123 1uaw_A Mouse-musashi-1; RNP-ty 29.9 50 0.0017 20.9 3.4 39 23-61 15-62 (77)
124 1p27_B RNA-binding protein 8A; 29.8 28 0.00097 24.1 2.2 38 23-60 38-84 (106)
125 2e5h_A Zinc finger CCHC-type a 29.7 44 0.0015 22.3 3.2 37 23-59 31-76 (94)
126 2fy1_A RNA-binding motif prote 29.6 45 0.0015 23.7 3.3 38 23-60 22-67 (116)
127 2ytc_A PRE-mRNA-splicing facto 29.5 38 0.0013 22.1 2.8 38 23-60 27-67 (85)
128 3ucg_A Polyadenylate-binding p 29.4 53 0.0018 21.6 3.5 43 23-65 21-72 (89)
129 2hvz_A Splicing factor, argini 29.3 35 0.0012 23.3 2.6 37 23-59 15-55 (101)
130 1m46_B IQ4, IQ4 motif from MYO 29.3 46 0.0016 15.7 2.1 12 238-249 8-19 (26)
131 1x4h_A RNA-binding protein 28; 29.1 43 0.0015 23.3 3.1 38 23-60 30-76 (111)
132 2cqb_A Peptidyl-prolyl CIS-tra 29.1 30 0.001 23.7 2.2 37 23-59 27-72 (102)
133 2do4_A Squamous cell carcinoma 28.8 28 0.00095 23.8 2.0 38 23-60 32-77 (100)
134 2cpf_A RNA binding motif prote 28.8 29 0.001 23.5 2.1 38 23-60 20-69 (98)
135 3lqv_A PRE-mRNA branch site pr 28.8 50 0.0017 23.2 3.5 37 23-59 23-65 (115)
136 1why_A Hypothetical protein ri 28.4 50 0.0017 22.3 3.3 37 23-59 32-71 (97)
137 2cpz_A CUG triplet repeat RNA- 28.0 38 0.0013 23.8 2.7 38 23-60 40-86 (115)
138 2cqi_A Nucleolysin TIAR; RNA r 27.9 38 0.0013 23.3 2.6 37 23-59 30-73 (103)
139 2dgv_A HnRNP M, heterogeneous 27.9 32 0.0011 22.9 2.2 38 23-60 23-67 (92)
140 2cqd_A RNA-binding region cont 27.8 61 0.0021 22.7 3.8 40 23-62 32-80 (116)
141 2cpj_A Non-POU domain-containi 27.8 30 0.001 23.6 2.0 38 23-60 30-70 (99)
142 2dis_A Unnamed protein product 27.4 49 0.0017 22.9 3.2 38 23-60 23-71 (109)
143 1x4b_A Heterogeneous nuclear r 27.4 40 0.0014 23.8 2.7 39 23-61 42-89 (116)
144 2jvo_A Nucleolar protein 3; nu 27.3 43 0.0015 23.4 2.8 38 23-60 46-84 (108)
145 2dh8_A DAZ-associated protein 27.3 44 0.0015 23.0 2.9 40 23-62 31-79 (105)
146 3v4m_A Splicing factor U2AF 65 27.2 45 0.0016 23.3 2.9 45 23-67 30-86 (105)
147 2d9p_A Polyadenylate-binding p 27.1 25 0.00085 24.2 1.5 38 23-60 30-74 (103)
148 2ywk_A Putative RNA-binding pr 27.1 35 0.0012 22.9 2.3 37 23-59 31-75 (95)
149 3bs9_A Nucleolysin TIA-1 isofo 26.9 53 0.0018 21.4 3.2 38 23-60 21-67 (87)
150 2dgo_A Cytotoxic granule-assoc 26.9 50 0.0017 23.2 3.2 38 23-60 30-76 (115)
151 2cq2_A Hypothetical protein LO 26.9 78 0.0027 22.6 4.1 38 23-60 42-82 (114)
152 2jwn_A Embryonic polyadenylate 26.5 36 0.0012 24.4 2.3 43 23-65 51-102 (124)
153 1wf1_A RNA-binding protein RAL 26.4 45 0.0015 23.2 2.8 38 23-60 43-81 (110)
154 2xs2_A Deleted in azoospermia- 26.4 34 0.0012 23.5 2.1 37 23-59 24-68 (102)
155 1x4f_A Matrin 3; structural ge 26.2 22 0.00076 25.4 1.1 37 23-59 41-80 (112)
156 1x5s_A Cold-inducible RNA-bind 26.1 47 0.0016 22.7 2.8 38 23-60 27-73 (102)
157 4a8x_A RNA-binding protein wit 26.0 55 0.0019 21.4 3.1 38 23-60 19-66 (88)
158 1x4a_A Splicing factor, argini 25.8 67 0.0023 22.2 3.6 37 23-59 37-79 (109)
159 1x5t_A Splicing factor 3B subu 25.6 54 0.0018 22.0 3.0 38 23-60 20-67 (96)
160 2kxn_B Transformer-2 protein h 25.5 44 0.0015 24.3 2.7 38 23-60 61-107 (129)
161 1wg5_A Heterogeneous nuclear r 25.5 62 0.0021 22.2 3.4 46 23-68 30-84 (104)
162 2dgp_A Bruno-like 4, RNA bindi 25.3 58 0.002 22.3 3.2 37 23-59 28-73 (106)
163 2cpd_A Apobec-1 stimulating pr 25.1 53 0.0018 22.2 3.0 37 23-59 30-69 (99)
164 3tyt_A Heterogeneous nuclear r 25.1 54 0.0019 26.2 3.4 37 23-59 20-60 (205)
165 2cq0_A Eukaryotic translation 25.1 32 0.0011 23.6 1.8 38 23-60 30-76 (103)
166 1x4e_A RNA binding motif, sing 25.0 32 0.0011 22.6 1.7 37 23-59 20-65 (85)
167 1x4g_A Nucleolysin TIAR; struc 25.0 49 0.0017 23.0 2.8 38 23-60 40-80 (109)
168 2khc_A Testis-specific RNP-typ 24.8 41 0.0014 23.8 2.4 38 23-60 55-101 (118)
169 3r27_A HnRNP L, heterogeneous 24.0 55 0.0019 22.7 2.8 37 23-59 36-75 (100)
170 2la4_A Nuclear and cytoplasmic 23.8 55 0.0019 22.2 2.8 37 23-59 42-81 (101)
171 2ku7_A MLL1 PHD3-CYP33 RRM chi 23.7 61 0.0021 23.6 3.2 37 23-59 78-123 (140)
172 2cqc_A Arginine/serine-rich sp 23.6 39 0.0013 22.6 2.0 38 23-60 30-76 (95)
173 1p1t_A Cleavage stimulation fa 23.1 39 0.0013 23.1 1.9 37 23-59 23-68 (104)
174 3ulh_A THO complex subunit 4; 23.1 42 0.0014 23.2 2.1 38 23-60 44-89 (107)
175 2dnz_A Probable RNA-binding pr 22.9 59 0.002 21.7 2.8 37 23-59 20-65 (95)
176 3md1_A Nuclear and cytoplasmic 22.9 41 0.0014 21.8 1.9 38 23-60 16-62 (83)
177 2cpy_A RNA-binding protein 12; 22.7 69 0.0024 22.5 3.2 43 23-65 30-81 (114)
178 1rk8_A CG8781-PA, CG8781-PA pr 22.3 45 0.0015 25.5 2.3 38 23-60 87-133 (165)
179 2lea_A Serine/arginine-rich sp 21.5 87 0.003 22.9 3.7 39 22-60 61-108 (135)
180 2cjk_A Nuclear polyadenylated 21.2 83 0.0029 23.5 3.7 38 23-60 18-64 (167)
181 2jrs_A RNA-binding protein 39; 21.2 43 0.0015 23.4 1.8 37 23-59 41-86 (108)
182 2dhg_A TRNA selenocysteine ass 20.9 47 0.0016 22.7 2.0 38 23-60 24-70 (104)
183 1sjr_A Polypyrimidine tract-bi 20.8 49 0.0017 25.5 2.1 39 22-60 60-103 (164)
184 2lxi_A RNA-binding protein 10; 20.7 82 0.0028 21.0 3.1 38 23-60 16-63 (91)
185 2cqg_A TDP-43, TAR DNA-binding 20.4 67 0.0023 21.9 2.7 38 23-60 30-76 (103)
186 3zzy_A Polypyrimidine tract-bi 20.0 43 0.0015 24.7 1.6 38 22-59 42-84 (130)
187 2cpi_A CCR4-NOT transcription 20.0 30 0.001 24.3 0.7 34 27-60 37-82 (111)
No 1
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=9.1e-74 Score=546.60 Aligned_cols=400 Identities=18% Similarity=0.264 Sum_probs=333.7
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccC--ChhHHhhhcc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY--PKPMHGILGK 79 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~--~~~~~~~~g~ 79 (411)
+||||||++++.+ +++.++.+++++|||||++++++.++|+++||+++++++.++...++.+. .......+|.
T Consensus 19 ~lP~iG~~~~~~~-----~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~~g~ 93 (461)
T 3ld6_A 19 PIPFLGHAIAFGK-----SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGK 93 (461)
T ss_dssp SSTTTBTHHHHHH-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHCT
T ss_pred CcCeeeeHHHhhh-----CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhccCCC
Confidence 3899999999965 68899999999999999999999999999999999999988776665432 2334456675
Q ss_pred ccccccCChhHHHHHHHHHhhhCCCCchhh--hhHH-----------------------HHHHHHHHHHcCCCCChhHHH
Q 039939 80 LSLLTVSGDLHKKLRNVAVSFIGASKSTPA--FLHS-----------------------FTINLMVKHLLSIEPEEPIAF 134 (411)
Q Consensus 80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~~-----------------------~~~~~~~~~~fG~~~~~~~~~ 134 (411)
..++..+|+.|+++|+++++.|+..++... .+.+ +++++++.++||.++++....
T Consensus 94 ~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG~~~~~~~~~ 173 (461)
T 3ld6_A 94 GVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQLNE 173 (461)
T ss_dssp TSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCCH
T ss_pred ccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCcchhhhhhh
Confidence 445667899999999999999998776651 1111 888999999999765432222
Q ss_pred HHHHHHHHHHhh----hcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCHH
Q 039939 135 KILEDFQTFMKG----FVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSEE 205 (411)
Q Consensus 135 ~~~~~~~~~~~~----~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~ 205 (411)
.+.+.+..+... ...+|.++|...+.+..++.+.+.+++.+.+++++... ...+|+++.+++.. .++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~~~~~ls~~ 251 (461)
T 3ld6_A 174 KVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQ--EKIDDILQTLLDATYKDGRPLTDD 251 (461)
T ss_dssp HHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CCCCSHHHHHHTCBCTTSCBCCHH
T ss_pred hhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCcchhhhhHHhhhcccCCCCHH
Confidence 333333333322 23467788877778888888999999999999887665 55789999999753 48888
Q ss_pred HHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCC
Q 039939 206 ETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNV 284 (411)
Q Consensus 206 ~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~ 284 (411)
++..++..+++||+|||+ +++|++++|+.||++|+++++|+++++++. ...++.+++++||||+|||+|+||++|+
T Consensus 252 -ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~--~~~~~~~~l~~lpyl~avi~E~lRl~p~ 328 (461)
T 3ld6_A 252 -EVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN--LPPLTYDQLKDLNLLDRCIKETLRLRPP 328 (461)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT--CCCCCHHHHHTCHHHHHHHHHHHHHSCS
T ss_pred -HHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhccc--ccchhHHHHHHHhhhhheeeeccccCCc
Confidence 999999999999999999 999999999999999999999999998764 3568999999999999999999999999
Q ss_pred CcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCCCCceeeccCCCCCCccHHHHH
Q 039939 285 VKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVISKRVMPFGGGPRLCPGAELAK 362 (411)
Q Consensus 285 ~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~~~~~~~FG~G~r~C~G~~la~ 362 (411)
++.+.|++++|++++||.|||||.|+++.+++||||++|+||++|+||||++++ ...+..|+|||+|+|.|||++||+
T Consensus 329 ~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~pFG~G~r~C~G~~lA~ 408 (461)
T 3ld6_A 329 IMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAY 408 (461)
T ss_dssp CCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCTTCCGGGCCSCHHHHH
T ss_pred hhccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccccCCCcCcCChhHHHHH
Confidence 999999999999999999999999999999999999999999999999999877 345678999999999999999999
Q ss_pred HHHHHHHHHHHHhCeEEecCCCCcc--ccccccccCCceEEEEeCCCCCCC
Q 039939 363 VEISFFLHHLVLNYRWKTQADDYPI--AYPYVEFRRGLLLEIERTNGFDDH 411 (411)
Q Consensus 363 ~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~~~~~ 411 (411)
+|++++++.||++|+|+++++..+. ...++..|+++.|++++|+..--|
T Consensus 409 ~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rss~~~~ 459 (461)
T 3ld6_A 409 VQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRSTHHHH 459 (461)
T ss_dssp HHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC-----
T ss_pred HHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECCCCCcc
Confidence 9999999999999999998765443 334567788999999999876554
No 2
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=5.8e-70 Score=523.68 Aligned_cols=400 Identities=19% Similarity=0.279 Sum_probs=322.9
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hh---HHhh
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KP---MHGI 76 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~---~~~~ 76 (411)
+++|++||++++......++++.++.+|+++||+||++++++.++|+++||+++++++.++. .|.++.. .. ....
T Consensus 30 ~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~~r~~~~~~~~~~~~ 108 (482)
T 3k9v_A 30 TNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTES-AHPQRLEIKPWKAYRDH 108 (482)
T ss_dssp CCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTCC-SSCCCCCCHHHHHHHHH
T ss_pred CCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhcC-CCCCCCCchHHHHHHHh
Confidence 35999999999865433356888999999999999999999999999999999999998753 4444432 21 2222
Q ss_pred h-ccccccccCChhHHHHHHHHHhhh-CCCCchh----------hhh--------------------HHHHHHHHHHHHc
Q 039939 77 L-GKLSLLTVSGDLHKKLRNVAVSFI-GASKSTP----------AFL--------------------HSFTINLMVKHLL 124 (411)
Q Consensus 77 ~-g~~~l~~~~g~~~~~~R~~~~~~~-~~~~l~~----------~~~--------------------~~~~~~~~~~~~f 124 (411)
. +..++++.+|+.|+++|+++++.| +.+.+.. .++ ..+++++++.++|
T Consensus 109 ~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~dvi~~~~f 188 (482)
T 3k9v_A 109 RNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLY 188 (482)
T ss_dssp HTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2 246888899999999999999987 4443332 011 1189999999999
Q ss_pred CCCCCh------hHHHHHHHHHHHHHhhhc---ccCc----cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCc
Q 039939 125 SIEPEE------PIAFKILEDFQTFMKGFV---SLPV----YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGD 191 (411)
Q Consensus 125 G~~~~~------~~~~~~~~~~~~~~~~~~---~~p~----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d 191 (411)
|.+++. .....+.+.+..+..... .+|. +++...+++..+..+.+.+.+.++++++.+........|
T Consensus 189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d 268 (482)
T 3k9v_A 189 EKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGAD 268 (482)
T ss_dssp SCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTSC
T ss_pred ccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence 988731 123445555555443322 2221 223333445556667777888888888876543344578
Q ss_pred hHHHHHccCCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChh
Q 039939 192 FLDVILKKRSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEF 270 (411)
Q Consensus 192 ~l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~ 270 (411)
++..++...+++++ ++..++.++++||+|||+ +++|++++|++||++|+|+++||+++++.+ ..++++++.+|||
T Consensus 269 ~l~~ll~~~~l~~~-ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~---~~~~~~~l~~lpy 344 (482)
T 3k9v_A 269 FLCDIYQQDHLSKK-ELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDN---QTPRAEDLRNMPY 344 (482)
T ss_dssp HHHHHHHHTCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTT---CCCCGGGGGGCHH
T ss_pred HHHHHHhccCCCHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CCCCHHHHhhCHH
Confidence 99998887789999 999999999999999999 999999999999999999999999998754 4789999999999
Q ss_pred HHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc-CCCCceeecc
Q 039939 271 TNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS-VISKRVMPFG 349 (411)
Q Consensus 271 l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~-~~~~~~~~FG 349 (411)
|+|||+|+||++|+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. ..+..++|||
T Consensus 345 l~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~pFg 424 (482)
T 3k9v_A 345 LKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFG 424 (482)
T ss_dssp HHHHHHHHHHHSCSCCEEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGGTCTTSCCCGGGCCTTC
T ss_pred HHHHHHHHhhcCCCCcCcccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccccCCCCCCCCCccccCCC
Confidence 999999999999999998999999999999999999999999999999999999999999999998763 3567899999
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCc--cccccccccCCceEEEEeC
Q 039939 350 GGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYP--IAYPYVEFRRGLLLEIERT 405 (411)
Q Consensus 350 ~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r 405 (411)
.|+|.|+|++||++|++++++.|+++|++++.++... ....++.++++++|++++|
T Consensus 425 ~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R 482 (482)
T 3k9v_A 425 IGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR 482 (482)
T ss_dssp CSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred CCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence 9999999999999999999999999999998765433 2334567788999999987
No 3
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=2.5e-70 Score=519.99 Aligned_cols=391 Identities=26% Similarity=0.451 Sum_probs=324.4
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhccc
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKL 80 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~ 80 (411)
+++|++||++.+.. +++ ++.+++++||+||+++++|.+.++++||+++++++.++...|+..+.......+|..
T Consensus 18 ~~~P~iG~~~~~~~-----~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g~~ 91 (444)
T 2ve3_A 18 FGLPWLGETLNFLN-----DGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILLGPN 91 (444)
T ss_dssp CCBTTTBTHHHHHH-----CTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHHHHCTT
T ss_pred CCCCccccHHHHhc-----CcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHHHHhCcc
Confidence 36899999999864 345 788999999999999988888999999999999998876666655555555666755
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCchhh----------hhH---------------HHHHHHHHHHHcCCCCChhHHHH
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH---------------SFTINLMVKHLLSIEPEEPIAFK 135 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~---------------~~~~~~~~~~~fG~~~~~~~~~~ 135 (411)
+++..+|+.|+++|+++++.|+.+++... +++ .+++++++.++|| ...... .+
T Consensus 92 ~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~fG-~~~~~~-~~ 169 (444)
T 2ve3_A 92 ALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMG-EKVSQN-PQ 169 (444)
T ss_dssp SGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHHTC-HHHHSC-TT
T ss_pred ccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHcC-CCcccH-HH
Confidence 88889999999999999999997665540 111 1899999999999 221111 34
Q ss_pred HHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCHHHHHHH
Q 039939 136 ILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSEEETVSI 210 (411)
Q Consensus 136 ~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~~~~~ 210 (411)
+.+.+..+...+..+|.++|...+++..++.+.+.+++.++++++++.. ....|+++.+++.. .++++ ++..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~~~~~l~~~-~i~~ 246 (444)
T 2ve3_A 170 LFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQP--PSEEDALGILLAARDDNNQPLSLP-ELKD 246 (444)
T ss_dssp HHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCCSSHHHHHHHCBCTTSCBCCHH-HHHH
T ss_pred HHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCccCHHHHHHhccccCCCCCCHH-HHHH
Confidence 4445554444444456666765566677788889999999999887653 34679999999752 37888 9999
Q ss_pred HHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccc
Q 039939 211 VLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVH 289 (411)
Q Consensus 211 ~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~ 289 (411)
++..+++||+|||+ +++|++++|++||++|+++++|++.++++ ..++++++.+||||+|||+|+||++|+++.+.
T Consensus 247 ~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~----~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~ 322 (444)
T 2ve3_A 247 QILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS----QELTAETLKKMPYLDQVLQEVLRLIPPVGGGF 322 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCS----SCCCHHHHTTCHHHHHHHHHHHHHSCSSCEEE
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccC----CCCChhhhhcChHHHHHHHHHHhcCCCccCcc
Confidence 99999999999999 99999999999999999999999988763 36899999999999999999999999999888
Q ss_pred eeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---CCCCceeeccCCCCCCccHHHHHHHHH
Q 039939 290 REAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS---VISKRVMPFGGGPRLCPGAELAKVEIS 366 (411)
Q Consensus 290 R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~---~~~~~~~~FG~G~r~C~G~~la~~~~~ 366 (411)
|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++.. .....++|||+|+|.|||++||++|++
T Consensus 323 R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~ 402 (444)
T 2ve3_A 323 RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMK 402 (444)
T ss_dssp EEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGGGCCSCHHHHHHHHH
T ss_pred ceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCCccCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997552 234569999999999999999999999
Q ss_pred HHHHHHHHhCeEEecCCCCcc--ccccccccCCceEEEEeCC
Q 039939 367 FFLHHLVLNYRWKTQADDYPI--AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 367 ~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~ 406 (411)
++++.|+++|++++.++.... ...++.++++++|++++|.
T Consensus 403 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~ 444 (444)
T 2ve3_A 403 LFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM 444 (444)
T ss_dssp HHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred HHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence 999999999999987654332 2345677889999999983
No 4
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=6.9e-70 Score=522.76 Aligned_cols=399 Identities=20% Similarity=0.275 Sum_probs=307.9
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhc--
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILG-- 78 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g-- 78 (411)
++||+|||++++.. ++++..+.+|+++|||||++++|+.++|+|+||++++++|.++...|++++.......++
T Consensus 16 ~~lP~iGn~~~~~~----~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~~~ 91 (479)
T 3tbg_A 16 LPLPGLGNLLHVDF----QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFG 91 (479)
T ss_dssp CCBTTTBTGGGCCT----TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGTCB
T ss_pred CCcCcccchHhhcC----CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHhccC
Confidence 36999999999854 467788999999999999999999999999999999999988877787665444333332
Q ss_pred --ccc-ccccCChhHHHHHHHHHhhhCCCCchhhhhH-----------------------------HHHHHHHHHHHcCC
Q 039939 79 --KLS-LLTVSGDLHKKLRNVAVSFIGASKSTPAFLH-----------------------------SFTINLMVKHLLSI 126 (411)
Q Consensus 79 --~~~-l~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~-----------------------------~~~~~~~~~~~fG~ 126 (411)
..+ ++..+|+.|+++|+++.+.|+...+....++ .+++++++.++||.
T Consensus 92 ~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~ 171 (479)
T 3tbg_A 92 PRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGR 171 (479)
T ss_dssp TTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHhhcCC
Confidence 123 4556799999999999999876554321111 18899999999998
Q ss_pred CCCh--hHHHHHHHHHHHHHhh--------hcccCccCCC-cccHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCCCchHH
Q 039939 127 EPEE--PIAFKILEDFQTFMKG--------FVSLPVYIPG-THYANAVKARARLSRTVREIVRERQHEN-MRAGEGDFLD 194 (411)
Q Consensus 127 ~~~~--~~~~~~~~~~~~~~~~--------~~~~p~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~d~l~ 194 (411)
.++. .......+.+...... +..+|+.... ....+.....+.....+.+.+..+.+.. ......|.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 251 (479)
T 3tbg_A 172 RFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTE 251 (479)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTTSCCCSHHH
T ss_pred cccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccchhhh
Confidence 8753 2233333333222111 1112221111 1122334445566666677776665543 2234556666
Q ss_pred HHHccC---------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhh
Q 039939 195 VILKKR---------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWED 264 (411)
Q Consensus 195 ~ll~~~---------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 264 (411)
.++... .++++ ++..++.++++||+|||+ +++|++++|++||++|+||++||+.+++.+ ..++.++
T Consensus 252 ~~~~~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~---~~~~~~~ 327 (479)
T 3tbg_A 252 AFLAEMEKAKGNPESSFNDE-NLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQV---RRPEMGD 327 (479)
T ss_dssp HHHHHHHHTTTCTTCSCSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS---SCCCHHH
T ss_pred hhhhhhhhcccCCccchhhH-HHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhc---cccchhh
Confidence 554321 48888 999999999999999999 999999999999999999999999998754 6789999
Q ss_pred hccChhHHHHHHHhhcCCCCCcccc-eeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCC
Q 039939 265 YQQMEFTNNVILEAMRCGNVVKFVH-REAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVI 341 (411)
Q Consensus 265 ~~~l~~l~a~i~E~lRl~p~~~~~~-R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~ 341 (411)
+.+||||+|||+|+||++|+++... |.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++ ..+
T Consensus 328 l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~ 407 (479)
T 3tbg_A 328 QAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVK 407 (479)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTTCCBCC
T ss_pred hccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCCcccCC
Confidence 9999999999999999999999754 5677899999999999999999999999999999999999999999876 346
Q ss_pred CCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-ccc---cccccccCCceEEEEeCCC
Q 039939 342 SKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-PIA---YPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 342 ~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~---~~~~~~~~~~~v~~~~r~~ 407 (411)
+..|+|||+|+|.|||++||++|+++++|.||++|+|++++++. +.. ..++..|++++|+++||+.
T Consensus 408 ~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~~~~v~~~pRs~ 477 (479)
T 3tbg_A 408 PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPRHH 477 (479)
T ss_dssp CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEECCCCBEEEEC--
T ss_pred CCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCCCeEEEEEECCC
Confidence 67899999999999999999999999999999999999976542 222 2234556799999999974
No 5
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=2.2e-69 Score=520.95 Aligned_cols=401 Identities=17% Similarity=0.247 Sum_probs=320.3
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhc--c
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILG--K 79 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g--~ 79 (411)
++|+|||++++.. .+.++..+.+|+++||+||++++++.++|+|+||+++++++.++...|++++.......++ .
T Consensus 15 ~lPliGnl~~l~~---~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~ 91 (494)
T 3swz_A 15 SLPLVGSLPFLPR---HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNR 91 (494)
T ss_dssp CCCEEEEESSCTT---SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTT
T ss_pred CCCeEcchHHhCC---CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCC
Confidence 5999999998853 2357788999999999999999999999999999999999998888888776544444443 3
Q ss_pred cccccc-CChhHHHHHHHHHhhhCC--CCchh--hhh--------H-----------------HHHHHHHHHHHcCCCCC
Q 039939 80 LSLLTV-SGDLHKKLRNVAVSFIGA--SKSTP--AFL--------H-----------------SFTINLMVKHLLSIEPE 129 (411)
Q Consensus 80 ~~l~~~-~g~~~~~~R~~~~~~~~~--~~l~~--~~~--------~-----------------~~~~~~~~~~~fG~~~~ 129 (411)
.++++. +|+.|+++|+++.+.|+. ..+.. ..+ + .+++++++.++||.+++
T Consensus 92 ~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~ 171 (494)
T 3swz_A 92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYK 171 (494)
T ss_dssp CSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHHHHHHSCCCC
T ss_pred CCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHHHHcCCcCC
Confidence 466655 599999999999999973 22221 001 0 18899999999998874
Q ss_pred h--hHHHHHHHHHHHHHhhh------cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc
Q 039939 130 E--PIAFKILEDFQTFMKGF------VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK 199 (411)
Q Consensus 130 ~--~~~~~~~~~~~~~~~~~------~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~ 199 (411)
. +....+......+...+ ..+|+ ++|....++..+..+.+..++.++++++++........|+++.+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~ 251 (494)
T 3swz_A 172 NGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQA 251 (494)
T ss_dssp TTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCCCSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 3 12222222222222111 12343 35554455666677777788888888877654334567999999863
Q ss_pred C---------------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChh
Q 039939 200 R---------------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWE 263 (411)
Q Consensus 200 ~---------------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 263 (411)
. .++++ ++..++..+++||+|||+ +++|++++|++||++|+|+++||+++++.+ ..++++
T Consensus 252 ~~~~~~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~---~~~~~~ 327 (494)
T 3swz_A 252 KMNSDNGNAGPDQDSELLSDN-HILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFS---RTPTIS 327 (494)
T ss_dssp HHTSCCC----CCSSGGGCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS---SCCCGG
T ss_pred HHhhhcccccccccccccCHH-HHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCC---CCCCHH
Confidence 1 36777 999999999999999999 999999999999999999999999998753 578999
Q ss_pred hhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---
Q 039939 264 DYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--- 339 (411)
Q Consensus 264 ~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--- 339 (411)
++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++
T Consensus 328 ~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~ 407 (494)
T 3swz_A 328 DRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQL 407 (494)
T ss_dssp GGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCGGGGBCTTSSSB
T ss_pred HHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCcccccCCCCccc
Confidence 999999999999999999999997 7899999999999999999999999999999999999999999999998762
Q ss_pred -CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-cccc---ccccccCCceEEEEeCCCCC
Q 039939 340 -VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-PIAY---PYVEFRRGLLLEIERTNGFD 409 (411)
Q Consensus 340 -~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~~---~~~~~~~~~~v~~~~r~~~~ 409 (411)
.+...++|||.|+|.|||++||++|++++++.||++|+|+++++.. +... ..+..++++.|++++|.+|+
T Consensus 408 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~~~ 482 (494)
T 3swz_A 408 ISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIKVRQAWR 482 (494)
T ss_dssp CCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEECCCCCEEEEECHHHH
T ss_pred cCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecCCCcEEEEEEcCcCc
Confidence 2456899999999999999999999999999999999999876532 2221 23456789999999998653
No 6
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=2.2e-68 Score=511.50 Aligned_cols=397 Identities=19% Similarity=0.302 Sum_probs=317.3
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHhhhccc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHGILGKL 80 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~~~g~~ 80 (411)
++|++||++++. .++++.++.+++++|||||++++++.++++++||+++++++.++...|+.+... .+....++.
T Consensus 17 ~~p~iG~~~~~~----~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~~ 92 (476)
T 2fdv_A 17 PLPFIGNYLQLN----TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92 (476)
T ss_dssp CBTTTBTGGGCC----TTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHHTTC
T ss_pred CCcccccHhhcC----CcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhcCCC
Confidence 689999999883 246788999999999999999998889999999999999997665556554322 223333346
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCc--hh--h--------hhH-----------------HHHHHHHHHHHcCCCCC--
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKS--TP--A--------FLH-----------------SFTINLMVKHLLSIEPE-- 129 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l--~~--~--------~~~-----------------~~~~~~~~~~~fG~~~~-- 129 (411)
++++.+|+.|+++|+++.+.|+...+ .. . +++ .+++++++.++||.+.+
T Consensus 93 ~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~ 172 (476)
T 2fdv_A 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYK 172 (476)
T ss_dssp SSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHcCCcCCCC
Confidence 78888999999999999999976544 22 0 111 18999999999999765
Q ss_pred hhHHHHHHHHHHHHHhh--------hcccCc---cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHc
Q 039939 130 EPIAFKILEDFQTFMKG--------FVSLPV---YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILK 198 (411)
Q Consensus 130 ~~~~~~~~~~~~~~~~~--------~~~~p~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~ 198 (411)
++...++.+.+..+... ...+|+ ++| ...++..++.+.+.+++.++++++++........|+++.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~ 251 (476)
T 2fdv_A 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLI 251 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 22334444444333221 112333 344 234556677788899999999988765322345799999885
Q ss_pred c---------CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 039939 199 K---------RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQM 268 (411)
Q Consensus 199 ~---------~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l 268 (411)
. ..++++ ++..++.++++||+|||+ +++|++++|++||++|+++++||+++++.+ ..++++++.+|
T Consensus 252 ~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~---~~~~~~~~~~l 327 (476)
T 2fdv_A 252 RMQEEEKNPNTEFYLK-NLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKN---RQPKFEDRAKM 327 (476)
T ss_dssp HHHHTTTCTTCSCSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS---SCCCGGGGGGC
T ss_pred HHHhcccCccccccHH-HHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCC---CCCChhhhhcC
Confidence 3 247888 999999999999999999 999999999999999999999999998753 56899999999
Q ss_pred hhHHHHHHHhhcCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--CCCCce
Q 039939 269 EFTNNVILEAMRCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--VISKRV 345 (411)
Q Consensus 269 ~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~~ 345 (411)
|||+|||+|+||++|+++ .++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. .....+
T Consensus 328 pyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~~~~~~~~~ 407 (476)
T 2fdv_A 328 PYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAF 407 (476)
T ss_dssp HHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCCTTC
T ss_pred hHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCCCCCCCcCc
Confidence 999999999999999999 68999999999999999999999999999999999999999999999997552 245689
Q ss_pred eeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-cc----ccccccccCCceEEEEeCCC
Q 039939 346 MPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-PI----AYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 346 ~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~----~~~~~~~~~~~~v~~~~r~~ 407 (411)
+|||+|+|.|+|++||++|++++++.|+++|++++.++.. +. .......|.++.|++++|+.
T Consensus 408 lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~ 474 (476)
T 2fdv_A 408 VPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474 (476)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEECCCCCEEEEEC--
T ss_pred ccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecCCceEEEEEeccc
Confidence 9999999999999999999999999999999999976542 11 12233445789999999964
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=3.5e-68 Score=510.48 Aligned_cols=397 Identities=19% Similarity=0.271 Sum_probs=320.0
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hhHHhhhcc
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KPMHGILGK 79 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~~~~~g~ 79 (411)
+++|++||++++.. .+++.++.+|+++||+||++++++.++++++||++++++|.++...|+++.. ..+..+++.
T Consensus 16 ~~~PliG~~~~~~~----~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~~~~~ 91 (476)
T 3e6i_A 16 FPLPIIGNLFQLEL----KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDR 91 (476)
T ss_dssp CCBTTTBTGGGCCT----TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGGGGTTS
T ss_pred CCcccccChhhhcc----ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhheecCC
Confidence 46999999999832 4688899999999999999999999999999999999999887666665433 334445554
Q ss_pred ccccccCChhHHHHHHHHHhhhCCCCc-----hhh-------hhH-----------------HHHHHHHHHHHcCCCCCh
Q 039939 80 LSLLTVSGDLHKKLRNVAVSFIGASKS-----TPA-------FLH-----------------SFTINLMVKHLLSIEPEE 130 (411)
Q Consensus 80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l-----~~~-------~~~-----------------~~~~~~~~~~~fG~~~~~ 130 (411)
++++.+|+.|+++|+++.+.|+...+ ... +++ .+++++++.++||.+++.
T Consensus 92 -~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~ 170 (476)
T 3e6i_A 92 -GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDY 170 (476)
T ss_dssp -SSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHHHHHSCCCCT
T ss_pred -CEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88899999999999998888764322 110 111 189999999999998753
Q ss_pred --hHHHHHHHHHHHHHhhh--------cccC---ccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHH
Q 039939 131 --PIAFKILEDFQTFMKGF--------VSLP---VYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVIL 197 (411)
Q Consensus 131 --~~~~~~~~~~~~~~~~~--------~~~p---~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll 197 (411)
+....+...+....... ..+| .++|. ..++..++...+.+++.+.++++++........|+++.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~~~ll 249 (476)
T 3e6i_A 171 NDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLL 249 (476)
T ss_dssp TCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHHHTCCTTSCCSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccHHHHHH
Confidence 23334444443332211 1123 13443 3456677788888999999998876643344678888888
Q ss_pred ccC---------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhcc
Q 039939 198 KKR---------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQ 267 (411)
Q Consensus 198 ~~~---------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~ 267 (411)
... .++.+ ++..++..+++||+|||+ +++|++++|++||++|+++++||+++++.+ ..++++++.+
T Consensus 250 ~~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~---~~~~~~~~~~ 325 (476)
T 3e6i_A 250 VEMEKEKHSAERLYTMD-GITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPS---RIPAIKDRQE 325 (476)
T ss_dssp HHHHSSSSCSSCSCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTT---SCCCGGGGGG
T ss_pred HHHHhcccCCCCCcCHH-HHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCC---CCCChhhccC
Confidence 531 37888 999999999999999999 999999999999999999999999998743 5789999999
Q ss_pred ChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--CCCCc
Q 039939 268 MEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--VISKR 344 (411)
Q Consensus 268 l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~ 344 (411)
||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. .....
T Consensus 326 lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~~~ 405 (476)
T 3e6i_A 326 MPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY 405 (476)
T ss_dssp CHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSSBCCCTT
T ss_pred CchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCCCCCccCccc
Confidence 99999999999999999995 8899999999999999999999999999999999999999999999998662 35678
Q ss_pred eeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCC-Cccc----cccccccCCceEEEEeCCC
Q 039939 345 VMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADD-YPIA----YPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 345 ~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~----~~~~~~~~~~~v~~~~r~~ 407 (411)
++|||.|+|.|||++||++|++++++.|+++|++++..+. .... ......|.++.|++++|+.
T Consensus 406 ~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~~ 473 (476)
T 3e6i_A 406 FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSH 473 (476)
T ss_dssp CCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECCCCCEEEEECC-
T ss_pred eecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCCCeEEEEEeccc
Confidence 9999999999999999999999999999999999985332 2221 2334567899999999975
No 8
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=3.4e-69 Score=518.72 Aligned_cols=394 Identities=21% Similarity=0.326 Sum_probs=307.5
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcC-CccccccCChhHHhhhcc
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNE-EKYFQASYPKPMHGILGK 79 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~-~~~~~~~~~~~~~~~~g~ 79 (411)
+++|++||++++.+ +++.++.+|+++||+||++++++.++|+++||+++++++.++ ...|.++........++
T Consensus 20 ~~~PliGn~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~~~- 93 (485)
T 3nxu_A 20 TPLPFLGNILSYHK-----GFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMK- 93 (485)
T ss_dssp CCBTTTBTGGGGGG-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGGGG-
T ss_pred CCcCeecCcHHhhc-----ChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccccc-
Confidence 46999999999853 578899999999999999999999999999999999999876 44555443322222344
Q ss_pred ccccccCChhHHHHHHHHHhhhCCCCchhh----------hhH-------------------HHHHHHHHHHHcCCCCCh
Q 039939 80 LSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH-------------------SFTINLMVKHLLSIEPEE 130 (411)
Q Consensus 80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~-------------------~~~~~~~~~~~fG~~~~~ 130 (411)
.++++.+|+.|+++|++++++|+.++++.. +++ .+++++++.++||.+.+.
T Consensus 94 ~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG~~~~~ 173 (485)
T 3nxu_A 94 SAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDS 173 (485)
T ss_dssp GSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHSCCCCG
T ss_pred cCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcCCcccc
Confidence 678889999999999999999998876540 110 088999999999998763
Q ss_pred hH--HHHHHHHHHHHHhh---------hcccCcc------CCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchH
Q 039939 131 PI--AFKILEDFQTFMKG---------FVSLPVY------IPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFL 193 (411)
Q Consensus 131 ~~--~~~~~~~~~~~~~~---------~~~~p~~------~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l 193 (411)
.. ...+.+.+..+... ...+|+. ++..... .+....+...+.+.++++.+.. .....|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~l 250 (485)
T 3nxu_A 174 LNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFP--REVTNFLRKSVKRMKESRLEDT-QKHRVDFL 250 (485)
T ss_dssp GGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSC--HHHHHHHHHHHHHHHHHHHHCC----CCCHH
T ss_pred ccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhch--HHHHHHHHHHHHHHHHHHHhcc-CCCcccHH
Confidence 11 12222222221110 1112221 1111111 1233445555555555553322 23467899
Q ss_pred HHHHccC---------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChh
Q 039939 194 DVILKKR---------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWE 263 (411)
Q Consensus 194 ~~ll~~~---------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 263 (411)
+.+++.. .++++ ++..++..+++||+|||+ +++|++++|++||++|+|+++|++++++.+ ..++++
T Consensus 251 ~~ll~~~~~~~~~~~~~l~~~-ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~ 326 (485)
T 3nxu_A 251 QLMIDSQNSKETESHKALSDL-ELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK---APPTYD 326 (485)
T ss_dssp HHHHHHHC--------CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTT---CCCCHH
T ss_pred HHHHHhhhccccccccCCCHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccC---CCCCHH
Confidence 9998632 47888 999999999999999999 999999999999999999999999998754 578999
Q ss_pred hhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCC
Q 039939 264 DYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVI 341 (411)
Q Consensus 264 ~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~ 341 (411)
++.++|||+|||+|+||++|+++.++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++ ...
T Consensus 327 ~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~ 406 (485)
T 3nxu_A 327 TVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNID 406 (485)
T ss_dssp HHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHHTTSC
T ss_pred HHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999765 235
Q ss_pred CCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCc----cccccccccCCceEEEEeCCC
Q 039939 342 SKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYP----IAYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 342 ~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~----~~~~~~~~~~~~~v~~~~r~~ 407 (411)
+..++|||.|+|.|+|++||++|++++++.|+++|++++.++... ....++.++++++|++++|++
T Consensus 407 ~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~ 476 (485)
T 3nxu_A 407 PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDG 476 (485)
T ss_dssp TTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC--
T ss_pred CCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEccC
Confidence 678999999999999999999999999999999999998765421 122345667899999999974
No 9
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-68 Score=514.08 Aligned_cols=401 Identities=18% Similarity=0.264 Sum_probs=307.2
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHhhhcc
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHGILGK 79 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~~~g~ 79 (411)
+++|++||++++. .+++.++.+|+++||+||++++++.++++++||+++++++.++...|.++... .+....++
T Consensus 15 ~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~g 89 (507)
T 3pm0_A 15 FAWPLIGNAAAVG-----QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGG 89 (507)
T ss_dssp ------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHGGGG
T ss_pred CCCCeeCchhhcC-----ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhhcCC
Confidence 3589999999885 36888999999999999999999999999999999999998776677655432 23333334
Q ss_pred ccccc-cCChhHHHHHHHHHhhhCC---CC------chhh-------hh-------------------HHHHHHHHHHHH
Q 039939 80 LSLLT-VSGDLHKKLRNVAVSFIGA---SK------STPA-------FL-------------------HSFTINLMVKHL 123 (411)
Q Consensus 80 ~~l~~-~~g~~~~~~R~~~~~~~~~---~~------l~~~-------~~-------------------~~~~~~~~~~~~ 123 (411)
.++++ .+|+.|+++|+++++.|+. .. +... ++ ..+++++++.++
T Consensus 90 ~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~ 169 (507)
T 3pm0_A 90 RSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVC 169 (507)
T ss_dssp TCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHHHHHHHH
T ss_pred CceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHHHHHHHH
Confidence 56644 5699999999999987642 22 1110 11 118999999999
Q ss_pred cCCCCCh--hHHHHHHHHHHHHHhhh------cccCc--cCCCc---ccHHHHHHHHHHHHHHHHHHHHHHhhccc-CCC
Q 039939 124 LSIEPEE--PIAFKILEDFQTFMKGF------VSLPV--YIPGT---HYANAVKARARLSRTVREIVRERQHENMR-AGE 189 (411)
Q Consensus 124 fG~~~~~--~~~~~~~~~~~~~~~~~------~~~p~--~~p~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 189 (411)
||.+++. +....+.+.+..+...+ ..+|+ ++|.. ..++..++.+.+.+++.+.++++++.... ...
T Consensus 170 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (507)
T 3pm0_A 170 FGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAP 249 (507)
T ss_dssp TSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCCC
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 9998753 22233333333322221 12343 34443 34556677788888888988888765422 446
Q ss_pred CchHHHHHccC-------------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCC
Q 039939 190 GDFLDVILKKR-------------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQ 255 (411)
Q Consensus 190 ~d~l~~ll~~~-------------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~ 255 (411)
.|+++.+++.. .++.+ ++..++..+++||+|||+ +++|++++|++||++|+|+++||+++++.+
T Consensus 250 ~d~l~~ll~~~~~~~~~~~~~~~~~l~~~-~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~- 327 (507)
T 3pm0_A 250 RDMMDAFILSAEKKAAGDSHGGGARLDLE-NVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRD- 327 (507)
T ss_dssp CSHHHHHHHHHHHHHSCC----CCCCCGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTT-
T ss_pred ccHHHHHHHHhhhhccccccCCCCCCCHH-HHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCC-
Confidence 78999888431 37888 999999999999999999 999999999999999999999999998653
Q ss_pred CCCCCChhhhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCC
Q 039939 256 DEEPLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRW 334 (411)
Q Consensus 256 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rf 334 (411)
..++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus 328 --~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRf 405 (507)
T 3pm0_A 328 --RLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405 (507)
T ss_dssp --SCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSSCCGGGG
T ss_pred --CCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCccCCCcc
Confidence 578999999999999999999999999996 78999999999999999999999999999999999999999999999
Q ss_pred CCCccC----CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc---cccccccCCceEEEEeCCC
Q 039939 335 TDKASV----ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA---YPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 335 l~~~~~----~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~v~~~~r~~ 407 (411)
++++.. ....++|||+|+|.|||++||++|++++++.||++|++++.++..... ......++++.|++++|.+
T Consensus 406 l~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~ 485 (507)
T 3pm0_A 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPKSFKVNVTLRES 485 (507)
T ss_dssp BCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEECSCCEEEEESSC
T ss_pred cCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccCCCcEEEEEEccc
Confidence 986521 235899999999999999999999999999999999999986543322 1233456679999999998
Q ss_pred CCC
Q 039939 408 FDD 410 (411)
Q Consensus 408 ~~~ 410 (411)
++.
T Consensus 486 ~~~ 488 (507)
T 3pm0_A 486 MEL 488 (507)
T ss_dssp CSC
T ss_pred ccc
Confidence 764
No 10
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1.1e-67 Score=506.79 Aligned_cols=397 Identities=21% Similarity=0.282 Sum_probs=308.9
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHhhhccc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHGILGKL 80 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~~~g~~ 80 (411)
++|++||++++.. ++++.++.+++++|||||++++++.++++++||+++++++.++...|+++... .+....++.
T Consensus 18 ~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~~~~ 93 (477)
T 1r9o_A 18 PLPVIGNILQIGI----KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGF 93 (477)
T ss_dssp SCC-----CCBCH----HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTTCTT
T ss_pred CCceeccHhhcCC----CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhccCCC
Confidence 6899999988732 35788999999999999999998889999999999999997665555543221 112222335
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCc--h---hh-------hh-----------------HHHHHHHHHHHHcCCCCCh-
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKS--T---PA-------FL-----------------HSFTINLMVKHLLSIEPEE- 130 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l--~---~~-------~~-----------------~~~~~~~~~~~~fG~~~~~- 130 (411)
++++.+|+.|+++|+++.+.|+...+ + .. ++ ..+++++++.++||.+++.
T Consensus 94 ~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~ 173 (477)
T 1r9o_A 94 GIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYK 173 (477)
T ss_dssp SSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHHHSCCCCTT
T ss_pred ceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHccCcCCCC
Confidence 78888999999999999999987632 1 11 11 1189999999999987642
Q ss_pred -hHHHHHHHHHHHHHhhh--------cccCc---cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHc
Q 039939 131 -PIAFKILEDFQTFMKGF--------VSLPV---YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILK 198 (411)
Q Consensus 131 -~~~~~~~~~~~~~~~~~--------~~~p~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~ 198 (411)
+....+.+.+....... ..+|+ ++|. ..++..++...+.+++.++++++++........|+++.++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~ 252 (477)
T 1r9o_A 174 DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPG-THNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLM 252 (477)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence 23344444444333211 12343 2332 23556677788889999999988765322345789998874
Q ss_pred c---------CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 039939 199 K---------RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQM 268 (411)
Q Consensus 199 ~---------~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l 268 (411)
. ..++++ ++..++.++++||+|||+ +++|++++|++||++|+++++||+++++.+ ..++++++++|
T Consensus 253 ~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~~~~~l 328 (477)
T 1r9o_A 253 KMEKEKHNQPSEFTIE-SLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN---RSPCMQDRSHM 328 (477)
T ss_dssp HHHHHTTSCSCSCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS---SCCCGGGGGGC
T ss_pred HHHhhhccCCCCCCHH-HHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCC---CCCChHhhccC
Confidence 2 248888 999999999999999999 999999999999999999999999998753 56899999999
Q ss_pred hhHHHHHHHhhcCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--CCCCce
Q 039939 269 EFTNNVILEAMRCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--VISKRV 345 (411)
Q Consensus 269 ~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~~ 345 (411)
|||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. .....+
T Consensus 329 pyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~~~~~~~~~ 408 (477)
T 1r9o_A 329 PYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYF 408 (477)
T ss_dssp HHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSCBCCCTTC
T ss_pred cHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCCCcCccccc
Confidence 999999999999999999 58999999999999999999999999999999999999999999999997552 245689
Q ss_pred eeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-c---c-ccccccccCCceEEEEeCCC
Q 039939 346 MPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-P---I-AYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 346 ~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~---~-~~~~~~~~~~~~v~~~~r~~ 407 (411)
+|||.|+|.|||++||++|++++++.|+++|++++.++.. + . ....+..|.++.|++++|+.
T Consensus 409 ~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~~ 475 (477)
T 1r9o_A 409 MPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFYQLCFIPIHH 475 (477)
T ss_dssp CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBCCCCCEEEEECCC
T ss_pred cCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecCCCeEEEEEEecc
Confidence 9999999999999999999999999999999999876542 1 1 22233445789999999964
No 11
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=6.2e-68 Score=508.34 Aligned_cols=397 Identities=19% Similarity=0.308 Sum_probs=315.1
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HHhhhccc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MHGILGKL 80 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~~~~g~~ 80 (411)
++|++||++++. .++++.++.+++++|||||++++++.++++++||+++++++.++...|.++.... +....++.
T Consensus 17 ~~p~iG~~~~~~----~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~~ 92 (476)
T 1po5_A 17 PLPVLGNLLQMD----RKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGY 92 (476)
T ss_dssp CBTTTBTGGGCC----TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCCSSC
T ss_pred CCCccccHHhcc----CCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhcCCC
Confidence 689999999882 2478899999999999999999988889999999999999976655565443221 22222335
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCc--hh----------hhh-----------------HHHHHHHHHHHHcCCCCCh-
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKS--TP----------AFL-----------------HSFTINLMVKHLLSIEPEE- 130 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l--~~----------~~~-----------------~~~~~~~~~~~~fG~~~~~- 130 (411)
++++.+|+.|+++|+++.+.|+...+ .. .++ ..+++++++.++||.+.+.
T Consensus 93 ~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~ 172 (476)
T 1po5_A 93 GVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYK 172 (476)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred ceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 78888999999999999999876632 11 011 1189999999999987642
Q ss_pred -hHHHHHHHHHHHHHhhh--------cccCc---cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHc
Q 039939 131 -PIAFKILEDFQTFMKGF--------VSLPV---YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILK 198 (411)
Q Consensus 131 -~~~~~~~~~~~~~~~~~--------~~~p~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~ 198 (411)
+....+.+.+....... ..+|+ ++|. ..++..++.+.+.+++.+.++++++........|+++.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~ 251 (476)
T 1po5_A 173 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG-THRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLL 251 (476)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSC-SHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccHHHHHHH
Confidence 23344444444433111 12332 3443 23556677788889999999988765322345789998874
Q ss_pred c---------CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 039939 199 K---------RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQM 268 (411)
Q Consensus 199 ~---------~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l 268 (411)
. ..++++ ++..++.++++||+|||+ +++|++++|++||++|+++++||+++++.+ ..++++++.+|
T Consensus 252 ~~~~~~~~~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~---~~~~~~~l~~l 327 (476)
T 1po5_A 252 RMEKDKSDPSSEFHHQ-NLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH---RPPALDDRAKM 327 (476)
T ss_dssp HHHHHTCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS---SCCCGGGGGGC
T ss_pred HHHhhccCCCCCCCHH-HHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CCCChHHHhcC
Confidence 2 125667 999999999999999999 999999999999999999999999998743 56899999999
Q ss_pred hhHHHHHHHhhcCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--CCCCce
Q 039939 269 EFTNNVILEAMRCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--VISKRV 345 (411)
Q Consensus 269 ~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~~ 345 (411)
|||+|||+|+||++|+++ .++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. .....+
T Consensus 328 pyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~~~~~~~~~~ 407 (476)
T 1po5_A 328 PYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGF 407 (476)
T ss_dssp HHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCCTTC
T ss_pred cHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCCCCccCCccc
Confidence 999999999999999999 58999999999999999999999999999999999999999999999997552 245689
Q ss_pred eeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC-cc----ccccccccCCceEEEEeCCC
Q 039939 346 MPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY-PI----AYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 346 ~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~----~~~~~~~~~~~~v~~~~r~~ 407 (411)
+|||+|+|.|+|++||++|++++++.|+++|++++.++.. +. ....+..|.++.|++++|+.
T Consensus 408 lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~ 474 (476)
T 1po5_A 408 MPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIRFLARHH 474 (476)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCCCCCCBEEEECC-
T ss_pred cCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecCcceEEEEEecCC
Confidence 9999999999999999999999999999999999876542 11 22233445789999999964
No 12
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=2.2e-67 Score=504.80 Aligned_cols=404 Identities=18% Similarity=0.276 Sum_probs=318.2
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hhHHhhhccc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KPMHGILGKL 80 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~~~~~g~~ 80 (411)
++|++||++.+.... ..++.++.+++++|||||++++++.++++++||+++++++.++...|+++.. ..+..+.+..
T Consensus 19 ~~p~~G~~~~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~~~~~~~ 96 (481)
T 3czh_A 19 GLPFIGNIYSLAASS--ELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG 96 (481)
T ss_dssp CBTTTBHHHHHHHCS--SCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHHHHHTTC
T ss_pred CCcccccHhhcCccc--CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHHHhhcCCC
Confidence 689999999885421 1278899999999999999999988899999999999999877656665432 2233333334
Q ss_pred c-ccccCChhHHHHHHHHHhhhCCCCc-----hhh-------hhH-----------------HHHHHHHHHHHcCCCCC-
Q 039939 81 S-LLTVSGDLHKKLRNVAVSFIGASKS-----TPA-------FLH-----------------SFTINLMVKHLLSIEPE- 129 (411)
Q Consensus 81 ~-l~~~~g~~~~~~R~~~~~~~~~~~l-----~~~-------~~~-----------------~~~~~~~~~~~fG~~~~- 129 (411)
+ ++..+|+.|+++|++++++|+...+ ... +++ .+++++++.++||.+.+
T Consensus 97 ~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 176 (481)
T 3czh_A 97 GLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTY 176 (481)
T ss_dssp SSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred CeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 5 4457899999999999999865432 111 111 17899999999999764
Q ss_pred -hhHHHHHHHHHHHHHhh--------hcccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHc
Q 039939 130 -EPIAFKILEDFQTFMKG--------FVSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILK 198 (411)
Q Consensus 130 -~~~~~~~~~~~~~~~~~--------~~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~ 198 (411)
++....+.+.+..+... ...+|+ ++|....++..++.+.+.+++.++++++++........|+++.+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~ 256 (481)
T 3czh_A 177 EDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLD 256 (481)
T ss_dssp TCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCCSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 22334444444333321 112443 3454445666777888899999999988765322345799999885
Q ss_pred c---------CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 039939 199 K---------RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQM 268 (411)
Q Consensus 199 ~---------~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l 268 (411)
. ..++++ ++..++.++++||+|||+ +++|++++|++||++|+|+++|++++++.+ ..++++++++|
T Consensus 257 ~~~~~~~~~~~~l~~~-ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~~~~~l 332 (481)
T 3czh_A 257 EMDQGKNDPSSTFSKE-NLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN---GKPSWDDKCKM 332 (481)
T ss_dssp HHHHTTTCTTCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS---SCCCGGGGGGC
T ss_pred HHHhcccCccccccHH-HHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCC---CCCChhhhhhC
Confidence 3 147888 999999999999999999 999999999999999999999999998743 57899999999
Q ss_pred hhHHHHHHHhhcCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--CCCCce
Q 039939 269 EFTNNVILEAMRCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS--VISKRV 345 (411)
Q Consensus 269 ~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~--~~~~~~ 345 (411)
|||+|||+|+||++|+++ .++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. ..+..+
T Consensus 333 pyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~ 412 (481)
T 3czh_A 333 PYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEAL 412 (481)
T ss_dssp HHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCCTTC
T ss_pred hHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCceeCCCCCCcCCcce
Confidence 999999999999999999 57899999999999999999999999999999999999999999999997552 356789
Q ss_pred eeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc---ccccccccCCceEEEEeCCCCCCC
Q 039939 346 MPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI---AYPYVEFRRGLLLEIERTNGFDDH 411 (411)
Q Consensus 346 ~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~v~~~~r~~~~~~ 411 (411)
+|||+|+|.|+|++||++|++++++.|+++|++++.++..+. .......|.++.+.+++|.-.--|
T Consensus 413 lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 481 (481)
T 3czh_A 413 VPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLICAERRHHHHHH 481 (481)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCCCCCBEEEECC-----
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCCceEEEEEecccccCC
Confidence 999999999999999999999999999999999987543221 123345577899999999865444
No 13
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=1.8e-68 Score=508.79 Aligned_cols=398 Identities=16% Similarity=0.218 Sum_probs=296.0
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccC-ChhHHhhhccc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY-PKPMHGILGKL 80 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~-~~~~~~~~g~~ 80 (411)
++|++||++++.. +++.++.+++++|||||++++++.+++++++|+++++++.++...|+.+. .......+| .
T Consensus 12 ~~P~iG~~~~~~~-----~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~g-~ 85 (455)
T 2cib_A 12 GHDEHGHLEEFRT-----DPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFG-E 85 (455)
T ss_dssp CCBTTBTHHHHTT-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHHC--
T ss_pred CCCCccCHHHHhh-----ChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhcC-C
Confidence 6899999999843 67889999999999999999998889999999999999987654555432 222334455 3
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCchhh--hhH-----------------------HHHHHHHHHHHcCCCCChhHHHH
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKSTPA--FLH-----------------------SFTINLMVKHLLSIEPEEPIAFK 135 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~-----------------------~~~~~~~~~~~fG~~~~~~~~~~ 135 (411)
+++ .+|+.|+++|++++++|+.++++.. .+. .+++++++.++||.+.+......
T Consensus 86 ~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~ 164 (455)
T 2cib_A 86 GVV-FDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR 164 (455)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHHHHTTCCHH
T ss_pred ccc-cCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCCCcchhhhHH
Confidence 443 5799999999999999998766541 011 18999999999998653211123
Q ss_pred HHHHHHHHHhhhc----ccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccC-CCCchHHHHHccC-----C-CCH
Q 039939 136 ILEDFQTFMKGFV----SLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRA-GEGDFLDVILKKR-----S-LSE 204 (411)
Q Consensus 136 ~~~~~~~~~~~~~----~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~d~l~~ll~~~-----~-~~~ 204 (411)
+.+.+..+...+. .+| +++....++..++...+.+++.++++++++..... ...|+++.+++.. . +++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~ll~~~~~~~~~~l~~ 243 (455)
T 2cib_A 165 FAKLYHELERGTDPLAYVDP-YLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSA 243 (455)
T ss_dssp HHHHHHHHHTTCCGGGGTCT-TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHCBCTTSSBSCCH
T ss_pred HHHHHHHHHhhhhHHHHhcc-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHhhhhcCCCCCCH
Confidence 3344433332221 133 34444445566777888899999999887654222 1339999999653 2 788
Q ss_pred HHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCC
Q 039939 205 EETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGN 283 (411)
Q Consensus 205 ~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p 283 (411)
+ ++..++..+++||+|||+ +++|++++|++||++|+++++||+++++.+ ..++++++.+||||+|||+|+||++|
T Consensus 244 ~-~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~---~~~~~~~l~~lpyl~a~i~E~lRl~p 319 (455)
T 2cib_A 244 D-EITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG---RSVSFHALRQIPQLENVLKETLRLHP 319 (455)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGC---CCHHHHTTSCCHHHHHHHHHHHHHSC
T ss_pred H-HHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CCCCHHHHhcCHHHHHHHHHHHhcCC
Confidence 8 999999999999999999 999999999999999999999999998753 46889999999999999999999999
Q ss_pred CCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc---CCCCceeeccCCCCCCccHHH
Q 039939 284 VVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS---VISKRVMPFGGGPRLCPGAEL 360 (411)
Q Consensus 284 ~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~---~~~~~~~~FG~G~r~C~G~~l 360 (411)
+++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. ..+..++|||+|+|.|||++|
T Consensus 320 ~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G~r~C~G~~l 399 (455)
T 2cib_A 320 PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399 (455)
T ss_dssp SCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCGGGCCTTHHH
T ss_pred cccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCCCCCCCcHHH
Confidence 99988999999999999999999999999999999999999999999999997642 136689999999999999999
Q ss_pred HHHHHHHHHHHHHHhCeEEecCCCCcc----ccccccccCCceEEEEeCCCCCCC
Q 039939 361 AKVEISFFLHHLVLNYRWKTQADDYPI----AYPYVEFRRGLLLEIERTNGFDDH 411 (411)
Q Consensus 361 a~~~~~~~l~~ll~~f~~~~~~~~~~~----~~~~~~~~~~~~v~~~~r~~~~~~ 411 (411)
|++|++++++.|+++|++++..+.... ...+..+++++.|++++|.+...|
T Consensus 400 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R~~~~~~ 454 (455)
T 2cib_A 400 AIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTGVHHH 454 (455)
T ss_dssp HHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC------
T ss_pred HHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEECcccccc
Confidence 999999999999999999987432221 122345556899999999876655
No 14
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=1.6e-67 Score=507.27 Aligned_cols=398 Identities=18% Similarity=0.218 Sum_probs=309.6
Q ss_pred chhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-H---Hhhh-cccc
Q 039939 7 GETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-M---HGIL-GKLS 81 (411)
Q Consensus 7 G~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~---~~~~-g~~~ 81 (411)
+|++.+......++++.++.+|+++|||||++++++.++|+++||+++++++.++. .|.+++... . .... +..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~~~~~~~~~~~~~~~~~ 98 (487)
T 3n9y_A 20 LNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFLIPPWVAYHQYYQRPIG 98 (487)
T ss_dssp HHHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCCCHHHHHHHHHTTCCCC
T ss_pred hhHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCCCcHHHHHHHHccccCC
Confidence 47777765333456888999999999999999999999999999999999998764 454443221 1 1111 3367
Q ss_pred ccccCChhHHHHHHHHHhh-hCCCCchh----------hhh-----------------------HHHHHHHHHHHHcCCC
Q 039939 82 LLTVSGDLHKKLRNVAVSF-IGASKSTP----------AFL-----------------------HSFTINLMVKHLLSIE 127 (411)
Q Consensus 82 l~~~~g~~~~~~R~~~~~~-~~~~~l~~----------~~~-----------------------~~~~~~~~~~~~fG~~ 127 (411)
+++.+|+.|+++|+++++. |+.++++. .++ ..+++++++.++||.+
T Consensus 99 l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~ 178 (487)
T 3n9y_A 99 VLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGER 178 (487)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHHHHHHHHHHHHHHHhccc
Confidence 8899999999999999995 88765543 000 0189999999999998
Q ss_pred CCh------hHHHHHHHHHHHHHhhh---cccCc----cCCCcccHHHHHHHHHHHHHHHHHHHHHHhh----c-ccCCC
Q 039939 128 PEE------PIAFKILEDFQTFMKGF---VSLPV----YIPGTHYANAVKARARLSRTVREIVRERQHE----N-MRAGE 189 (411)
Q Consensus 128 ~~~------~~~~~~~~~~~~~~~~~---~~~p~----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~-~~~~~ 189 (411)
++. .....+.+.+..+.... ..+|. +++...+++..+..+.+.+.+.+.++++.+. . .....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 258 (487)
T 3n9y_A 179 QGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDY 258 (487)
T ss_dssp CCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSC
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence 741 23344444444443322 22232 1222223333444455556666666554332 1 11344
Q ss_pred CchHHHHHccCCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccC
Q 039939 190 GDFLDVILKKRSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQM 268 (411)
Q Consensus 190 ~d~l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l 268 (411)
.|+++.+++..+++++ ++..++..+++||+|||+ +++|++++|++||++|+|+++||+++++.+ ..++.+++++|
T Consensus 259 ~d~l~~ll~~~~l~~~-ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~~l~~l 334 (487)
T 3n9y_A 259 RGILYRLLGDSKMSFE-DIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQA---QGDMATMLQLV 334 (487)
T ss_dssp CCHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHT---TTCHHHHTTSC
T ss_pred HHHHHHHHhcCCCCHH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhccc---ccchhhhhhhC
Confidence 7899999988789999 999999999999999999 999999999999999999999999998764 34569999999
Q ss_pred hhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc-CCCCceee
Q 039939 269 EFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS-VISKRVMP 347 (411)
Q Consensus 269 ~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~-~~~~~~~~ 347 (411)
|||+|||+|+||++|+++.++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++. .....++|
T Consensus 335 pyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~p 414 (487)
T 3n9y_A 335 PLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLG 414 (487)
T ss_dssp HHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTCSCTTSSTTTCCT
T ss_pred HHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccCChhhcCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998653 34678999
Q ss_pred ccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc--ccccccccCCceEEEEeCCCCC
Q 039939 348 FGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI--AYPYVEFRRGLLLEIERTNGFD 409 (411)
Q Consensus 348 FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~~~ 409 (411)
||.|+|.|||++||++|++++++.|+++|+|++.++.... ...++.+++++.|++++|.+..
T Consensus 415 Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~~ 478 (487)
T 3n9y_A 415 FGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPFNQEA 478 (487)
T ss_dssp TCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCEEEEEC----
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCceeEEEECCcch
Confidence 9999999999999999999999999999999998664322 2345677789999999998654
No 15
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.8e-67 Score=506.11 Aligned_cols=400 Identities=20% Similarity=0.297 Sum_probs=313.7
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hhHHhhhccc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KPMHGILGKL 80 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~~~~~g~~ 80 (411)
++|++||++.+.+ +++.++.+++++|||||++++++.++++++||+++++++.++...|+++.. ..+....++.
T Consensus 23 ~~p~~G~~~~~~~-----~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~~~~~ 97 (495)
T 2hi4_A 23 GWPLLGHVLTLGK-----NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQ 97 (495)
T ss_dssp CBTTTBTHHHHTT-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTSTTSC
T ss_pred CCcceeeHHhcCc-----cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHhcCCC
Confidence 5899999998743 578899999999999999999998999999999999999877656664432 2233333346
Q ss_pred ccccc--CChhHHHHHHHHHhhhC---CCCc---------hhh-------hh----H---------------HHHHHHHH
Q 039939 81 SLLTV--SGDLHKKLRNVAVSFIG---ASKS---------TPA-------FL----H---------------SFTINLMV 120 (411)
Q Consensus 81 ~l~~~--~g~~~~~~R~~~~~~~~---~~~l---------~~~-------~~----~---------------~~~~~~~~ 120 (411)
++++. +|+.|+++|++++++|+ ..+. ... ++ + .+++++++
T Consensus 98 ~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~dvi~ 177 (495)
T 2hi4_A 98 SLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIG 177 (495)
T ss_dssp CTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHHHHHHHH
T ss_pred CEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHH
Confidence 77776 69999999999998853 2222 110 11 1 07889999
Q ss_pred HHHcCCCCC--hhHHHHHHHHHHHHHhhh------cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 039939 121 KHLLSIEPE--EPIAFKILEDFQTFMKGF------VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEG 190 (411)
Q Consensus 121 ~~~fG~~~~--~~~~~~~~~~~~~~~~~~------~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 190 (411)
.++||.+++ ++....+.+.+..+.... ..+|+ ++|....++..++.+.+.+++.++++++++........
T Consensus 178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~ 257 (495)
T 2hi4_A 178 AMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVR 257 (495)
T ss_dssp HHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 999998764 223333333333333211 12343 34544455667778888899999999887653223457
Q ss_pred chHHHHHcc---------CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCC
Q 039939 191 DFLDVILKK---------RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPL 260 (411)
Q Consensus 191 d~l~~ll~~---------~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 260 (411)
|+++.+++. ..++++ ++..++.++++||+|||+ +++|++++|++||++|+|+++||+++++.+ ..+
T Consensus 258 d~l~~ll~~~~~~~~~~~~~l~~~-~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~---~~~ 333 (495)
T 2hi4_A 258 DITGALFKHSKKGPRASGNLIPQE-KIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRE---RRP 333 (495)
T ss_dssp SHHHHHHHHHHHCCEETTEECCTH-HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTS---SCC
T ss_pred cHHHHHHHHhhhccCccccCCCHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCC---CCC
Confidence 999999842 137888 999999999999999999 999999999999999999999999998753 568
Q ss_pred ChhhhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc
Q 039939 261 NWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS 339 (411)
Q Consensus 261 ~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~ 339 (411)
+++++.+||||+|||+|+||++|+++. ++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++.
T Consensus 334 ~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~ 413 (495)
T 2hi4_A 334 RLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADG 413 (495)
T ss_dssp CGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCCGGGGBCTTS
T ss_pred ChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccCcccccCCCC
Confidence 999999999999999999999999995 7899999999999999999999999999999999999999999999997653
Q ss_pred C-----CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc---ccccccccCCc-eEEEEeCCCCCC
Q 039939 340 V-----ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPI---AYPYVEFRRGL-LLEIERTNGFDD 410 (411)
Q Consensus 340 ~-----~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~-~v~~~~r~~~~~ 410 (411)
. ....++|||+|+|.|+|++||++|++++++.|+++|++++.++..+. .......|.++ .|+++ |.+...
T Consensus 414 ~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~-R~~~~~ 492 (495)
T 2hi4_A 414 TAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCEHVQAR-RFSINH 492 (495)
T ss_dssp SSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCCCCCCBEEE-CCC---
T ss_pred cccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCCCcceEEEE-EccCCc
Confidence 2 35679999999999999999999999999999999999987654322 12234456677 99999 987655
Q ss_pred C
Q 039939 411 H 411 (411)
Q Consensus 411 ~ 411 (411)
|
T Consensus 493 ~ 493 (495)
T 2hi4_A 493 H 493 (495)
T ss_dssp -
T ss_pred C
Confidence 5
No 16
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=1.1e-67 Score=505.26 Aligned_cols=394 Identities=22% Similarity=0.328 Sum_probs=295.0
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCcccccc-CChhHHhhhcc
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQAS-YPKPMHGILGK 79 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~-~~~~~~~~~g~ 79 (411)
+++|++||++++.+ +++.++.++++ |||||++++++.++++|+||+++++++.++ ...... ....+...+|.
T Consensus 29 ~~~P~iG~~~~~~~-----~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~-~~~~~~~~~~~~~~~~g~ 101 (467)
T 3dbg_A 29 GGVPLLGHGWRLAR-----DPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP-DYHIAGPLWESLEGLLGK 101 (467)
T ss_dssp CCCSTTHHHHHHHH-----CHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT-TC----------------
T ss_pred CCCCcccchHHhcc-----CHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc-CcccccchHHHHHHhcCC
Confidence 36999999999964 67889999987 999999999999999999999999999877 332222 22333445554
Q ss_pred ccccccCChhHHHHHHHHHhhhCCCCchhh--hhHH-----------------------HHHHHHHHHHcCCCCChhHHH
Q 039939 80 LSLLTVSGDLHKKLRNVAVSFIGASKSTPA--FLHS-----------------------FTINLMVKHLLSIEPEEPIAF 134 (411)
Q Consensus 80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~~-----------------------~~~~~~~~~~fG~~~~~~~~~ 134 (411)
.++++.+|+.|+++|++++++|+.+++... .+.+ +++++++.++||.+.+.....
T Consensus 102 ~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g~~~~~~~~~ 181 (467)
T 3dbg_A 102 EGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAE 181 (467)
T ss_dssp --------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSCSSCCHHHHH
T ss_pred CCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhCCcccchhHH
Confidence 688899999999999999999999887651 1111 899999999999998764455
Q ss_pred HHHHHHHHHHhhhc---ccC----ccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CC
Q 039939 135 KILEDFQTFMKGFV---SLP----VYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SL 202 (411)
Q Consensus 135 ~~~~~~~~~~~~~~---~~p----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~ 202 (411)
.+...+..+...+. .+| .+++....++..++.+.+.+++.+++++++++. ....|+++.+++.. .+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~dll~~ll~~~~~~~~~l 259 (467)
T 3dbg_A 182 RLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASG--QKPDDLLTALLEAKDDNGDPI 259 (467)
T ss_dssp HHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTCC--SSCCSHHHHHTTC--------
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHhhccCCCCCC
Confidence 55555555443221 122 234444445566677888889999998887654 45679999999754 37
Q ss_pred CHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcC
Q 039939 203 SEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRC 281 (411)
Q Consensus 203 ~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 281 (411)
+++ ++..++..+++||+|||+ +++|++++|++||++|+++++|++.+++. ..++.+++++||||+|||+|+||+
T Consensus 260 s~~-ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~----~~~~~~~l~~l~yl~a~i~E~lRl 334 (467)
T 3dbg_A 260 GEQ-EIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG----RPVAFEDVRKLRHTGNVIVEAMRL 334 (467)
T ss_dssp CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT----SCCCHHHHTTCHHHHHHHHHHHHH
T ss_pred CHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCHHHHhhCHHHHHHHHHHhhc
Confidence 888 999999999999999999 99999999999999999999999999863 578999999999999999999999
Q ss_pred CCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCCCCceeeccCCCCCCccHH
Q 039939 282 GNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVISKRVMPFGGGPRLCPGAE 359 (411)
Q Consensus 282 ~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~~~~~~~FG~G~r~C~G~~ 359 (411)
+|+++.++|++.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++. ......++|||+|+|.|||++
T Consensus 335 ~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C~G~~ 414 (467)
T 3dbg_A 335 RPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDH 414 (467)
T ss_dssp SCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCCSSCSSSSSCTTHH
T ss_pred CCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCccccCCCCCCCCCccHH
Confidence 999999999999999999999999999999999999999999999999999999765 235678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCeEEecCCCCcccc-ccccccCCceEEEEeCCCC
Q 039939 360 LAKVEISFFLHHLVLNYRWKTQADDYPIAY-PYVEFRRGLLLEIERTNGF 408 (411)
Q Consensus 360 la~~~~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~v~~~~r~~~ 408 (411)
||++|++++++.|+++|++++.++...... .+...|.++.++=..|.-.
T Consensus 415 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~ 464 (467)
T 3dbg_A 415 FSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPHDLLVRPVARHHH 464 (467)
T ss_dssp HHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEEECEEEEEECC--
T ss_pred HHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCCCCccchhhhhcc
Confidence 999999999999999999999876543322 2334455777776666544
No 17
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=4.5e-67 Score=500.56 Aligned_cols=389 Identities=18% Similarity=0.264 Sum_probs=316.1
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCcccccc--CChhHHhhhcc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQAS--YPKPMHGILGK 79 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~--~~~~~~~~~g~ 79 (411)
++|+|||++++.+ +++.++.+++++||+||+++++|.++++|++++++++++.++...+... +......++|
T Consensus 19 ~lP~iG~l~~~~~-----~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~g- 92 (461)
T 3i3k_A 19 PIPFLGHAIAFGK-----SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFG- 92 (461)
T ss_dssp SSTTTBTHHHHHH-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHC-
T ss_pred CCCccccHHhhcc-----CHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhhhhcC-
Confidence 6999999999964 6788999999999999999999999999999999999998876555432 1222344566
Q ss_pred ccccc-cCChhHHHHHHHHHhhhCCCCchhh--hhH-----------------------HHHHHHHHHHHcCCCCChhHH
Q 039939 80 LSLLT-VSGDLHKKLRNVAVSFIGASKSTPA--FLH-----------------------SFTINLMVKHLLSIEPEEPIA 133 (411)
Q Consensus 80 ~~l~~-~~g~~~~~~R~~~~~~~~~~~l~~~--~~~-----------------------~~~~~~~~~~~fG~~~~~~~~ 133 (411)
.+++. .+|+.|+++|+++.+.|+..+++.. .+. .+++++++.++||.+......
T Consensus 93 ~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~~~~G~~~~~~~~ 172 (461)
T 3i3k_A 93 KGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQLN 172 (461)
T ss_dssp TTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCC
T ss_pred CeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHHHccHhhhhHHH
Confidence 45554 4799999999999999987766541 011 177788888899975432111
Q ss_pred HHHHHHHHHHHhh----hcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCH
Q 039939 134 FKILEDFQTFMKG----FVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSE 204 (411)
Q Consensus 134 ~~~~~~~~~~~~~----~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~ 204 (411)
..+.+.+..+... ...+|.|++...+++..++.+.+.+++.+.++++++.. ....|+++.+++.. .+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~d~l~~ll~~~~~~~~~l~~ 250 (461)
T 3i3k_A 173 EKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQ--EKIDDILQTLLDATYKDGRPLTD 250 (461)
T ss_dssp HHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CCCCSHHHHHHTCBCTTSCBCCH
T ss_pred HHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccccHHHHHHHhhhccCCCCCH
Confidence 2233333333322 22367777776677778888889999999999887655 45689999999753 3788
Q ss_pred HHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCC
Q 039939 205 EETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGN 283 (411)
Q Consensus 205 ~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p 283 (411)
+ ++...+..+++||++||+ +++|++++|++||++|+++++|++++++.+ ...++.+++.++|||+|||+|+||++|
T Consensus 251 ~-~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~--~~~~~~~~~~~l~~l~a~i~E~lRl~p 327 (461)
T 3i3k_A 251 D-EVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN--LPPLTYDQLKDLNLLDRCIKETLRLRP 327 (461)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT--CCCCCHHHHHTCHHHHHHHHHHHHHSC
T ss_pred H-HHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCC--CCCCCHHHHhcChHHHHHHHHHHhcCC
Confidence 8 999999999999999999 999999999999999999999999998754 345789999999999999999999999
Q ss_pred CCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCc--cCCCCceeeccCCCCCCccHHHH
Q 039939 284 VVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKA--SVISKRVMPFGGGPRLCPGAELA 361 (411)
Q Consensus 284 ~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~--~~~~~~~~~FG~G~r~C~G~~la 361 (411)
+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||+++. ......++|||+|+|.|||++||
T Consensus 328 ~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G~r~C~G~~~A 407 (461)
T 3i3k_A 328 PIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFA 407 (461)
T ss_dssp SCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSSSCTTCCGGGCCSCHHHH
T ss_pred CccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCcceeCCCCCCCCCcCHHHH
Confidence 9998999999999999999999999999999999999999999999999999876 23567899999999999999999
Q ss_pred HHHHHHHHHHHHHhCeEEecCCCCcccc--c-cccccCCceEE
Q 039939 362 KVEISFFLHHLVLNYRWKTQADDYPIAY--P-YVEFRRGLLLE 401 (411)
Q Consensus 362 ~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~-~~~~~~~~~v~ 401 (411)
++|++++++.||++|++++.++..+... . +..+.+++.++
T Consensus 408 ~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 450 (461)
T 3i3k_A 408 YVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY 450 (461)
T ss_dssp HHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred HHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence 9999999999999999999876543322 2 23444444444
No 18
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=2.9e-66 Score=500.58 Aligned_cols=396 Identities=18% Similarity=0.228 Sum_probs=310.1
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HHhhhc-
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MHGILG- 78 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~~~~g- 78 (411)
+++|++||++++.+.. ...++..+.+|+++|||||++++++.++|+++||++++++++++ .+++++... .....+
T Consensus 51 ~~~P~iGnl~~~~~~~-~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~~~~~~~ 127 (503)
T 3s79_A 51 GYCMGIGPLISHGRFL-WMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLGLQCIGM 127 (503)
T ss_dssp CCCSSSHHHHHHHHHH-HHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHHHHHHTC
T ss_pred CCCceeeehhcccccc-ccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhhhhhhcc
Confidence 3799999999985421 12355678899999999999999999999999999999999643 455444322 222222
Q ss_pred -cccc-cccCChhHHHHHHHHHhhhCCCCchhh-----------------------------hhHHHHHHHHHHHHcCCC
Q 039939 79 -KLSL-LTVSGDLHKKLRNVAVSFIGASKSTPA-----------------------------FLHSFTINLMVKHLLSIE 127 (411)
Q Consensus 79 -~~~l-~~~~g~~~~~~R~~~~~~~~~~~l~~~-----------------------------~~~~~~~~~~~~~~fG~~ 127 (411)
+.++ +..+|+.|+++|+++++.|+..++... .+..+++++++.++||.+
T Consensus 128 ~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~ 207 (503)
T 3s79_A 128 HEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTLFLRIP 207 (503)
T ss_dssp TTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHHHHHcCcc
Confidence 2454 556799999999999999987765541 011189999999999998
Q ss_pred CChhH-HHHHHHHHHHHHhhhcccCc---cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhccc----CCCCchHHHHHcc
Q 039939 128 PEEPI-AFKILEDFQTFMKGFVSLPV---YIPGTHYANAVKARARLSRTVREIVRERQHENMR----AGEGDFLDVILKK 199 (411)
Q Consensus 128 ~~~~~-~~~~~~~~~~~~~~~~~~p~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~d~l~~ll~~ 199 (411)
.++.. ...+.+.+..+.... ..|. .++ ...++..++.+.+.+++.++++++++.... ....|+++.+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~ 285 (503)
T 3s79_A 208 LDESAIVVKIQGYFDAWQALL-IKPDIFFKIS-WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILA 285 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT-TCCHHHHHSG-GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHHHh-cCcHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHh
Confidence 86432 222222222222111 1111 111 234666778888999999999888765321 1234899999853
Q ss_pred ---CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHH
Q 039939 200 ---RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVI 275 (411)
Q Consensus 200 ---~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i 275 (411)
.+++++ ++...+..+++||+|||+ +++|++++|++||++|+|+++||++++++ ..++.++++++|||+|+|
T Consensus 286 ~~~~~l~~~-~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~----~~~~~~~~~~lpyl~avi 360 (503)
T 3s79_A 286 EKRGDLTRE-NVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE----RDIKIDDIQKLKVMENFI 360 (503)
T ss_dssp HHTTSSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTT----SCCCHHHHTTCHHHHHHH
T ss_pred cccCCCCHH-HHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCHHHHhcCHHHHHHH
Confidence 368888 999999999999999999 99999999999999999999999999872 578999999999999999
Q ss_pred HHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCC
Q 039939 276 LEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLC 355 (411)
Q Consensus 276 ~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C 355 (411)
+|+||++|+++.+.|++++|++++||.|||||.|+++.+++||| ++|+||++|+||||++.. +...++|||+|+|.|
T Consensus 361 ~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~--~~~~~~pFg~G~r~C 437 (503)
T 3s79_A 361 YESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV--PYRYFQPFGFGPRGC 437 (503)
T ss_dssp HHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC--CTTTCCSSCCSTTSC
T ss_pred HhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC--CcccccCCCCCCCCC
Confidence 99999999999988999999999999999999999999999999 999999999999999764 566899999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHhCeEEecCCCCcc-----ccccccccCC---ceEEEEeCCCCC
Q 039939 356 PGAELAKVEISFFLHHLVLNYRWKTQADDYPI-----AYPYVEFRRG---LLLEIERTNGFD 409 (411)
Q Consensus 356 ~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~-----~~~~~~~~~~---~~v~~~~r~~~~ 409 (411)
||++||++|++++++.|+++|++++.++.... ...+..++.+ ++|++++|+...
T Consensus 438 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~~~~ 499 (503)
T 3s79_A 438 AGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNSDR 499 (503)
T ss_dssp TTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC---
T ss_pred CcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCCchh
Confidence 99999999999999999999999998654221 1223444443 999999998643
No 19
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=3.6e-66 Score=493.71 Aligned_cols=387 Identities=17% Similarity=0.213 Sum_probs=302.4
Q ss_pred CCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhc----cccccc-cCChhHHHH
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILG----KLSLLT-VSGDLHKKL 93 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g----~~~l~~-~~g~~~~~~ 93 (411)
..++..+.+|+++|||||++++++.++|+++||+++++++.++...............++ +.++++ .+|+.|+++
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~ 89 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQ 89 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCCCcccCCChHHHHHH
Confidence 356788999999999999999999999999999999999975321111111111222222 245554 589999999
Q ss_pred HHHHHhhhCCCCchhh----------hhH-------------------HHHHHHHHHHHcCCCCChh--HHHHHHHHHHH
Q 039939 94 RNVAVSFIGASKSTPA----------FLH-------------------SFTINLMVKHLLSIEPEEP--IAFKILEDFQT 142 (411)
Q Consensus 94 R~~~~~~~~~~~l~~~----------~~~-------------------~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~ 142 (411)
|++++++|+.+++... +++ .+++++++.++||.+.+.. ....+.+.+..
T Consensus 90 Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~ 169 (456)
T 3mdm_A 90 RRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKL 169 (456)
T ss_dssp HHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHHHH
T ss_pred HhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHHHH
Confidence 9999999998766540 111 1889999999999987531 11122232222
Q ss_pred HHhhh----cccCccCCCcc--cHHHHHHHHHHHHHHHHHHHHHHhhcc--cCCCCchHHHHHccC--CCCHHHHHHHHH
Q 039939 143 FMKGF----VSLPVYIPGTH--YANAVKARARLSRTVREIVRERQHENM--RAGEGDFLDVILKKR--SLSEEETVSIVL 212 (411)
Q Consensus 143 ~~~~~----~~~p~~~p~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~d~l~~ll~~~--~~~~~~~~~~~~ 212 (411)
+...+ ..+..++|... .+...++...+..++.++++++++... .....|+++.+++.. .++++ ++..++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~-~l~~~~ 248 (456)
T 3mdm_A 170 MLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDE-GLLDNF 248 (456)
T ss_dssp HHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTSSCSSSH-HHHHHH
T ss_pred HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcCCCCCHH-HHHHHH
Confidence 22211 11222444321 223445566677778888887765431 123569999999754 47777 999999
Q ss_pred HHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCccccee
Q 039939 213 DIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHRE 291 (411)
Q Consensus 213 ~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~ 291 (411)
..+++||+|||+ +++|++++|++||++|+++++|++++++.+ ..++.+++.+||||+|||+|+||++|+++++.|+
T Consensus 249 ~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~r~ 325 (456)
T 3mdm_A 249 VTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK---RYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRL 325 (456)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC---SSCCHHHHHHCHHHHHHHHHHHHHCCSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCC---CCCCHHHHhcCHHHHHHHHHHHHhCCCccccccc
Confidence 999999999999 999999999999999999999999998753 5789999999999999999999999999998899
Q ss_pred eccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHH
Q 039939 292 AIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHH 371 (411)
Q Consensus 292 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ 371 (411)
+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++...+...++|||.|+|.|||++||++|++++++.
T Consensus 326 ~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ 405 (456)
T 3mdm_A 326 LEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAK 405 (456)
T ss_dssp ECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSCCCSSSCCTTCCGGGSCTTHHHHHHHHHHHHHH
T ss_pred cCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCCCCCCcccCCCCCCcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876545678999999999999999999999999999
Q ss_pred HHHhCeEEecCCCCcc--ccccccccCCceEEEEeCCCCC
Q 039939 372 LVLNYRWKTQADDYPI--AYPYVEFRRGLLLEIERTNGFD 409 (411)
Q Consensus 372 ll~~f~~~~~~~~~~~--~~~~~~~~~~~~v~~~~r~~~~ 409 (411)
|+++|++++.+++... ...++.+++++.|++++|...+
T Consensus 406 ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~~ 445 (456)
T 3mdm_A 406 LLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRGWQP 445 (456)
T ss_dssp HHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECCC--
T ss_pred HHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcCCCC
Confidence 9999999998765432 2345677889999999997543
No 20
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=4.6e-66 Score=498.27 Aligned_cols=386 Identities=19% Similarity=0.244 Sum_probs=307.7
Q ss_pred CCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh-HHhh-hccccccccC-ChhHHHHH
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP-MHGI-LGKLSLLTVS-GDLHKKLR 94 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~~~~-~g~~~l~~~~-g~~~~~~R 94 (411)
.++++..+.+|+++|||||++++++.++++|+||+++++++.++...|++++... .... .|..++++.+ |+.|+++|
T Consensus 42 ~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~R 121 (496)
T 3qz1_A 42 QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHK 121 (496)
T ss_dssp SSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHH
T ss_pred CCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHH
Confidence 3578899999999999999999999999999999999999988776676554322 2222 2333888888 99999999
Q ss_pred HHHHhhhCCCCchh--hhhHH-------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhh
Q 039939 95 NVAVSFIGASKSTP--AFLHS-------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGF 147 (411)
Q Consensus 95 ~~~~~~~~~~~l~~--~~~~~-------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 147 (411)
+++++.|+...+.. ..+.+ +++++++.++||. .+++....+.+.+..+....
T Consensus 122 r~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~-~~~~~~~~~~~~~~~~~~~~ 200 (496)
T 3qz1_A 122 KLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGN-KEDTLVHAFHDCVQDLMKTW 200 (496)
T ss_dssp HHHHHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTTSTTC-CCHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHh
Confidence 99999998654332 01110 8899999999998 44434445555554433221
Q ss_pred --------cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----------CCCHHHH
Q 039939 148 --------VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----------SLSEEET 207 (411)
Q Consensus 148 --------~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----------~~~~~~~ 207 (411)
..+|+ ++|....++..++.+.+.+++.+.++++++........|+++.+++.. .++++ +
T Consensus 201 ~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~-~ 279 (496)
T 3qz1_A 201 DHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEG-H 279 (496)
T ss_dssp SSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSSSHHHHTTSSTTCCC-----CCCTH-H
T ss_pred ccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchHHHHHHHHHhccccCCcccccHH-H
Confidence 12443 455555567778888889999999998887643445679999998653 47777 9
Q ss_pred HHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCC-CCCCChhhhccChhHHHHHHHhhcCCCCC
Q 039939 208 VSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQD-EEPLNWEDYQQMEFTNNVILEAMRCGNVV 285 (411)
Q Consensus 208 ~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~ 285 (411)
+..++.++++||+|||+ +++|++++|++||++|+|+++|++++++.+.. +..+ ++++++||||+|||+|+||++|++
T Consensus 280 i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~ 358 (496)
T 3qz1_A 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVV 358 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCc
Confidence 99999999999999999 99999999999999999999999999876321 2456 899999999999999999999999
Q ss_pred cc-cceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHH
Q 039939 286 KF-VHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVE 364 (411)
Q Consensus 286 ~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~ 364 (411)
+. ++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++ ....++|||.|+|.|||++||++|
T Consensus 359 ~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~--~~~~~~pFg~G~r~C~G~~lA~~e 436 (496)
T 3qz1_A 359 PLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPG--ANPSALAFGCGARVCLGESLARLE 436 (496)
T ss_dssp SSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC-----CCCCCCSSCCSSSSCSSHHHHHHH
T ss_pred ccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccccCCC--CCcCccCCCCCCCCCccHHHHHHH
Confidence 96 789999999999999999999999999999999999999999999999866 334899999999999999999999
Q ss_pred HHHHHHHHHHhCeEEecCCCC-cc--c---cccccccCCceEEEEeCCCC
Q 039939 365 ISFFLHHLVLNYRWKTQADDY-PI--A---YPYVEFRRGLLLEIERTNGF 408 (411)
Q Consensus 365 ~~~~l~~ll~~f~~~~~~~~~-~~--~---~~~~~~~~~~~v~~~~r~~~ 408 (411)
++++++.|+++|++++.++.. +. . ......++++.|++++|++.
T Consensus 437 ~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~ 486 (496)
T 3qz1_A 437 LFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVRLQPRGVE 486 (496)
T ss_dssp HHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCCCCCCCCCCC---
T ss_pred HHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCCceEEEEEEeccc
Confidence 999999999999999875431 11 1 12345567999999999753
No 21
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=7.3e-66 Score=490.88 Aligned_cols=388 Identities=18% Similarity=0.245 Sum_probs=316.4
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hhHHhhhcc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KPMHGILGK 79 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~~~~~g~ 79 (411)
++|+|||++++.+ +++.++.+++++|| +||++++++.++++++||+++++++.++...++.+.. ......+|.
T Consensus 11 ~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~g~ 85 (450)
T 3gw9_A 11 TVPILGHIIQFGK-----SPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE 85 (450)
T ss_dssp CSTTTBTHHHHHH-----CHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHHHHCT
T ss_pred CcchhccHHHHcc-----CHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHHHhcC
Confidence 4999999999964 57889999999999 9999999999999999999999999887766665432 234455664
Q ss_pred cccc-ccCChhHHHHHHHHHhhhCCCCchh----------hhhH-H----------------HHHHHHHHHHcCCCCChh
Q 039939 80 LSLL-TVSGDLHKKLRNVAVSFIGASKSTP----------AFLH-S----------------FTINLMVKHLLSIEPEEP 131 (411)
Q Consensus 80 ~~l~-~~~g~~~~~~R~~~~~~~~~~~l~~----------~~~~-~----------------~~~~~~~~~~fG~~~~~~ 131 (411)
+++ ..+++.|+++|+++++.|+.+++.. .+++ . +++++++.++||.+....
T Consensus 86 -~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~ 164 (450)
T 3gw9_A 86 -GVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKR 164 (450)
T ss_dssp -TSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred -CcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHHHcCcchhhh
Confidence 554 4689999999999999999877664 1122 1 889999999999876421
Q ss_pred -HHHHHHHHHHHHHhhh----cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhc--ccCCCCchHHHHHccC--
Q 039939 132 -IAFKILEDFQTFMKGF----VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHEN--MRAGEGDFLDVILKKR-- 200 (411)
Q Consensus 132 -~~~~~~~~~~~~~~~~----~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~d~l~~ll~~~-- 200 (411)
....+.+.+..+.... ..+|+ ++|....++..++...+.+++.++++++++.. ......|+++.+++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~ 244 (450)
T 3gw9_A 165 LDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYR 244 (450)
T ss_dssp SCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSHHHHHHHCBCT
T ss_pred hhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchHHHHHHHhhcc
Confidence 1334444444443222 12343 45555556667788889999999998887542 2245689999999753
Q ss_pred ---CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHh--hChHHHHHHHHHHHHHhccCCCCCCCChhhh-ccChhHHH
Q 039939 201 ---SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLA--HAPAVFQKLKEEHRAIRKSKQDEEPLNWEDY-QQMEFTNN 273 (411)
Q Consensus 201 ---~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~--~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~-~~l~~l~a 273 (411)
.++++ ++..++..+++||+|||+ +++|++++|+ .||++|+++++|++++ +..++.+++ .+||||+|
T Consensus 245 ~~~~l~~~-~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~------~~~~~~~~~~~~lpyl~a 317 (450)
T 3gw9_A 245 DGTPMSLH-EVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF------PAQLNYNNVMDEMPFAER 317 (450)
T ss_dssp TSCBCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC------CSSCCHHHHHHHCHHHHH
T ss_pred CCCCCCHH-HHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc------cCCCChHHHHHhcHHHHH
Confidence 48888 999999999999999999 9999999999 9999999999999887 246899999 99999999
Q ss_pred HHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCC
Q 039939 274 VILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPR 353 (411)
Q Consensus 274 ~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r 353 (411)
||+|+||++|+++.++|++.+|++++||.|||||.|+++.+++||||++|+||++|+|||+. .....++|||+|+|
T Consensus 318 ~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~----~~~~~~~~Fg~G~r 393 (450)
T 3gw9_A 318 CARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE----KVEGAFIGFGAGVH 393 (450)
T ss_dssp HHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC----SSTTCCCTTCCGGG
T ss_pred HHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc----CCCCceeCCCCCCC
Confidence 99999999999998889999999999999999999999999999999999999999999932 23578999999999
Q ss_pred CCccHHHHHHHHHHHHHHHHHhCeEEecCCCCc--ccc-cccccc-CCceEEEEeCC
Q 039939 354 LCPGAELAKVEISFFLHHLVLNYRWKTQADDYP--IAY-PYVEFR-RGLLLEIERTN 406 (411)
Q Consensus 354 ~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~--~~~-~~~~~~-~~~~v~~~~r~ 406 (411)
.|||++||++|++++++.|+++|++++.+++.+ ... .+..++ .++.|++++|.
T Consensus 394 ~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R~ 450 (450)
T 3gw9_A 394 KCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK 450 (450)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEECC
T ss_pred CCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeecC
Confidence 999999999999999999999999999854322 222 234555 58999999984
No 22
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=2e-65 Score=489.75 Aligned_cols=391 Identities=15% Similarity=0.208 Sum_probs=305.5
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhH---Hhhhc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPM---HGILG 78 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~---~~~~g 78 (411)
++|++||++++.. ++++..+.+|+++|||||++++++.+.++++||+++++++.+. .|........ ....+
T Consensus 10 ~~p~iG~l~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~~~~~ 83 (470)
T 2ij2_A 10 TFGELKNLPLLNT----DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVRDFAG 83 (470)
T ss_dssp CCGGGTTGGGGCS----SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHHHHHT
T ss_pred CCCccccHHHHhc----ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHHHhcC
Confidence 6899999999843 4677889999999999999999999999999999999999643 2332222212 22233
Q ss_pred ccccccc--CChhHHHHHHHHHhhhCCCCchhh----------hhH------------------HHHHHHHHHHHcCCCC
Q 039939 79 KLSLLTV--SGDLHKKLRNVAVSFIGASKSTPA----------FLH------------------SFTINLMVKHLLSIEP 128 (411)
Q Consensus 79 ~~~l~~~--~g~~~~~~R~~~~~~~~~~~l~~~----------~~~------------------~~~~~~~~~~~fG~~~ 128 (411)
.++++. +|+.|+++|++++++|+..++... +++ .+++++++.++||.+.
T Consensus 84 -~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 162 (470)
T 2ij2_A 84 -DGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRF 162 (470)
T ss_dssp -TSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHSCCC
T ss_pred -CceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHcCCcc
Confidence 567665 899999999999999999887651 110 0889999999999886
Q ss_pred Chh---HHHHHHHHHHHHHhhh---ccc-Cc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc
Q 039939 129 EEP---IAFKILEDFQTFMKGF---VSL-PV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK 199 (411)
Q Consensus 129 ~~~---~~~~~~~~~~~~~~~~---~~~-p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~ 199 (411)
+.. ....+.+.+....... ... |+ +++....++..++.+.+.+++.++++++++.. ....|+++.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~dll~~ll~~ 240 (470)
T 2ij2_A 163 NSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASG--EQSDDLLTHMLNG 240 (470)
T ss_dssp CGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCSSHHHHHHHC
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCchhHHHHHHhc
Confidence 531 1223333333322211 111 11 22222234455667778888899998887654 4457999999964
Q ss_pred C------CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHH
Q 039939 200 R------SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTN 272 (411)
Q Consensus 200 ~------~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~ 272 (411)
. .++++ ++..++..+++||+|||+ +++|++++|++||++|+++++|++++++. ..++++++.+||||+
T Consensus 241 ~~~~~~~~ls~~-ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~----~~~~~~~~~~lpyl~ 315 (470)
T 2ij2_A 241 KDPETGEPLDDE-NIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD----PVPSYKQVKQLKYVG 315 (470)
T ss_dssp CCTTTCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS----SSCCHHHHHTCHHHH
T ss_pred cCcccCCCCCHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC----CCCCHHHHhCCHHHH
Confidence 2 47888 999999999999999999 99999999999999999999999999864 358999999999999
Q ss_pred HHHHHhhcCCCCCcccceeeccccccCC-EEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCCCCc-cCCCCceeecc
Q 039939 273 NVILEAMRCGNVVKFVHREAIRDVKFKE-YLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWTDKA-SVISKRVMPFG 349 (411)
Q Consensus 273 a~i~E~lRl~p~~~~~~R~~~~d~~l~g-~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~-~~~~~~~~~FG 349 (411)
|||+|+||++|+++.+.|.+.+|++++| |.|||||.|+++.+++||||++| +||++|+|||| ++. ..+...++|||
T Consensus 316 a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~~~~~~~~~~~pFG 394 (470)
T 2ij2_A 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFKPFG 394 (470)
T ss_dssp HHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SSGGGSCTTSCCTTC
T ss_pred HHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CCCCcCCCccccCCC
Confidence 9999999999999998899999999999 99999999999999999999999 99999999999 322 22457899999
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCCccc-cccccccCCceEEEEeCCC
Q 039939 350 GGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDYPIA-YPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 350 ~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~v~~~~r~~ 407 (411)
.|+|.|+|++||++|++++++.|+++|+++..++..... ...+..+.++.|++++|..
T Consensus 395 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~ 453 (470)
T 2ij2_A 395 NGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453 (470)
T ss_dssp CGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEETTCEEEEEECCC
T ss_pred CCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccccccceEecCCCeEEEEEEccC
Confidence 999999999999999999999999999998222212111 1223334499999999963
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=8.4e-64 Score=481.62 Aligned_cols=394 Identities=15% Similarity=0.201 Sum_probs=312.9
Q ss_pred CcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCc-cccccCChhHHhhhcccc
Q 039939 3 WPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEK-YFQASYPKPMHGILGKLS 81 (411)
Q Consensus 3 ~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~-~~~~~~~~~~~~~~g~~~ 81 (411)
+|+|||++++.+ +++.++.+++++|||||++++++.++++|++|+++++++.++.. .++..+......++|...
T Consensus 22 lPliG~~~~~~~-----~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~~~~g~~~ 96 (491)
T 3v8d_A 22 IPYLGCALQFGA-----NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSAKAFGHRS 96 (491)
T ss_dssp ESSTTTTGGGTC-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHHHHHTCCC
T ss_pred cceeccHHHHhc-----CHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHHHhcCCcc
Confidence 699999999953 78999999999999999999999999999999999999977652 344444445567777656
Q ss_pred ccccCChhHHHHHHHHHhhhCCCCchhh----------hh----------------------HHHHHHHHHHHHcCCCCC
Q 039939 82 LLTVSGDLHKKLRNVAVSFIGASKSTPA----------FL----------------------HSFTINLMVKHLLSIEPE 129 (411)
Q Consensus 82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~----------------------~~~~~~~~~~~~fG~~~~ 129 (411)
+...+|+.|+++|+++.+.|+.+++... ++ ..+++++++..+||.+..
T Consensus 97 ~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~fG~~~~ 176 (491)
T 3v8d_A 97 IDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLT 176 (491)
T ss_dssp CCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHHHHHCBCCS
T ss_pred cccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHHHHcCcccc
Confidence 6667899999999999999988766540 01 117778888889998864
Q ss_pred h--hH---HHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----
Q 039939 130 E--PI---AFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR---- 200 (411)
Q Consensus 130 ~--~~---~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~---- 200 (411)
. .. ..+..+.+..+...+..+..++|....++..++++.+.+.+.+.+.+++ ....|+++.++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~-----~~~~d~l~~l~~~~~~~~ 251 (491)
T 3v8d_A 177 RRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR-----ESISELISLRMFLNDTLS 251 (491)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC-----BSCCHHHHHHHHHHHHHB
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc-----ccccHHHHHHHHHhhccC
Confidence 2 12 2222333333333333344456767778888888887777776655443 23578888887532
Q ss_pred CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCC-------CCCCChhhhccChhHH
Q 039939 201 SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQD-------EEPLNWEDYQQMEFTN 272 (411)
Q Consensus 201 ~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-------~~~~~~~~~~~l~~l~ 272 (411)
.++++ ++...+..+++||++||+ +++|++++|++||++++++++||+++++.++. ...++.+++.++|||+
T Consensus 252 ~~~~~-ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 330 (491)
T 3v8d_A 252 TFDDL-EKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLD 330 (491)
T ss_dssp CCCHH-HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHH
T ss_pred CCchH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHHHHhcChHHH
Confidence 48888 999999999999999999 99999999999999999999999999876432 2468999999999999
Q ss_pred HHHHHhhcCCCCCcccceeecccccc----CCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccC--------
Q 039939 273 NVILEAMRCGNVVKFVHREAIRDVKF----KEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASV-------- 340 (411)
Q Consensus 273 a~i~E~lRl~p~~~~~~R~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~-------- 340 (411)
|||+|+||++| .+.+.|.+.+|+++ +||.||||+.|+++.+++||||++|+||++|+||||++.+..
T Consensus 331 a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~ 409 (491)
T 3v8d_A 331 SIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCN 409 (491)
T ss_dssp HHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEET
T ss_pred HHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccCcccccCCCCCcccccccc
Confidence 99999999997 45677999999999 999999999999999999999999999999999999976521
Q ss_pred ---CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC--ccc----c--ccccccCCceEEEEeCCCC
Q 039939 341 ---ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY--PIA----Y--PYVEFRRGLLLEIERTNGF 408 (411)
Q Consensus 341 ---~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~----~--~~~~~~~~~~v~~~~r~~~ 408 (411)
....++|||+|+|.|||++||++|++++++.|+++|+|++++++. +.. . .++.++.++.|+++-..-.
T Consensus 410 ~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~~~~~~ 488 (491)
T 3v8d_A 410 GLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKFKHHH 488 (491)
T ss_dssp TEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCEEEEEECSCC
T ss_pred cccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeEEEEEecccc
Confidence 356789999999999999999999999999999999999986532 111 1 1245566888888765543
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=2.5e-63 Score=478.56 Aligned_cols=394 Identities=15% Similarity=0.204 Sum_probs=289.4
Q ss_pred CcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCc-cccccCChhHHhhhcccc
Q 039939 3 WPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEK-YFQASYPKPMHGILGKLS 81 (411)
Q Consensus 3 ~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~-~~~~~~~~~~~~~~g~~~ 81 (411)
+|+|||++++.+ +++.++.+++++||+||++++++.++++++||+++++++.++.. .+.......+...+| .+
T Consensus 22 ~P~iG~~~~~~~-----~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~~~~~g-~~ 95 (491)
T 3dax_A 22 IPYLGCALQFGA-----NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATSAKAFG-HR 95 (491)
T ss_dssp ESCTTTTGGGTC-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHHHHHHT-CC
T ss_pred ccchhhHHHHhh-----CHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHHHHHcC-CC
Confidence 799999999843 57889999999999999999999999999999999999976642 333222223334555 45
Q ss_pred cc-ccCChhHHHHHHHHHhhhCCCCchhh--------------------------------hhHHHHHHHHHHHHcCCCC
Q 039939 82 LL-TVSGDLHKKLRNVAVSFIGASKSTPA--------------------------------FLHSFTINLMVKHLLSIEP 128 (411)
Q Consensus 82 l~-~~~g~~~~~~R~~~~~~~~~~~l~~~--------------------------------~~~~~~~~~~~~~~fG~~~ 128 (411)
++ ..+|+.|+++|+.+.+.|+.+++... ++..+++++++.++||.+.
T Consensus 96 ~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~fG~~~ 175 (491)
T 3dax_A 96 SIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDL 175 (491)
T ss_dssp CCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHHHHHHCBCS
T ss_pred cccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHHcCccc
Confidence 55 67889999999988888876544330 0111555666666799876
Q ss_pred Chh--H---HHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc----
Q 039939 129 EEP--I---AFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK---- 199 (411)
Q Consensus 129 ~~~--~---~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~---- 199 (411)
... . ...+.+.+..+...+-.+..++|....++..++.+.+.+.+ ++++.+.. ....|+++.+++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~d~l~~ll~~~~~~ 250 (491)
T 3dax_A 176 TRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENLQKR--ESISELISLRMFLNDTL 250 (491)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHHTTC--BSCCHHHHHHHHHHHHH
T ss_pred ccccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHhhcc--cchhHHHHHHHHHHHhc
Confidence 431 1 11222222211111111112344444444444444443332 22222222 3457888887642
Q ss_pred CCCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCC-------CCCChhhhccChhH
Q 039939 200 RSLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDE-------EPLNWEDYQQMEFT 271 (411)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~-------~~~~~~~~~~l~~l 271 (411)
..++++ ++..++..+++||++||+ +++|++++|++||++|+|+++||+++++.++.. ..++++++.+||||
T Consensus 251 ~~~~~~-~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl 329 (491)
T 3dax_A 251 STFDDL-EKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVL 329 (491)
T ss_dssp BCCCHH-HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHCCHHH
T ss_pred CCChHH-HHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHHHHhcCHHH
Confidence 247777 898889999999999999 999999999999999999999999998754211 14799999999999
Q ss_pred HHHHHHhhcCCCCCcccceeecccccc----CCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCcc--------
Q 039939 272 NNVILEAMRCGNVVKFVHREAIRDVKF----KEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKAS-------- 339 (411)
Q Consensus 272 ~a~i~E~lRl~p~~~~~~R~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~-------- 339 (411)
+|||+|+||++|+ +.++|.+.+|+++ +||.|||||.|+++.+++||||++|+||++|+||||+++++
T Consensus 330 ~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~ 408 (491)
T 3dax_A 330 DSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYC 408 (491)
T ss_dssp HHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEE
T ss_pred HHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCCccccCCCccccccccc
Confidence 9999999999974 6788999999999 68999999999999999999999999999999999997542
Q ss_pred ---CCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCCC--ccc----cc--cccccCCceEEEEeCCCC
Q 039939 340 ---VISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADDY--PIA----YP--YVEFRRGLLLEIERTNGF 408 (411)
Q Consensus 340 ---~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~----~~--~~~~~~~~~v~~~~r~~~ 408 (411)
..+..++|||+|+|.|||++||++|++++++.||++|++++.++.. +.. .. +..++.++.|+++...-.
T Consensus 409 ~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~~~~ 488 (491)
T 3dax_A 409 NGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKFKHHH 488 (491)
T ss_dssp TTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCEEEEEECCCC
T ss_pred cCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCceEEEEecccc
Confidence 1356899999999999999999999999999999999999976531 211 12 235556788888877654
Q ss_pred C
Q 039939 409 D 409 (411)
Q Consensus 409 ~ 409 (411)
-
T Consensus 489 ~ 489 (491)
T 3dax_A 489 H 489 (491)
T ss_dssp -
T ss_pred c
Confidence 3
No 25
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=1.2e-61 Score=456.57 Aligned_cols=371 Identities=16% Similarity=0.225 Sum_probs=295.1
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhcCCccccc--cCCh-hHHhh
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQA--SYPK-PMHGI 76 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~--~~~~-~~~~~ 76 (411)
|+.|++||++++.. +|+.++.+++++|| |||++.++|.+++++++|++++.++. .. .|+. .++. ....+
T Consensus 6 Pg~P~lG~~~~~~~-----~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~~-~~~~~~~~~~~~~~~~ 78 (417)
T 1izo_A 6 PHDKSLDNSLTLLK-----EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-TD-RFQRQNALPKRVQKSL 78 (417)
T ss_dssp CBCCCTTHHHHHHH-----HGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-TT-TEECTTCSCHHHHTTT
T ss_pred CCCCccchHHHHhh-----CcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-cc-ccccccccccchhhhh
Confidence 45799999999964 67889999999998 99999988889999999999986553 32 3332 2232 23345
Q ss_pred hccccccccCChhHHHHHHHHHhhhCCCCchhh----------hhH---------------HHHHHHHHHHHcCCCCChh
Q 039939 77 LGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH---------------SFTINLMVKHLLSIEPEEP 131 (411)
Q Consensus 77 ~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~---------------~~~~~~~~~~~fG~~~~~~ 131 (411)
+|..+++..+|+.|+++|++++++|+.+++... +++ .+++++++.+ ||.+.++.
T Consensus 79 ~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~ 157 (417)
T 1izo_A 79 FGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYW-AGVPLKET 157 (417)
T ss_dssp TCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHH-HTCCCCTT
T ss_pred ccccceeecCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-cCCCCCch
Confidence 665678889999999999999999998776651 111 1888999987 59887653
Q ss_pred HHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCHHH
Q 039939 132 IAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSEEE 206 (411)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~ 206 (411)
...++.+.+..+...+.. . ....++..++.+.+.+++.++|+++++........|+++.+++.. .++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~g~~l~~~- 231 (417)
T 1izo_A 158 EVKERADDFIDMVDAFGA---V--GPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSR- 231 (417)
T ss_dssp THHHHHHHHHHHHHHTTC---C--SHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHH-
T ss_pred HHHHHHHHHHHHHhhccc---C--CccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHHHHHhccccCCCCCHH-
Confidence 444555555444432211 1 123345667788889999999998876532234578999998652 36666
Q ss_pred HHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCC
Q 039939 207 TVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVV 285 (411)
Q Consensus 207 ~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~ 285 (411)
++..++..++ ||++||+ +++|++++|++||++|+++++| +++||+|+|+|+||++|++
T Consensus 232 ~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--------------------~~~~l~a~i~E~lRl~p~~ 290 (417)
T 1izo_A 232 MAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG--------------------NSREREMFVQEVRRYYPFG 290 (417)
T ss_dssp HHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--------------------CHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--------------------CCHHHHHHHHHHhhcCCcc
Confidence 7777776655 8999999 9999999999999999999987 3689999999999999999
Q ss_pred cccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCC----CCCCccHHHH
Q 039939 286 KFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGG----PRLCPGAELA 361 (411)
Q Consensus 286 ~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G----~r~C~G~~la 361 (411)
+.+.|++.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.+ .....++|||+| +|.|+|++||
T Consensus 291 ~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~-~~~~~~~~FG~G~r~~~r~C~G~~lA 369 (417)
T 1izo_A 291 PFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE-ENLFDMIPQGGGHAEKGHRCPGEGIT 369 (417)
T ss_dssp CEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC-CCSSSCCTTCSSCTTSSSCCTTHHHH
T ss_pred cccceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC-CCCcceeCCCCCCCCCCCcCCCHHHH
Confidence 99899999999999999999999999999999999999999999999999764 245689999999 5999999999
Q ss_pred HHHHHHHHHHHHHhCeEEecCCCCccc--cccccccCCceEEEEeCCC
Q 039939 362 KVEISFFLHHLVLNYRWKTQADDYPIA--YPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 362 ~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~~ 407 (411)
++|++++++.|+++|++++.+++.... .....+++++.|++++|.+
T Consensus 370 ~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~ 417 (417)
T 1izo_A 370 IEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRKS 417 (417)
T ss_dssp HHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC-
T ss_pred HHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCCC
Confidence 999999999999999999876542222 2235667899999999863
No 26
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=1.4e-60 Score=449.05 Aligned_cols=370 Identities=16% Similarity=0.220 Sum_probs=291.6
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhh-ccccccccCCCCeEEecChhhhHHHHhcCCcccccc--CCh-hHHhh
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIY-GQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQAS--YPK-PMHGI 76 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~y-G~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~--~~~-~~~~~ 76 (411)
|+.|++||++++.. +|+.++.+++++| ||||++.+++.+++++++|++++ ++.+.. .|+.. ++. ....+
T Consensus 5 Pg~P~iG~~~~~~~-----~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~~-~f~~~~~~~~~~~~~~ 77 (415)
T 3awm_A 5 PHTKGPDETLSLLA-----DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDTT-RFEREGAMPVAIQKTL 77 (415)
T ss_dssp ----CCCCHHHHHH-----STTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCTT-TEECTTCSCHHHHTTT
T ss_pred CCCCccchHHHHHh-----ChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhccc-ccccccccchhhhhhc
Confidence 45799999999864 5788999999999 79999998888899999999987 665543 34432 222 22345
Q ss_pred hccccccccCChhHHHHHHHHHhhhCCCCchhh----------hhH---------------HHHHHHHHHHHcCCCCChh
Q 039939 77 LGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH---------------SFTINLMVKHLLSIEPEEP 131 (411)
Q Consensus 77 ~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~---------------~~~~~~~~~~~fG~~~~~~ 131 (411)
+|..+++..||+.|+++|+++++.|+.+++... +++ .+++++++.+ ||.+.++.
T Consensus 78 ~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~-~G~~~~~~ 156 (415)
T 3awm_A 78 LGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAW-AGVPLPDD 156 (415)
T ss_dssp SCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHH-HTCCCCGG
T ss_pred cCCcceeecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHH-cCCCCCcc
Confidence 665678899999999999999999998776651 111 1888999988 79988764
Q ss_pred HHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCHHH
Q 039939 132 IAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSEEE 206 (411)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~ 206 (411)
...++.+.+..+...+ +.. ....++..++...+.+++.++++++++........|+++.+++.. .++++
T Consensus 157 ~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~g~~~~~~- 230 (415)
T 3awm_A 157 EAGNRAGELRALFDAA---GSA--SPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPH- 230 (415)
T ss_dssp GHHHHHHHHHHHHHST---TCS--SHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTTSHHHHHHHCBCTTSCBCCHH-
T ss_pred hHHHHHHHHHHHHHHh---ccc--CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHhhhhccCCCCCHH-
Confidence 4444444444443322 111 223455667788889999999998876532234568999998652 36776
Q ss_pred HHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCC
Q 039939 207 TVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVV 285 (411)
Q Consensus 207 ~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~ 285 (411)
++..++..++ ||++||+ +++|++++|++||++|+++++| ++||+|+|+|+||++|++
T Consensus 231 ~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------------------~~~l~a~i~E~lRl~p~~ 288 (415)
T 3awm_A 231 VAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------------------PDYAELFVQEVRRFYPFF 288 (415)
T ss_dssp HHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------------------TTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------------------HHHHHHHHHHHhhcCCCc
Confidence 7877777665 8999999 9999999999999999999986 489999999999999999
Q ss_pred cccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCC----CCCCccHHHH
Q 039939 286 KFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGG----PRLCPGAELA 361 (411)
Q Consensus 286 ~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G----~r~C~G~~la 361 (411)
+.++|++.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.+ .....++|||+| +|.|+|++||
T Consensus 289 ~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~-~~~~~~~~FG~G~r~~~r~C~G~~lA 367 (415)
T 3awm_A 289 PAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD-EDSFNFIPQGGGDHYLGHRCPGEWIV 367 (415)
T ss_dssp CEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC-CCSSSCCTTCCSCTTTSCCCTTHHHH
T ss_pred cccceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC-CCCCCccCCCCCCCCCCCcCchHHHH
Confidence 99899999999999999999999999999999999999999999999998754 245689999999 5999999999
Q ss_pred HHHHHHHHHHHHHhCeEEecCCCCccc--cccccccCCceEEEEeCCC
Q 039939 362 KVEISFFLHHLVLNYRWKTQADDYPIA--YPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 362 ~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~v~~~~r~~ 407 (411)
++|++++++.|+++|++++.+++.... .....+++++.|++++..|
T Consensus 368 ~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 415 (415)
T 3awm_A 368 LAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHIGG 415 (415)
T ss_dssp HHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEESCC
T ss_pred HHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeCCC
Confidence 999999999999999999876543222 2234677799999987654
No 27
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=6e-62 Score=454.18 Aligned_cols=350 Identities=18% Similarity=0.150 Sum_probs=275.9
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccC--ChhHHhhhcc
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY--PKPMHGILGK 79 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~--~~~~~~~~g~ 79 (411)
.+|++||++++.. +++.++.+++++||||++ ++++.++++++||+++++++.++ .|+++. ......++|
T Consensus 6 ~~p~iGnl~~~~~-----~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g- 76 (389)
T 1n97_A 6 LREAWPYLKDLQQ-----DPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG- 76 (389)
T ss_dssp HHHHHHHHHHHHH-----CHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC-
T ss_pred cccccccHHHHhh-----ChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC-
Confidence 3799999999853 578899999999999999 88888999999999999999876 555443 223344555
Q ss_pred ccccccCChhHHHHHHHHHhhhCCCCchhh----------h--------------hHHHHHHHHHHHHcCCCCChhHHHH
Q 039939 80 LSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------F--------------LHSFTINLMVKHLLSIEPEEPIAFK 135 (411)
Q Consensus 80 ~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~--------------~~~~~~~~~~~~~fG~~~~~~~~~~ 135 (411)
.++++.+|+.|+++|++++++|+.+++... + +..+++++++.++||.+.++ +
T Consensus 77 ~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~----~ 152 (389)
T 1n97_A 77 RGLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSP----S 152 (389)
T ss_dssp SSTTTCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCH----H
T ss_pred CccccCCcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcchH----H
Confidence 678889999999999999999988665540 0 11189999999999998873 3
Q ss_pred HHHHHHHHHhhhc--ccC--ccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccCCCCHHHHHHHH
Q 039939 136 ILEDFQTFMKGFV--SLP--VYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKRSLSEEETVSIV 211 (411)
Q Consensus 136 ~~~~~~~~~~~~~--~~p--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~ 211 (411)
+.+.+..+..... .++ .++|....++..++.+.+.+++.+.++++ ++ ..++++ ++..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r---------------ll--~~l~~~-~l~~~ 214 (389)
T 1n97_A 153 LAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHP---------------PL--SHLPRE-RALSE 214 (389)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTST---------------TG--GGSCHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH---------------hc--ccCCHH-HHHHH
Confidence 3333333322111 011 23443223333444444444444433322 22 348888 99999
Q ss_pred HHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccce
Q 039939 212 LDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHR 290 (411)
Q Consensus 212 ~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R 290 (411)
+..+++||+|||+ +++|++++|++||++|+++++|++.+. |||+|+||++|+++.++|
T Consensus 215 ~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~---------------------a~i~E~lRl~p~~~~~~R 273 (389)
T 1n97_A 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------------------AAFQEALRLYPPAWILTR 273 (389)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH---------------------HHHHHHHHHSCSSCCEEE
T ss_pred HHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---------------------HHHHHHHhcCCCccccce
Confidence 9999999999999 999999999999999999999998763 999999999999999899
Q ss_pred eeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHH
Q 039939 291 EAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLH 370 (411)
Q Consensus 291 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~ 370 (411)
++.+|++++||.||||+.|+++.+++||| +|+||++|+||||+++.......++|||+|+|.|||++||++|++++++
T Consensus 274 ~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la 351 (389)
T 1n97_A 274 RLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLR 351 (389)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCCCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHH
T ss_pred eeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCCCCCCCCccCCCCCCCCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 9999999999999865333556899999999999999999999999999
Q ss_pred HHHHhCeEEecCCCCccccccccccCCceEEEEeC
Q 039939 371 HLVLNYRWKTQADDYPIAYPYVEFRRGLLLEIERT 405 (411)
Q Consensus 371 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~v~~~~r 405 (411)
.|+++|++++.++..+....+..++++++|++++|
T Consensus 352 ~ll~~f~~~~~~~~~~~~~~~~~p~~~~~v~~~~~ 386 (389)
T 1n97_A 352 AFFRRFRLDPLPFPRVLAQVTLRPEGGLPARPREE 386 (389)
T ss_dssp HHHTTCBCCCCCCCCEEESSSEEETTCCEECCBC-
T ss_pred HHHHhceEEeCCCCcccceEEeeeCCCceEEEeec
Confidence 99999999987655442223456666899998876
No 28
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=1e-60 Score=461.06 Aligned_cols=390 Identities=18% Similarity=0.194 Sum_probs=274.6
Q ss_pred CcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCc--cccccCChhHHhhhccc
Q 039939 3 WPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEK--YFQASYPKPMHGILGKL 80 (411)
Q Consensus 3 ~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~--~~~~~~~~~~~~~~g~~ 80 (411)
+|++||++++.. +++.++.+|+++|||||++++++.+++|++||+++++++.++.. .+.......+...+| .
T Consensus 27 ~P~iG~~~~~~~-----~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g-~ 100 (498)
T 3b6h_A 27 IPWLGYALDFGK-----DAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFD-V 100 (498)
T ss_dssp STTTBTHHHHHH-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHHHTSC-C
T ss_pred CcchhhHHHhcc-----CHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHHHHcC-C
Confidence 899999999864 57889999999999999999999999999999999999987653 333332233444555 4
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCchhh----------hh--------------------HHHHHHHHHHHHcCCCCCh
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FL--------------------HSFTINLMVKHLLSIEPEE 130 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~--------------------~~~~~~~~~~~~fG~~~~~ 130 (411)
+++..+++.|+ ++..+.|+.+++... .+ ..+++++++.++||...+.
T Consensus 101 ~~~~~~~~~~r---r~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~fG~~~~~ 177 (498)
T 3b6h_A 101 QLPHYSPSDEK---ARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALP 177 (498)
T ss_dssp CCTTCCHHHHH---HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHHCBSCSS
T ss_pred CccccCHHHHH---HHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhhcCccccc
Confidence 55566777764 445556655443320 00 0155556666679986532
Q ss_pred h---H----HHHHHHHHHHHHhhhcccCc----cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc
Q 039939 131 P---I----AFKILEDFQTFMKGFVSLPV----YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK 199 (411)
Q Consensus 131 ~---~----~~~~~~~~~~~~~~~~~~p~----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~ 199 (411)
. . ...+.+.+..+......+|. +++....++..++.+.+.+. +++++.+.. ....|+++.+++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~l~~ll~~ 252 (498)
T 3b6h_A 178 RTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKL---LSPARLARR--AHRSKWLESYLLH 252 (498)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH---TCHHHHTTC--BSCCHHHHHHHHH
T ss_pred ccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHH---HHHHHHhcc--ccHHHHHHHHHHH
Confidence 1 1 11111111111111112231 12211111223333333222 222332222 3456899888753
Q ss_pred C----CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCC----CCCChhhhccChh
Q 039939 200 R----SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDE----EPLNWEDYQQMEF 270 (411)
Q Consensus 200 ~----~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~----~~~~~~~~~~l~~ 270 (411)
. .++++ ++. .++.+++||++||+ +++|++++|++||++|+++++|++++++.++.. ..++.+++.+|||
T Consensus 253 ~~~~~~~~~~-~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~l~~lpy 330 (498)
T 3b6h_A 253 LEEMGVSEEM-QAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPV 330 (498)
T ss_dssp HHHTTCCHHH-HHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTHHHHSCHH
T ss_pred HHhCCCCHHH-HHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHHHHhcCHH
Confidence 2 34555 777 77778889999999 999999999999999999999999998754211 1369999999999
Q ss_pred HHHHHHHhhcCCCCCcccceeecccccc-----CCEEeCCCcEEecchhh-hccCCCCCCCCCCCCCCCCCCCccC----
Q 039939 271 TNNVILEAMRCGNVVKFVHREAIRDVKF-----KEYLIPSGWKVLPVFTA-AHFDLNLHENPSEFNPSRWTDKASV---- 340 (411)
Q Consensus 271 l~a~i~E~lRl~p~~~~~~R~~~~d~~l-----~g~~ip~G~~v~~~~~~-~~~d~~~~~dp~~F~P~Rfl~~~~~---- 340 (411)
|+|||+|+||++|+ +.++|.+.+|+++ +||.|||||.|+++.++ +||||++|+||++|+||||++++..
T Consensus 331 l~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~ 409 (498)
T 3b6h_A 331 LDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKD 409 (498)
T ss_dssp HHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSSBCCC
T ss_pred HHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhhcCcccccCCCcccccc
Confidence 99999999999975 6788999999998 68999999999999999 9999999999999999999975421
Q ss_pred -------CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCC--Cccc----c-c-cccccCCceEEEEeC
Q 039939 341 -------ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADD--YPIA----Y-P-YVEFRRGLLLEIERT 405 (411)
Q Consensus 341 -------~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~--~~~~----~-~-~~~~~~~~~v~~~~r 405 (411)
.+..++|||+|+|.|||++||++|++++++.||++|++++.++. .+.. . . +..++.++.|++++|
T Consensus 410 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 489 (498)
T 3b6h_A 410 FYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR 489 (498)
T ss_dssp CEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCEEEEEEC
T ss_pred cccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCccEEEEec
Confidence 25689999999999999999999999999999999999997653 1211 1 1 235556899999998
Q ss_pred CCCC
Q 039939 406 NGFD 409 (411)
Q Consensus 406 ~~~~ 409 (411)
.-.-
T Consensus 490 ~~~~ 493 (498)
T 3b6h_A 490 PHHH 493 (498)
T ss_dssp CC--
T ss_pred cccc
Confidence 7543
No 29
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=4.5e-61 Score=460.93 Aligned_cols=380 Identities=17% Similarity=0.220 Sum_probs=264.1
Q ss_pred CcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCc-cccccCChhHHhhhcccc
Q 039939 3 WPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEK-YFQASYPKPMHGILGKLS 81 (411)
Q Consensus 3 ~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~-~~~~~~~~~~~~~~g~~~ 81 (411)
+|++||++++.+ +++.++.+++++|||||++++++.+++++++|+++++++.++.. .+.......+...+| .+
T Consensus 27 ~P~iG~~~~~~~-----~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~g-~~ 100 (475)
T 3b98_A 27 IPWLGHALEFGK-----DAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSYAQVLMKRIFN-MI 100 (475)
T ss_dssp STTTBTHHHHHH-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHHHHHHHHHTTC-CC
T ss_pred cchHHhHHHHhh-----CHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcccCCchHHHHHHHHHHhC-CC
Confidence 899999999853 57889999999999999999999999999999999999987642 222222223344555 45
Q ss_pred ccccCChhHHHHHHHHHhhhCCCCchhh---h------------------------hHH----HHHHHHHHHHcCCCCCh
Q 039939 82 LLTVSGDLHKKLRNVAVSFIGASKSTPA---F------------------------LHS----FTINLMVKHLLSIEPEE 130 (411)
Q Consensus 82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~---~------------------------~~~----~~~~~~~~~~fG~~~~~ 130 (411)
++..+++.| |+++++.|+.+++... + +.. +++++++...||.+.+.
T Consensus 101 ~~~~~~~~~---R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 177 (475)
T 3b98_A 101 LPSHNPESE---KKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNN 177 (475)
T ss_dssp CTTCCHHHH---HHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHHCCTTSC
T ss_pred CCCCChHHH---HHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhheeCCcccc
Confidence 666777765 4566666665444320 0 111 44455555567754322
Q ss_pred -hHHHHHHHHHHHHHhhhcccCc----cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc----CC
Q 039939 131 -PIAFKILEDFQTFMKGFVSLPV----YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK----RS 201 (411)
Q Consensus 131 -~~~~~~~~~~~~~~~~~~~~p~----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~----~~ 201 (411)
.....+.+.+..+.. .+|+ +++....++..++. +.+.+.+.+..... .....|+++.+++. ..
T Consensus 178 ~~~~~~~~~~~~~~~~---~~p~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~ 249 (475)
T 3b98_A 178 SAALTQIYEEFRRFDK---LLPKLARTTVNKEEKQIASAAR----EKLWKWLTPSGLDR-KPREQSWLGSYVKQLQDEGI 249 (475)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHTTCCCHHHHHHHHHHH----HHHHHHHSCTTSCC-CCCTTSHHHHHHHHHHHTTC
T ss_pred chhcHHHHHHHHHHHh---hhHHHHHHhcChhhhHHHHHHH----HHHHHHHHHHHhhc-cccccHHHHHHHHHHHHcCC
Confidence 122333333332211 1221 12211111222222 22222222111111 13457899988753 23
Q ss_pred CCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhc
Q 039939 202 LSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMR 280 (411)
Q Consensus 202 ~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR 280 (411)
++++ ++. .+..+++||++||+ +++|++++|++||++|+++++|++. + ...++.+++.+||||+|||+|+||
T Consensus 250 ~~~~-~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~--~----~~~~~~~~~~~lpyl~a~i~E~lR 321 (475)
T 3b98_A 250 DAEM-QRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--G----KHLRLEERQKNTPVFDSVLWETLR 321 (475)
T ss_dssp CHHH-HHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------------CCHHHHHHHHHHHH
T ss_pred CHHH-HHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--C----CCCCCHHHHhcCHHHHHHHHHHHh
Confidence 5555 787 88889999999999 9999999999999999999999982 2 134689999999999999999999
Q ss_pred CCCCCcccceeecccccc-----CCEEeCCCcEEecchhh-hccCCCCCCCCCCCCCCCCCCCcc-----------CCCC
Q 039939 281 CGNVVKFVHREAIRDVKF-----KEYLIPSGWKVLPVFTA-AHFDLNLHENPSEFNPSRWTDKAS-----------VISK 343 (411)
Q Consensus 281 l~p~~~~~~R~~~~d~~l-----~g~~ip~G~~v~~~~~~-~~~d~~~~~dp~~F~P~Rfl~~~~-----------~~~~ 343 (411)
++|+ +.++|.+.+|+++ +||.||||+.|+++.++ +||||++|+||++|+||||++++. ....
T Consensus 322 l~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~ 400 (475)
T 3b98_A 322 LTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKY 400 (475)
T ss_dssp HHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCBCCCCBSSSCBCSC
T ss_pred cCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCcccccccccccccc
Confidence 9986 7788999999999 88999999999999999 999999999999999999997542 1246
Q ss_pred ceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecCCC--Cccc----cc--cccccCCceEEEEeCCCC
Q 039939 344 RVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQADD--YPIA----YP--YVEFRRGLLLEIERTNGF 408 (411)
Q Consensus 344 ~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~--~~~~----~~--~~~~~~~~~v~~~~r~~~ 408 (411)
.++|||+|+|.|||++||++|++++++.|+++|++++.++. .+.. .. +..++.++.|++++|+++
T Consensus 401 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R~~~ 473 (475)
T 3b98_A 401 PSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRFHH 473 (475)
T ss_dssp SCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC---
T ss_pred CccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEecccc
Confidence 89999999999999999999999999999999999997653 1211 11 234556899999999764
No 30
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=2.6e-59 Score=438.87 Aligned_cols=349 Identities=16% Similarity=0.237 Sum_probs=275.9
Q ss_pred CCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-------hhHHhhhccccccccCChhHH
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-------KPMHGILGKLSLLTVSGDLHK 91 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-------~~~~~~~g~~~l~~~~g~~~~ 91 (411)
.+|+.++.++ ++||||+++++++.+++++++++++++++.++ ..++++.. ......++ .+++..+|+.|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQN-QMMLFQNQPDHR 89 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHH-TSGGGCCTTHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhh-cchhhcCCchHH
Confidence 4788899888 58999999999999999999999999999877 45554432 12233344 688899999999
Q ss_pred HHHHHHHhhhCCCCchhh--hhHH------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHh
Q 039939 92 KLRNVAVSFIGASKSTPA--FLHS------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMK 145 (411)
Q Consensus 92 ~~R~~~~~~~~~~~l~~~--~~~~------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~ 145 (411)
++|++++++|++++++.. .+.+ ++.++++. +||.+.++ ...+.+....+..
T Consensus 90 ~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~~~~ 166 (404)
T 3ejb_B 90 RLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIAN-IIGVPEED--REQLKEWAASLIQ 166 (404)
T ss_dssp HHHHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHH-HHTCCGGG--HHHHHHHHHHHHG
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHHH
Confidence 999999999998766540 0111 66777777 47877653 2233333333222
Q ss_pred hhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC---CCCHHHHHHHHHHHHHhcchHH
Q 039939 146 GFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR---SLSEEETVSIVLDIMLGGYETT 222 (411)
Q Consensus 146 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~~~~~~~~~~~ag~~t 222 (411)
. ...|. .....++..++...+.+++.+.++++++.. ..|+++.++... .++++ ++..++..+++||+||
T Consensus 167 ~-~~~p~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~ls~~-el~~~~~~l~~AG~dT 238 (404)
T 3ejb_B 167 T-IDFTR--SRKALTEGNIMAVQAMAYFKELIQKRKRHP----QQDMISMLLKGREKDKLTEE-EAASTCILLAIAGHET 238 (404)
T ss_dssp G-GSTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHC----CCCHH-HHHHHHHHHHHHHHHH
T ss_pred h-ccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----cchHHHHHHhcccCCCCCHH-HHHHHHHHHHHcchHH
Confidence 2 12221 111335566777888889999998887544 679999999322 58888 9999999999999999
Q ss_pred HH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCE
Q 039939 223 AT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEY 301 (411)
Q Consensus 223 t~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~ 301 (411)
|+ +++|++++|++||++|+++++|++ ||+|+|+|+||++|+++.++|++.+|++++||
T Consensus 239 ta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~ 297 (404)
T 3ejb_B 239 TVNLISNSVLCLLQHPEQLLKLRENPD---------------------LIGTAVEECLRYESPTQMTARVASEDIDICGV 297 (404)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSBCEEEEEESSCEEETTE
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCcccccceEeCCCeEECCE
Confidence 99 999999999999999999999853 68999999999999999989999999999999
Q ss_pred EeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEe
Q 039939 302 LIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKT 380 (411)
Q Consensus 302 ~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~ 380 (411)
.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|||++||++|++++++.|+++| ++++
T Consensus 298 ~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~-------~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l 370 (404)
T 3ejb_B 298 TIRQGEQVYLLLGAANRDPSIFTNPDVFDITRS-------PNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNL 370 (404)
T ss_dssp EECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCS-------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EECCCCEEEecHHHhCCChhhCCCcceeCCCCC-------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCccccc
Confidence 999999999999999999999999999999998 34689999999999999999999999999999999 8999
Q ss_pred cCCC-CccccccccccCCceEEEEeCCCCC
Q 039939 381 QADD-YPIAYPYVEFRRGLLLEIERTNGFD 409 (411)
Q Consensus 381 ~~~~-~~~~~~~~~~~~~~~v~~~~r~~~~ 409 (411)
.+++ .......+..+..++|++++|.+++
T Consensus 371 ~~~~~~~~~~~~~~~~~~lpv~~~~~~~~p 400 (404)
T 3ejb_B 371 ADFEWRYRPLFGFRALEELPVTFEASWSHP 400 (404)
T ss_dssp C--CCCBCSCSSBCCBSCCEEECC------
T ss_pred CCCCceeccCcccCCcceeEEEEeccccCc
Confidence 8543 2333455788889999999998765
No 31
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=2.7e-59 Score=441.97 Aligned_cols=352 Identities=17% Similarity=0.211 Sum_probs=275.8
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccCC----hhH--
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYP----KPM-- 73 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~----~~~-- 73 (411)
+|+|++||+...+. .+++.++.++ ++|||||++++ ++.++++++||+++++++.++ .|+++.. ...
T Consensus 32 ~~~p~lG~~~~~~~----~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~ 104 (436)
T 2cd8_A 32 PPVLDLGALGQDFA----ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLTEA 104 (436)
T ss_dssp --CCBHHHHHHHHH----HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCCTT
T ss_pred CccccCCCCCcccc----cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccccccc
Confidence 46999999863322 3678899999 89999999998 778899999999999999876 3443321 100
Q ss_pred HhhhccccccccCChhHHHHHHHHHhhhCCCCchh----------hhh---H---------------HHHHHHHHHHHcC
Q 039939 74 HGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTP----------AFL---H---------------SFTINLMVKHLLS 125 (411)
Q Consensus 74 ~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~----------~~~---~---------------~~~~~~~~~~~fG 125 (411)
...++ .++++.+|+.|+++|++++++|+.+++.. .++ . .+++++++. +||
T Consensus 105 ~~~~~-~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi~~-~~G 182 (436)
T 2cd8_A 105 EAALN-HNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISE-LLG 182 (436)
T ss_dssp GGGTC-CSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred ccccc-ccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHH-HhC
Confidence 02233 67888999999999999999998775543 000 0 167778876 688
Q ss_pred CCCChhHHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc-----C
Q 039939 126 IEPEEPIAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK-----R 200 (411)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~-----~ 200 (411)
.+.++ ...+.+.+..+.. .. + .++..++...+.+++.+++++++++. ..|+++.+++. .
T Consensus 183 ~~~~~--~~~~~~~~~~~~~----~~---~---~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~ 246 (436)
T 2cd8_A 183 VPEPD--RAAFRVWTDAFVF----PD---D---PAQAQTAMAEMSGYLSRLIDSKRGQD----GEDLLSALVRTSDEDGS 246 (436)
T ss_dssp CCGGG--HHHHHHHHHHHHS----CS---S---TTHHHHHHHHHHHHHHHHHHHHTTSC----CCSHHHHHHHHHHHCTT
T ss_pred CCHHH--HHHHHHHHHHHhc----cC---C---HHHHHHHHHHHHHHHHHHHHHHhcCC----CCCHHHHHHHhhhccCC
Confidence 87643 2233333333222 11 1 14556777888899999998887543 57899999863 3
Q ss_pred CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhh
Q 039939 201 SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAM 279 (411)
Q Consensus 201 ~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 279 (411)
.++++ ++..++..+++||+|||+ +++|++++|++||++|+++++|+ +||+|||+|+|
T Consensus 247 ~ls~~-ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~l 304 (436)
T 2cd8_A 247 RLTSE-ELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM---------------------TLLDGAVEEML 304 (436)
T ss_dssp TSCHH-HHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHH
T ss_pred CCCHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh---------------------hhHHHHHHHHH
Confidence 58888 999999999999999999 99999999999999999999884 37899999999
Q ss_pred cCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccH
Q 039939 280 RCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGA 358 (411)
Q Consensus 280 Rl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~ 358 (411)
|++|+++ .++|++.+|++++||.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|+|+
T Consensus 305 Rl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-------~~~~~pFG~G~r~C~G~ 377 (436)
T 2cd8_A 305 RYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRD-------TAGHLAFGHGIHFCIGA 377 (436)
T ss_dssp HHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSC-------CTTCCTTCCSTTCCTTH
T ss_pred HhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCC-------CCCCCCCCCCCCCCcCH
Confidence 9999999 789999999999999999999999999999999999999999999995 25799999999999999
Q ss_pred HHHHHHHHHHHHHHHHhC-eEEecCC-CCcc--ccccccccCCceEEEEeCC
Q 039939 359 ELAKVEISFFLHHLVLNY-RWKTQAD-DYPI--AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 359 ~la~~~~~~~l~~ll~~f-~~~~~~~-~~~~--~~~~~~~~~~~~v~~~~r~ 406 (411)
+||++|++++++.|+++| ++++..+ +... ...++..+.+++|++++|+
T Consensus 378 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~ 429 (436)
T 2cd8_A 378 PLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGR 429 (436)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC-----
T ss_pred HHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCc
Confidence 999999999999999999 5988633 2222 2234567889999999986
No 32
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=1.8e-59 Score=443.62 Aligned_cols=350 Identities=19% Similarity=0.222 Sum_probs=270.2
Q ss_pred CCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHhhhccccccccCChhHHHHHHH
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHGILGKLSLLTVSGDLHKKLRNV 96 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~~~g~~~l~~~~g~~~~~~R~~ 96 (411)
..+|+.++.++ ++||||+++..++ .++|++|++++++|.++.. |++.... .....+|..+++..+|+.|+++|++
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~ 127 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI 127 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSCC-------------CCHHH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccccCCCccccCCcHHHHHHHHH
Confidence 34788888877 5899999987665 8999999999999987754 6554322 1223445446888999999999999
Q ss_pred HHhhhCCCCchhhhhHH----------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhc
Q 039939 97 AVSFIGASKSTPAFLHS----------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFV 148 (411)
Q Consensus 97 ~~~~~~~~~l~~~~~~~----------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 148 (411)
+++.|+.+++.. +.. +++++++. +||.+.++ ...+.+....+...+.
T Consensus 128 ~~~~fs~~~l~~--~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~~~~~~~~~~ 202 (441)
T 3nc3_A 128 VVRSFIGDALDH--LSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMD-MLGLDKRD--HEKISEWHSGVADFIT 202 (441)
T ss_dssp HHHHHHHTHHHH--HHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHH-HTTCCGGG--HHHHHHHHHHHHHHHH
T ss_pred HHhhcCHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHHHhcc
Confidence 999999988776 221 77788887 58987653 2333333333333222
Q ss_pred ccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHHHH
Q 039939 149 SLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETTAT 224 (411)
Q Consensus 149 ~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt~ 224 (411)
.+ ..+........++...+.+++.++++++++++ .+|+++.|++.. .++++ ++..++..+++||+|||+
T Consensus 203 ~~--~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~----~~Dll~~Ll~~~~~~~~ls~~-el~~~~~~ll~AG~eTTa 275 (441)
T 3nc3_A 203 SI--SQSPEARAHSLWCSEQLSQYLMPVIKERRVNP----GSDLISILCTSEYEGMALSDK-DILALILNVLLAATEPAD 275 (441)
T ss_dssp CS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSC----CSSHHHHHCC------CCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred cc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhccCCCCCHH-HHHHHHHHHHHhhhHHHH
Confidence 11 11222235566777888899999999887544 679999999754 48888 999999999999999999
Q ss_pred -HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEe
Q 039939 225 -LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLI 303 (411)
Q Consensus 225 -~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~i 303 (411)
+++|++++|++||++|+++++|+ +||+++|+|+||++|+++.++|++++|++++||.|
T Consensus 276 ~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~I 334 (441)
T 3nc3_A 276 KTLALMIYHLLNNPEQMNDVLADR---------------------SLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEI 334 (441)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEESSSCEE
T ss_pred HHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHhhhcCCcccCccEEECCCEEECCEEE
Confidence 99999999999999999999874 68999999999999999999999999999999999
Q ss_pred CCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccC---CCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEE
Q 039939 304 PSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASV---ISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWK 379 (411)
Q Consensus 304 p~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~---~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~ 379 (411)
|||+.|+++.+++||||++|+||++|+||||+.+... ....++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus 335 p~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~ 414 (441)
T 3nc3_A 335 KKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIR 414 (441)
T ss_dssp CTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred CCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccE
Confidence 9999999999999999999999999999999876521 267899999999999999999999999999999999 899
Q ss_pred ecCCCC-ccccccccccCCceEEEEe
Q 039939 380 TQADDY-PIAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 380 ~~~~~~-~~~~~~~~~~~~~~v~~~~ 404 (411)
+.+++. .....++..+..++|++++
T Consensus 415 l~~~~~~~~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 415 LEEDFCYAESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp ECTTCCCCEECSSBCEESCCEEECC-
T ss_pred ECCCCcccccCccccCcceeEEEEec
Confidence 986543 2334567778899998864
No 33
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=1.6e-58 Score=432.29 Aligned_cols=342 Identities=17% Similarity=0.164 Sum_probs=279.6
Q ss_pred CCCCCchhHHHHHhhhh--ccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh--HHhhhccccccccCChhHH
Q 039939 16 HKSNSTGSFLQQHCSIY--GQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--MHGILGKLSLLTVSGDLHK 91 (411)
Q Consensus 16 ~~~~~~~~~l~~~~~~y--G~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--~~~~~g~~~l~~~~g~~~~ 91 (411)
....+|+.++.+|+++| |||+++.+++ +.++|++++++++++++. ..|+++.... .....+..+++..+|+.|+
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 93 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHK 93 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHH
Confidence 45568999999999999 9999999886 599999999999999544 4555432211 1122233567888999999
Q ss_pred HHHHHHHhhhCCCCchhh--hhHH------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHh
Q 039939 92 KLRNVAVSFIGASKSTPA--FLHS------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMK 145 (411)
Q Consensus 92 ~~R~~~~~~~~~~~l~~~--~~~~------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~ 145 (411)
++|+++++.|+.+++... .+.+ +++++++. +||.+.++ ...+.+.+..+..
T Consensus 94 ~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~~~~ 170 (398)
T 4fb2_A 94 KYRQLVAKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAI-LLGLPPED--GDTYRRWVWAITH 170 (398)
T ss_dssp HHHHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHH-HTTSCGGG--HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHhc
Confidence 999999999998766540 0111 88888888 68987643 3344444443332
Q ss_pred hhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchH
Q 039939 146 GFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYET 221 (411)
Q Consensus 146 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~ 221 (411)
. ....+..++...+.+++.+.+++++++. ..|+++.+++.. .++.+ ++..++..+++||+|
T Consensus 171 ~----------~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~l~~~-~i~~~~~~l~~AG~~ 235 (398)
T 4fb2_A 171 V----------ENPEEGAEIFAELVAHARTLIAERRTNP----GNDIMSRVIMSKIDGESLSED-DLIGFFTILLLGGID 235 (398)
T ss_dssp C----------CCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCBTTBCCCHH-HHHHHHHHCCCCCCH
T ss_pred C----------CCHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHcccCCCCCCHH-HHHHHHHHHHHHhhH
Confidence 1 1224667788889999999999887654 679999999764 38888 999999999999999
Q ss_pred HHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCC
Q 039939 222 TAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKE 300 (411)
Q Consensus 222 tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g 300 (411)
||+ +++|++++|++||++|+++++|++ |++|||+|+||++|+++ ++|.+.+|++++|
T Consensus 236 Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~-~~R~~~~d~~l~g 293 (398)
T 4fb2_A 236 NTARFLSSVFWRLAWDIELRRRLIAHPE---------------------LIPNAVDELLRFYGPAM-VGRLVTQEVTVGD 293 (398)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHHCCBC-EEEEECSCEEETT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCCcC-CCeeeCCCEEECC
Confidence 999 999999999999999999999964 57899999999999999 9999999999999
Q ss_pred EEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEE
Q 039939 301 YLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWK 379 (411)
Q Consensus 301 ~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~ 379 (411)
|.||||+.|+++.+++||||++|+||++|+|||| ...++|||+|+|.|||++||++|++++++.|+++| +++
T Consensus 294 ~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~ 366 (398)
T 4fb2_A 294 ITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERT-------PNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFS 366 (398)
T ss_dssp EEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC-------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred EEECCCCEEEechHhhcCChhhCCCcCeeCCCCC-------CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcE
Confidence 9999999999999999999999999999999997 45789999999999999999999999999999999 999
Q ss_pred ecCCCCcc-ccccccccCCceEEEEeCC
Q 039939 380 TQADDYPI-AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 380 ~~~~~~~~-~~~~~~~~~~~~v~~~~r~ 406 (411)
++++..+. ....+..+..++|+++++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 394 (398)
T 4fb2_A 367 LDPNKECEWLMGQVAGMLHVPIIFPKGK 394 (398)
T ss_dssp ECTTSCCEEECSSBCEEEECEEECCCCC
T ss_pred ECCCCCceeccccccccceeEEEEcCCC
Confidence 98765433 2344566677999998874
No 34
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=2.4e-58 Score=432.26 Aligned_cols=344 Identities=16% Similarity=0.178 Sum_probs=276.6
Q ss_pred CCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh--------HHhhhccccccccCChh
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--------MHGILGKLSLLTVSGDL 89 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--------~~~~~g~~~l~~~~g~~ 89 (411)
..+|+.++.++ ++||||+++++++.+++++++++++++++.++. |+++.... .... ...+++..+|+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPAT-PTPMMILMDPPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSC-SSCCGGGCCTTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcc-cccccccCCchH
Confidence 35789999999 899999999999889999999999999998763 55432111 1111 235788899999
Q ss_pred HHHHHHHHHhhhCCCCchhh----------hhHH----------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHH
Q 039939 90 HKKLRNVAVSFIGASKSTPA----------FLHS----------------FTINLMVKHLLSIEPEEPIAFKILEDFQTF 143 (411)
Q Consensus 90 ~~~~R~~~~~~~~~~~l~~~----------~~~~----------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~ 143 (411)
|+++|+++++.|+.+++... +++. +++++++.+ ||.+.++ ...+.+....+
T Consensus 95 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~ 171 (411)
T 3a4g_A 95 HTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICEL-LGVPAED--RDDFSAWSSVL 171 (411)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHH-HTCCGGG--HHHHHHHHHHH
T ss_pred HHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHH-hCCCHHH--HHHHHHHHHHH
Confidence 99999999999998766540 1110 778888864 8987653 22333333332
Q ss_pred HhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC-----CCCHHHHHHHHHHHHHhc
Q 039939 144 MKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-----SLSEEETVSIVLDIMLGG 218 (411)
Q Consensus 144 ~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~~~~~~~~~~~~a 218 (411)
... .| | .+..++...+.+++.++++++++.. ..|+++.+++.. .++++ ++..++..+++|
T Consensus 172 ~~~---~p---~----~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~~ls~~-ei~~~~~~l~~A 236 (411)
T 3a4g_A 172 VDD---SP---A----DDKNAAMGKLHGYLSDLLERKRTEP----DDALLSSLLAVSDEDGDRLSQE-ELVAMAMLLLIA 236 (411)
T ss_dssp TTS---SC---T----TTHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCCTTCCCCCHH-HHHHHHHHHHHH
T ss_pred hcc---CC---H----HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhccCCCCCCHH-HHHHHHHHHHHh
Confidence 221 12 1 2455677888889999998887653 579999998643 48888 999999999999
Q ss_pred chHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-ccceeecccc
Q 039939 219 YETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FVHREAIRDV 296 (411)
Q Consensus 219 g~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~ 296 (411)
|+|||+ +++|++++|++||++|+++++|+ .||+|||+|+||++|+++ .++|++.+|+
T Consensus 237 G~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~ 295 (411)
T 3a4g_A 237 GHETTVNLIGNGVLALLTHPDQRKLLAEDP---------------------SLISSAVEEFLRFDSPVSQAPIRFTAEDV 295 (411)
T ss_dssp HSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHTCSBCBCCCEEESSCE
T ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHhcCH---------------------HHHHHHHHHHHHhcccccCCceeEeCCCE
Confidence 999999 99999999999999999999984 279999999999999999 7899999999
Q ss_pred ccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC
Q 039939 297 KFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY 376 (411)
Q Consensus 297 ~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f 376 (411)
+++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|||++||++|++++++.|+++|
T Consensus 296 ~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f 368 (411)
T 3a4g_A 296 TYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA-------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADR 368 (411)
T ss_dssp EETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC-------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred EECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC-------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999973 4689999999999999999999999999999999
Q ss_pred -eEEecCCC-Ccc--ccccccccCCceEEEEeCCCCCCC
Q 039939 377 -RWKTQADD-YPI--AYPYVEFRRGLLLEIERTNGFDDH 411 (411)
Q Consensus 377 -~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~r~~~~~~ 411 (411)
++++.++. ... ...++..+.+++|++.+|..-+-|
T Consensus 369 ~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~~~~~~ 407 (411)
T 3a4g_A 369 PELALAVGLDELVYRESTLVRGLSRMPVTMGPRSALEHH 407 (411)
T ss_dssp TTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCCC----
T ss_pred CCcEECCCccccccccCccccCcceeEEEecCcchhhcc
Confidence 69987532 222 233467788999999999887765
No 35
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=1.7e-58 Score=434.71 Aligned_cols=349 Identities=17% Similarity=0.205 Sum_probs=279.4
Q ss_pred CCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC---hhHH-----hhhc---cccccc
Q 039939 16 HKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP---KPMH-----GILG---KLSLLT 84 (411)
Q Consensus 16 ~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~---~~~~-----~~~g---~~~l~~ 84 (411)
....+|+.++.++ ++||||++ + ++.++++++++++++++|.++. |+++.. ..+. ..++ ..++++
T Consensus 23 ~~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (419)
T 1q5d_A 23 GYAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG 97 (419)
T ss_dssp TTTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT
T ss_pred hhhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc
Confidence 3446889999998 68999999 5 6789999999999999998764 665431 1111 1222 357888
Q ss_pred cCChhHHHHHHHHHhhhCCCCchhh----------hhHH----------------HHHHHHHHHHcCCCCChhHHHHHHH
Q 039939 85 VSGDLHKKLRNVAVSFIGASKSTPA----------FLHS----------------FTINLMVKHLLSIEPEEPIAFKILE 138 (411)
Q Consensus 85 ~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~~----------------~~~~~~~~~~fG~~~~~~~~~~~~~ 138 (411)
.+|+.|+++|++++++|+.+++... +++. +++++++.+ ||.+.++ ...+.+
T Consensus 98 ~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--~~~~~~ 174 (419)
T 1q5d_A 98 LPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISAL-LKVPAEC--DEKFRR 174 (419)
T ss_dssp SCHHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHH-TTCCGGG--HHHHHH
T ss_pred CCchHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-hCCCHHH--HHHHHH
Confidence 9999999999999999998766540 1110 788999988 9987653 223333
Q ss_pred HHHHHHhhhcccCccCCC--cccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC-chHHHHHcc----CCCCHHHHHHHH
Q 039939 139 DFQTFMKGFVSLPVYIPG--THYANAVKARARLSRTVREIVRERQHENMRAGEG-DFLDVILKK----RSLSEEETVSIV 211 (411)
Q Consensus 139 ~~~~~~~~~~~~p~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-d~l~~ll~~----~~~~~~~~~~~~ 211 (411)
....+..... +.++|. ...++..++...+.+++.+++++++++. .. |+++.+++. ..++++ ++..+
T Consensus 175 ~~~~~~~~~~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~~dll~~ll~~~~~~~~l~~~-ei~~~ 247 (419)
T 1q5d_A 175 FGSATARALG--VGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNP----LENDVLTMLLQAEADGSRLSTK-ELVAL 247 (419)
T ss_dssp HHHHHHHHTT--TTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSCHHHHHHHHHHSSTTCCHH-HHHHH
T ss_pred HHHHHHHhcc--cccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCCHHHHHHhhhccCCCCCHH-HHHHH
Confidence 3333332221 212221 2345667788888999999999887643 45 999999864 258888 99999
Q ss_pred HHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-ccc
Q 039939 212 LDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FVH 289 (411)
Q Consensus 212 ~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~ 289 (411)
+..+++||+|||+ +++|++++|++||++|+|+++|+ +||+|||+|+||++|+++ .++
T Consensus 248 ~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~ 306 (419)
T 1q5d_A 248 VGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP---------------------GLMRNALDEVLRFDNILRIGTV 306 (419)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBSSEEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHHHHhCCccccccc
Confidence 9999999999999 99999999999999999999983 379999999999999999 789
Q ss_pred eeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHH
Q 039939 290 REAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFL 369 (411)
Q Consensus 290 R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l 369 (411)
|++.+|++++||.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|+|++||++|+++++
T Consensus 307 R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-------~~~~l~FG~G~r~C~G~~lA~~e~~~~l 379 (419)
T 1q5d_A 307 RFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD-------TSASLAYGRGPHVCPGVSLARLEAEIAV 379 (419)
T ss_dssp EEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC-------CTTCCTTCCGGGCCTTHHHHHHHHHHHH
T ss_pred eeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC-------CCCCCCCCCCCCcCccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999994 2568999999999999999999999999
Q ss_pred HHHHHhC-eEEecCCCCccccccccccCCceEEEEeCCC
Q 039939 370 HHLVLNY-RWKTQADDYPIAYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 370 ~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 407 (411)
+.|+++| ++++.++.......++..+.+++|++++|..
T Consensus 380 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~~ 418 (419)
T 1q5d_A 380 GTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILKPSKA 418 (419)
T ss_dssp HHHHHHCTTCEECSCCEECCCSSBCCEEECEEESSCC--
T ss_pred HHHHHhCCCeEECCCcccccccccCCCceeEEEEecCCC
Confidence 9999999 7999876433334556778899999998863
No 36
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.3e-58 Score=428.33 Aligned_cols=343 Identities=16% Similarity=0.194 Sum_probs=277.4
Q ss_pred CCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhhhccccccccCChhHHHHHHHHH
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGILGKLSLLTVSGDLHKKLRNVAV 98 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~~~~~R~~~~ 98 (411)
.+|+.++.++++ |||||++. .+++++++|+++++++.++. .|+++........ +..++++.+|+.|+++|++++
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~-~~~~l~~~~g~~h~~~R~~~~ 91 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIRPDQP-ALPMMIDMDDPAHLLRRKLVN 91 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSSTTSC-CCSSGGGCCTTHHHHHHHHHG
T ss_pred cChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccCCccc-ccccccccCchHHHHHHHHhh
Confidence 578999999986 99999875 37999999999999998754 5554432111122 336788899999999999999
Q ss_pred hhhCCCCchhh--hh------------------------HHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcccCc
Q 039939 99 SFIGASKSTPA--FL------------------------HSFTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVSLPV 152 (411)
Q Consensus 99 ~~~~~~~l~~~--~~------------------------~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p~ 152 (411)
+.|+..++... .+ ..+++++++.+ ||.+.++ ...+.+....+.... .|.
T Consensus 92 ~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--~~~~~~~~~~~~~~~--~~~ 166 (398)
T 2xkr_A 92 AGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDM-LGVRPEQ--RDMFLRWSDDLVTFL--SSH 166 (398)
T ss_dssp GGSCHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHHHH--TSC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH--HHHHHHHHHHHHhcc--Ccc
Confidence 99988665440 00 01888999998 9988753 233333333333221 233
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHHHH-HHH
Q 039939 153 YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETTAT-LLA 227 (411)
Q Consensus 153 ~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt~-~l~ 227 (411)
++| ...++..++...+.+++.++++++++++ ..|+++.+++.. .++++ ++..++..+++||+|||+ +++
T Consensus 167 ~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~ls~~-ei~~~~~~l~~AG~eTt~~~l~ 240 (398)
T 2xkr_A 167 VSQ-EDFQITMDAFAAYNDFTRATIAARRADP----TDDLVSVLVSSEVDGERLSDD-ELVMETLLILIGGDETTRHTLS 240 (398)
T ss_dssp CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCBTTBCCCHH-HHHHHHHHHHHHHSHHHHHHHH
T ss_pred cch-hhHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhccCCCCCHH-HHHHHHHHHHHHhhHHHHHHHH
Confidence 333 2334566777888899999998887643 579999999763 48888 999999999999999999 999
Q ss_pred HHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCc
Q 039939 228 LIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGW 307 (411)
Q Consensus 228 ~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~ 307 (411)
|++++|++||++|+++++|++ ||+|||+|+||++|+++.++|.+.+|++++||.||||+
T Consensus 241 ~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt 299 (398)
T 2xkr_A 241 GGTEQLLRNRDQWDLLQRDPS---------------------LLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGE 299 (398)
T ss_dssp HHHHHHHHSHHHHHHHHHCGG---------------------GHHHHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTC
T ss_pred HHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhcccccCcceEECCCeeECCEEECCCC
Confidence 999999999999999999953 78999999999999999999999999999999999999
Q ss_pred EEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEecCCCCc
Q 039939 308 KVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKTQADDYP 386 (411)
Q Consensus 308 ~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~ 386 (411)
.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++...
T Consensus 300 ~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~ 372 (398)
T 2xkr_A 300 KMMLLFESANFDEAVFCEPEKFDVQRNP-------NSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSV 372 (398)
T ss_dssp EEEEEHHHHHTCTTTSSSTTSCCTTCSS-------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTTCC
T ss_pred EEEeChhhhcCChhhCCCCCeeCCCCCC-------CCCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCcce
Confidence 9999999999999999999999999984 2489999999999999999999999999999999 5999754433
Q ss_pred ---cccccccccCCceEEEEeCC
Q 039939 387 ---IAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 387 ---~~~~~~~~~~~~~v~~~~r~ 406 (411)
.....+..+.+++|+++++.
T Consensus 373 ~~~~~~~~~~~~~~lpv~~~p~~ 395 (398)
T 2xkr_A 373 LPLRPANFVSGLESMPVVFTPSP 395 (398)
T ss_dssp CCBCCCSSBCCBSCCEEECCCCC
T ss_pred ecccCcccccCccceeEEecCCC
Confidence 23345677889999998774
No 37
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=1e-58 Score=435.09 Aligned_cols=356 Identities=14% Similarity=0.167 Sum_probs=280.2
Q ss_pred ccchhhhhcccCCCCCchhHHHHHhhhhcccc-----ccccCCCCeEEecChhhhHHHHhcCCccccccCChh--HH--h
Q 039939 5 ICGETLAFLKPHKSNSTGSFLQQHCSIYGQVF-----KSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--MH--G 75 (411)
Q Consensus 5 ~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~-----~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--~~--~ 75 (411)
..|+.+++..+....+|+.++.+++ +||||+ ++.+ .++++|++|+++++++.++ ..|+++.... +. .
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~ 86 (414)
T 2uuq_A 11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELE 86 (414)
T ss_dssp --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHH
T ss_pred hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccc
Confidence 5688888888877889999999985 799999 8876 6799999999999999876 4565543221 11 2
Q ss_pred h---hccccccccCChhHHHHHHHHHhhhCCCCchhh----------hhH----------------HHHHHHHHHHHcCC
Q 039939 76 I---LGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH----------------SFTINLMVKHLLSI 126 (411)
Q Consensus 76 ~---~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~----------------~~~~~~~~~~~fG~ 126 (411)
+ .+..++++.+|+.|+++|+++++.|+.+++... +++ .+++++++. +||.
T Consensus 87 ~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~-~~G~ 165 (414)
T 2uuq_A 87 MIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAH-YLGV 165 (414)
T ss_dssp HHTCSSSCCGGGCCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHH-HTTC
T ss_pred ccccccccccccCCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHH-HhCC
Confidence 2 224678889999999999999999998776540 010 178888888 6898
Q ss_pred CCChhHHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC------
Q 039939 127 EPEEPIAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR------ 200 (411)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~------ 200 (411)
+.++ ...+.+....+.... .+ .|.. .+..++...+.+++.++++++++++ ..|+++.+++..
T Consensus 166 ~~~~--~~~~~~~~~~~~~~~-~~---~p~~--~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~~ 233 (414)
T 2uuq_A 166 PEED--WTQFDGWTQAIVAAN-AV---DGAT--TGALDAVGSMMAYFTGLIERRRTEP----ADDAISHLVAAGVGADGD 233 (414)
T ss_dssp CGGG--HHHHHHHHHHHHHHH-HC----------CCHHHHHHHHHHHHHHHHHHTTSC----CSSHHHHHHHTTTTCTTC
T ss_pred CHHH--HHHHHHHHHHHHhhc-cc---CCch--hHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhcccccCCC
Confidence 7753 222333322222210 12 0211 1234566788888999998877543 579999999753
Q ss_pred CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhh
Q 039939 201 SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAM 279 (411)
Q Consensus 201 ~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 279 (411)
.++++ ++..++..+++||+|||+ +++|++++|++||++|+++++|+ +||+|||+|+|
T Consensus 234 ~ls~~-ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~l 291 (414)
T 2uuq_A 234 TAGTL-SILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP---------------------EGIPDAVEELL 291 (414)
T ss_dssp HHHHH-HHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHH
T ss_pred CCCHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------HHHHHHHHHHH
Confidence 25666 999999999999999999 99999999999999999999985 38999999999
Q ss_pred cCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCCCCccCCCCceeeccCCCCCCccH
Q 039939 280 RCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGA 358 (411)
Q Consensus 280 Rl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~ 358 (411)
|++|+++.++|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||. ..++|||.|+|.|+|+
T Consensus 292 Rl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-------~~~~~FG~G~r~C~G~ 364 (414)
T 2uuq_A 292 RLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-------RNILTFSHGAHHCLGA 364 (414)
T ss_dssp HHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-------CSCCTTCSSTTCCTTH
T ss_pred HhCCCcCCcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-------CCCcCCCCCCccCCCH
Confidence 99999998899999999999999999999999999999999999 999999999984 4689999999999999
Q ss_pred HHHHHHHHHHHHHHHHhC-eEEecCCC-CccccccccccCCceEEEEeCC
Q 039939 359 ELAKVEISFFLHHLVLNY-RWKTQADD-YPIAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 359 ~la~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~v~~~~r~ 406 (411)
+||++|++++++.|+++| ++++.+++ ......++.++.+++|++++|.
T Consensus 365 ~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~lpv~~~~r~ 414 (414)
T 2uuq_A 365 AAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVRRPLSVPFRVTSSR 414 (414)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEECGGGCEECCCSSBCCEEECEEEEC---
T ss_pred HHHHHHHHHHHHHHHHhCcccEECCCCccccccccccCcceeEEEecCCC
Confidence 999999999999999999 69997432 2223345677889999998874
No 38
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=4.6e-58 Score=432.35 Aligned_cols=360 Identities=19% Similarity=0.235 Sum_probs=282.3
Q ss_pred cchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC-hhHHhhh-------
Q 039939 6 CGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP-KPMHGIL------- 77 (411)
Q Consensus 6 lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~~~~~------- 77 (411)
-+...++..+....+|+.++.++ ++||||+++.++ +++|++|+++++++.++. .++++.. .......
T Consensus 16 ~~~~~~~~~~~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~ 90 (418)
T 3r9b_A 16 QGLLLQLLDPATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPR 90 (418)
T ss_dssp HHHHHHHHSGGGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC------
T ss_pred CcccCCCCChhhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccc
Confidence 33445555555667899999988 588999998765 999999999999997653 3333321 1122221
Q ss_pred --ccccccccCChhHHHHHHHHHhhhCCCCchhh--hhH-----------------------HHHHHHHHHHHcCCCCCh
Q 039939 78 --GKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA--FLH-----------------------SFTINLMVKHLLSIEPEE 130 (411)
Q Consensus 78 --g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~-----------------------~~~~~~~~~~~fG~~~~~ 130 (411)
+..+++..+|+.|+++|+++++.|+.++++.. .++ .+++++++. +||.+.++
T Consensus 91 ~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 169 (418)
T 3r9b_A 91 PQGPASFLFLDPPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLDAVDGPEFNLIDNLAYPLPVAVICR-LLGVPIED 169 (418)
T ss_dssp ---CCCGGGCCTTHHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHHTCCSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred cccccchhhcCCchHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHhhhccCCeehHHHHhCcCCHHHHHH-HcCCCHHH
Confidence 23578899999999999999999998766650 010 177888888 78987653
Q ss_pred hHHHHHHHHHHHHHhhhcccC--ccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCH
Q 039939 131 PIAFKILEDFQTFMKGFVSLP--VYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSE 204 (411)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~p--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~ 204 (411)
...+.+....+...+..+. .+++....++..++.+.+.+++.+++++++++. ..|+++.+++.. .+++
T Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~ls~ 243 (418)
T 3r9b_A 170 --EPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTP----GEDLMSGLVAVEESGDQLTE 243 (418)
T ss_dssp --HHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSC----CSSHHHHHHHHHHHSSSCCH
T ss_pred --HHHHHHHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CccHHHHHHHhhhccCCCCH
Confidence 2223222222222111111 123445566778888899999999998877554 679999998532 5888
Q ss_pred HHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCC
Q 039939 205 EETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGN 283 (411)
Q Consensus 205 ~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p 283 (411)
+ ++..++..+++||+|||+ +++|++++|++||++|+++++|++ |++|+|+|+||++|
T Consensus 244 ~-ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p 301 (418)
T 3r9b_A 244 D-EIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS---------------------RASAVIEETMRYDP 301 (418)
T ss_dssp H-HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG---------------------GHHHHHHHHHHHSC
T ss_pred H-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------hHHHHHHHHHHhCC
Confidence 8 999999999999999999 999999999999999999999853 78999999999999
Q ss_pred CCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHH
Q 039939 284 VVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKV 363 (411)
Q Consensus 284 ~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~ 363 (411)
+++.+.|++++|++++||.||||+.|+++.+++||||++|+||++|+||| ....++|||.|+|.|+|++||++
T Consensus 302 ~~~~~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R-------~~~~~~~FG~G~r~C~G~~lA~~ 374 (418)
T 3r9b_A 302 PVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR-------AQIRHLGFGKGAHFCLGAPLARL 374 (418)
T ss_dssp SBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-------SCCCCCTTCCGGGCCTTHHHHHH
T ss_pred ccccceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCC-------CCCCCcCCCCcCccCccHHHHHH
Confidence 99998899999999999999999999999999999999999999999999 45678999999999999999999
Q ss_pred HHHHHHHHHHHhC-eEEecCCCCccccccccccCCceEEEEeCC
Q 039939 364 EISFFLHHLVLNY-RWKTQADDYPIAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 364 ~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~ 406 (411)
|++++++.|+++| ++++.++.......++..+.+++|++.+|+
T Consensus 375 e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 375 EATVALPALAARFPEARLSGEPEYKRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp HHHHHHHHHHHHCTTCEECSCCEECSCSSBCCEEECEEEC----
T ss_pred HHHHHHHHHHHhCccceeCCCCccccCCcccCcceeEEEecCCC
Confidence 9999999999999 799987644344455777889999998874
No 39
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=2.6e-58 Score=433.86 Aligned_cols=345 Identities=20% Similarity=0.201 Sum_probs=267.5
Q ss_pred CchhHHHHHhhhhccccccccC--CCCeEEecChhhhHHHHhcCCccccccCC----------hhH------Hhhhcccc
Q 039939 20 STGSFLQQHCSIYGQVFKSHLF--CSPAIVSCDHELNMFILQNEEKYFQASYP----------KPM------HGILGKLS 81 (411)
Q Consensus 20 ~~~~~l~~~~~~yG~v~~~~~~--~~~~vvv~~pe~~~~vl~~~~~~~~~~~~----------~~~------~~~~g~~~ 81 (411)
+|+.++.+++ +||||++++++ +.++++|++|+++++++.++ .|+++.. ..+ ...+++.+
T Consensus 21 ~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (425)
T 2z3t_A 21 DPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVENW 97 (425)
T ss_dssp CCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTTC
T ss_pred ChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccccc
Confidence 6788999986 59999999987 78899999999999999865 4554421 111 11122267
Q ss_pred ccccCChhHHHHHHHHHhhhCCCCchhh----------hhH----------------HHHHHHHHHHHcCCCCChhHHHH
Q 039939 82 LLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH----------------SFTINLMVKHLLSIEPEEPIAFK 135 (411)
Q Consensus 82 l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~----------------~~~~~~~~~~~fG~~~~~~~~~~ 135 (411)
+++.+|+.|+++|++++++|+.++++.. +++ .+++++++.+ ||.+.++ ...
T Consensus 98 l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~-~G~~~~~--~~~ 174 (425)
T 2z3t_A 98 LVFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISAL-LGIPEED--HTW 174 (425)
T ss_dssp GGGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHH-HTCCGGG--HHH
T ss_pred cccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH--HHH
Confidence 8889999999999999999998766540 010 1788889887 9987653 223
Q ss_pred HHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc----CCCCHHHHHHHH
Q 039939 136 ILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK----RSLSEEETVSIV 211 (411)
Q Consensus 136 ~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~----~~~~~~~~~~~~ 211 (411)
+.+....+...+..+| ++....++..++...+.+++.++++++++++ ..|+++.+++. ..++++ ++..+
T Consensus 175 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~ls~~-el~~~ 247 (425)
T 2z3t_A 175 LRANAVALQEASTTRA--RDGRGYARAEAASQEFTRYFRREVDRRGGDD----RDDLLTLLVRARDTGSPLSVD-GIVGT 247 (425)
T ss_dssp HHHHHHHHHTTCTTCC--C---HHHHHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHTTCCCCHH-HHHHH
T ss_pred HHHHHHHHHhhccccC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhccCCCCCHH-HHHHH
Confidence 3333333332221112 2222345566777788888888888776543 57899999864 258888 99999
Q ss_pred HHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccce
Q 039939 212 LDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHR 290 (411)
Q Consensus 212 ~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R 290 (411)
+..+++||+|||+ +++|++++|++||++|+|+++|++ ||+|||+|+||++|+++.++|
T Consensus 248 ~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R 306 (425)
T 2z3t_A 248 CVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE---------------------STPAAVEELMRYDPPVQAVTR 306 (425)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSBCEEEE
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------------hHHHHHHHHHHhCCcccCcce
Confidence 9999999999999 999999999999999999999852 899999999999999998899
Q ss_pred eeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHH
Q 039939 291 EAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLH 370 (411)
Q Consensus 291 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~ 370 (411)
++.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++
T Consensus 307 ~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~la 379 (425)
T 2z3t_A 307 WAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA-------ERQVGFGLGIHYCLGATLARAEAEIGLR 379 (425)
T ss_dssp EESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS-------SCCCTTCCSTTCCTTHHHHHHHHHHHHH
T ss_pred EeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC-------CCCCCCCCCCccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999995 4689999999999999999999999999
Q ss_pred HHHHhC-eEEecCCCC--ccccccccccCCceEEEEeCC
Q 039939 371 HLVLNY-RWKTQADDY--PIAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 371 ~ll~~f-~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~ 406 (411)
.|+++| +++ .++.. .....++..+.+++|++.+..
T Consensus 380 ~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 417 (425)
T 2z3t_A 380 ALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDAA 417 (425)
T ss_dssp HHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC---
T ss_pred HHHHhCCcCc-cCCCccccccccccCCcceeeEEecchh
Confidence 999999 899 75432 222344677778888886653
No 40
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=6.6e-58 Score=432.13 Aligned_cols=362 Identities=15% Similarity=0.209 Sum_probs=280.4
Q ss_pred ccchhhhhcccCCC-CCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccCC-hh----HH-h-
Q 039939 5 ICGETLAFLKPHKS-NSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYP-KP----MH-G- 75 (411)
Q Consensus 5 ~lG~~~~~~~~~~~-~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~----~~-~- 75 (411)
++|++.+... ... .+|+.++.++++ ||||+++++ ++.++++++++++++++++++ ..|+++.. .. .. .
T Consensus 11 ~~g~l~~~~~-~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~~~~~~~~~~ 87 (428)
T 1cpt_A 11 IARTVILPQG-YADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEILYDQNNEAF 87 (428)
T ss_dssp HHHHHHSSGG-GGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHH
T ss_pred hhcccCChhh-hcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccccCCcccccch
Confidence 7887654411 111 358889988875 799999998 678999999999999999765 35655432 11 11 2
Q ss_pred h---hc-----cccccccCChhHHHHHHHHHhhhCCCCchhh----------hhH-----------------HHHHHHHH
Q 039939 76 I---LG-----KLSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLH-----------------SFTINLMV 120 (411)
Q Consensus 76 ~---~g-----~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~-----------------~~~~~~~~ 120 (411)
+ +| ..++++.+|+.|+++|+++++.|+.++++.. +++ .+++++++
T Consensus 88 ~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~ 167 (428)
T 1cpt_A 88 MRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFMTDCALYYPLHVVM 167 (428)
T ss_dssp HHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEHHHHTTTTHHHHHHH
T ss_pred hccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehHHHHHhhhHHHHHH
Confidence 2 43 2478889999999999999999988765540 010 08889999
Q ss_pred HHHcCCCCChhHHHHHHHHHHHHHhhh----cccCc--cCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHH
Q 039939 121 KHLLSIEPEEPIAFKILEDFQTFMKGF----VSLPV--YIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLD 194 (411)
Q Consensus 121 ~~~fG~~~~~~~~~~~~~~~~~~~~~~----~~~p~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~ 194 (411)
.+ ||.+.++ ...+.+....+.... ..+|+ +++...+++..++...+.+++.++++++++++ ..|+++
T Consensus 168 ~~-fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~ 240 (428)
T 1cpt_A 168 TA-LGVPEDD--EPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSCP----KDDVMS 240 (428)
T ss_dssp HH-HTCCGGG--HHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTTSC----CSSHHH
T ss_pred HH-cCCCHhH--HHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHcCC----CCcHHH
Confidence 88 9987653 223333322222111 11111 11011224556677888889999998887543 579999
Q ss_pred HHHccC----CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccCh
Q 039939 195 VILKKR----SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQME 269 (411)
Q Consensus 195 ~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~ 269 (411)
.+++.. .++++ ++..++..+++||+|||+ +++|++++|++||++|+|+++|++
T Consensus 241 ~ll~~~~~~~~ls~~-ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------- 298 (428)
T 1cpt_A 241 LLANSKLDGNYIDDK-YINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA--------------------- 298 (428)
T ss_dssp HHHHCBSSSSBCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------
T ss_pred HHHhccccCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH---------------------
Confidence 999653 48888 999999999999999999 999999999999999999999853
Q ss_pred hHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeecc
Q 039939 270 FTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFG 349 (411)
Q Consensus 270 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG 349 (411)
||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||
T Consensus 299 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG 371 (428)
T 1cpt_A 299 LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFP-------NRHLGFG 371 (428)
T ss_dssp GHHHHHHHHHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCS-------CCCCTTC
T ss_pred HHHHHHHHHHHhCCcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCC-------CCCCCCC
Confidence 789999999999999999899999999999999999999999999999999999999999999994 2389999
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCe-EEecCCCCccccccccccCCceEEEEeC
Q 039939 350 GGPRLCPGAELAKVEISFFLHHLVLNYR-WKTQADDYPIAYPYVEFRRGLLLEIERT 405 (411)
Q Consensus 350 ~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~v~~~~r 405 (411)
.|+|.|+|++||++|++++++.|+++|+ +++.++........+..+.+++|++++|
T Consensus 372 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 372 WGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPRLVATNFVGGPKNVPIRFTKA 428 (428)
T ss_dssp CSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCCEECCCSSBCSEEECEEEEEEC
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCcccccCccccCcceeeEEeeCC
Confidence 9999999999999999999999999998 8887544333334566677899999875
No 41
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=5e-58 Score=430.09 Aligned_cols=343 Identities=18% Similarity=0.205 Sum_probs=277.3
Q ss_pred CCchhHHHHHhhhhccccccccCC--CCeEEecChhhhHHHHhcCCccccccCChhHHh----hh-c-cccccccCChhH
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFC--SPAIVSCDHELNMFILQNEEKYFQASYPKPMHG----IL-G-KLSLLTVSGDLH 90 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~--~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~----~~-g-~~~l~~~~g~~~ 90 (411)
++|+.++.++++ ||||+++...| .++++|+++++++++++++ ..|+++....... .. . ..+++..+|+.|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence 489999999985 99999997555 7899999999999999654 4555443221111 11 1 356888999999
Q ss_pred HHHHHHHHhhhCCCCchh--hhhHH------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHH
Q 039939 91 KKLRNVAVSFIGASKSTP--AFLHS------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFM 144 (411)
Q Consensus 91 ~~~R~~~~~~~~~~~l~~--~~~~~------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~ 144 (411)
+++|+++++.|+.++++. ..+++ +++++++. +||.+.++ ...+.+....+.
T Consensus 115 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~~~~~~ 191 (415)
T 3mgx_A 115 RKLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCE-ILGVPAED--EDMLIDLTNHAF 191 (415)
T ss_dssp HHHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHH-HHTCCGGG--HHHHHHHHHHHT
T ss_pred HHHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHH
Confidence 999999999999887665 01111 88888887 57876543 334444444433
Q ss_pred hhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccCCCCHHHHHHHHHHHHHhcchHHHH
Q 039939 145 KGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKRSLSEEETVSIVLDIMLGGYETTAT 224 (411)
Q Consensus 145 ~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt~ 224 (411)
... .+.+.+. ...++...+.+++.++++++++++ .+|+++.+++...++++ ++..++..+++||+|||+
T Consensus 192 ~~~--~~~~~~~----~~~~~~~~l~~~~~~~i~~rr~~~----~~dll~~ll~~~~ls~~-el~~~~~~ll~AG~eTTa 260 (415)
T 3mgx_A 192 GGE--DELFDGM----TPRQAHTEILVYFDELITARRKEP----GDDLVSTLVTDDDLTID-DVLLNCDNVLIGGNETTR 260 (415)
T ss_dssp SCC--C----CC----CHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCTTSCHH-HHHHHHHHHHHHHHTTHH
T ss_pred ccc--CcccchH----HHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhCCCCCHH-HHHHHHHHHHHhhhHHHH
Confidence 211 1222222 123667888889999999887654 67999999987678999 999999999999999999
Q ss_pred -HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEe
Q 039939 225 -LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLI 303 (411)
Q Consensus 225 -~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~i 303 (411)
+++|++++|++||++|+++++|+ +||+|+|+|+||++|+++.++|++++|++++||.|
T Consensus 261 ~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~I 319 (415)
T 3mgx_A 261 HAITGAVHALATVPGLLTALRDGS---------------------ADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDL 319 (415)
T ss_dssp HHHHHHHHHHHHSTTHHHHHHHTS---------------------SCHHHHHHHHHHHHCCBCEEEEEESSCEEETTEEE
T ss_pred HHHHHHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHHhcCcccccceecCCCeeECCEEE
Confidence 99999999999999999999984 79999999999999999999999999999999999
Q ss_pred CCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEecC
Q 039939 304 PSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKTQA 382 (411)
Q Consensus 304 p~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~ 382 (411)
|||+.|+++.+++||||++|+||++|+|||| ...++|||+|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus 320 p~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~-------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~ 392 (415)
T 3mgx_A 320 PSGTPVVAWLPAANRDPAEFDDPDTFLPGRK-------PNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLER 392 (415)
T ss_dssp CTTCEEEEEHHHHTTCTTTSSSTTSCCTTCC-------SCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECS
T ss_pred CCCCEEEechHHhCCChhhcCCccccCCCCC-------CCCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCC
Confidence 9999999999999999999999999999997 34689999999999999999999999999999999 799986
Q ss_pred CCCccccccccccCCceEEEEeC
Q 039939 383 DDYPIAYPYVEFRRGLLLEIERT 405 (411)
Q Consensus 383 ~~~~~~~~~~~~~~~~~v~~~~r 405 (411)
+........+..+..++|++++|
T Consensus 393 ~~~~~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 393 EPAWLRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp CCEECSCSSBCCEEECEEEEEEC
T ss_pred CcccccCCcccCceeeeEEEecC
Confidence 55444445567778899999887
No 42
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=1.7e-57 Score=425.34 Aligned_cols=339 Identities=16% Similarity=0.136 Sum_probs=272.2
Q ss_pred CchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh----------hHHhhhccccccccCChh
Q 039939 20 STGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK----------PMHGILGKLSLLTVSGDL 89 (411)
Q Consensus 20 ~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~----------~~~~~~g~~~l~~~~g~~ 89 (411)
+|+.++..+ ++||||++ + |.++++|++|++++++|.++ .|+.+... .+...++ .++++.+|+.
T Consensus 14 ~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~~ 86 (397)
T 3buj_A 14 DPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVG-DIILFQDEPD 86 (397)
T ss_dssp CCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHT-TCGGGCCTTH
T ss_pred CchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccc-cccccCCchh
Confidence 678888877 59999998 6 67899999999999999863 34432111 0111113 6788899999
Q ss_pred HHHHHHHHHhhhCCCCchhh----------hhH----------------HHHHHHHHHHHcCCCCChhHHHHHHHHHHHH
Q 039939 90 HKKLRNVAVSFIGASKSTPA----------FLH----------------SFTINLMVKHLLSIEPEEPIAFKILEDFQTF 143 (411)
Q Consensus 90 ~~~~R~~~~~~~~~~~l~~~----------~~~----------------~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~ 143 (411)
|+++|+++++.|+.+++... +++ .+++++++.+ ||.+.++ ...+.+....+
T Consensus 87 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~ 163 (397)
T 3buj_A 87 HGRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGL-LGLPAAD--WGAVGRWSRDV 163 (397)
T ss_dssp HHHHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHH-HTCCGGG--HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHH-hCCCHHH--HHHHHHHHHHH
Confidence 99999999999999887651 010 1778888887 9987654 22333333333
Q ss_pred HhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC---CCCHHHHHHHHHHHHHhcch
Q 039939 144 MKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR---SLSEEETVSIVLDIMLGGYE 220 (411)
Q Consensus 144 ~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~~~~~~~~~~~ag~ 220 (411)
... ++..++...+++..++...+.+++.++++++++.. .+|+++.|++.. .++++ ++..++..+++||+
T Consensus 164 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~ls~~-ei~~~~~~~~~AG~ 235 (397)
T 3buj_A 164 GRT---LDRGASAEDMRRGHAAIAEFADYVERALARRRREG----GEDLLALMLDAHDRGLMSRN-EIVSTVVTFIFTGH 235 (397)
T ss_dssp HGG---GCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCSHHHHHHHHHHTTSSCHH-HHHHHHHHHHHHHH
T ss_pred Hhh---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CCCHHHHHHHhhhcCCCCHH-HHHHHHHHHHHcCc
Confidence 222 12122323345566777888899999998887654 569999998642 38888 99999999999999
Q ss_pred HHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccC
Q 039939 221 TTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFK 299 (411)
Q Consensus 221 ~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~ 299 (411)
|||+ +++|++++|++||++|+++++|+ .||+|||+|+||++|+++.++|++.+|++++
T Consensus 236 ~Tt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~ 294 (397)
T 3buj_A 236 ETVASQVGNAVLSLLAHPDQLDLLRRRP---------------------DLLAQAVEECLRYDPSVQSNTRQLDVDVELR 294 (397)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSCCEEEEEESSCEEET
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHhhCH---------------------HHHHHHHHHHHhhcCcccCcceEECCCEEEC
Confidence 9999 99999999999999999999984 2899999999999999998899999999999
Q ss_pred CEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eE
Q 039939 300 EYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RW 378 (411)
Q Consensus 300 g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~ 378 (411)
||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|||++||++|++++++.| ++| ++
T Consensus 295 g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~ 366 (397)
T 3buj_A 295 GRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP-------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGL 366 (397)
T ss_dssp TEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC-------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTC
T ss_pred CEEECCCCEEEEChhhhCCCccccCCccccCCCCCC-------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCc
Confidence 999999999999999999999999999999999994 458999999999999999999999999999 999 89
Q ss_pred EecCC-CCcc--ccccccccCCceEEEEeC
Q 039939 379 KTQAD-DYPI--AYPYVEFRRGLLLEIERT 405 (411)
Q Consensus 379 ~~~~~-~~~~--~~~~~~~~~~~~v~~~~r 405 (411)
++.++ +... ...++..+++++|++++|
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r 396 (397)
T 3buj_A 367 RLGCASDALAYQPRTMFRGLASLPIAFTPG 396 (397)
T ss_dssp EESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred eeCCCCcccccccccccCCCcceeEEecCC
Confidence 99865 3322 234567788999999876
No 43
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=2.1e-57 Score=425.61 Aligned_cols=339 Identities=16% Similarity=0.197 Sum_probs=273.9
Q ss_pred CCchhHHHHHhhhhccccccccCC--CCeEEecChhhhHHHHhcCCccccccCCh-----hHHhhhc--cccccccCChh
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFC--SPAIVSCDHELNMFILQNEEKYFQASYPK-----PMHGILG--KLSLLTVSGDL 89 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~--~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-----~~~~~~g--~~~l~~~~g~~ 89 (411)
++|+.++.+++ +||||+++.+++ .+.+++++|+++++++.+. .|++.... .+....+ ..++++.+|+.
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 103 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPD 103 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTH
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCchH
Confidence 45558999987 899999999754 7899999999999999863 34432211 1122222 36788899999
Q ss_pred HHHHHHHHHhhhCCCCchhh----------hhH-----------------HHHHHHHHHHHcCCCCChhHHHHHHHHHHH
Q 039939 90 HKKLRNVAVSFIGASKSTPA----------FLH-----------------SFTINLMVKHLLSIEPEEPIAFKILEDFQT 142 (411)
Q Consensus 90 ~~~~R~~~~~~~~~~~l~~~----------~~~-----------------~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 142 (411)
|+++|+++++.|+.+++... +++ .+++++++. +||.+.++ . +.+..
T Consensus 104 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~----~~~~~ 176 (411)
T 2dkk_A 104 HNRLRRAVAGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSE-VMGVPAAD--R----ERVHS 176 (411)
T ss_dssp HHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH--H----HHHHH
T ss_pred HHHHHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH--H----HHHHH
Confidence 99999999999998876651 010 077888887 58988764 1 22333
Q ss_pred HHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc---CCCCHHHHHHHHHHHHHhcc
Q 039939 143 FMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK---RSLSEEETVSIVLDIMLGGY 219 (411)
Q Consensus 143 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~---~~~~~~~~~~~~~~~~~~ag 219 (411)
+...+.... + ..++..++...+.+++.++++++++++ ..|+++.|++. ..++++ ++..++..+++||
T Consensus 177 ~~~~~~~~~---~--~~~~~~~~~~~l~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~ls~~-el~~~~~~l~~AG 246 (411)
T 2dkk_A 177 WTRQIISTS---G--GAEAAERAKRGLYGWITETVRARAGSE----GGDVYSMLGAAVGRGEVGET-EAVGLAGPLQIGG 246 (411)
T ss_dssp HHGGGCSSC---S--CSHHHHHHHHHHHHHHHHHHHTTTTCC----SSCHHHHHHHHHHTTSSCTT-SHHHHHHHHHHTH
T ss_pred HHHHHHhcc---c--hHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhcCCCCCCHH-HHHHHHHHHHHhh
Confidence 333332221 1 345667778888899999988876543 56899999864 258888 9999999999999
Q ss_pred hHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-c-cceeecccc
Q 039939 220 ETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-F-VHREAIRDV 296 (411)
Q Consensus 220 ~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~-~~R~~~~d~ 296 (411)
|||+ +++|++++|++||++|+++++|++ ||+|+|+|+||++|+++ . ++|++.+|+
T Consensus 247 -eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~ 304 (411)
T 2dkk_A 247 -EAVTHNVGQMLYLLLTRRELMARMRERPG---------------------ARGTALDELLRWISHRTSVGLARIALEDV 304 (411)
T ss_dssp -HHHHHHHHHHHHHHHHSHHHHHHHHHCTT---------------------CCHHHHHHHHHHSCCBSSCCCCEEESSCE
T ss_pred -HHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHhhCCccccCccceEECCCE
Confidence 9999 999999999999999999999852 78999999999999999 7 899999999
Q ss_pred ccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC
Q 039939 297 KFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY 376 (411)
Q Consensus 297 ~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f 376 (411)
+++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus 305 ~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f 377 (411)
T 2dkk_A 305 EVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP-------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377 (411)
T ss_dssp EETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS-------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred EECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC-------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999984 4689999999999999999999999999999999
Q ss_pred -eEEecCCC-Cc--cccccccccCCceEEEEeCC
Q 039939 377 -RWKTQADD-YP--IAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 377 -~~~~~~~~-~~--~~~~~~~~~~~~~v~~~~r~ 406 (411)
++++.++. .. ....++..+.+++|++++|.
T Consensus 378 ~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 378 PGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp TTCEESSCGGGCCBCCSSSBCCBSCCEEECCCCC
T ss_pred CCcEECCCccccccccCcccCCcceeEEEeccCC
Confidence 89998653 22 22345677889999998874
No 44
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=2.7e-57 Score=424.38 Aligned_cols=341 Identities=17% Similarity=0.194 Sum_probs=273.7
Q ss_pred CCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccCC----hh---HHhhhccccccccCChh
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYP----KP---MHGILGKLSLLTVSGDL 89 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~----~~---~~~~~g~~~l~~~~g~~ 89 (411)
..+|+.++.+| ++||||+++++ ++.+++++++++++++++.++. |+++.. .. +....+..++++.+|+.
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 94 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDSS--FSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE 94 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCTT--EESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCCC--cccccccccccccccccccccccccccCCchh
Confidence 35788899999 89999999997 7899999999999999998752 443321 10 11211235788899999
Q ss_pred HHHHHHHHHhhhCCCCchh----------hh---hH-H-------------HHHHHHHHHHcCCCCChhHHHHHHHHHHH
Q 039939 90 HKKLRNVAVSFIGASKSTP----------AF---LH-S-------------FTINLMVKHLLSIEPEEPIAFKILEDFQT 142 (411)
Q Consensus 90 ~~~~R~~~~~~~~~~~l~~----------~~---~~-~-------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 142 (411)
|+++|+++++.|+.++++. .+ +. . +++++++. +||.+.++ ...+.+....
T Consensus 95 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~ 171 (403)
T 3aba_A 95 HTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISD-LFGVPVER--RAEFQDIAEA 171 (403)
T ss_dssp HHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHHHHHHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHH
Confidence 9999999999999876554 00 11 0 67778876 68887643 2223332222
Q ss_pred HHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhc
Q 039939 143 FMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGG 218 (411)
Q Consensus 143 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~a 218 (411)
+ .... .+ + ++..++...+.+++.+++++++++. ..|+++.+++.. .++++ ++..++..+++|
T Consensus 172 ~----~~~~--~~-p--~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~l~~~-ei~~~~~~l~~A 237 (403)
T 3aba_A 172 M----MRVD--QD-A--AATEAAGMRLGGLLYQLVQERRANP----GDDLISALITTEDPDGVVDDM-FLMNAAGTLLIA 237 (403)
T ss_dssp H----SBSS--SC-H--HHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHTSCCTTCCCSHH-HHHHHHHHHHHH
T ss_pred H----Hhcc--Cc-H--HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhhccCCCCCCHH-HHHHHHHHHHHH
Confidence 2 2211 01 1 5566777888899999998887654 569999999753 48888 999999999999
Q ss_pred chHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-ccceeecccc
Q 039939 219 YETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FVHREAIRDV 296 (411)
Q Consensus 219 g~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~ 296 (411)
|+|||+ +++|++++|++||++|+++++|+ .||+|||+|+||++|+++ .++|++.+|+
T Consensus 238 G~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~ 296 (403)
T 3aba_A 238 AHDTTACMIGLGTALLLDSPDQLALLREDP---------------------SLVGNAVEELLRYLTIGQFGGERVATRDV 296 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSCTTCEEEEESSCE
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHhcCCCcccccceEeCCCe
Confidence 999999 99999999999999999999884 379999999999999999 7899999999
Q ss_pred ccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC
Q 039939 297 KFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY 376 (411)
Q Consensus 297 ~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f 376 (411)
+++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||++|++++++.|+++|
T Consensus 297 ~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f 369 (403)
T 3aba_A 297 ELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP-------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369 (403)
T ss_dssp EETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHS
T ss_pred EECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC-------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999982 4689999999999999999999999999999999
Q ss_pred -eEEecCCC-Ccc--ccccccccCCceEEEEeCC
Q 039939 377 -RWKTQADD-YPI--AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 377 -~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~r~ 406 (411)
++++.++. ... ....+..+.+++|++++|.
T Consensus 370 ~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 370 PGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp TTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred CCceecCCccccccccCcccCCcceeEEEecCCC
Confidence 59987542 222 2334677889999998874
No 45
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=2.7e-57 Score=425.41 Aligned_cols=339 Identities=15% Similarity=0.126 Sum_probs=276.8
Q ss_pred CCCchhHHHHHhhhhc--cccccccCCCCeEEecChhhhHHHHhcCCccccccC--ChhHHhhhcccc-ccccCChhHHH
Q 039939 18 SNSTGSFLQQHCSIYG--QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY--PKPMHGILGKLS-LLTVSGDLHKK 92 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG--~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~--~~~~~~~~g~~~-l~~~~g~~~~~ 92 (411)
..+|+.++.+|+ +|| |||++...| +.+++++++++++++.+. ..|+++. .......++ .+ ++..+|+.|++
T Consensus 36 ~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~-~~~l~~~~g~~~~~ 111 (415)
T 2zwu_A 36 SAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHFSSECPFIPREAGEAY-DFIPTSMDPPEQRQ 111 (415)
T ss_dssp GGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTEETTSCSSSHHHHHHC-CCTTTTCCTTTTHH
T ss_pred ccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-cccCCCcccCCCCccccc-cccCccCCCcHHHH
Confidence 457899999996 899 999998434 699999999999999754 3555443 222222234 56 88889999999
Q ss_pred HHHHHHhhhCCCCchhh----------hhH----------------HHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhh
Q 039939 93 LRNVAVSFIGASKSTPA----------FLH----------------SFTINLMVKHLLSIEPEEPIAFKILEDFQTFMKG 146 (411)
Q Consensus 93 ~R~~~~~~~~~~~l~~~----------~~~----------------~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~ 146 (411)
+|+++++.|+..+++.. +++ .+++++++.+ ||.+.++ ...+.+.+..+...
T Consensus 112 ~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~ 188 (415)
T 2zwu_A 112 FRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLL-AGLPEED--IPHLKYLTDQMTRP 188 (415)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGTEEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHSC
T ss_pred HHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHH-cCCCHHH--HHHHHHHHHHHHhc
Confidence 99999999988766540 010 1788999988 9988753 23344444333321
Q ss_pred hcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHH
Q 039939 147 FVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETT 222 (411)
Q Consensus 147 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~t 222 (411)
. .|. +..++...+.+++.+++++++++. ..|+++.+++.. .++++ ++..++..+++||+||
T Consensus 189 ~------~P~----~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~l~~~-~i~~~~~~l~~AG~dT 253 (415)
T 2zwu_A 189 D------GSM----TFAEAKEALYDYLIPIIEQRRQKP----GTDAISIVANGQVNGRPITSD-EAKRMCGLLLVGGLDT 253 (415)
T ss_dssp C------SSS----CHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHTCEETTEECCHH-HHHHHHHHHHHHHHHT
T ss_pred c------CHH----HHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhhcCCCCCHH-HHHHHHHHHHHHhHhH
Confidence 1 122 345677788889999999887643 579999999752 48888 9999999999999999
Q ss_pred HH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCE
Q 039939 223 AT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEY 301 (411)
Q Consensus 223 t~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~ 301 (411)
|+ +++|++++|++||++|+++++|++ ||+|+|+|+||++|+++++ |.+.+|++++||
T Consensus 254 ta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~-R~~~~d~~~~G~ 311 (415)
T 2zwu_A 254 VVNFLSFSMEFLAKSPEHRQELIERPE---------------------RIPAACEELLRRFSLVADG-RILTSDYEFHGV 311 (415)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHTCCBCCE-EEESSCEEETTE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHhhcCCcCCc-eeeCCCEEECCE
Confidence 99 999999999999999999999842 7999999999999999999 999999999999
Q ss_pred EeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCe-EEe
Q 039939 302 LIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYR-WKT 380 (411)
Q Consensus 302 ~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~ 380 (411)
.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|+|++||++|++++++.|+++|+ +++
T Consensus 312 ~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~ 384 (415)
T 2zwu_A 312 QLKKGDQILLPQMLSGLDERENACPMHVDFSRQ-------KVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSI 384 (415)
T ss_dssp EECTTCEEECCHHHHHHCTTTSSSTTSCCTTCS-------SCCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred EECCCCEEEeCchhhCCCchhCCCccccCCCCC-------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 999999999999999999999999999999995 256899999999999999999999999999999998 999
Q ss_pred cCCCCc-cccccccccCCceEEEEeCCC
Q 039939 381 QADDYP-IAYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 381 ~~~~~~-~~~~~~~~~~~~~v~~~~r~~ 407 (411)
.++... ....++..+.+++|++++|..
T Consensus 385 ~~~~~~~~~~~~~~~~~~lpv~~~~r~~ 412 (415)
T 2zwu_A 385 APGAQIQHKSGIVSGVQALPLVWDPATT 412 (415)
T ss_dssp CTTCCCCEECSSBCEESCCEEECCGGGC
T ss_pred CCCcccccCCccccCcceeEEEEecCCC
Confidence 875443 334567778899999998863
No 46
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=6.5e-57 Score=422.60 Aligned_cols=331 Identities=18% Similarity=0.223 Sum_probs=262.5
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccC-CCCeEEecChhhhHHHHhcCCc-ccccc--CCh--h--H
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLF-CSPAIVSCDHELNMFILQNEEK-YFQAS--YPK--P--M 73 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~-~~~~vvv~~pe~~~~vl~~~~~-~~~~~--~~~--~--~ 73 (411)
++|++||+.. +|+.++.+|+ +||||+++.++ |...++|++++.+++++.++.. .+..+ ... . .
T Consensus 8 ~~P~~g~~~~--------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~~ 78 (404)
T 1jfb_A 8 SFPFSRASGP--------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGK 78 (404)
T ss_dssp BSSCCCSSTT--------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHH
T ss_pred CCCCCCCcCC--------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccccccc
Confidence 5899999764 4667888886 69999999874 6677889999999999987631 12111 111 0 1
Q ss_pred HhhhccccccccCChhHHHHHHHHHhhhCCCCchhh--hhHH---------------------------HHHHHHHHHHc
Q 039939 74 HGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA--FLHS---------------------------FTINLMVKHLL 124 (411)
Q Consensus 74 ~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~~---------------------------~~~~~~~~~~f 124 (411)
....+..++++.+|+.|+++|+++++.|+.++++.. .+++ .+.++++..+|
T Consensus 79 ~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~~ 158 (404)
T 1jfb_A 79 QAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLL 158 (404)
T ss_dssp HHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHH
T ss_pred chhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHc
Confidence 123344578889999999999999999998776540 0110 45566777788
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc----C
Q 039939 125 SIEPEEPIAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK----R 200 (411)
Q Consensus 125 G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~----~ 200 (411)
|.+.++. +....+... +.. +. ...++..++...+.+++.+++++++++. .+|+++.+++. .
T Consensus 159 G~~~~~~---~~~~~~~~~---~~~---~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~ 223 (404)
T 1jfb_A 159 GVPFNDL---EYLTQQNAI---RTN---GS--STAREASAANQELLDYLAILVEQRLVEP----KDDIISKLCTEQVKPG 223 (404)
T ss_dssp TCCGGGH---HHHHHHHHH---HHC---TT--SCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHTTTTT
T ss_pred CCCHHHH---HHHHHHHHH---Hhc---cC--cchHHHHHHHHHHHHHHHHHHHHHHhCC----CCcHHHHHHHhhccCC
Confidence 8776531 122222111 111 11 1235566777888899999998887654 57999999853 2
Q ss_pred CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhh
Q 039939 201 SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAM 279 (411)
Q Consensus 201 ~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 279 (411)
.++++ ++..++..+++||+|||+ +++|++++|++||++|+|++++ .+||+|||+|+|
T Consensus 224 ~l~~~-ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~---------------------~~yl~a~i~E~l 281 (404)
T 1jfb_A 224 NIDKS-DAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN---------------------PSLAPQFVEELC 281 (404)
T ss_dssp SSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC---------------------GGGHHHHHHHHH
T ss_pred CCCHH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC---------------------hHhHHHHHHHHH
Confidence 58888 999999999999999999 9999999999999999999972 279999999999
Q ss_pred cCCCCCc-ccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccH
Q 039939 280 RCGNVVK-FVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGA 358 (411)
Q Consensus 280 Rl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~ 358 (411)
|++|+++ .++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++. ..++|||.|+|.|+|+
T Consensus 282 Rl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~-----~~~~~Fg~G~r~C~G~ 356 (404)
T 1jfb_A 282 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP-----QDPLGFGFGDHRCIAE 356 (404)
T ss_dssp HHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS-----SCCCTTCCGGGSCTTH
T ss_pred hhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC-----CCCCCCCCCCccCCCH
Confidence 9999999 689999999999999999999999999999999999999999999999753 3599999999999999
Q ss_pred HHHHHHHHHHHHHHHHhC-eEEecCC
Q 039939 359 ELAKVEISFFLHHLVLNY-RWKTQAD 383 (411)
Q Consensus 359 ~la~~~~~~~l~~ll~~f-~~~~~~~ 383 (411)
+||++|++++++.|+++| ++++..+
T Consensus 357 ~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 357 HLAKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred HHHHHHHHHHHHHHHHHCCCceecCC
Confidence 999999999999999999 7998754
No 47
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=1.6e-57 Score=427.15 Aligned_cols=347 Identities=17% Similarity=0.192 Sum_probs=273.9
Q ss_pred CCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChhHHhh-hccccccccCChhHHHHHHHH
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPMHGI-LGKLSLLTVSGDLHKKLRNVA 97 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~~~~-~g~~~l~~~~g~~~~~~R~~~ 97 (411)
.+|+.++.++++ |||| ++++.+.+++++++++++++.++. .|+++....+... .+..+++..+|+.|+++|+++
T Consensus 28 ~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~ 102 (411)
T 2jjn_A 28 TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTA-TFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVV 102 (411)
T ss_dssp HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTT-TEESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHH
T ss_pred cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCcc-cccCcccccCCcccccccccccCCchHHHHHHHHh
Confidence 367888999975 9998 456678999999999999998653 5555432212121 223578888999999999999
Q ss_pred HhhhCCCCchh----------hhh--------------HHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcccCcc
Q 039939 98 VSFIGASKSTP----------AFL--------------HSFTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVSLPVY 153 (411)
Q Consensus 98 ~~~~~~~~l~~----------~~~--------------~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 153 (411)
++.|+.++++. .++ ..+++++++.+ ||.+.++. .++.+....+... ..|.+
T Consensus 103 ~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--~~~~~~~~~~~~~--~~~~~ 177 (411)
T 2jjn_A 103 SSAFTPRTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVAEL-LGLPPMDH--EQFGDWSGALVDI--QMDDP 177 (411)
T ss_dssp HHHSCHHHHHTTHHHHHHHHHHHHHTSCSEEEHHHHTTTHHHHHHHHHH-HTCCSCCC--STTCCHHHHHHHS--CCSCT
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH-cCCCHHHH--HHHHHHHHHHHhc--cCccc
Confidence 99998766543 011 11888899988 99876531 1122222222221 12323
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHHHH-HHHH
Q 039939 154 IPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETTAT-LLAL 228 (411)
Q Consensus 154 ~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt~-~l~~ 228 (411)
++....++..++...+.+++.++++++++++ ..|+++.+++.. .++++ ++..++..+++||+|||+ +++|
T Consensus 178 ~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~l~~~-el~~~~~~~~~AG~eTt~~~l~~ 252 (411)
T 2jjn_A 178 TDPALAERIADVLNPLTAYLKARCAERRADP----GDDLISRLVLAEVDGRALDDE-EAANFSTALLLAGHITTTVLLGN 252 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCBTTBCCCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhcccCCCCCCHH-HHHHHHHHHHHhhhHHHHHHHHH
Confidence 3212334566777888889999998887643 579999999753 48888 999999999999999999 9999
Q ss_pred HHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcE
Q 039939 229 IVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWK 308 (411)
Q Consensus 229 ~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~ 308 (411)
++++|++||++|+++++|++ ||+|||+|+||++|++++++|++.+|++++||.||||+.
T Consensus 253 ~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~ 311 (411)
T 2jjn_A 253 IVRTLDEHPAHWDAAAEDPG---------------------RIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVM 311 (411)
T ss_dssp HHHHHHHSTHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECSSCE
T ss_pred HHHHHHhCHHHHHHHHhCHH---------------------hHHHHHHHHhhhCCCcCCcceEECCCeEECCEEECCCCE
Confidence 99999999999999999853 799999999999999999899999999999999999999
Q ss_pred EecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCe-EEecCCCCc-
Q 039939 309 VLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYR-WKTQADDYP- 386 (411)
Q Consensus 309 v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~- 386 (411)
|+++.+++||||++|+||++|+||||.+ ...++|||.|+|.|+|++||++|++++++.|+++|+ +++.++...
T Consensus 312 V~~~~~~~~rdp~~~~dP~~F~PeR~~~-----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~ 386 (411)
T 2jjn_A 312 VNTWVLSANRDSDAHDDPDRFDPSRKSG-----GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERL 386 (411)
T ss_dssp EEEEHHHHHTCTTTSSSTTSCCTTCCCS-----SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSSCCC
T ss_pred EEechhhhCCChhhcCCccccCCCCCCC-----CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCCcee
Confidence 9999999999999999999999999852 136899999999999999999999999999999996 999754333
Q ss_pred -cccccccccCCceEEEEeCC
Q 039939 387 -IAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 387 -~~~~~~~~~~~~~v~~~~r~ 406 (411)
.....+..+.+++|+++++.
T Consensus 387 ~~~~~~~~~~~~lpv~~~~~~ 407 (411)
T 2jjn_A 387 RHFEQIVLGTRHLPVLAGSSP 407 (411)
T ss_dssp CBCCSSSSSBSCCEEECSCCT
T ss_pred ccccccccCcceeEEEecCCC
Confidence 23345677889999998875
No 48
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=5e-58 Score=433.18 Aligned_cols=359 Identities=14% Similarity=0.165 Sum_probs=273.8
Q ss_pred CcccchhhhhcccCC--CCCchhHHHHHhhhhccccccc--------cCCCCeEEecChhhhHHHHhcCCccccccCChh
Q 039939 3 WPICGETLAFLKPHK--SNSTGSFLQQHCSIYGQVFKSH--------LFCSPAIVSCDHELNMFILQNEEKYFQASYPKP 72 (411)
Q Consensus 3 ~P~lG~~~~~~~~~~--~~~~~~~l~~~~~~yG~v~~~~--------~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~ 72 (411)
.|..+...++..+.. ..+|+.++.++ ++||||+++. +|+.++++|+++++++++++++ ..|+++....
T Consensus 19 ~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~ 96 (433)
T 3ivy_A 19 SPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENGV 96 (433)
T ss_dssp -CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTCS
T ss_pred CCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcccc
Confidence 444444444433221 24689999999 7899999998 4447899999999999999765 4455432211
Q ss_pred H----------HhhhccccccccCChhHHHHHHHHHhhhCCCCchhh----------hhHH----------------HHH
Q 039939 73 M----------HGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPA----------FLHS----------------FTI 116 (411)
Q Consensus 73 ~----------~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~~----------------~~~ 116 (411)
. ....+..+++..+|+.|+++|+++++.|+.+++... +++. +++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~ 176 (433)
T 3ivy_A 97 IPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQVSCELPL 176 (433)
T ss_dssp CCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHCEEEHHHHTTSHHHH
T ss_pred cccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeeHHHHHHHHHHH
Confidence 1 111223678899999999999999999998776540 1110 788
Q ss_pred HHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHH
Q 039939 117 NLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVI 196 (411)
Q Consensus 117 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~l 196 (411)
++++.+ ||.+.+ .... +..+...+... ..|.....+..++...+.+++.++++++++++ .+|+++.|
T Consensus 177 ~vi~~l-~G~~~~--~~~~----~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~l 243 (433)
T 3ivy_A 177 QAIAGL-LGVPQE--DRGK----LFHWSNEMTGN--EDPEYAHIDPKASSAELIGYAMKMAEEKAKNP----ADDIVTQL 243 (433)
T ss_dssp HHHHHH-HTCCHH--HHHH----HHHHHTTCSCC--CCGGGTTCCHHHHHHHHHHHHHHHHHHC-----------CHHHH
T ss_pred HHHHHH-cCCCHH--HHHH----HHHHHHHHhcc--CCchhhhHHHHHHHHHHHHHHHHHHHHHhcCC----CCcHHHHH
Confidence 888885 886532 2222 22333222221 11111112456677888889999998876554 67999999
Q ss_pred HccC----CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhH
Q 039939 197 LKKR----SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFT 271 (411)
Q Consensus 197 l~~~----~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l 271 (411)
++.. .++++ ++..++..+++||+|||+ +++|++++|++||++|+++++|++
T Consensus 244 l~~~~~~~~ls~~-ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------------------- 299 (433)
T 3ivy_A 244 IQADIDGEKLSDD-EFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP----------------------- 299 (433)
T ss_dssp HSCC--CCCCCHH-HHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-----------------------
T ss_pred HhhhcCCCCCCHH-HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-----------------------
Confidence 9753 58888 999999999999999999 999999999999999999999964
Q ss_pred HHHHHHhhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeecc-C
Q 039939 272 NNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFG-G 350 (411)
Q Consensus 272 ~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG-~ 350 (411)
+|+|+|+||++|+++.++|++++|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++||| .
T Consensus 300 ~a~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~-------~~~l~FGg~ 372 (433)
T 3ivy_A 300 ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNP-------NPHVGFGGT 372 (433)
T ss_dssp TTHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS-------CCCCTTCSS
T ss_pred cchhHHHhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCC-------CCCCCCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999983 4689999 9
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCe-EEecCCCCccccccccccCCceEEEEeCCC
Q 039939 351 GPRLCPGAELAKVEISFFLHHLVLNYR-WKTQADDYPIAYPYVEFRRGLLLEIERTNG 407 (411)
Q Consensus 351 G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 407 (411)
|+|.|+|++||++|++++++.|+++|+ +++.++........+..+..++|++++|..
T Consensus 373 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~g~~~lpv~~~~R~~ 430 (433)
T 3ivy_A 373 GAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERLRSGWLNGIKHWQVDYTGRCP 430 (433)
T ss_dssp STTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCEECCCSSBCCEEECEEESCC---
T ss_pred CCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCceeccCcccCcceeEEEEecccc
Confidence 999999999999999999999999999 999866544444556667789999998865
No 49
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=5.3e-57 Score=422.73 Aligned_cols=337 Identities=16% Similarity=0.170 Sum_probs=272.1
Q ss_pred CCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC---h----------hH-Hh---hhccc
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP---K----------PM-HG---ILGKL 80 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~---~----------~~-~~---~~g~~ 80 (411)
..+|+.++.++ ++||||+++++++.+++++++|+++++++.++ .|+++.. . .+ .. .++ .
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 88 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA-T 88 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS-S
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcc-c
Confidence 35789999999 89999999999888899999999999999876 3443321 1 11 22 133 6
Q ss_pred cccccCChhHHHHHHHHHhhhCCCCchhh--hhH------------------------HHHHHHHHHHHcCCCCChhHHH
Q 039939 81 SLLTVSGDLHKKLRNVAVSFIGASKSTPA--FLH------------------------SFTINLMVKHLLSIEPEEPIAF 134 (411)
Q Consensus 81 ~l~~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~------------------------~~~~~~~~~~~fG~~~~~~~~~ 134 (411)
++++.+|+.|+++|+++++.|+.+++... .++ .+++++++. +||.+.++ ..
T Consensus 89 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~ 165 (404)
T 1z8o_A 89 NMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICE-LLGVDEKY--RG 165 (404)
T ss_dssp SGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHH-HTTCCGGG--TT
T ss_pred ccccCCCcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHH-HhCCCHHH--HH
Confidence 78889999999999999999998765540 011 177888886 58987643 12
Q ss_pred HHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc-C----CCCHHHHHH
Q 039939 135 KILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK-R----SLSEEETVS 209 (411)
Q Consensus 135 ~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~-~----~~~~~~~~~ 209 (411)
.+.+.+..+.. . . + | ..++..++...+.+++.+.+++++++. .+|+++.+++. . .++++ ++.
T Consensus 166 ~~~~~~~~~~~-~-~-~---p--~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~~l~~~-ei~ 232 (404)
T 1z8o_A 166 EFGRWSSEILV-M-D-P---E--RAEQRGQAAREVVNFILDLVERRRTEP----GDDLLSALIRVQDDDDGRLSAD-ELT 232 (404)
T ss_dssp THHHHHHHHHC-C-C-G---G--GHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCEETTTEECCHH-HHH
T ss_pred HHHHHHHHHhc-c-C-C---h--hHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhhhcccCCCCCHH-HHH
Confidence 33333333332 1 1 1 2 145667778888899999998887653 57999999975 2 48888 999
Q ss_pred HHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCccc
Q 039939 210 IVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFV 288 (411)
Q Consensus 210 ~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~ 288 (411)
.++..+++||+|||+ +++|++++|++||++|+++++|+ .||+|+|+|+||++|+++.+
T Consensus 233 ~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~ 291 (404)
T 1z8o_A 233 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP---------------------SALPNAVEEILRYIAPPETT 291 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHTCSSCCE
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HhHHHHHHHHHHhcCCccCc
Confidence 999999999999999 99999999999999999999984 27899999999999999988
Q ss_pred ceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHH
Q 039939 289 HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFF 368 (411)
Q Consensus 289 ~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~ 368 (411)
+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++
T Consensus 292 ~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~-------~~~~~FG~G~r~C~G~~lA~~e~~~~ 364 (404)
T 1z8o_A 292 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-------RGHLSFGQGIHFCMGRPLAKLEGEVA 364 (404)
T ss_dssp EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC-------TTCCTTCSSTTCCTTHHHHHHHHHHH
T ss_pred ceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC-------CCccCCCCCCccCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999983 46899999999999999999999999
Q ss_pred HHHHHHhCe-EEecCCC-Ccc--ccccccccCCceEEE
Q 039939 369 LHHLVLNYR-WKTQADD-YPI--AYPYVEFRRGLLLEI 402 (411)
Q Consensus 369 l~~ll~~f~-~~~~~~~-~~~--~~~~~~~~~~~~v~~ 402 (411)
++.|+++|+ +++.++. .+. ...++..+.+++|++
T Consensus 365 l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 365 LRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 402 (404)
T ss_dssp HHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred HHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence 999999995 9997542 222 233456777888875
No 50
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=3.9e-57 Score=425.93 Aligned_cols=347 Identities=16% Similarity=0.180 Sum_probs=279.2
Q ss_pred CCCCchhHHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhcCCccccccCChh--HHhhhccccccccCChhHHHH
Q 039939 17 KSNSTGSFLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP--MHGILGKLSLLTVSGDLHKKL 93 (411)
Q Consensus 17 ~~~~~~~~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~--~~~~~g~~~l~~~~g~~~~~~ 93 (411)
...+|+.++.++++++| ||+++..++ +.++|++|+.+++++++. ..|+++.... .....+..+++..+|+.|+++
T Consensus 36 ~~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~ 113 (421)
T 3lxh_A 36 LEQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPY 113 (421)
T ss_dssp GGGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHH
T ss_pred hhcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHHH
Confidence 34589999999987655 899998776 589999999999999654 4555443211 111122357788999999999
Q ss_pred HHHHHhhhCCCCchhh--hhHH------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhh
Q 039939 94 RNVAVSFIGASKSTPA--FLHS------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGF 147 (411)
Q Consensus 94 R~~~~~~~~~~~l~~~--~~~~------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 147 (411)
|+++++.|+.++++.. .+.+ ++.++++. +||.+.++ ...+.+.+..+...
T Consensus 114 R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~~~~~~~~~~~~- 189 (421)
T 3lxh_A 114 RKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLA-LAGLPVED--ATKLGLLANEMTRP- 189 (421)
T ss_dssp HHHHHHHHSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHHHHHHHHSC-
T ss_pred HHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHhcc-
Confidence 9999999998776650 0111 66666665 57876643 33444444333322
Q ss_pred cccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHHH
Q 039939 148 VSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETTA 223 (411)
Q Consensus 148 ~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt 223 (411)
..++|....++..++.+.+.+++.++++++++.. ..|+++.+++.. .++++ ++..++..+++||+|||
T Consensus 190 ---~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~l~~~-ei~~~~~~l~~AG~eTt 261 (421)
T 3lxh_A 190 ---SGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGS----GTDLITRILNVEIDGKPMPDD-RALGLVSLLLLGGLDTV 261 (421)
T ss_dssp ---CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----CCSHHHHHHTSCBTTBCCCHH-HHHHHHHHHHHHHHHHH
T ss_pred ---ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhhhccCCCCCHH-HHHHHHHHHHHHhHHHH
Confidence 2234444456777888899999999999887653 679999999763 58888 99999999999999999
Q ss_pred H-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEE
Q 039939 224 T-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYL 302 (411)
Q Consensus 224 ~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ 302 (411)
+ +++|++++|++||++|+++++|++ ||+|+|+|+||++|++ .++|.+++|++++||.
T Consensus 262 a~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~l~G~~ 319 (421)
T 3lxh_A 262 VNFLGFMMIYLSRHPETVAEMRREPL---------------------KLQRGVEELFRRFAVV-SDARYVVSDMEFHGTM 319 (421)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHH---------------------HHHHHHHHHHHHCCCB-EEEEEECSCEEETTEE
T ss_pred HHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhcCcc-CCceeeCCCeeECCEE
Confidence 9 999999999999999999999975 6789999999999999 9899999999999999
Q ss_pred eCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEec
Q 039939 303 IPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKTQ 381 (411)
Q Consensus 303 ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~ 381 (411)
||||+.|+++.+++||||++|+||++|+|||| ...++|||+|+|.|+|++||++|++++++.|+++| ++++.
T Consensus 320 Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~-------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~ 392 (421)
T 3lxh_A 320 LKEGDLILLPTALHGLDDRHHDDPMTVDLSRR-------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLK 392 (421)
T ss_dssp ECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS-------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEEC
T ss_pred ECCCCEEEEchhhhCCChhhCCCcCeeCCCCC-------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEEC
Confidence 99999999999999999999999999999994 57899999999999999999999999999999999 99998
Q ss_pred CCCCcc-ccccccccCCceEEEEeCC
Q 039939 382 ADDYPI-AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 382 ~~~~~~-~~~~~~~~~~~~v~~~~r~ 406 (411)
+++... ....+..+..++|+++++.
T Consensus 393 ~~~~~~~~~~~~~~~~~lpv~~~p~~ 418 (421)
T 3lxh_A 393 DRAVPIYHSGIVAAVENIPLEWEPQR 418 (421)
T ss_dssp TTCCCEEECSSBCEEECCEEECCCC-
T ss_pred CCCCceeccccccCceeeeEEEeccc
Confidence 665433 2334566778999998874
No 51
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=9.4e-57 Score=424.26 Aligned_cols=342 Identities=13% Similarity=0.169 Sum_probs=276.4
Q ss_pred CchhHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHhcCCccccccC----ChhHHhhh-ccccccccCC
Q 039939 20 STGSFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQNEEKYFQASY----PKPMHGIL-GKLSLLTVSG 87 (411)
Q Consensus 20 ~~~~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~~~~~~~~~~~----~~~~~~~~-g~~~l~~~~g 87 (411)
+|+.++.+|+ +||||+++.++ +.++++|++|+++++++.++ ..|+++. ...+..+. ...++++.+|
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg 122 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLDD 122 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCCT
T ss_pred ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCCc
Confidence 6788899996 79999999986 67899999999999999875 3555442 11112211 1367888899
Q ss_pred hhHHHHHHHHHhhhCCCCchhh----------hh-------------------HHHHHHHHHHHHcCCCCChhHHHHHHH
Q 039939 88 DLHKKLRNVAVSFIGASKSTPA----------FL-------------------HSFTINLMVKHLLSIEPEEPIAFKILE 138 (411)
Q Consensus 88 ~~~~~~R~~~~~~~~~~~l~~~----------~~-------------------~~~~~~~~~~~~fG~~~~~~~~~~~~~ 138 (411)
+.|+++|+++++.|+.++++.. ++ ..+++++++.+ ||.+.++ ...+.+
T Consensus 123 ~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~ 199 (435)
T 2wm5_A 123 PRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD--HQRIFH 199 (435)
T ss_dssp THHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHH
T ss_pred HHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH--HHHHHH
Confidence 9999999999999988765540 00 01788999988 9988754 233444
Q ss_pred HHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHH
Q 039939 139 DFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDI 214 (411)
Q Consensus 139 ~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~ 214 (411)
....+.... .|.+++ .+++..++...+.+++.+++++++++. ..|+++.|++.. .++++ ++..++..
T Consensus 200 ~~~~~~~~~--~p~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~ls~~-ei~~~~~~ 270 (435)
T 2wm5_A 200 WTNVILGFG--DPDLAT--DFDEFMQVSADIGAYATALAEDRRVNH----HDDLTSSLVEAEVDGERLSSR-EIASFFIL 270 (435)
T ss_dssp HHHHHHHTT--CTTSCC--CHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCBTTBCCCHH-HHHHHHHH
T ss_pred HHHHHhccC--Ccchhh--hHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCHHHHHHhhhccCCCCCHH-HHHHHHHH
Confidence 333333221 243332 235667788889999999999887643 579999999753 48888 99999999
Q ss_pred HHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeec
Q 039939 215 MLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAI 293 (411)
Q Consensus 215 ~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~ 293 (411)
+++||+|||+ +++|++++|++||++|+++++|++ +||+|||+|+||++|+++.++|.+.
T Consensus 271 l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~~l~a~i~E~lRl~p~~~~~~R~~~ 330 (435)
T 2wm5_A 271 LVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD--------------------GLAPTAVEEIVRWASPVVYMRRTLT 330 (435)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH--------------------HHHHHHHHHHHHHHCSBCCEEEEES
T ss_pred HHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH--------------------hHHHHHHHHHHhhcCcccCcceEeC
Confidence 9999999999 999999999999999999999976 3789999999999999998899999
Q ss_pred cccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccC-CCCCCccHHHHHHHHHHHHHHH
Q 039939 294 RDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGG-GPRLCPGAELAKVEISFFLHHL 372 (411)
Q Consensus 294 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~-G~r~C~G~~la~~~~~~~l~~l 372 (411)
+|++++||.||||+.|+++.+++||||++|+||++|+|||+ +..++|||. |+|.|||++||++|++++++.|
T Consensus 331 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~-------~~~~lpFG~~G~r~C~G~~lA~~e~~~~la~l 403 (435)
T 2wm5_A 331 QDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN-------PNPHLGFGGGGAHFCLGANLARREIRVAFDEL 403 (435)
T ss_dssp SCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC-------SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHH
T ss_pred CCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999994 256899999 9999999999999999999999
Q ss_pred HHhCe-EEecCCCCccccccccccCCceEEE
Q 039939 373 VLNYR-WKTQADDYPIAYPYVEFRRGLLLEI 402 (411)
Q Consensus 373 l~~f~-~~~~~~~~~~~~~~~~~~~~~~v~~ 402 (411)
+++|+ +++.++........+..+.+++|++
T Consensus 404 l~~f~~~~l~~~~~~~~~~~~~~~~~lpv~~ 434 (435)
T 2wm5_A 404 RRQMPDVVATEEPARLLSQFIHGIKTLPVTW 434 (435)
T ss_dssp HHHCTTCEECSCCEECCCSSBCCEEECEEEC
T ss_pred HHhCCccEECCCccccccccccCccceeEEe
Confidence 99997 9998644333344566667777765
No 52
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=1.7e-56 Score=421.40 Aligned_cols=344 Identities=16% Similarity=0.214 Sum_probs=274.2
Q ss_pred CCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccC------Chh-----HHhhhccccccccC
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASY------PKP-----MHGILGKLSLLTVS 86 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~------~~~-----~~~~~g~~~l~~~~ 86 (411)
++|+.++.+++++ |||+++.+ ++.++++|++++.+++++.++. .|++.. ... ....++..+++..|
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCcccccC
Confidence 4689999999865 99999987 4577999999999999998764 343321 000 11122335788899
Q ss_pred ChhHHHHHHHHHhhhCCCCchhhhhHH----------------------------HHHHHHHHHHcCCCCChhHHHHHHH
Q 039939 87 GDLHKKLRNVAVSFIGASKSTPAFLHS----------------------------FTINLMVKHLLSIEPEEPIAFKILE 138 (411)
Q Consensus 87 g~~~~~~R~~~~~~~~~~~l~~~~~~~----------------------------~~~~~~~~~~fG~~~~~~~~~~~~~ 138 (411)
|+.|+++|+++++.|+++++.. +.. ++.++++. +||.+.++ ...
T Consensus 116 g~~h~~~R~~~~~~fs~~~l~~--~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~--- 187 (426)
T 3rwl_A 116 RPRHDEQRKAVSPIVAPANLAA--LEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLAT-LFDFPFEE--RRK--- 187 (426)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHH--HHHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG--THH---
T ss_pred chHHHHHHHHhhhhhCHHHHHH--HHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHH---
Confidence 9999999999999999887765 211 66666664 78876543 112
Q ss_pred HHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC---CCCHHHHHHHHHHHH
Q 039939 139 DFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR---SLSEEETVSIVLDIM 215 (411)
Q Consensus 139 ~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~~~~~~~~~ 215 (411)
+..+...+..++............++...+.+++.+++++++.. ...+|+++.|++.. +++++ ++..++..+
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~dll~~ll~~~~~~~ls~~-el~~~~~~l 262 (426)
T 3rwl_A 188 -LTRWSDVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVNK---DPGNDLISMLAHSPATRNMTPE-EYLGNVLLL 262 (426)
T ss_dssp -HHHHHHHHTCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTS---CCCSSHHHHHHHCGGGGGCCHH-HHHHHHHHH
T ss_pred -HHHHHHHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCHHHHHHhcccCCCCCHH-HHHHHHHHH
Confidence 22222222232222222344556677788899999999887322 24679999999754 48888 999999999
Q ss_pred HhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeecc
Q 039939 216 LGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIR 294 (411)
Q Consensus 216 ~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~ 294 (411)
++||+|||+ +++|++++|++||++|+++++|+ +||+++|+|+||++|+++.++|++++
T Consensus 263 ~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~---------------------~~l~a~i~E~LRl~p~~~~~~R~~~~ 321 (426)
T 3rwl_A 263 IVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP---------------------ALVETMVPEIIRWQTPLAHMRRTAIA 321 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCSBCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------------HhHHHHHHHHHHhcCccccCceecCC
Confidence 999999999 99999999999999999999883 48999999999999999999999999
Q ss_pred ccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHH
Q 039939 295 DVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVL 374 (411)
Q Consensus 295 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~ 374 (411)
|++++||.||||+.|+++.+++||||++|+||++|+|+||. +..++|||.|+|.|+|++||++|++++++.|++
T Consensus 322 d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~ 395 (426)
T 3rwl_A 322 DSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPR------PRQHLSFGFGIHRCVGNRLAEMQLRILWEEILT 395 (426)
T ss_dssp CEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC------TTCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHT
T ss_pred CeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCC------CCCccCCCCCCcCCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999994 457999999999999999999999999999999
Q ss_pred hC-eEEecCCCCccccccccccCCceEEEEe
Q 039939 375 NY-RWKTQADDYPIAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 375 ~f-~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (411)
+| ++++.++........+..+..++|+++|
T Consensus 396 ~f~~~~l~~~~~~~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 396 RFSRIEVMAEPERVRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp TCSEEEECSCCEECCCSSBCCEEECEEEEEC
T ss_pred hCccCeeCCCCcccccccccCcceeeEEEeC
Confidence 99 9999876554445556777788998875
No 53
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=6.2e-57 Score=422.39 Aligned_cols=335 Identities=17% Similarity=0.146 Sum_probs=264.6
Q ss_pred CCchhHHHHHhhhhccccccc----c-CC-CCeEEecChhhhHHHH-hcCCccccccCC-h----hHH-hhhcccccccc
Q 039939 19 NSTGSFLQQHCSIYGQVFKSH----L-FC-SPAIVSCDHELNMFIL-QNEEKYFQASYP-K----PMH-GILGKLSLLTV 85 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~----~-~~-~~~vvv~~pe~~~~vl-~~~~~~~~~~~~-~----~~~-~~~g~~~l~~~ 85 (411)
.+++.++.+| ++|||||+++ + ++ .++++++||+++++++ .++. +++... . .+. ......++++.
T Consensus 24 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (406)
T 1ued_A 24 CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRPQFTQSKSGAHVEAQFVGQISTY 100 (406)
T ss_dssp TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCCCC---------CGGGTTCGGGC
T ss_pred CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--ccccccccccccccccccccccccccC
Confidence 4678899999 9999999999 6 78 8999999999999999 5542 333221 1 111 11122478888
Q ss_pred CChhHHHHHHHHHhhhCCCCchhh----------hhH-----------------HHHHHHHHHHHcCCCCChhHHHHHHH
Q 039939 86 SGDLHKKLRNVAVSFIGASKSTPA----------FLH-----------------SFTINLMVKHLLSIEPEEPIAFKILE 138 (411)
Q Consensus 86 ~g~~~~~~R~~~~~~~~~~~l~~~----------~~~-----------------~~~~~~~~~~~fG~~~~~~~~~~~~~ 138 (411)
+|+.|+++|+++++.|+.++++.. +++ .+++++++ .+||.+.+ ....+.+
T Consensus 101 ~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~-~~~G~~~~--~~~~~~~ 177 (406)
T 1ued_A 101 DPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHALC-ELLGIPRD--DQREFVR 177 (406)
T ss_dssp CTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHHHHHHHH-HHHTCCHH--HHHHHHH
T ss_pred CCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHhHHHHHH-HHcCCCHH--HHHHHHH
Confidence 999999999999999998765540 000 06677777 46887643 2223333
Q ss_pred HHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc--CCCCHHHHHHHHHHHHH
Q 039939 139 DFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK--RSLSEEETVSIVLDIML 216 (411)
Q Consensus 139 ~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~--~~~~~~~~~~~~~~~~~ 216 (411)
.+..+.. . ....++..++...+.+++.++++++++.. ..|+++.+++. ..++++ ++..++..++
T Consensus 178 ~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~ls~~-ei~~~~~~l~ 243 (406)
T 1ued_A 178 RIRRNAD----L-----SRGLKARAADSAAFNRYLDNLLARQRADP----DDGLLGMIVRDHGDNVTDE-ELKGLCTALI 243 (406)
T ss_dssp HHHHCC------------CCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHGGGSCHH-HHHHHHHHHH
T ss_pred HHHHHHh----c-----cCCHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhcCCCCCHH-HHHHHHHHHH
Confidence 3322221 1 11235567778888899999998887654 57999999874 258888 9999999999
Q ss_pred hcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcc-cceeecc
Q 039939 217 GGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIR 294 (411)
Q Consensus 217 ~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~ 294 (411)
+||+|||+ +++|++++|++||++|+|+++|++ ||+|||+|+||++|+++. ++|++.+
T Consensus 244 ~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~ 302 (406)
T 1ued_A 244 LGGVETVAGMIGFGVLALLDNPGQIELLFESPE---------------------KAERVVNELVRYLSPVQAPNPRLAIK 302 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH---------------------HHHHHHHHHHHHHCSSCSCSCEEESS
T ss_pred HHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH---------------------HHHHHHHHHHhcCCCcccCcceecCC
Confidence 99999999 999999999999999999999864 589999999999999995 8999999
Q ss_pred ccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHH
Q 039939 295 DVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVL 374 (411)
Q Consensus 295 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~ 374 (411)
|++++||.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|+|++||++|++++++.|++
T Consensus 303 d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~ 375 (406)
T 1ued_A 303 DVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA-------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWR 375 (406)
T ss_dssp CEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC-------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred CEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC-------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 357999999999999999999999999999999
Q ss_pred hC-eEEecCCC-Ccc--ccccccccCCceEEE
Q 039939 375 NY-RWKTQADD-YPI--AYPYVEFRRGLLLEI 402 (411)
Q Consensus 375 ~f-~~~~~~~~-~~~--~~~~~~~~~~~~v~~ 402 (411)
+| ++++..+. ... ...++.+ .+++|++
T Consensus 376 ~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~ 406 (406)
T 1ued_A 376 RFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW 406 (406)
T ss_dssp HCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred hCCCceecCCcccccccccccccC-CeeeeeC
Confidence 99 69997432 222 2334566 7888763
No 54
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.9e-57 Score=428.27 Aligned_cols=346 Identities=19% Similarity=0.221 Sum_probs=273.3
Q ss_pred chhHHHHHhhhhcccc--ccc-cCCCCeEEecChhhhHHHHhcCCccccccCChhH----------Hhhhc-----cccc
Q 039939 21 TGSFLQQHCSIYGQVF--KSH-LFCSPAIVSCDHELNMFILQNEEKYFQASYPKPM----------HGILG-----KLSL 82 (411)
Q Consensus 21 ~~~~l~~~~~~yG~v~--~~~-~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~----------~~~~g-----~~~l 82 (411)
|+.++.++ ++||||+ ++. +++.++++|+++++++++++++ ..|+++..... ....| ..++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 78889888 6899999 998 6778999999999999999776 55655432111 11111 1478
Q ss_pred cccCChhHHHHHHHHHhhhCCCCchhh----------hhHH-----------------HHHHHHHHHHcCCCCChhHHHH
Q 039939 83 LTVSGDLHKKLRNVAVSFIGASKSTPA----------FLHS-----------------FTINLMVKHLLSIEPEEPIAFK 135 (411)
Q Consensus 83 ~~~~g~~~~~~R~~~~~~~~~~~l~~~----------~~~~-----------------~~~~~~~~~~fG~~~~~~~~~~ 135 (411)
+..||+.|+++|+++++.|++++++.. +++. +++++++.+ ||.+.++ ...
T Consensus 125 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~--~~~ 201 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQI-LGVPPED--EPK 201 (450)
T ss_dssp GGCCTTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG--HHH
T ss_pred ccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHH-cCCChhH--HHH
Confidence 889999999999999999998776650 1100 788888875 8976543 333
Q ss_pred HHHHHHHHHhhhcc----cCccCC--CcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHH
Q 039939 136 ILEDFQTFMKGFVS----LPVYIP--GTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEE 205 (411)
Q Consensus 136 ~~~~~~~~~~~~~~----~p~~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~ 205 (411)
+.+....+...... ++.++. ....++..++...+.+++.++++++++++ .+|+++.|++.. .++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~ls~~ 277 (450)
T 3tkt_A 202 MLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP----TDDVATVIANAVVDGEPMSDR 277 (450)
T ss_dssp HHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHTCEETTEECCHH
T ss_pred HHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhccccCCCCCHH
Confidence 44433333221111 111111 11235566777888889999998887654 678999998753 48888
Q ss_pred HHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCC
Q 039939 206 ETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNV 284 (411)
Q Consensus 206 ~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~ 284 (411)
++..++..+++||+|||+ +++|++++|++||++|+|+++|+ +||+|+|+|+||++|+
T Consensus 278 -ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~LRl~pp 335 (450)
T 3tkt_A 278 -DTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR---------------------NLLPGIVEEAIRWTTP 335 (450)
T ss_dssp -HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCS
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH---------------------HHHHHHHHHHHHhCCC
Confidence 999999999999999999 99999999999999999999985 3789999999999999
Q ss_pred CcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHH
Q 039939 285 VKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVE 364 (411)
Q Consensus 285 ~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~ 364 (411)
++.++|++++|++++||.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|||++||++|
T Consensus 336 ~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~-------~~~~l~FG~G~r~C~G~~lA~~e 408 (450)
T 3tkt_A 336 VQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRP-------ANRHLAFGAGSHQCLGLHLARLE 408 (450)
T ss_dssp BCEEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC-------TTCSSTTCCSTTCCTTHHHHHHH
T ss_pred ccCcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCC-------CCCCCCCCCcCccCccHHHHHHH
Confidence 99989999999999999999999999999999999999999999999994 45689999999999999999999
Q ss_pred HHHHHHHHHHhCe-EEecCCCCccccccccccCCceEEEEe
Q 039939 365 ISFFLHHLVLNYR-WKTQADDYPIAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 365 ~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (411)
++++++.|+++|+ +++.++........+..+..++|++++
T Consensus 409 ~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~g~~~lpv~~~~ 449 (450)
T 3tkt_A 409 MRVLLDVLLDRVDSLELAGEPKRVNSTFVGGFKSLPMRWKA 449 (450)
T ss_dssp HHHHHHHHHHHEEEEEESSCCEECCCSSBCCEEECEEEEEE
T ss_pred HHHHHHHHHHhCCCceeCCCcccccCcccCCcccceEEEec
Confidence 9999999999998 777754443344456667788888875
No 55
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=8.4e-57 Score=420.75 Aligned_cols=339 Identities=16% Similarity=0.135 Sum_probs=272.3
Q ss_pred CCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh---HHhhhccccccccCChhHHH
Q 039939 16 HKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP---MHGILGKLSLLTVSGDLHKK 92 (411)
Q Consensus 16 ~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~---~~~~~g~~~l~~~~g~~~~~ 92 (411)
....+|+.++.+|+++ |||+++.+++ +.++|++|+++++++.+. ..|+++.... .... +..+++..+|+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKV-MQFIPLQQDGAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHH-HCCTTTTCCHHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccc-cccCccccCCcHHHH
Confidence 4456899999999988 9999998874 589999999999999765 4555443211 1111 225678899999999
Q ss_pred HHHHHHhhhCCCCchhh--hhHH------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhh
Q 039939 93 LRNVAVSFIGASKSTPA--FLHS------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKG 146 (411)
Q Consensus 93 ~R~~~~~~~~~~~l~~~--~~~~------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~ 146 (411)
+|+++++.|+.+++... .+.+ ++.++++. +||.+.++ ...+.+.+..+...
T Consensus 97 ~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~~~~~~~~~~~~ 173 (396)
T 3oft_A 97 FRTPVMKGLASRFVVALEPKVQAVARKLMESLRPRGSCDFVSDFAEILPLNIFLT-LIDVPLED--RPRLRQLGVQLTRP 173 (396)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--HHHHHHHHHHHHSC
T ss_pred HHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHhCC
Confidence 99999999998877651 0111 55555554 57866542 33333333333211
Q ss_pred hcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHH
Q 039939 147 FVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETT 222 (411)
Q Consensus 147 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~t 222 (411)
...++..++.+.+.+++.++++++++.. ..|+++.+++.. .++++ ++..++..+++||+||
T Consensus 174 ----------~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~l~~~-el~~~~~~l~~AG~dT 238 (396)
T 3oft_A 174 ----------DGSMTVEQLKQAADDYLWPFIEKRMAQP----GDDLFSRILSEPVGGRPWTVD-EARRMCRNLLFGGLDT 238 (396)
T ss_dssp ----------CSSCCHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHTSCBTTBCCCHH-HHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhccCCCCCHH-HHHHHHHHHHHHhhHH
Confidence 1123456777888999999999887664 679999999763 48888 9999999999999999
Q ss_pred HH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCE
Q 039939 223 AT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEY 301 (411)
Q Consensus 223 t~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~ 301 (411)
|+ +++|++++|++||++|+++++|++ ||+|+|+|+||++|++ .++|++.+|++++||
T Consensus 239 ta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~~~g~ 296 (396)
T 3oft_A 239 VAAMIGMVALHLARHPEDQRLLRERPD---------------------LIPAAADELMRRYPTV-AVSRNAVADVDADGV 296 (396)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHCCCB-EEEEEESSCEEETTE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------hHHHHHHHHHHhcCcc-cCceecCCCEEECCE
Confidence 99 999999999999999999999964 7899999999999999 889999999999999
Q ss_pred EeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEe
Q 039939 302 LIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKT 380 (411)
Q Consensus 302 ~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~ 380 (411)
.||||+.|+++.+++||||++|+||++|+||||+ .+..++|||+|+|.|||++||++|++++++.|+++| ++++
T Consensus 297 ~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~-----~~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l 371 (396)
T 3oft_A 297 TIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGL-----APIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFAL 371 (396)
T ss_dssp EECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCC-----CGGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred EECCCCEEEeChHHhCCCcccCCCcCccCCCCCC-----CCCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceE
Confidence 9999999999999999999999999999999997 456799999999999999999999999999999999 9999
Q ss_pred cCCCCcc-ccccccccCCceEEEE
Q 039939 381 QADDYPI-AYPYVEFRRGLLLEIE 403 (411)
Q Consensus 381 ~~~~~~~-~~~~~~~~~~~~v~~~ 403 (411)
.+++... ....+..+..++|++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~lpv~~~ 395 (396)
T 3oft_A 372 APDKAVTMKGGNVGACTALPLVWR 395 (396)
T ss_dssp CSSSCCEEECSSBCEEEECEEEEC
T ss_pred CCCCCceeccccccCcccceEEeC
Confidence 8665433 2334455566777763
No 56
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=3e-56 Score=418.58 Aligned_cols=338 Identities=18% Similarity=0.197 Sum_probs=268.5
Q ss_pred CCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccCCh--h---HHhhhccccccccCChhHH
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYPK--P---MHGILGKLSLLTVSGDLHK 91 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~--~---~~~~~g~~~l~~~~g~~~~ 91 (411)
..+|+.++.+| ++||||+++++ ++.++++++||+++++++.++. |+++... . +....+..++++.+|+.|+
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~ 112 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGR--FVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS 112 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCTT--EESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCCC--cccCccccccccccCcccccccCccCCchHHH
Confidence 45788999999 89999999997 7899999999999999998652 3332111 0 1121233678889999999
Q ss_pred HHHHHHHhhhCCCCchh----------hhhH-------------H----HHHHHHHHHHcCCCCChhHHHHHHHHHHHHH
Q 039939 92 KLRNVAVSFIGASKSTP----------AFLH-------------S----FTINLMVKHLLSIEPEEPIAFKILEDFQTFM 144 (411)
Q Consensus 92 ~~R~~~~~~~~~~~l~~----------~~~~-------------~----~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~ 144 (411)
++|+++++.|+.++++. .+++ . +++++++. +||.+.++ ...+.+ +.
T Consensus 113 ~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~----~~ 185 (417)
T 2y5n_A 113 RLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICE-LLGVPSAD--HDRFTR----WS 185 (417)
T ss_dssp HHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHH----HH
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH--HHHHHH----HH
Confidence 99999999999876554 0000 0 66777776 57876643 222222 22
Q ss_pred hhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcch
Q 039939 145 KGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYE 220 (411)
Q Consensus 145 ~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~ 220 (411)
..+.... ....++..++...+.+++.++++++++.. .+|+++.+++.. .++++ ++..++..+++||+
T Consensus 186 ~~~~~~~----~~~~~~~~~~~~~l~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~ls~~-ei~~~~~~l~~AG~ 256 (417)
T 2y5n_A 186 GAFLSTA----EVTAEEMQEAAEQAYAYMGDLIDRRRKEP----TDDLVSALVQARDQQDSLSEQ-ELLDLAIGLLVAGY 256 (417)
T ss_dssp HTTSTTC----CCCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCBTTBCCCHH-HHHHHHHHHHHHHH
T ss_pred HHHhccc----CCCHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhhhccCCCCCHH-HHHHHHHHHHHHhH
Confidence 2222111 01124566777888899999998887654 579999999753 48888 99999999999999
Q ss_pred HHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc--ccceeeccccc
Q 039939 221 TTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK--FVHREAIRDVK 297 (411)
Q Consensus 221 ~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~--~~~R~~~~d~~ 297 (411)
|||+ +++|++++|++||++|+++++|+ .||+|||+|+||++|+++ .++|++.+|++
T Consensus 257 eTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~ 315 (417)
T 2y5n_A 257 ESTTTQIADFVYLLMTRPELRRQLLDRP---------------------ELIPSAVEELTRWVPLGVGTAFPRYAVEDVT 315 (417)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHCCCBSSCCSCEEESSCEE
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHHhcCCccccccceEeCCCEE
Confidence 9999 99999999999999999999884 279999999999999999 78999999999
Q ss_pred cCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-
Q 039939 298 FKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY- 376 (411)
Q Consensus 298 l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f- 376 (411)
++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|||++||++|++++++.|+++|
T Consensus 316 l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~ 388 (417)
T 2y5n_A 316 LRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP-------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLP 388 (417)
T ss_dssp ETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS-------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCT
T ss_pred ECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC-------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999982 4689999999999999999999999999999999
Q ss_pred eEEecCCC-Ccc--ccccccccCCceEEE
Q 039939 377 RWKTQADD-YPI--AYPYVEFRRGLLLEI 402 (411)
Q Consensus 377 ~~~~~~~~-~~~--~~~~~~~~~~~~v~~ 402 (411)
++++.++. ... ...++..+..++|++
T Consensus 389 ~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 417 (417)
T 2y5n_A 389 GIRLGIPETQLRWSEGMLLRGPLELPVVW 417 (417)
T ss_dssp TCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred CcEeCCCCccceeccCcccCCcceeEEeC
Confidence 59987542 222 233456677787763
No 57
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=2.4e-56 Score=417.25 Aligned_cols=335 Identities=18% Similarity=0.214 Sum_probs=267.0
Q ss_pred CCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccCCh-h-HHhhhcccc--ccccCC-----
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYPK-P-MHGILGKLS--LLTVSG----- 87 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~-~~~~~g~~~--l~~~~g----- 87 (411)
..+|+.++.++ ++||||+++++ ++.++++|++|+++++++.++. |+..... . +.......+ +++.+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 101 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDER--IGRTHPDPPSAAQYVRSPFLDLLISDADAESG 101 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTT--EESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCC--CCCCccccccCCcccccccccceeeCCCCCCC
Confidence 35788899999 89999999997 7889999999999999998752 4433221 1 122212245 888899
Q ss_pred -hhHHHHHHHHHhhhCCCCchhh----------hhH-----------------HHHHHHHHHHHcCCCCChhHHHHHHHH
Q 039939 88 -DLHKKLRNVAVSFIGASKSTPA----------FLH-----------------SFTINLMVKHLLSIEPEEPIAFKILED 139 (411)
Q Consensus 88 -~~~~~~R~~~~~~~~~~~l~~~----------~~~-----------------~~~~~~~~~~~fG~~~~~~~~~~~~~~ 139 (411)
+.|+++|+++++.|+.++++.. +++ .+++++++. +||.+.++ ...+.+.
T Consensus 102 ~~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~ 178 (404)
T 2xbk_A 102 RRQHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCE-VIGVPPQR--RAELTTL 178 (404)
T ss_dssp HHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG--HHHHHHH
T ss_pred CchHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH--HHHHHHH
Confidence 9999999999999998766540 000 066777776 68877643 2233333
Q ss_pred HHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccCCCCHHHHHHHHHHHHHhcc
Q 039939 140 FQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKRSLSEEETVSIVLDIMLGGY 219 (411)
Q Consensus 140 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~ag 219 (411)
+..+. ... .. .+..++...+.+++.++++++++.. .+|+++.+ +...++++ ++..++..+++||
T Consensus 179 ~~~~~----~~~----~~--p~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~l-~~~~ls~~-ei~~~~~~l~~AG 242 (404)
T 2xbk_A 179 LAGIA----KLD----DR--EGAVRAQDDLFGYVAGLVEHKRAEP----GPDIISRL-NDGELTED-RVAHLAMGLLFAG 242 (404)
T ss_dssp HHHHT----BSS----CH--HHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHH-HSSSCCHH-HHHHHHHHHHHHT
T ss_pred HHHHH----hcc----Cc--HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHh-hcCCCCHH-HHHHHHHHHHHhc
Confidence 33222 211 00 1556677888899999998887653 56899988 43368888 9999999999999
Q ss_pred hHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc--ccceeecccc
Q 039939 220 ETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK--FVHREAIRDV 296 (411)
Q Consensus 220 ~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~--~~~R~~~~d~ 296 (411)
+|||+ +++|++++|++||++|+++++|++ ||+|||+|+||++|+++ .++|++.+|+
T Consensus 243 ~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~ 301 (404)
T 2xbk_A 243 LDSVASIMDNGVVLLAAHPDQRAAALADPD---------------------VMARAVEEVLRTARAGGSVLPPRYASEDM 301 (404)
T ss_dssp THHHHHHHHHHHHHHHHCHHHHHHHHHCHH---------------------HHHHHHHHHHHHSCSSCCBCSCEEESSCE
T ss_pred hHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCCCccccccceeECCCe
Confidence 99999 999999999999999999999964 68999999999999999 7899999999
Q ss_pred ccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC
Q 039939 297 KFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY 376 (411)
Q Consensus 297 ~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f 376 (411)
+++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus 302 ~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f 374 (404)
T 2xbk_A 302 EFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP-------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRL 374 (404)
T ss_dssp EETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS-------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHC
T ss_pred eECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC-------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999983 4689999999999999999999999999999999
Q ss_pred -eEEecCCC-Cc--cccccccccCCceEEE
Q 039939 377 -RWKTQADD-YP--IAYPYVEFRRGLLLEI 402 (411)
Q Consensus 377 -~~~~~~~~-~~--~~~~~~~~~~~~~v~~ 402 (411)
++++.++. .. ....++..+.+++|++
T Consensus 375 ~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 404 (404)
T 2xbk_A 375 PELRPELPVEQLRLKEGQLSGGFAELRVVW 404 (404)
T ss_dssp TTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred CcceecCCCCcceeccCcccCCcceeeeeC
Confidence 69997642 22 2233456777888763
No 58
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=8.4e-57 Score=421.96 Aligned_cols=341 Identities=18% Similarity=0.241 Sum_probs=272.2
Q ss_pred CCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccC--ChhHH--------hhh---c-ccccc
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASY--PKPMH--------GIL---G-KLSLL 83 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~--~~~~~--------~~~---g-~~~l~ 83 (411)
.+|+.++.++ ++||||+++++ ++.++++++||+++++++.++. ++... ..... .++ + ..+++
T Consensus 17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (411)
T 1gwi_A 17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSML 93 (411)
T ss_dssp SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGG
T ss_pred CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccc
Confidence 4788999999 89999999997 7889999999999999998754 22221 01000 011 2 35788
Q ss_pred ccCChhHHHHHHHHHhhhCCCCchhh--hhH-------------------------HHHHHHHHHHHcCCCCChhHHHHH
Q 039939 84 TVSGDLHKKLRNVAVSFIGASKSTPA--FLH-------------------------SFTINLMVKHLLSIEPEEPIAFKI 136 (411)
Q Consensus 84 ~~~g~~~~~~R~~~~~~~~~~~l~~~--~~~-------------------------~~~~~~~~~~~fG~~~~~~~~~~~ 136 (411)
+.+|+.|+++|++++++|+.++++.. .++ .+++++++. +||.+.++ ...+
T Consensus 94 ~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~ 170 (411)
T 1gwi_A 94 TVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR--LPRL 170 (411)
T ss_dssp GCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHH
T ss_pred cCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHH-HhCCCHHH--HHHH
Confidence 89999999999999999988755430 000 166788885 68887643 2333
Q ss_pred HHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHH
Q 039939 137 LEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVL 212 (411)
Q Consensus 137 ~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~ 212 (411)
.+.+..+... . ...++..++...+.+++.++++++++++ ..|+++.+++.. .++++ ++..++
T Consensus 171 ~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~l~~~-~i~~~~ 236 (411)
T 1gwi_A 171 KVLFEKFFST----Q-----TPPEEVVATLTELASIMTDTVAAKRAAP----GDDLTSALIQASENGDHLTDA-EIVSTL 236 (411)
T ss_dssp HHHHHHHHCT----T-----SCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHCCBTTBCCCHH-HHHHHH
T ss_pred HHHHHHHhcc----C-----CChHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhcccCCCCCHH-HHHHHH
Confidence 3333333221 0 1224566777888899999998887544 579999999742 48888 999999
Q ss_pred HHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcc-cce
Q 039939 213 DIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHR 290 (411)
Q Consensus 213 ~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R 290 (411)
..+++||+|||+ +++|++++|++||++|+++++|+ +||+|||+|+||++|+++. ++|
T Consensus 237 ~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~~~~R 295 (411)
T 1gwi_A 237 QLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE---------------------AEWSAVVEETLRFSTPTSHVLIR 295 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS---------------------SCHHHHHHHHHHHSCSBCCEEEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh---------------------HHHHHHHHHHHHhCCcccCCcee
Confidence 999999999999 99999999999999999999862 3699999999999999995 889
Q ss_pred eeccccccCCEEeCCCcEEecchhhhccCCCCC-CCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHH
Q 039939 291 EAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLH-ENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFL 369 (411)
Q Consensus 291 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l 369 (411)
++.+|++++||.||||+.|+++.+++||||++| +||++|+||||. ...++|||.|+|.|+|++||++|+++++
T Consensus 296 ~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~------~~~~lpFG~G~r~C~G~~lA~~e~~~~l 369 (411)
T 1gwi_A 296 FAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTS------GNRHISFGHGPHVCPGAALSRMEAGVAL 369 (411)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCC------SSCCCTTCCSTTCCTTHHHHHHHHHHHH
T ss_pred eeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCC------CCCcccCCCCcccCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999994 3579999999999999999999999999
Q ss_pred HHHHHhC-eEEecCCC-Ccc--ccccccccCCceEEEEeCC
Q 039939 370 HHLVLNY-RWKTQADD-YPI--AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 370 ~~ll~~f-~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~r~ 406 (411)
+.|+++| ++++..+. ... ...++..+.+++|++++|.
T Consensus 370 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~ 410 (411)
T 1gwi_A 370 PALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH 410 (411)
T ss_dssp HHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred HHHHHhCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence 9999999 79987432 222 2234677889999998883
No 59
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=1.1e-56 Score=420.75 Aligned_cols=335 Identities=16% Similarity=0.175 Sum_probs=263.9
Q ss_pred CCchhHHHHHhhhhcccccccc-CCCC-eEEecChhhhHHHHhcCCccccccCChh-----HHh-hhc-cccccccCChh
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHL-FCSP-AIVSCDHELNMFILQNEEKYFQASYPKP-----MHG-ILG-KLSLLTVSGDL 89 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~-~~~~-~vvv~~pe~~~~vl~~~~~~~~~~~~~~-----~~~-~~g-~~~l~~~~g~~ 89 (411)
.+|+.++.+++ +||||+++.+ +|.+ +++|++|++++++|.+. .|+++.... ... ..+ ..++++.+|+.
T Consensus 24 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 100 (406)
T 1s1f_A 24 SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTRLAPHFIPARGAVGFLDPPD 100 (406)
T ss_dssp TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCBSSSSCSSCTTSGGGCCTTH
T ss_pred cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCcccccccccccccccccCCchH
Confidence 47888999885 8999999986 5666 99999999999999863 354432211 111 211 36788899999
Q ss_pred HHHHHHHHHhhhCCCCchhh----------h---hH-H-------------HHHHHHHHHHcCCCCChhHHHHHHHHHHH
Q 039939 90 HKKLRNVAVSFIGASKSTPA----------F---LH-S-------------FTINLMVKHLLSIEPEEPIAFKILEDFQT 142 (411)
Q Consensus 90 ~~~~R~~~~~~~~~~~l~~~----------~---~~-~-------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 142 (411)
|+++|+++++.|+.++++.. + +. . +++++++. +||.+.++ ...+......
T Consensus 101 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~~~~ 177 (406)
T 1s1f_A 101 HTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICE-LMGVPATD--RHSMHTWTQL 177 (406)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHHHHHHHH
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHHHHHH-HhCCCHHH--HHHHHHHHHH
Confidence 99999999999998766540 0 00 0 67788877 58987653 2233333333
Q ss_pred HHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc---CCCCHHHHHHHHHHHHHhcc
Q 039939 143 FMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK---RSLSEEETVSIVLDIMLGGY 219 (411)
Q Consensus 143 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~---~~~~~~~~~~~~~~~~~~ag 219 (411)
+..... + + ++..++...+.+++.++++++++.. ..|+++.+++. ..++++ ++..++..+++||
T Consensus 178 ~~~~~~--~---~----~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~ls~~-el~~~~~~l~~AG 243 (406)
T 1s1f_A 178 ILSSSH--G---A----EVSERAKNEMNAYFSDLIGLRSDSA----GEDVTSLLGAAVGRDEITLS-EAVGLAVLLQIGG 243 (406)
T ss_dssp HHHHHT--T---C----CCCHHHHTHHHHHHHHHHHTSCCSC----CCSHHHHHHHHHHTTSSCHH-HHHHHHHHHHHHT
T ss_pred HHhccC--C---H----HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhcccCCCHH-HHHHHHHHHHHhh
Confidence 222111 1 1 1234566777888888888766443 56999999875 358888 9999999999999
Q ss_pred hHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc--ccceeecccc
Q 039939 220 ETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK--FVHREAIRDV 296 (411)
Q Consensus 220 ~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~--~~~R~~~~d~ 296 (411)
|||+ +++|++++|++||++|+|+++|++ ||+|||+|+||++|+++ .++|++.+|+
T Consensus 244 -eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~ 301 (406)
T 1s1f_A 244 -EAVTNNSGQMFHLLLSRPELAERLRSEPE---------------------IRPRAIDELLRWIPHRNAVGLSRIALEDV 301 (406)
T ss_dssp -THHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCCBSSCCCCEEESSCE
T ss_pred -HHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhCCCccccCcceEeCCCE
Confidence 9999 999999999999999999999852 78999999999999999 7899999999
Q ss_pred ccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC
Q 039939 297 KFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY 376 (411)
Q Consensus 297 ~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f 376 (411)
+++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus 302 ~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f 374 (406)
T 1s1f_A 302 EIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP-------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRV 374 (406)
T ss_dssp EETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC---------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHS
T ss_pred EECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC-------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999995 4589999999999999999999999999999999
Q ss_pred -eEEecCCC-Cc--cccccccccCCceEEE
Q 039939 377 -RWKTQADD-YP--IAYPYVEFRRGLLLEI 402 (411)
Q Consensus 377 -~~~~~~~~-~~--~~~~~~~~~~~~~v~~ 402 (411)
++++.++. .. .....+..+.+++|++
T Consensus 375 ~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 404 (406)
T 1s1f_A 375 PGLKLAVAPEDVPFKKGALIRGPEALPVTW 404 (406)
T ss_dssp TTCEESSCGGGSCBCSSCSBCCBSCCEEEC
T ss_pred CCcEeCCCCccceeccCcccCCcceeEEee
Confidence 69998653 22 2234567778888886
No 60
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=6.1e-56 Score=416.42 Aligned_cols=337 Identities=16% Similarity=0.205 Sum_probs=266.5
Q ss_pred CCCchhHHHHHhhhh-cccccccc-CCCCeEEecChhhhHHHHhcCCccccccCC-hhHHh-------hh-ccccccccC
Q 039939 18 SNSTGSFLQQHCSIY-GQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYP-KPMHG-------IL-GKLSLLTVS 86 (411)
Q Consensus 18 ~~~~~~~l~~~~~~y-G~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~-~~~~~-------~~-g~~~l~~~~ 86 (411)
..+|+.++.+| ++| ||||++++ ++.++++++++++++++|.++. ++.... ..+.. .. ...++++.+
T Consensus 23 ~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (412)
T 2zbx_A 23 PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPATSPRFEAVRESPQAFIGLD 99 (412)
T ss_dssp TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCCCSGGGC----CCCCGGGCC
T ss_pred ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccccccccccccccccccccCC
Confidence 35788999999 788 99999998 7889999999999999998653 222211 00100 10 224688889
Q ss_pred ChhHHHHHHHHHhhhCCCCchhh----------hhHH-----------------HHHHHHHHHHcCCCCChhHHHHHHHH
Q 039939 87 GDLHKKLRNVAVSFIGASKSTPA----------FLHS-----------------FTINLMVKHLLSIEPEEPIAFKILED 139 (411)
Q Consensus 87 g~~~~~~R~~~~~~~~~~~l~~~----------~~~~-----------------~~~~~~~~~~fG~~~~~~~~~~~~~~ 139 (411)
|+.|+++|+++++.|+.++++.. +++. +++++++. +||.+.++ ...+.+.
T Consensus 100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~ 176 (412)
T 2zbx_A 100 PPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSMVICR-LLGVPYAD--HEFFQDA 176 (412)
T ss_dssp TTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHHHHH
T ss_pred cHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHH
Confidence 99999999999999998766540 1100 66777775 68887643 2233333
Q ss_pred HHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHH
Q 039939 140 FQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIM 215 (411)
Q Consensus 140 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~ 215 (411)
+..+.. .+ .. ++..++...+.+++.+++++++++. ..|+++.+++.. .++++ ++..++..+
T Consensus 177 ~~~~~~----~~----~~--~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~ls~~-ei~~~~~~~ 241 (412)
T 2zbx_A 177 SKRLVQ----ST----DA--QSALTARNDLAGYLDGLITQFQTEP----GAGLVGALVADQLANGEIDRE-ELISTAMLL 241 (412)
T ss_dssp HHHHHH----CS----SH--HHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHTTTTTTSSCHH-HHHHHHHHH
T ss_pred HHHHhc----cC----cH--HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhcccCCCCCHH-HHHHHHHHH
Confidence 333222 11 11 5566777888899999998887654 579999999743 48888 999999999
Q ss_pred HhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-ccceeec
Q 039939 216 LGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FVHREAI 293 (411)
Q Consensus 216 ~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~ 293 (411)
++||+|||+ +++|++++|++||++|+++++|+ .||+|||+|+||++|+++ .++|++.
T Consensus 242 ~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~~~~R~~~ 300 (412)
T 2zbx_A 242 LIAGHETTASMTSLSVITLLDHPEQYAALRADR---------------------SLVPGAVEELLRYLAIADIAGGRVAT 300 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCCCGGGCEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHHhCCccccccceeeC
Confidence 999999999 99999999999999999999874 279999999999999999 5899999
Q ss_pred cccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHH
Q 039939 294 RDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLV 373 (411)
Q Consensus 294 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll 373 (411)
+|++++||.||||+.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|+|++||++|++++++.|+
T Consensus 301 ~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll 373 (412)
T 2zbx_A 301 ADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS-------ARHHLAFGFGVHQCLGQNLARLELEVILNALM 373 (412)
T ss_dssp SCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC-------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred CCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCC-------CCCccCCCCCCCcCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997 35699999999999999999999999999999
Q ss_pred HhC-eEEecCCC-Cccc--cccccccCCceEEEE
Q 039939 374 LNY-RWKTQADD-YPIA--YPYVEFRRGLLLEIE 403 (411)
Q Consensus 374 ~~f-~~~~~~~~-~~~~--~~~~~~~~~~~v~~~ 403 (411)
++| ++++..+. .... ..++.....++|+.+
T Consensus 374 ~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~ 407 (412)
T 2zbx_A 374 DRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH 407 (412)
T ss_dssp HHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred HhcCcccccCCcccceeccccccCCcceeeeecc
Confidence 999 79987542 2222 233455666777654
No 61
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=5.2e-57 Score=434.85 Aligned_cols=360 Identities=18% Similarity=0.245 Sum_probs=261.5
Q ss_pred CCCcccchhhhhcccCCCCCchhHHHHHhhhhcc-ccccccCCCCe-------EEecChhhhHHHHhcCC----cccccc
Q 039939 1 MGWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQ-VFKSHLFCSPA-------IVSCDHELNMFILQNEE----KYFQAS 68 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~-v~~~~~~~~~~-------vvv~~pe~~~~vl~~~~----~~~~~~ 68 (411)
+|||+|||++++.......+++.++.+++++||+ ||++++++.++ +++.+++..+.++.... ..+...
T Consensus 34 ~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k~~~~~~~ 113 (495)
T 3dsk_A 34 YGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGT 113 (495)
T ss_dssp CCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSS
T ss_pred CCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccccccccccccc
Confidence 4689999999987543446889999999999999 99999999888 56667776666664422 233334
Q ss_pred CChhHHhhhcc---ccccccCChhHHHHHHHHHhhhCCCCchh----------hhhH-------------------HHHH
Q 039939 69 YPKPMHGILGK---LSLLTVSGDLHKKLRNVAVSFIGASKSTP----------AFLH-------------------SFTI 116 (411)
Q Consensus 69 ~~~~~~~~~g~---~~l~~~~g~~~~~~R~~~~~~~~~~~l~~----------~~~~-------------------~~~~ 116 (411)
++... .++|. .+++..+|+.|+++|+++.+.|+... .. .+++ .+++
T Consensus 114 ~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~vdl~~~~~~~~~ 191 (495)
T 3dsk_A 114 YMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAF 191 (495)
T ss_dssp SCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSEESHHHHHHHHH
T ss_pred CCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHH
Confidence 44334 56662 35566799999999999999997643 22 0010 1889
Q ss_pred HHHHHHHcCCCCChhH-HHHHHHHHHHHHhhhcccCc---cCCCcccHHHHHHHHHHHHHHHHHHHHHHh----------
Q 039939 117 NLMVKHLLSIEPEEPI-AFKILEDFQTFMKGFVSLPV---YIPGTHYANAVKARARLSRTVREIVRERQH---------- 182 (411)
Q Consensus 117 ~~~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~p~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 182 (411)
++++..+||.+.+... ...+...+..+.. ....|. .+|. ++.+++.+++.
T Consensus 192 ~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~p~---------------~~~~~~~~~~~~~~~~~~~~~ 255 (495)
T 3dsk_A 192 NFLARAFYGTNPADTKLKADAPGLITKWVL-FNLHPLLSIGLPR---------------VIEEPLIHTFSLPPALVKSDY 255 (495)
T ss_dssp HHHHHHHHSCCGGGSTTTTCHHHHHHHHHH-HHHGGGCCCSSCH---------------HHHHHHHSSSCCCGGGGHHHH
T ss_pred HHHHHHHcCCCcchhhhhhhHHHHHHHHHH-HhhhhHhHhccHH---------------HHHHHHHHhhcccchhhhhhH
Confidence 9999999998765421 1111111111111 111122 2330 11111111000
Q ss_pred -h---cccCCCCchHHHHHccCCCCHHHHHHHHHHHH-HhcchHHHH-HHHHHHHHHhh-ChHHHHHHHHHHHHHhccCC
Q 039939 183 -E---NMRAGEGDFLDVILKKRSLSEEETVSIVLDIM-LGGYETTAT-LLALIVYFLAH-APAVFQKLKEEHRAIRKSKQ 255 (411)
Q Consensus 183 -~---~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~-~~ag~~tt~-~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~~~ 255 (411)
. .......++++.. +..+++++ ++..++..+ ++||++||+ +++|++++|+. ||++|++|++|++++++.+
T Consensus 256 ~~~~~~~~~~~~~ll~~~-~~~~l~~~-ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~- 332 (495)
T 3dsk_A 256 QRLYEFFLESAGEILVEA-DKLGISRE-EATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSN- 332 (495)
T ss_dssp HHHHHHHHHHCHHHHHHH-HHTTCCHH-HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCHH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccC-
Confidence 0 0001123444444 33468888 777755555 499999999 99999999996 9999999999999998764
Q ss_pred CCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeecccccc----CCEEeCCCcEEecchhhhccCCCCCCCCCCCCC
Q 039939 256 DEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKF----KEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNP 331 (411)
Q Consensus 256 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P 331 (411)
+..++++++.+||||+|||+|+||++|+++...|++.+|+++ +||.||||+.|+++.+++||||++|+||++|+|
T Consensus 333 -~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P 411 (495)
T 3dsk_A 333 -GGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVP 411 (495)
T ss_dssp -TTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCT
T ss_pred -CCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCC
Confidence 367999999999999999999999999999988889999999 599999999999999999999999999999999
Q ss_pred CCCCCCccCCCCceeec---------cCCCCCCccHHHHHHHHHHHHHHHHHhCeEEecC
Q 039939 332 SRWTDKASVISKRVMPF---------GGGPRLCPGAELAKVEISFFLHHLVLNYRWKTQA 382 (411)
Q Consensus 332 ~Rfl~~~~~~~~~~~~F---------G~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~ 382 (411)
|||++++......+++| |+|+|.|||++||++|++++++.|+++|++...+
T Consensus 412 ~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 471 (495)
T 3dsk_A 412 ERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE 471 (495)
T ss_dssp TTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence 99998642223344444 4555999999999999999999999999987654
No 62
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=3.5e-56 Score=417.70 Aligned_cols=338 Identities=18% Similarity=0.232 Sum_probs=267.9
Q ss_pred CCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCcccccc----CCh--hHH---hhh---ccccccccC
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQAS----YPK--PMH---GIL---GKLSLLTVS 86 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~----~~~--~~~---~~~---g~~~l~~~~ 86 (411)
.+|+.++.+| ++||||+++++++.++++++||+++++++.++. ++.. +.. ... .++ +..++++.+
T Consensus 15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (408)
T 1odo_A 15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAY 91 (408)
T ss_dssp TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCC
T ss_pred CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccccccC
Confidence 5788999999 899999999988889999999999999998653 2211 111 010 011 235788899
Q ss_pred ChhHHHHHHHHHhhhCCCCchhh----------hh---H----------------HHHHHHHHHHHcCCCCChhHHHHHH
Q 039939 87 GDLHKKLRNVAVSFIGASKSTPA----------FL---H----------------SFTINLMVKHLLSIEPEEPIAFKIL 137 (411)
Q Consensus 87 g~~~~~~R~~~~~~~~~~~l~~~----------~~---~----------------~~~~~~~~~~~fG~~~~~~~~~~~~ 137 (411)
|+.|+++|++++++|+..+++.. ++ . .+++++++. +||.+.++ ...+.
T Consensus 92 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~ 168 (408)
T 1odo_A 92 GPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR--RDGFR 168 (408)
T ss_dssp HHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH--HHHHH
T ss_pred ChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH--HHHHH
Confidence 99999999999999998765540 00 0 066777774 68876432 22333
Q ss_pred HHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc-------CCCCHHHHHHH
Q 039939 138 EDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK-------RSLSEEETVSI 210 (411)
Q Consensus 138 ~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~-------~~~~~~~~~~~ 210 (411)
+.+..+.. . . ...++..++...+.+++.++++++++.. ..|+++.+++. ..++++ ++..
T Consensus 169 ~~~~~~~~----~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~~~~l~~~-ei~~ 234 (408)
T 1odo_A 169 ALVDGVFD----T--T---LDQAEAQANTARLYEVLDQLIAAKRATP----GDDMTSLLIAARDDEGDGDRLSPE-ELRD 234 (408)
T ss_dssp HHHHHHHC----T--T---CCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHCC-----CCCHH-HHHH
T ss_pred HHHHHHhc----c--c---CCHHHHHHHHHHHHHHHHHHHHHHhhCC----CCCHHHHHHHhcccccccCCCCHH-HHHH
Confidence 33333222 1 0 1224566777888899999998887653 47899999862 248888 9999
Q ss_pred HHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcc-c
Q 039939 211 VLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKF-V 288 (411)
Q Consensus 211 ~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~ 288 (411)
++..+++||+|||+ +++|++++|++||++|+|+++|+ +||+|||+|+||++|+++. +
T Consensus 235 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~lRl~p~~~~~~ 293 (408)
T 1odo_A 235 TLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE---------------------VTWADVVEETLRHEPAVKHLP 293 (408)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS---------------------SCHHHHHHHHHHHSCSBSCEE
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------HHHHHHHHHHHhhCCCccCCc
Confidence 99999999999999 99999999999999999999872 3689999999999999995 8
Q ss_pred ceeeccccccC-CEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHH
Q 039939 289 HREAIRDVKFK-EYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISF 367 (411)
Q Consensus 289 ~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~ 367 (411)
+|++.+|++++ ||.||||+.|+++.+++||||++|+||++|+|||+ ...++|||.|+|.|+|++||++|+++
T Consensus 294 ~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-------~~~~~pFG~G~r~C~G~~lA~~e~~~ 366 (408)
T 1odo_A 294 LRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT-------VKEHLAFGHGVHFCLGAPLARMEVTL 366 (408)
T ss_dssp EEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS-------CCCCCTTCSSTTSCTTHHHHHHHHHH
T ss_pred ceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC-------CCCCCCCCCCCccCCCHHHHHHHHHH
Confidence 89999999999 99999999999999999999999999999999994 35799999999999999999999999
Q ss_pred HHHHHHHhC-eEEecCC-CCcc--ccccccccCCceEEEEe
Q 039939 368 FLHHLVLNY-RWKTQAD-DYPI--AYPYVEFRRGLLLEIER 404 (411)
Q Consensus 368 ~l~~ll~~f-~~~~~~~-~~~~--~~~~~~~~~~~~v~~~~ 404 (411)
+++.|+++| ++++..+ +... ...++.++.+++|++++
T Consensus 367 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 367 ALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp HHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred HHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence 999999999 7998743 2222 23456778899998865
No 63
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=7e-56 Score=415.76 Aligned_cols=336 Identities=17% Similarity=0.188 Sum_probs=267.4
Q ss_pred CCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccCC--h-----hHHhhh----cccc-ccc
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASYP--K-----PMHGIL----GKLS-LLT 84 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~--~-----~~~~~~----g~~~-l~~ 84 (411)
..+|+.++.+|+ +||||+++++ ++.+++++++|+++++++.++ .|+++.. . .....+ ++.+ +++
T Consensus 21 ~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (413)
T 2z36_A 21 PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG 97 (413)
T ss_dssp TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccc
Confidence 357889999997 8899999997 788999999999999999864 3443321 1 112332 2467 888
Q ss_pred cCChhHHHHHHHHHhhhCCCCchhhhhHH------------------------------HHHHHHHHHHcCCCCChhHHH
Q 039939 85 VSGDLHKKLRNVAVSFIGASKSTPAFLHS------------------------------FTINLMVKHLLSIEPEEPIAF 134 (411)
Q Consensus 85 ~~g~~~~~~R~~~~~~~~~~~l~~~~~~~------------------------------~~~~~~~~~~fG~~~~~~~~~ 134 (411)
.+|+.|+++|+++++.|+.++++. +.. +++++++. +||.+.++ ..
T Consensus 98 ~~g~~h~~~R~~~~~~fs~~~l~~--~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~ 172 (413)
T 2z36_A 98 MDGAEHSAARRPVIGEFTVKRLAA--LRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICE-LLGVPYTD--HD 172 (413)
T ss_dssp CCHHHHHHHHHHHHGGGSHHHHHH--HHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHH-HHTCCGGG--HH
T ss_pred cCchHHHHHHHHHHHhhCHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHH-HhCCCHHH--HH
Confidence 999999999999999998876654 111 56666766 47776543 11
Q ss_pred HHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc----CCCCHHHHHHH
Q 039939 135 KILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK----RSLSEEETVSI 210 (411)
Q Consensus 135 ~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~----~~~~~~~~~~~ 210 (411)
.+ ..+...+.... .. ++..++...+.+++.+++++++++. .+|+++.+++. ..++++ ++..
T Consensus 173 ~~----~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~~~ls~~-ei~~ 237 (413)
T 2z36_A 173 FF----QSRTTMMVSRT----SM--EDRRRAFAELRAYIDDLITRKESEP----GDDLFSRQIARQRQEGTLDHA-GLVS 237 (413)
T ss_dssp HH----HHHHHHTTCSS----CH--HHHHHHHHHHHHHHHHHHHHHHSSC----CSSHHHHHHHHHHHHSCCCHH-HHHH
T ss_pred HH----HHHHHHHhccc----Cc--HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhhcCCCCCCHH-HHHH
Confidence 22 22222222111 11 5566777888899999998887543 56899999864 258888 9999
Q ss_pred HHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-cc
Q 039939 211 VLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FV 288 (411)
Q Consensus 211 ~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~ 288 (411)
++..+++||+|||+ +++|++++|++||++|+++++|+ .||+|||+|+||++|+++ .+
T Consensus 238 ~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~ 296 (413)
T 2z36_A 238 LAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP---------------------GRTPMAVEELLRYFTIADGVT 296 (413)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHHHCTTTTCE
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------------HHHHHHHHHHHHhCCCcccce
Confidence 99999999999999 99999999999999999999984 278999999999999999 78
Q ss_pred ceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHH
Q 039939 289 HREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFF 368 (411)
Q Consensus 289 ~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~ 368 (411)
+|++.+|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|||++||++|++++
T Consensus 297 ~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~ 369 (413)
T 2z36_A 297 SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA-------RHHLAFGFGPHQCLGQNLARMELQIV 369 (413)
T ss_dssp EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC-------CCCCTTCCSTTSCTTHHHHHHHHHHH
T ss_pred eeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC-------CCCCCCCCCCccCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999983 45899999999999999999999999
Q ss_pred HHHHHHhC-eEEecCCC-Cc--cccccccccCCceEEEEe
Q 039939 369 LHHLVLNY-RWKTQADD-YP--IAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 369 l~~ll~~f-~~~~~~~~-~~--~~~~~~~~~~~~~v~~~~ 404 (411)
++.|+++| ++++.++. .. .....+.....++|+++-
T Consensus 370 la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~~ 409 (413)
T 2z36_A 370 FDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWHH 409 (413)
T ss_dssp HHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECCC
T ss_pred HHHHHHhCCCccccCCcccceecccccccCcceeeEEeec
Confidence 99999999 58997652 22 223345666778887653
No 64
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=8.7e-57 Score=421.85 Aligned_cols=339 Identities=20% Similarity=0.211 Sum_probs=266.8
Q ss_pred CCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCccccccC-----Ch--hHHh---hhccccccccC
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQASY-----PK--PMHG---ILGKLSLLTVS 86 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~~~~-----~~--~~~~---~~g~~~l~~~~ 86 (411)
..+|+.++.+| ++||||+++++ ++.++++++||++++++|.++. ++... .. .+.. .++ .++++.+
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 98 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLA-FPLIGVD 98 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------C-CTTTTCC
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccc-cccccCC
Confidence 35788899999 89999999998 7889999999999999998653 22211 11 0111 122 4688899
Q ss_pred ChhHHHHHHHHHhhhCCCCchhh--hhHH-------------------------HHHHHHHHHHcCCCCChhHHHHHHHH
Q 039939 87 GDLHKKLRNVAVSFIGASKSTPA--FLHS-------------------------FTINLMVKHLLSIEPEEPIAFKILED 139 (411)
Q Consensus 87 g~~~~~~R~~~~~~~~~~~l~~~--~~~~-------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~ 139 (411)
|+.|+++|+++++.|+.++++.. .++. +++++++. +||.+.++ ...+...
T Consensus 99 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~ 175 (408)
T 3abb_A 99 DPVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICE-LLGVPYGD--HDFFEEC 175 (408)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHHHHH
T ss_pred chHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH--HHHHHHH
Confidence 99999999999999998766540 0110 56777775 68887643 2223333
Q ss_pred HHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc----CCCCHHHHHHHHHHHH
Q 039939 140 FQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK----RSLSEEETVSIVLDIM 215 (411)
Q Consensus 140 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~----~~~~~~~~~~~~~~~~ 215 (411)
+..+. ..+ .+ ++..++...+.+++.++++++++.. .+|+++.+++. ..++++ ++..++..+
T Consensus 176 ~~~~~----~~~--~~----~~~~~~~~~~~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~ls~~-ei~~~~~~l 240 (408)
T 3abb_A 176 SRNFV----GAA--TS----AEADAAFGELYTYLHGLVGRKQAEP----EDGLLDELIARQLEEGDLDHD-EVVMIALVL 240 (408)
T ss_dssp HHHHC----------------CCSSHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHHTSSSCCHH-HHHHHHHHH
T ss_pred HHHHh----ccc--ch----HHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHhcccCCCCCCHH-HHHHHHHHH
Confidence 22221 111 01 2234456778888888888887654 47899999863 258888 999999999
Q ss_pred HhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeecc
Q 039939 216 LGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIR 294 (411)
Q Consensus 216 ~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~ 294 (411)
++||+|||+ +++|++++|++||++|+++++|++ ||+|||+|+||++|+++.++|++.+
T Consensus 241 ~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~ 299 (408)
T 3abb_A 241 LVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG---------------------AVSGVVEELLRFTSVSDHIVRMAKE 299 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH---------------------HHHHHHHHHHHHHCSSCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------hHHHHHHHHHHhcCcccccceEeCC
Confidence 999999999 999999999999999999998753 6899999999999999988999999
Q ss_pred ccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHH
Q 039939 295 DVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVL 374 (411)
Q Consensus 295 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~ 374 (411)
|++++||.|||||.|+++.+++||||++|+||++|+|||| ...++|||.|+|.|+|++||++|++++++.|++
T Consensus 300 d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~ 372 (408)
T 3abb_A 300 DIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN-------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFA 372 (408)
T ss_dssp CEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC-------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHH
T ss_pred CeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC-------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999996 357899999999999999999999999999999
Q ss_pred hC-eEEecCCC-Ccc--ccccccccCCceEEEEeCC
Q 039939 375 NY-RWKTQADD-YPI--AYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 375 ~f-~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~r~ 406 (411)
+| ++++..+. ... ...++..+.+++|++++|.
T Consensus 373 ~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 373 RIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp HCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred hCccceecCCccccccccCcccCCcceeEEEeCCCC
Confidence 99 79987432 222 2334667889999998774
No 65
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=2.9e-55 Score=405.35 Aligned_cols=330 Identities=19% Similarity=0.221 Sum_probs=265.8
Q ss_pred chhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC--h-hH-----H-hhhc---cccccccCCh
Q 039939 21 TGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP--K-PM-----H-GILG---KLSLLTVSGD 88 (411)
Q Consensus 21 ~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~--~-~~-----~-~~~g---~~~l~~~~g~ 88 (411)
|+..+.+++ +||||+++. | .+++++|++++++|.++. .|+++.. . .+ . .++| ..++++.+|+
T Consensus 1 p~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 74 (367)
T 3b4x_A 1 MYDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP 74 (367)
T ss_dssp CHHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred CCHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhcccccccccCCch
Confidence 345677774 899999997 3 899999999999998763 5555421 1 22 2 3445 3678889999
Q ss_pred hHHHHHHHHHhhhCCCCchhhhh----------------------HHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhh
Q 039939 89 LHKKLRNVAVSFIGASKSTPAFL----------------------HSFTINLMVKHLLSIEPEEPIAFKILEDFQTFMKG 146 (411)
Q Consensus 89 ~~~~~R~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~ 146 (411)
.|+++|+++++.|+.+++....+ ..+++++++. +||.+ ++ ...+......+...
T Consensus 75 ~h~~~R~~~~~~fs~~~l~~~~i~~~~~~l~~~l~g~~d~~~~~~~~~~~~vi~~-~~G~~-~~--~~~~~~~~~~~~~~ 150 (367)
T 3b4x_A 75 LHDELRNLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISK-MLGIN-PD--VKKVKDWSDLVALR 150 (367)
T ss_dssp HHHHHHHTTGGGGSGGGSCHHHHHHHHHHHHHTCCSEEEHHHHTTTHHHHHHHHH-HHTCC-CC--HHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhcCHhhhcchHHHHHHHHHHHhccCCcchHHHHHHhhHHHHHHH-HcCCC-Cc--HHHHHHHHHHHHhc
Confidence 99999999999999887752111 1278899998 79998 53 23344444443332
Q ss_pred hcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccCCCCHHHHHHHHHHHHHhcchHHHH-H
Q 039939 147 FVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKRSLSEEETVSIVLDIMLGGYETTAT-L 225 (411)
Q Consensus 147 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt~-~ 225 (411)
+..+ |.. .+.. ++...+.+++.++++++++++ .+|+++.+++. .++++ ++..++..+++||+|||+ +
T Consensus 151 ~~~~----p~~-~~~~-~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~-~ls~~-el~~~~~~l~~AG~eTt~~~ 218 (367)
T 3b4x_A 151 LGRA----DEI-FSIG-RKYLELISFSKKELDSRKGKE----IVDLTGKIANS-NLSEL-EKEGYFILLMIAGNETTTNL 218 (367)
T ss_dssp TTST----TGG-GCCC-HHHHHHHHHHHHHHHHHTTTC----CSSHHHHHHTS-SSCHH-HHHHHHHHHHHTTTHHHHHH
T ss_pred cCCC----hhh-HHHH-HHHHHHHHHHHHHHHHHhcCC----CCCHHHHHHhc-cCCHH-HHHHHHHHHHHhhhHHHHHH
Confidence 2212 211 1122 566788888999998877543 57999999987 68998 999999999999999999 9
Q ss_pred HHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCC
Q 039939 226 LALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPS 305 (411)
Q Consensus 226 l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~ 305 (411)
++|++++|++ |++|+++++|++ +|+|+|+||++|+++.++|++.+|++++||.|||
T Consensus 219 l~~~l~~L~~-P~~~~~l~~e~~-----------------------~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~ 274 (367)
T 3b4x_A 219 IGNAIEDFTL-YNSWDYVREKGA-----------------------LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDE 274 (367)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHCS-----------------------HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECT
T ss_pred HHHHHHHHhC-HHHHHHHHhCCc-----------------------hHHHHHHHHhcCcccCeeEEeCCCeEECCEEECC
Confidence 9999999999 999999999953 6999999999999999899999999999999999
Q ss_pred CcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEecCCC
Q 039939 306 GWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKTQADD 384 (411)
Q Consensus 306 G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~ 384 (411)
|+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus 275 Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~- 346 (367)
T 3b4x_A 275 GELVRVWIASANRDEEVFKDPDSFIPDRTP-------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK- 346 (367)
T ss_dssp TCEEEECHHHHTTCTTTSSSTTSCCTTCSS-------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE-
T ss_pred CCEEEEChhhhcCCcccCCCccccCCCCCC-------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc-
Confidence 999999999999999999999999999983 4689999999999999999999999999999999 6999765
Q ss_pred CccccccccccCCceEEEEe
Q 039939 385 YPIAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 385 ~~~~~~~~~~~~~~~v~~~~ 404 (411)
.......+..+.+++|++.+
T Consensus 347 ~~~~~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 347 EKIDNEVLNGYRKLVVRVER 366 (367)
T ss_dssp EECCCSSBCSEEEEEEEEEE
T ss_pred cccccccccCcceEEEEecC
Confidence 33334456677789998865
No 66
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=1.9e-55 Score=413.89 Aligned_cols=318 Identities=17% Similarity=0.205 Sum_probs=260.2
Q ss_pred CCCchhHHHHHhhhhccccccccC-CCCeEEecChhhhHHHHhcCCccccccC-----ChhHHhh----hccccccccCC
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHLF-CSPAIVSCDHELNMFILQNEEKYFQASY-----PKPMHGI----LGKLSLLTVSG 87 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~~-~~~~vvv~~pe~~~~vl~~~~~~~~~~~-----~~~~~~~----~g~~~l~~~~g 87 (411)
..+|+.++.+|+++ |||++++++ |.++++|++++++++++.++ .|+... ....... .+..+++..+|
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 104 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA 104 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence 45889999999988 999999986 58999999999999999876 344321 1111111 22367888999
Q ss_pred hhHHHHHHHHHhhhCCCCchhh----------hhHH-----------------HHHHHHHHHHcCCCCChhHHHHHHHHH
Q 039939 88 DLHKKLRNVAVSFIGASKSTPA----------FLHS-----------------FTINLMVKHLLSIEPEEPIAFKILEDF 140 (411)
Q Consensus 88 ~~~~~~R~~~~~~~~~~~l~~~----------~~~~-----------------~~~~~~~~~~fG~~~~~~~~~~~~~~~ 140 (411)
+.|+++|+++++.|+.+++... +++. +++++++.+ ||.+.++. ..+....
T Consensus 105 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~~~~~~~ 181 (417)
T 3tyw_A 105 PEHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDL--EFFRDVT 181 (417)
T ss_dssp HHHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT--THHHHHH
T ss_pred cHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH--HHHHHHH
Confidence 9999999999999998776540 0110 667777776 88877641 1222222
Q ss_pred HHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHH
Q 039939 141 QTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIML 216 (411)
Q Consensus 141 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~ 216 (411)
.. +.... ...++..++...+.+++.++++++++++ ..|+++.+++.. +++.+ ++..++..++
T Consensus 182 ~~----~~~~~-----~~~~~~~~~~~~l~~~~~~~i~~r~~~~----~~d~l~~ll~~~~~~~~ls~~-el~~~~~~l~ 247 (417)
T 3tyw_A 182 RI----SGSRN-----STAEQVSEALGGLFGLLGGLVAERREEP----RDDLISKLVTDHLVPGNVTTE-QLLSTLGITI 247 (417)
T ss_dssp HH----HHSSS-----SCTTHHHHHHHHHHHHHHHHHHHHHSSC----CSSHHHHHHHHTTTTTSSCHH-HHHHHHHHHH
T ss_pred HH----Hhccc-----CCHHHHHHHHHHHHHHHHHHHHHHhhCC----CCCHHHHHHHhcccCCCCCHH-HHHHHHHHHH
Confidence 22 21111 1234567778888999999999887654 579999999753 58888 9999999999
Q ss_pred hcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcc-cceeecc
Q 039939 217 GGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIR 294 (411)
Q Consensus 217 ~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~ 294 (411)
+||+|||+ +++|++++|++||++|+++++|++ ||+|+|+|+||++|+++. ++|++.+
T Consensus 248 ~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~ 306 (417)
T 3tyw_A 248 NAGRETTTSMIALSTLLLLDRPELPAELRKDPD---------------------LMPAAVDELLRVLSVADSIPLRVAAE 306 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG---------------------GHHHHHHHHHHHHCSCTTCCEEEESS
T ss_pred hhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH---------------------HHHHHHHHHHHhccccccCceeEeCC
Confidence 99999999 999999999999999999999843 689999999999999997 7899999
Q ss_pred ccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHH
Q 039939 295 DVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVL 374 (411)
Q Consensus 295 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~ 374 (411)
|++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|||++||++|++++++.|++
T Consensus 307 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~ 379 (417)
T 3tyw_A 307 DIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD-------NHHVAFGYGVHQCVGQHLARLELEVALETLLR 379 (417)
T ss_dssp CEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC-------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred CeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC-------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999982 56999999999999999999999999999999
Q ss_pred hC-eEEecCC
Q 039939 375 NY-RWKTQAD 383 (411)
Q Consensus 375 ~f-~~~~~~~ 383 (411)
+| +++++.+
T Consensus 380 ~fp~~~l~~~ 389 (417)
T 3tyw_A 380 RVPTLRLAGE 389 (417)
T ss_dssp HCTTCEECSC
T ss_pred hCCcccccCC
Confidence 99 9999744
No 67
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=6.5e-55 Score=407.32 Aligned_cols=332 Identities=15% Similarity=0.164 Sum_probs=259.2
Q ss_pred CCCchhHHHHHhhhhcccccccc-CCCCeEEecChhhhHHHHhcCCcccc-c-cCC---hhH-----HhhhccccccccC
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHL-FCSPAIVSCDHELNMFILQNEEKYFQ-A-SYP---KPM-----HGILGKLSLLTVS 86 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~-~~~~~vvv~~pe~~~~vl~~~~~~~~-~-~~~---~~~-----~~~~g~~~l~~~~ 86 (411)
..+|+.++.+| ++||||+++++ ++.+.+++++++++++++.++. |+ + +.. ..+ ...++ .++++.
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVV-NNMGNI- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGG-GHHHHH-
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhh-hhhhhH-
Confidence 35788999999 99999999998 7889999999999999998653 43 2 211 111 11122 455555
Q ss_pred ChhHHHHHHHHHhhhCCCCchhh----------hh----H-------------HHHHHHHHHHHcCCCCChhHHHHHHHH
Q 039939 87 GDLHKKLRNVAVSFIGASKSTPA----------FL----H-------------SFTINLMVKHLLSIEPEEPIAFKILED 139 (411)
Q Consensus 87 g~~~~~~R~~~~~~~~~~~l~~~----------~~----~-------------~~~~~~~~~~~fG~~~~~~~~~~~~~~ 139 (411)
.|+++|+++++.|+.+ ++.. ++ + .+++++++. +||.+.++ ...+.+.
T Consensus 90 --~h~~~R~~~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~ 163 (396)
T 1n40_A 90 --ADAGLRKAVMKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCK-VLGIPQED--GPKLFRS 163 (396)
T ss_dssp --HHTTCHHHHHHHTSSC-STTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHH-HHTCCGGG--HHHHHHT
T ss_pred --HHHHHHHHHHHhhChH-HHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHH-HhCCChhh--HHHHHHH
Confidence 9999999999999988 7651 01 1 067788887 78987653 2233333
Q ss_pred HHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc------CCCCHHHHHHHHHH
Q 039939 140 FQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK------RSLSEEETVSIVLD 213 (411)
Q Consensus 140 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~------~~~~~~~~~~~~~~ 213 (411)
+..+..... ..| .++..++...+ +++.++++ +. ....|+++.+++. ..++++ ++..++.
T Consensus 164 ~~~~~~~~~----~~p---~~~~~~~~~~~-~~~~~~i~----~~--~~~~dll~~ll~~~~~~~~~~l~~~-~i~~~~~ 228 (396)
T 1n40_A 164 LSIAFMSSA----DPI---PAAKINWDRDI-EYMAGILE----NP--NITTGLMGELSRLRKDPAYSHVSDE-LFATIGV 228 (396)
T ss_dssp HHHHTBCCS----SCC---HHHHHHHHHHH-HHHHHHHH----CT--TCCSHHHHHHHHHHTSGGGTTSCHH-HHHHHHH
T ss_pred HHHHhcccc----CCC---HHHHHHHHHHH-HHHHHHHh----CC--CCCCCHHHHHHHhhcccccCCCCHH-HHHHHHH
Confidence 333322111 112 24555666667 77777776 22 2347899999852 248888 9999999
Q ss_pred HHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-cccee
Q 039939 214 IMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FVHRE 291 (411)
Q Consensus 214 ~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~ 291 (411)
.+++||+|||+ +++|++++|++||++|+++++|+ .||+|+|+|+||++|+++ .++|.
T Consensus 229 ~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~~l~a~i~E~lRl~p~~~~~~~R~ 287 (396)
T 1n40_A 229 TFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP---------------------ELIPAGVEELLRINLSFADGLPRL 287 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------GGHHHHHHHHHHTCCCBCSCEEEE
T ss_pred HHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH---------------------HHHHHHHHHHHhhCCCccccccee
Confidence 99999999999 99999999999999999999984 379999999999999999 78999
Q ss_pred eccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHH
Q 039939 292 AIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHH 371 (411)
Q Consensus 292 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ 371 (411)
+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++ ..++|||.|+|.|+|++||++|++++++.
T Consensus 288 ~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ 361 (396)
T 1n40_A 288 ATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP------TSHLAFGRGQHFCPGSALGRRHAQIGIEA 361 (396)
T ss_dssp ESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST------TCSSTTCCGGGCCTTHHHHHHHHHHHHHH
T ss_pred cCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC------CCCCCCCCCCcCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999963 46899999999999999999999999999
Q ss_pred HHHhC-eEEecCCC-Ccc--ccccccccCCceEEE
Q 039939 372 LVLNY-RWKTQADD-YPI--AYPYVEFRRGLLLEI 402 (411)
Q Consensus 372 ll~~f-~~~~~~~~-~~~--~~~~~~~~~~~~v~~ 402 (411)
|+++| ++++.++. ... ...++..+.+++|++
T Consensus 362 ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~ 396 (396)
T 1n40_A 362 LLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 396 (396)
T ss_dssp HHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred HHHhCccccccCCccccccccccccCCcceeeeeC
Confidence 99999 49997642 222 233456777888763
No 68
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=6.9e-55 Score=406.68 Aligned_cols=340 Identities=16% Similarity=0.159 Sum_probs=266.2
Q ss_pred CchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHh-hhccccccccCChhHHHHHHHH
Q 039939 20 STGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHG-ILGKLSLLTVSGDLHKKLRNVA 97 (411)
Q Consensus 20 ~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~-~~g~~~l~~~~g~~~~~~R~~~ 97 (411)
+|+.++.++++ +|||+++..+ .++|++++.+++++.++ .|+..... .... ..+..+++..||+.|+++|+++
T Consensus 21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~ 94 (394)
T 2wiy_A 21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQT 94 (394)
T ss_dssp CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHHH
T ss_pred CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHHHHHHHH
Confidence 68889988865 5899988642 78999999999999754 34322100 0111 1223578889999999999999
Q ss_pred HhhhCCCCchhh--hhHH-----------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcccCc
Q 039939 98 VSFIGASKSTPA--FLHS-----------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVSLPV 152 (411)
Q Consensus 98 ~~~~~~~~l~~~--~~~~-----------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p~ 152 (411)
++.|+++++... .+++ ++.++++..+||.+.++ ...+.+.+........
T Consensus 95 ~~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--~~~~~~~~~~~~~~~~---- 168 (394)
T 2wiy_A 95 NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDD--ADAVMEAMFEAMLMQS---- 168 (394)
T ss_dssp HTTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCC--HHHHHHHHHHHHGGGS----
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhH--HHHHHHHHHHHHHhcc----
Confidence 999998776650 0111 77788888999987653 2333333322211111
Q ss_pred cCCC-cccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc---CCCCHHHHHHHHHHHHHhcchHHHH-HHH
Q 039939 153 YIPG-THYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK---RSLSEEETVSIVLDIMLGGYETTAT-LLA 227 (411)
Q Consensus 153 ~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~---~~~~~~~~~~~~~~~~~~ag~~tt~-~l~ 227 (411)
..|. ....+..++...+.+++.++++++++++ .+|+++.|++. ..++++ ++..++..+++||+|||+ +++
T Consensus 169 ~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~----~~dll~~Ll~~~~~~~ls~~-el~~~~~~l~~AG~eTTa~~l~ 243 (394)
T 2wiy_A 169 AEPADGDVDRAAVAFGYLSARVAEMLEDKRVNP----GDGLADSLLDAARAGEITES-EAIATILVFYAVGHMAIGYLIA 243 (394)
T ss_dssp SSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHHTTSSCHH-HHHHHHHHHHHHTTTHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHhhcCC----CCcHHHHHHHhhhcCCCCHH-HHHHHHHHHHHhhhhhHHHHHH
Confidence 1121 2234455667788888999998887554 46899988853 358888 999999999999999999 999
Q ss_pred HHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEeCCCc
Q 039939 228 LIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLIPSGW 307 (411)
Q Consensus 228 ~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~ 307 (411)
|++++|++||++|+++++|+ +|++++|+|+||++||++.++|++++|++++||.||||+
T Consensus 244 ~~l~~L~~~P~~~~~l~~e~---------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~ 302 (394)
T 2wiy_A 244 SGIELFARRPEVFTAFRNDE---------------------SARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGS 302 (394)
T ss_dssp HHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETTEEECTTC
T ss_pred HHHHHHHHCHHHHHHHHhCh---------------------HhHHHHHHHHHhhCCCccCeeEEECCCEEEcCeecCCCC
Confidence 99999999999999999874 368999999999999999989999999999999999999
Q ss_pred EEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCe-EEecCCCCc
Q 039939 308 KVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYR-WKTQADDYP 386 (411)
Q Consensus 308 ~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~ 386 (411)
.|+++.+++||||++|+||++|+||||++ ...++|||+|+|.|+|++||++|++++++.|+++|+ +++.++...
T Consensus 303 ~V~~~~~~~~rdp~~~~dP~~F~p~R~~~-----~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~ 377 (394)
T 2wiy_A 303 PIRFMIGAANRDPEVFDDPDVFDHTRPPA-----ASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEEPTV 377 (394)
T ss_dssp CEEEEHHHHTTCTTTSSSTTSCCTTCCGG-----GSCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSCCEE
T ss_pred EEEeChHhhcCCcccCCCccccCCCCCCC-----CCCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCCCcc
Confidence 99999999999999999999999999973 246999999999999999999999999999999998 999865443
Q ss_pred cccccccccCCceEEE
Q 039939 387 IAYPYVEFRRGLLLEI 402 (411)
Q Consensus 387 ~~~~~~~~~~~~~v~~ 402 (411)
.....+.....++|++
T Consensus 378 ~~~~~~~g~~~lpv~~ 393 (394)
T 2wiy_A 378 AHNDFARRYRKLPIVL 393 (394)
T ss_dssp CCCSSBCCEEECEEEE
T ss_pred cccccccCcceeeEEe
Confidence 3344556667777775
No 69
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=2.3e-55 Score=410.87 Aligned_cols=332 Identities=13% Similarity=0.122 Sum_probs=256.0
Q ss_pred hhHHHHHhhhhccccccccC-CC---CeEEecChhhhHHHH-hcCCccccccCC-------h---hHHhhhccccccccC
Q 039939 22 GSFLQQHCSIYGQVFKSHLF-CS---PAIVSCDHELNMFIL-QNEEKYFQASYP-------K---PMHGILGKLSLLTVS 86 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~-~~---~~vvv~~pe~~~~vl-~~~~~~~~~~~~-------~---~~~~~~g~~~l~~~~ 86 (411)
+.++..|+++ |||+++.++ |. ++++|++|+++++++ .++ .|+.+.. . ......+..++++.+
T Consensus 16 ~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 92 (398)
T 1lfk_A 16 LDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ--QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYD 92 (398)
T ss_dssp TEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT--TEEECTTCCC-------------CCTTCGGGCC
T ss_pred CChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc--ccccccccccccccCCcccccccccccCccccC
Confidence 3455667766 999999875 55 899999999999999 543 3444322 1 111222235788889
Q ss_pred ChhHHHHHHHHHhhhCCCCchhh----------hhHH-----------------HHHHHHHHHHcCCCCChhHHHHHHHH
Q 039939 87 GDLHKKLRNVAVSFIGASKSTPA----------FLHS-----------------FTINLMVKHLLSIEPEEPIAFKILED 139 (411)
Q Consensus 87 g~~~~~~R~~~~~~~~~~~l~~~----------~~~~-----------------~~~~~~~~~~fG~~~~~~~~~~~~~~ 139 (411)
|+.|+++|+++++.|+.++++.. +++. ++.++++. +||.+.++ ...+.+.
T Consensus 93 g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~ 169 (398)
T 1lfk_A 93 PPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCE-LVGVPRDD--RDMFMKL 169 (398)
T ss_dssp TTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHHH
T ss_pred CHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHH
Confidence 99999999999999998776540 1100 56666665 58887653 2223332
Q ss_pred HHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc--CCCCHHHHHHHHHHHHHh
Q 039939 140 FQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK--RSLSEEETVSIVLDIMLG 217 (411)
Q Consensus 140 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~--~~~~~~~~~~~~~~~~~~ 217 (411)
+.. +...+ ...++..++...+.+++.+.++++++.. ..|+++.+++. ..++++ ++..++..+++
T Consensus 170 ~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~----~~dll~~ll~~~~~~l~~~-el~~~~~~l~~ 235 (398)
T 1lfk_A 170 CHG----HLDAS-----LSQKRRAALGDKFSRYLLAMIARERKEP----GEGMIGAVVAEYGDDATDE-ELRGFCVQVML 235 (398)
T ss_dssp HHH----TTCTT-----SCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHGGGSCHH-HHHHHHHHHHH
T ss_pred HHH----HHhcc-----cchHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhcCCCCCHH-HHHHHHHHHHH
Confidence 222 22211 1235667778888999999999887653 56999999863 358888 99999999999
Q ss_pred cchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCc-ccceeeccc
Q 039939 218 GYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVK-FVHREAIRD 295 (411)
Q Consensus 218 ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d 295 (411)
||+|||+ +++|++++|++||++|+++++|++ ||+|||+|+||++|+++ .++|.+.+|
T Consensus 236 AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d 294 (398)
T 1lfk_A 236 AGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ---------------------SAQRAVDELIRYLTVPYSPTPRIARED 294 (398)
T ss_dssp HTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH---------------------HHHHHHHHHHHHHCCBSCCSCEEESSC
T ss_pred HhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHHhCcccccccceecCCC
Confidence 9999999 999999999999999999998864 68999999999999999 689999999
Q ss_pred cccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHh
Q 039939 296 VKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLN 375 (411)
Q Consensus 296 ~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~ 375 (411)
++++||.||||+.|+++.+++||||++|+||++|+||||. ..++|||+|+|.|||++||++|++++++.|+++
T Consensus 295 ~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~ 367 (398)
T 1lfk_A 295 LTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP-------IPHVAFGHGVHHCLGAALARLELRTVFTELWRR 367 (398)
T ss_dssp EEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC-------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred eeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC-------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999983 468999999999999999999999999999999
Q ss_pred C-eEEecCCCC-cc--ccccccccCCceEE
Q 039939 376 Y-RWKTQADDY-PI--AYPYVEFRRGLLLE 401 (411)
Q Consensus 376 f-~~~~~~~~~-~~--~~~~~~~~~~~~v~ 401 (411)
| ++++.++.. .. ..........++|+
T Consensus 368 f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~ 397 (398)
T 1lfk_A 368 FPALRLADPAQDTEFRLTTPAYGLTELMVA 397 (398)
T ss_dssp CTTCEESSTTCCCEEECSSSBCEEEECEEE
T ss_pred CCCCEeCCCCCccccccCcCcCCcccceee
Confidence 9 799974322 21 22334455556654
No 70
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=1.2e-55 Score=422.94 Aligned_cols=357 Identities=17% Similarity=0.239 Sum_probs=254.2
Q ss_pred CCCcccchhhhhcccCCCC-CchhHHHHHhhhhcc-ccccccCCCCe-------EEecChhhhHHHHhc----CCccccc
Q 039939 1 MGWPICGETLAFLKPHKSN-STGSFLQQHCSIYGQ-VFKSHLFCSPA-------IVSCDHELNMFILQN----EEKYFQA 67 (411)
Q Consensus 1 ~~~P~lG~~~~~~~~~~~~-~~~~~l~~~~~~yG~-v~~~~~~~~~~-------vvv~~pe~~~~vl~~----~~~~~~~ 67 (411)
+|||+|||++++....... +++.++.+++++||+ ||++++++.++ +++.+.+..+.++.. +...+..
T Consensus 15 ~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (473)
T 3dan_A 15 YGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTG 94 (473)
T ss_dssp CCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTS
T ss_pred CCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcceeccccccc
Confidence 3689999999986432334 788999999999999 99999875443 344444444444431 1122333
Q ss_pred cCChhHHhhhc---cccccccCChhHHHHHHHHHhhhCCCCchh--------------hhhH---------------HHH
Q 039939 68 SYPKPMHGILG---KLSLLTVSGDLHKKLRNVAVSFIGASKSTP--------------AFLH---------------SFT 115 (411)
Q Consensus 68 ~~~~~~~~~~g---~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~--------------~~~~---------------~~~ 115 (411)
.++... ..+| ..+++..+|+.|+++|+++++.|+.+ +.. .+.. .++
T Consensus 95 ~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~vdl~~~~~~~~ 172 (473)
T 3dan_A 95 TYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAA 172 (473)
T ss_dssp SSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHH
T ss_pred cccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHH
Confidence 333323 3444 24567789999999999999999883 433 0100 088
Q ss_pred HHHHHHHHcCCCCChhHHHHHHHHHHHHHh---hhcccCc---cCCCcccHHH------------HHHHHHHHHHHHHHH
Q 039939 116 INLMVKHLLSIEPEEPIAFKILEDFQTFMK---GFVSLPV---YIPGTHYANA------------VKARARLSRTVREIV 177 (411)
Q Consensus 116 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~---~~~~~p~---~~p~~~~~~~------------~~~~~~~~~~~~~~i 177 (411)
+++++.++||.+.+... +.+.+..+.. .+..+|. .+|. ..... .+..+.+.+.+.
T Consensus 173 ~~~i~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 245 (473)
T 3dan_A 173 FRFLGRAYFNSNPEETK---LGTSAPTLISSWVLFNLAPTLDLGLPW-FLQEPLLHTFRLPAFLIKSTYNKLYDYFQ--- 245 (473)
T ss_dssp HHHHHHHHHSCCGGGST---TTTCHHHHHHHHHHHHHGGGCCCSCCH-HHHHHHHSSSCCCGGGTHHHHHHHHHHHH---
T ss_pred HHHHHHHHcCCCCCchh---hhhhHHHHHHHHHHHhccchhhhcchH-HHHHHHhhhccchHhhhhhchhhhHHHHH---
Confidence 99999999998765411 1111111111 1112232 2221 00000 111111111111
Q ss_pred HHHHhhcccCCCCchHHHHHcc---CCCCHHHHHHHHHHHHH-hcchHHHH-HHHHHHHHHhh-ChHHHHHHHHHHHHHh
Q 039939 178 RERQHENMRAGEGDFLDVILKK---RSLSEEETVSIVLDIML-GGYETTAT-LLALIVYFLAH-APAVFQKLKEEHRAIR 251 (411)
Q Consensus 178 ~~~~~~~~~~~~~d~l~~ll~~---~~~~~~~~~~~~~~~~~-~ag~~tt~-~l~~~l~~L~~-~p~~~~~l~~Ei~~~~ 251 (411)
++++.+++. .+++++ ++..+++.+. ++|++||+ +++|++++|++ ||++|++|++|++.++
T Consensus 246 -------------~~~~~ll~~~~~~~l~~~-ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~ 311 (473)
T 3dan_A 246 -------------SVATPVMEQAEKLGVPKD-EAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAI 311 (473)
T ss_dssp -------------HHCHHHHHHHHHHTCCHH-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHhHhhcCCCHH-HHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 223333322 258888 8887776666 78889899 99999999999 8999999999999998
Q ss_pred ccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeecccccc----CCEEeCCCcEEecchhhhccCCCCCCCCC
Q 039939 252 KSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKF----KEYLIPSGWKVLPVFTAAHFDLNLHENPS 327 (411)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~ 327 (411)
+.+ .+..++.+++++||||+|||+|+||++|+++...|++.+|+++ +||.||||+.|+++.+++||||++|+||+
T Consensus 312 ~~~-~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~ 390 (473)
T 3dan_A 312 KSY-GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPE 390 (473)
T ss_dssp HHH-STTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTT
T ss_pred hcc-cCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcc
Confidence 751 1357899999999999999999999999999987889999999 99999999999999999999999999999
Q ss_pred CCCCCCCCCCccCCCCceeeccCCC---------CCCccHHHHHHHHHHHHHHHHHhCeEEecC
Q 039939 328 EFNPSRWTDKASVISKRVMPFGGGP---------RLCPGAELAKVEISFFLHHLVLNYRWKTQA 382 (411)
Q Consensus 328 ~F~P~Rfl~~~~~~~~~~~~FG~G~---------r~C~G~~la~~~~~~~l~~ll~~f~~~~~~ 382 (411)
+|+||||++.. .....+++||.|+ |.|||++||++|++++++.|+++|++...+
T Consensus 391 ~F~p~R~~~~~-~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 453 (473)
T 3dan_A 391 EYVPDRFVGDG-EALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIE 453 (473)
T ss_dssp SCCTTTTSGGG-GGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cCCccccCCCc-ccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEcc
Confidence 99999999863 2334455555555 999999999999999999999999976544
No 71
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=2.2e-54 Score=402.76 Aligned_cols=332 Identities=16% Similarity=0.151 Sum_probs=265.0
Q ss_pred CCchhHHHHHhhhhccccccccCC----CCeEEecChhhhHHHHhcCCccccccCChh-H-HhhhccccccccCChhHHH
Q 039939 19 NSTGSFLQQHCSIYGQVFKSHLFC----SPAIVSCDHELNMFILQNEEKYFQASYPKP-M-HGILGKLSLLTVSGDLHKK 92 (411)
Q Consensus 19 ~~~~~~l~~~~~~yG~v~~~~~~~----~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~-~-~~~~g~~~l~~~~g~~~~~ 92 (411)
.+|+.++.++ ++||||+++++++ .++++++||+++++++++. ..|+++.... . ....+..+++..+|+.|++
T Consensus 12 ~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 89 (384)
T 3oo3_A 12 LDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPPDHTR 89 (384)
T ss_dssp TEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTTHHHH
T ss_pred cChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCChhHHH
Confidence 5788999999 5999999999876 8999999999999999654 4565543221 1 1122235678889999999
Q ss_pred HHHHHHhhhCCCCchhh----------hhHH----------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhh
Q 039939 93 LRNVAVSFIGASKSTPA----------FLHS----------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKG 146 (411)
Q Consensus 93 ~R~~~~~~~~~~~l~~~----------~~~~----------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~ 146 (411)
+|+++++.|+.+++... +++. .+...+...+||.+.++ ...+.+.+..+..
T Consensus 90 ~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~--~~~~~~~~~~~~~- 166 (384)
T 3oo3_A 90 LRRTVAPAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDD--QAELSRMIRESRE- 166 (384)
T ss_dssp HHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGG--HHHHHHHHHHHHH-
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHH--HHHHHHHHHHHhc-
Confidence 99999999998876651 1110 44555556678887653 2333333333322
Q ss_pred hcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHcc--CCCCHHHHHHHHHHHHHhcchHHHH
Q 039939 147 FVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKK--RSLSEEETVSIVLDIMLGGYETTAT 224 (411)
Q Consensus 147 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~--~~~~~~~~~~~~~~~~~~ag~~tt~ 224 (411)
....++..++...+.+++.+++++++++. ..|+++.+++. ..++++ ++..++..+++||+|||+
T Consensus 167 ---------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~d~l~~ll~~~~~~l~~~-~l~~~~~~~~~AG~~Tta 232 (384)
T 3oo3_A 167 ---------SRLPRQRTLSGLGIVNYTKRLTSGKRRDP----GDGMIGVIVREHGAEISDE-ELAGLAEGNLIMAAEQMA 232 (384)
T ss_dssp ---------CSCHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHGGGSCHH-HHHHHHHHHHHHHHHHHH
T ss_pred ---------cCChHHHHHHHHHHHHHHHHHHHHHHhCC----CCCHHHHHHHhcCCCCCHH-HHHHHHHHHHHhhHHHHH
Confidence 12345667788889999999998877544 57999999964 358888 999999999999999999
Q ss_pred -HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcc-cceeeccccccCCEE
Q 039939 225 -LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKF-VHREAIRDVKFKEYL 302 (411)
Q Consensus 225 -~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ 302 (411)
+++|++++|++||++|+++++|++. |+|||+|+||++|+++. ++|.+.+|++++||.
T Consensus 233 ~~l~~~l~~L~~~P~~~~~l~~E~~~---------------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ 291 (384)
T 3oo3_A 233 AQLAVAVLLLVTHPDQMALLREKPEL---------------------IDSATEEVLRHASIVEAPAPRVALADVRMAGRD 291 (384)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHCGGG---------------------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEE
T ss_pred HHHHHHHHHHHHCHHHHHHHHhCHHH---------------------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEE
Confidence 9999999999999999999999753 78999999999999985 889999999999999
Q ss_pred eCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEec
Q 039939 303 IPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKTQ 381 (411)
Q Consensus 303 ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~ 381 (411)
||||+.|+++.+++|| +||++|+|||| ...++|||.|+|.|||++||++|++++++.|+++| ++++.
T Consensus 292 Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~-------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~ 359 (384)
T 3oo3_A 292 IHAGDVLTCSMLATNR-----APGDRFDITRE-------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLA 359 (384)
T ss_dssp ECTTCEEEECHHHHHC-----CTTCCCCTTCS-------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred ECCCCEEEEehhhcCC-----CCcceeCCCCC-------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeC
Confidence 9999999999999999 99999999995 56799999999999999999999999999999999 99998
Q ss_pred CCCC-ccc---cccccccCCceEEE
Q 039939 382 ADDY-PIA---YPYVEFRRGLLLEI 402 (411)
Q Consensus 382 ~~~~-~~~---~~~~~~~~~~~v~~ 402 (411)
+++. ... ..++..+..++|++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~lpv~~ 384 (384)
T 3oo3_A 360 VPEEDLRFKPGRPAPFAVEELPLEW 384 (384)
T ss_dssp SCGGGCCEECSSSSCCEESCCEEEC
T ss_pred CCCccceeecccccccCcceeeeeC
Confidence 6543 222 34556677777763
No 72
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=1e-54 Score=408.50 Aligned_cols=343 Identities=17% Similarity=0.153 Sum_probs=269.1
Q ss_pred CCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccC--------ChhHHhhhccccccccCChh
Q 039939 18 SNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY--------PKPMHGILGKLSLLTVSGDL 89 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~--------~~~~~~~~g~~~l~~~~g~~ 89 (411)
..+|+.+ .. .++||||+++.++... ++|+++++++++|.++...+.... .......++ .+++..||+.
T Consensus 32 ~~~P~~~-~~-lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~dg~~ 107 (416)
T 3p3o_A 32 PNFSWDS-PE-VAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMV-DFLQSLDGAD 107 (416)
T ss_dssp TTCCTTS-HH-HHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHH-HSGGGCCHHH
T ss_pred ccCCchH-HH-HHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhc-CccccCCchH
Confidence 3578888 54 4589999999886656 999999999999987642222110 111122223 5788999999
Q ss_pred HHHHHHHHHhhhCCCCchhhhhHH---------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHH
Q 039939 90 HKKLRNVAVSFIGASKSTPAFLHS---------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQT 142 (411)
Q Consensus 90 ~~~~R~~~~~~~~~~~l~~~~~~~---------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 142 (411)
|+++|+++++.|+.++++. +.. +++++++. +||.+.++ ...+.+....
T Consensus 108 h~~~Rr~~~~~fs~~~l~~--~~~~i~~~~~~ll~~l~~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~~~~ 182 (416)
T 3p3o_A 108 HRRLRGLATHPFTPRRITA--VQPFVRSTVEQLIDKLPQGDFDFVQHFPHPLPALVMCQ-LLGFPLED--YDTVGRLSIE 182 (416)
T ss_dssp HHHHHHTTCGGGSHHHHHH--HHHHHHHHHHHHHHTCCSSSEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHHHHHHHT
T ss_pred HHHHHHHHHHhhCHHHHHH--HHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHH-HhCCCHHH--HHHHHHHHHH
Confidence 9999999999999887665 111 77777776 57876543 2222222222
Q ss_pred HHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC---CCCHHHHHHHHHHHHHhcc
Q 039939 143 FMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR---SLSEEETVSIVLDIMLGGY 219 (411)
Q Consensus 143 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~~~~~~~~~~~ag 219 (411)
+.. .+....+....++..++...+.+++.+++++++++. .+|+++.|++.. .++++ ++..++..+++||
T Consensus 183 ~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~----~~dll~~ll~~~~~~~ls~~-el~~~~~~l~~AG 254 (416)
T 3p3o_A 183 TNL---GLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEP----GDDLTSDIVRAFHDGVLDDY-ELRTLVATVLVAG 254 (416)
T ss_dssp TCG---GGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC----CSSHHHHHHHHHHTTSSCHH-HHHHHHHHHHHHH
T ss_pred HHh---hcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCC----CccHHHHHHHhhccCCCCHH-HHHHHHHHHHHhh
Confidence 211 111111222345667788889999999999887654 679999998642 68888 9999999999999
Q ss_pred hHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCC-cccceeeccccc
Q 039939 220 ETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVV-KFVHREAIRDVK 297 (411)
Q Consensus 220 ~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~-~~~~R~~~~d~~ 297 (411)
+|||+ +++|++++|++||++|+++++|++ |++++|+|+||++|++ ..++|++.+|++
T Consensus 255 ~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~ 313 (416)
T 3p3o_A 255 YETTNHQLALAMYDFAQHPDQWMKIKENPE---------------------LAPQAVEEVLRWSPTLPVTATRVAAEDFE 313 (416)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------GHHHHHHHHHHHSCSCSSCCEEEESSCEE
T ss_pred ccHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------HHHHHHHHHHhhccccccCcceEeCCCeE
Confidence 99999 999999999999999999999853 7899999999999999 568899999999
Q ss_pred cCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCe
Q 039939 298 FKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYR 377 (411)
Q Consensus 298 l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~ 377 (411)
++||.||||+.|+++.+++||||++|+||++|+|+||. ...++|||.|+|.|+|++||++|++++++.|+++|+
T Consensus 314 l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~ 387 (416)
T 3p3o_A 314 VNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKR------EAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387 (416)
T ss_dssp ETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCC------SSCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSC
T ss_pred ECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCC------CCCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999973 346999999999999999999999999999999995
Q ss_pred -EEecCCCCccccccccccCCceEEEEe
Q 039939 378 -WKTQADDYPIAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 378 -~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (411)
+++.++........+..+..++|++.|
T Consensus 388 ~~~l~~~~~~~~~~~~~g~~~lpv~~~p 415 (416)
T 3p3o_A 388 PPQIAGEITWRHELGVAGPDALPLRFGA 415 (416)
T ss_dssp CEEECSCCEECCCTTCCCEEECEEEESC
T ss_pred ccccCCCCceecCCCccCcceeeEEEec
Confidence 888766543334456667778888754
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=2.4e-54 Score=399.76 Aligned_cols=329 Identities=19% Similarity=0.236 Sum_probs=257.6
Q ss_pred chhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCC--h-hHH----hh--hc--c-ccccccCCh
Q 039939 21 TGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYP--K-PMH----GI--LG--K-LSLLTVSGD 88 (411)
Q Consensus 21 ~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~--~-~~~----~~--~g--~-~~l~~~~g~ 88 (411)
|+.++.++ ++||||+++ | +.+++++++++++++.++ ..|+++.. . .+. .. ++ . .++++.+|+
T Consensus 1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 74 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP 74 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCCh
Confidence 35677888 499999987 4 589999999999999875 35665543 1 111 11 22 2 578889999
Q ss_pred hHHHHHHHHHhhhCCCCchhh----------hh---------------HHHHHHHHHHHHcCCCCChhHHHHHHHHHHHH
Q 039939 89 LHKKLRNVAVSFIGASKSTPA----------FL---------------HSFTINLMVKHLLSIEPEEPIAFKILEDFQTF 143 (411)
Q Consensus 89 ~~~~~R~~~~~~~~~~~l~~~----------~~---------------~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~ 143 (411)
.|+++|+++++.|+.++++.. ++ ..+++++++.+ ||.+.++ ... +..+
T Consensus 75 ~h~~~R~~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~~----~~~~ 147 (368)
T 1io7_A 75 LHDELRSMSADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKI-LGLPIED--KEK----FKEW 147 (368)
T ss_dssp HHHHHHGGGTTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHH----HHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHH-hCCCHHH--HHH----HHHH
Confidence 999999999999988665440 00 11778888888 8987653 122 2233
Q ss_pred HhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccCCCCHHHHHHHHHHHHHhcchHHH
Q 039939 144 MKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKRSLSEEETVSIVLDIMLGGYETTA 223 (411)
Q Consensus 144 ~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~ag~~tt 223 (411)
...+.... ..|. ..++..++.+.+.+++.+.+ + ...|+++.+++. .++++ ++..++..+++||+|||
T Consensus 148 ~~~~~~~~-~~p~-~~~~~~~~~~~~~~~~~~~i-----~----~~~d~l~~ll~~-~l~~~-ei~~~~~~l~~AG~dTt 214 (368)
T 1io7_A 148 SDLVAFRL-GKPG-EIFELGKKYLELIGYVKDHL-----N----SGTEVVSRVVNS-NLSDI-EKLGYIILLLIAGNETT 214 (368)
T ss_dssp GGGCTTSC-CCTT-CHHHHHHHHHHHHHHHHHHT-----T----SSCHHHHHHHTS-SCCHH-HHHHHHHHHHHTTHHHH
T ss_pred HHHHHhcc-CChH-HHHHHHHHHHHHHHHHHHHh-----C----CCCCHHHHHHhc-cCCHH-HHHHHHHHHHHhhhHHH
Confidence 22222211 0122 22445556666666666666 1 256899999976 68988 99999999999999999
Q ss_pred H-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEE
Q 039939 224 T-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYL 302 (411)
Q Consensus 224 ~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ 302 (411)
+ +++|++++|++|| +|+++++| + |++|+|+|+||++|+++.++|.+.+|++++||.
T Consensus 215 ~~~l~~~l~~L~~~P-~~~~l~~E-~---------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ 271 (368)
T 1io7_A 215 TNLISNSVIDFTRFN-LWQRIREE-N---------------------LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQT 271 (368)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHH-T---------------------CHHHHHHHHHHHSCSBCCEEEEESSCEEETTEE
T ss_pred HHHHHHHHHHHHhCh-HHHHHHhc-c---------------------hHHHHHHHHHHhCcccccCceeeCCCeeECCEE
Confidence 9 9999999999999 99999998 2 588999999999999998899999999999999
Q ss_pred eCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCe-EEec
Q 039939 303 IPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYR-WKTQ 381 (411)
Q Consensus 303 ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~ 381 (411)
||||+.|+++.+++||||++|+||++|+|||+ +..++|||.|+|.|+|++||++|++++++.|+++|+ +++.
T Consensus 272 Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~-------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 344 (368)
T 1io7_A 272 IEEGEYVRVWIASANRDEEVFHDGEKFIPDRN-------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEIL 344 (368)
T ss_dssp ECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC-------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ECCCCEEEecHhhhCCChhhCCCcceeCCCCC-------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEec
Confidence 99999999999999999999999999999993 246899999999999999999999999999999996 9987
Q ss_pred CCCCccccccccccCCceEEEEeCC
Q 039939 382 ADDYPIAYPYVEFRRGLLLEIERTN 406 (411)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~v~~~~r~ 406 (411)
+ ........+..+.+++|++++|+
T Consensus 345 ~-~~~~~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 345 D-TEKVPNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp E-EEECCCSSBCCEEEEEEEEEC--
T ss_pred C-ceeccCCcccCCceeEEEeccCC
Confidence 5 22223345667778999999885
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=8.7e-53 Score=394.38 Aligned_cols=348 Identities=17% Similarity=0.162 Sum_probs=253.1
Q ss_pred CCcccc---hhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCChh---H--
Q 039939 2 GWPICG---ETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKP---M-- 73 (411)
Q Consensus 2 ~~P~lG---~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~---~-- 73 (411)
++|.+| ....+. .||+.++.+++ ++|||+++ .+..+++|+++++++++|.+.. .|++..... .
T Consensus 19 ~~P~~~~dp~~~~~~-----~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~ 89 (412)
T 4dnj_A 19 GVPHLGIDPFALDYF-----ADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKK 89 (412)
T ss_dssp TSCEECCCTTSHHHH-----HSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTT
T ss_pred CCCccCCCCCCHHHH-----hCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccc
Confidence 467776 223343 37899998886 57999865 4567899999999999997654 343321111 1
Q ss_pred -HhhhccccccccCChhHHHHHHHHHhhhCCCCchhhhhHH-----------------------------HHHHHHHHHH
Q 039939 74 -HGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTPAFLHS-----------------------------FTINLMVKHL 123 (411)
Q Consensus 74 -~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~~~~~~-----------------------------~~~~~~~~~~ 123 (411)
....+...++..||+.|+++|++++++|+.++++. ++. +...+++.++
T Consensus 90 ~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~--~~~~i~~~~~~l~~~~~~~~~~~D~v~~~~~~~~~~~i~~l~ 167 (412)
T 4dnj_A 90 EKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKR--LRDGFAAAADAKIDELLARGGNIDAIADLAEAYPLSVFPDAM 167 (412)
T ss_dssp SCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHH--HHHHHHHHHHHHHHHHHHTTSEEETCCCCCCHHHHHHHHHHH
T ss_pred cccccCCCccccCChHHHHHHHhhcccccCHHHHHH--hhHHHHHHHHHHHHhhhccCCCceeHHHHHhhhhHhHHHHHc
Confidence 11122346788999999999999999999988876 322 4455555433
Q ss_pred cCCCCC-hhHHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC--
Q 039939 124 LSIEPE-EPIAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR-- 200 (411)
Q Consensus 124 fG~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~-- 200 (411)
|.... ......+...+.. .... . ....+........+...+.+..+.. ....+.+..++...
T Consensus 168 -g~~~~~~~~~~~~~~~~~~---~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~ 232 (412)
T 4dnj_A 168 -GLKQEGRENLLPYAGLVFN---AFGP--------P-NELRQSAIERSAPHQAYVAEQCQRP--NLAPGGFGACIHAFSD 232 (412)
T ss_dssp -TCCSTTGGGHHHHHHHHHH---HTSC--------S-SHHHHHHHHTCHHHHHHHHHHTSGG--GSCTTSHHHHHHHTTT
T ss_pred -CCchhhhhhhhhhhhcccc---cccc--------c-HHHHHHHHHHHHHHHHHHHHHHHhh--ccccccchhhhHhhhh
Confidence 33322 1122222211111 1100 0 1111111122222233333333222 22334444444322
Q ss_pred --CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHH
Q 039939 201 --SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILE 277 (411)
Q Consensus 201 --~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E 277 (411)
+++++ ++..++..+++||+|||+ +++|++++|++||++|+||++|. .|+.++++|
T Consensus 233 ~~~l~~~-e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~---------------------~~~~~~~eE 290 (412)
T 4dnj_A 233 TGEITPE-EAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP---------------------SLARNAFEE 290 (412)
T ss_dssp TTSSCTT-HHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------GGHHHHHHH
T ss_pred ccchhHH-HHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc---------------------cccccccce
Confidence 68888 999999999999999999 99999999999999999998762 467899999
Q ss_pred hhcCCCCCcccceeeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCcc
Q 039939 278 AMRCGNVVKFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPG 357 (411)
Q Consensus 278 ~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G 357 (411)
++|++|+++.+.|++++|++++||.||||+.|+++.+++||||++|+||++|+|||| ...++|||+|+|.|+|
T Consensus 291 ~lR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~-------~~~~lpFG~G~r~CiG 363 (412)
T 4dnj_A 291 AVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRK-------TSGHVGFGSGVHMCVG 363 (412)
T ss_dssp HHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC-------CTTCCTTCCSTTSCTT
T ss_pred eeeecCCcccccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCC-------CCCCCCcCCCCcCChh
Confidence 999999999999999999999999999999999999999999999999999999996 3568999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC-eEEecCCCCccccccccccCCceEEEEe
Q 039939 358 AELAKVEISFFLHHLVLNY-RWKTQADDYPIAYPYVEFRRGLLLEIER 404 (411)
Q Consensus 358 ~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 404 (411)
++||++|++++++.|+++| ++++.++.+.....++..+++++|+++|
T Consensus 364 ~~lA~~E~~~~l~~Ll~rf~~~~l~~~~~~~~~~~~rg~~~LpV~~tP 411 (412)
T 4dnj_A 364 QLVARLEGEVVLAALARKVAAIEIAGPLKRRFNNTLRGLESLPIQLTP 411 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEECSCCEEEECSSBEEEEECEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeECCCCeeecCCCccCCcceeEEEEe
Confidence 9999999999999999999 7999876655555667778889999986
No 75
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.6e-53 Score=388.02 Aligned_cols=291 Identities=19% Similarity=0.269 Sum_probs=229.3
Q ss_pred hhhccccccccCCCCeEEecChhhhHHHHhcCCccccccCCh-hHHhhhccccccccCChhHHHHHHHHHhhhCCCCchh
Q 039939 30 SIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPK-PMHGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTP 108 (411)
Q Consensus 30 ~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~-~~~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~ 108 (411)
++||||+++ | ++++++|+++++++.++. .|+++... .... +..++++.+|+.|+++|++++++|+.++++.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~--~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~ 73 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSNA--GGISFITMDNPEHKEFRDISAPYFLPSKIND 73 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHHHSHHHHGG
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCCc--cccccccCCchHHHHHHHHhhhhcCHHHHHH
Confidence 589999987 3 999999999999998763 55544311 0122 2467888999999999999999998876554
Q ss_pred h-----------------------hhHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhcccCccCCCc-ccHHHHH
Q 039939 109 A-----------------------FLHSFTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFVSLPVYIPGT-HYANAVK 164 (411)
Q Consensus 109 ~-----------------------~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~-~~~~~~~ 164 (411)
. +...+++++++.+ ||.+.++ ...+.+....+...+ .|.. ..++. +
T Consensus 74 ~~~~i~~~~~~l~~~l~~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~~------~p~~~~~~~~-~ 143 (343)
T 2rfb_A 74 YKDFIEETSNDLIKNIDNKDIISEYAVRLPVNIISKI-LGIPDSD--MPLFKLWSDYIIGNK------RDENFNYVNN-R 143 (343)
T ss_dssp GHHHHHHHHHHHHTTCTTSCHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHTSC------CSSHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhccccCHHHHHhhhhhHHHHHHH-cCCCHHH--HHHHHHHHHHHhhcc------CcchhhHHHH-H
Confidence 0 0011788889888 9987653 233333333332211 1211 11222 3
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHhhChHH
Q 039939 165 ARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETTAT-LLALIVYFLAHAPAV 239 (411)
Q Consensus 165 ~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt~-~l~~~l~~L~~~p~~ 239 (411)
+...+.+++.+++ ..| ++.+++.. .++++ ++..++..+++||+|||+ +++|++++|++||++
T Consensus 144 ~~~~~~~~~~~~i-----------~~d-l~~ll~~~~~~~~l~~~-ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~ 210 (343)
T 2rfb_A 144 MVSRLLEIFKSDS-----------HGI-INVLAGSSLKNRKLTMD-EKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDI 210 (343)
T ss_dssp HHHHHHHHHHSCC-----------SSH-HHHHHTCBCSSSBCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHH-----------hcc-HHHHHhhhcCCCCCCHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHH
Confidence 4444444444333 356 88888642 48888 999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCC-cccceeeccccccCCEEeCCCcEEecchhhhcc
Q 039939 240 FQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVV-KFVHREAIRDVKFKEYLIPSGWKVLPVFTAAHF 318 (411)
Q Consensus 240 ~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~-~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~ 318 (411)
|+++++|+ +|+|+|+||++|++ +.++|.+.+|++++||.||||+.|+++.+++||
T Consensus 211 ~~~l~~E~------------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r 266 (343)
T 2rfb_A 211 IDDALKNR------------------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANR 266 (343)
T ss_dssp HHHHHHCH------------------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTCEEEECHHHHTT
T ss_pred HHHHHcCc------------------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCCEEEEChhhhCC
Confidence 99999995 59999999999999 988999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhCe-EEecCC
Q 039939 319 DLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNYR-WKTQAD 383 (411)
Q Consensus 319 d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~ 383 (411)
||++|+||++|+|||| ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++
T Consensus 267 d~~~~~dp~~F~PeR~--------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 324 (343)
T 2rfb_A 267 DETFFDEPDLFKIGRR--------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYK 324 (343)
T ss_dssp CTTTSSSTTSCCTTCS--------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred CcccCCCccccCCCCC--------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence 9999999999999994 36899999999999999999999999999999997 999763
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=1.6e-48 Score=364.84 Aligned_cols=342 Identities=15% Similarity=0.173 Sum_probs=254.1
Q ss_pred CCCchhHHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhcCCccccccCChhH--HhhhccccccccCChhHHHHH
Q 039939 18 SNSTGSFLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASYPKPM--HGILGKLSLLTVSGDLHKKLR 94 (411)
Q Consensus 18 ~~~~~~~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~~~~~--~~~~g~~~l~~~~g~~~~~~R 94 (411)
..+|+..+.+++++.+ +++....+| ..++|++++.+++++.+.. .|++...... ....+...++..|+++|+++|
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~R 113 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYR 113 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCch-hccCCCcccccccccccccCcccCCcHHHHHHH
Confidence 4578888988876643 455544343 5788999999999997653 4554322111 111122345678999999999
Q ss_pred HHHHhhhCCCCchh--hhhHH------------------------HHHHHHHHHHcCCCCChhHHHHHHHHHHHHHhhhc
Q 039939 95 NVAVSFIGASKSTP--AFLHS------------------------FTINLMVKHLLSIEPEEPIAFKILEDFQTFMKGFV 148 (411)
Q Consensus 95 ~~~~~~~~~~~l~~--~~~~~------------------------~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 148 (411)
++++++|++++++. ..+++ +...+++ .++|...++ ...+. .+...+.
T Consensus 114 rll~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~g~~D~v~~~a~~l~~~vi~-~llg~~~~d--~~~~~----~~~~~~~ 186 (417)
T 4dxy_A 114 KALDKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFM-ALADLPLED--IPVLS----EYARQMT 186 (417)
T ss_dssp HHHHHHHCHHHHHTTHHHHHHHHHHHHHHHHTTSEEEHHHHTTTTHHHHHHH-HHTTCCGGG--HHHHH----HHHHHHH
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeHHHHHhhhHHHHHH-HHcCCCHHH--HHHHH----hhhhhhc
Confidence 99999999988776 11111 4444444 345655432 22222 2222222
Q ss_pred ccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccC----CCCHHHHHHHHHHHHHhcchHHHH
Q 039939 149 SLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKR----SLSEEETVSIVLDIMLGGYETTAT 224 (411)
Q Consensus 149 ~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~~~~~~~~~~~ag~~tt~ 224 (411)
......+.........+...+..++.++++++++.+ .+|+++.|+... .++++ ++..++..+++||+|||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~----~ddl~s~L~~~~~~~~~~~~~-e~~~~~~~ll~AG~eTTa 261 (417)
T 4dxy_A 187 RPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGD----GDDLITLMVNSEINGERIAHD-KAQGLISLLLLGGLDTVV 261 (417)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----CCSHHHHHHTCEETTEECCHH-HHHHHHHHHHHHTTHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----ccchhhhhccccccCCccchh-HHHHHHHHHHhhcccchh
Confidence 222223333334556677888888899888887554 678999988653 48888 999999999999999999
Q ss_pred -HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccceeeccccccCCEEe
Q 039939 225 -LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHREAIRDVKFKEYLI 303 (411)
Q Consensus 225 -~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~i 303 (411)
+++|++++|++||++++++++|...+. .+ .|.+|++++.+.+.|++++|++++|+.|
T Consensus 262 ~~l~~~~~~L~~~P~~~~~l~~e~~~~~---------------------~a-vee~~~~~~~~~~~R~a~~d~~l~G~~I 319 (417)
T 4dxy_A 262 NFLSFFMIHLARHPELVAELRSDPLKLM---------------------RG-AEEMFRRFPVVSEARMVAKDQEYKGVFL 319 (417)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHCHHHHH---------------------HT-HHHHHHHSCCBEEEEEECSCEEETTEEE
T ss_pred hHHHHHHHHHHhCchhhhhhccCccccc---------------------cc-eeeeeccccccccccccccceEecCccc
Confidence 999999999999999999999966542 22 3444445566677899999999999999
Q ss_pred CCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHHHHHHhC-eEEecC
Q 039939 304 PSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLHHLVLNY-RWKTQA 382 (411)
Q Consensus 304 p~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~ 382 (411)
|||+.|+++.+++||||++|+||++|+||| .+..++|||+|+|.|+|++||++|++++++.|+++| ++++++
T Consensus 320 p~G~~V~~~~~a~~rDp~~f~dP~~FdpeR-------~~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~ 392 (417)
T 4dxy_A 320 KRGDMILLPTALHGLDDAANPEPWKLDFSR-------RSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKE 392 (417)
T ss_dssp CTTCEEEEETHHHHTCTTTSSSTTSCCTTC-------SCCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECT
T ss_pred cCCCEEEEeehhhcCChhhCCCccccCCCC-------CCCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence 999999999999999999999999999999 556789999999999999999999999999999999 899986
Q ss_pred CCCcc-ccccccccCCceEEE
Q 039939 383 DDYPI-AYPYVEFRRGLLLEI 402 (411)
Q Consensus 383 ~~~~~-~~~~~~~~~~~~v~~ 402 (411)
++.+. ...++.....++|++
T Consensus 393 ~~~~~~~~~~~~g~~~LPv~~ 413 (417)
T 4dxy_A 393 GETPIYHSGIVAAVENVPLVW 413 (417)
T ss_dssp TCCCEEECSSBCEEECCEEEC
T ss_pred CCCeeecCCcccCceeeeEEe
Confidence 65443 344566677788876
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.6e-46 Score=343.97 Aligned_cols=306 Identities=14% Similarity=0.105 Sum_probs=209.6
Q ss_pred CCcccchhhhhcccCCCCCchhHHHHHhhhhccccccccCCCCeEEecChhhhHHHHhcCCccccccC---Chh------
Q 039939 2 GWPICGETLAFLKPHKSNSTGSFLQQHCSIYGQVFKSHLFCSPAIVSCDHELNMFILQNEEKYFQASY---PKP------ 72 (411)
Q Consensus 2 ~~P~lG~~~~~~~~~~~~~~~~~l~~~~~~yG~v~~~~~~~~~~vvv~~pe~~~~vl~~~~~~~~~~~---~~~------ 72 (411)
++|++|+...++.+....+|+.++.+++++ ||+++. .+.+++++++.+++++.+. .|+... ...
T Consensus 42 ~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~~~~~~~~ 114 (381)
T 2yjn_B 42 GYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPEWMRAAGA 114 (381)
T ss_dssp HHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCHHHHHHTC
T ss_pred cccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccccccccccc
Confidence 579999887765444456899999999865 999875 4689999999999999863 354332 111
Q ss_pred -HHhhhccccccccCChhHHHHHHHHHhhhCCCCchh--------------------hhhHHHHHHHHHHHHcCCCCChh
Q 039939 73 -MHGILGKLSLLTVSGDLHKKLRNVAVSFIGASKSTP--------------------AFLHSFTINLMVKHLLSIEPEEP 131 (411)
Q Consensus 73 -~~~~~g~~~l~~~~g~~~~~~R~~~~~~~~~~~l~~--------------------~~~~~~~~~~~~~~~fG~~~~~~ 131 (411)
... ++ .+++..||+.| ++.|+ + ... .+...++++++++ +||.+.++.
T Consensus 115 ~~~~-~~-~~l~~~dg~~H-------~~~Ft-~-~~~i~~~~~~ll~~~~g~~Dl~~~~a~~l~~~vi~~-l~G~~~~~~ 182 (381)
T 2yjn_B 115 PPAE-WA-QPFRDVHAASW-------EGEVP-D-VGELAESFAGLLPGAGARLDLVGDFAWQVPVQGMTA-VLGAAGVLR 182 (381)
T ss_dssp CHHH-HT-HHHHHHHHCCC-------CSCCC-C-CSCHHHHTSTTSCC------CCCCCCTHHHHHHHHT-C-----CCH
T ss_pred ccch-hh-hhhhhCCchhh-------hhccC-C-hHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH-HcCCCHHHH
Confidence 112 23 46777889999 45554 1 110 0111288888887 488877652
Q ss_pred HHHHHHHHHHHHHhhhcccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCchHHHHHccCCCCHHHHHHHH
Q 039939 132 IAFKILEDFQTFMKGFVSLPVYIPGTHYANAVKARARLSRTVREIVRERQHENMRAGEGDFLDVILKKRSLSEEETVSIV 211 (411)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~ 211 (411)
++.+.+..... .+ ++.....+ ..+ .+..++. .+
T Consensus 183 ---~~~~~~~~~~~----~~--~~~~~~~~---~~~------------------------~~~~l~~-----------~~ 215 (381)
T 2yjn_B 183 ---GAAWDARVSLD----AQ--LSPQQLAV---TEA------------------------AVAALPA-----------DP 215 (381)
T ss_dssp ---HHHHHHTTHHH----HT--TSCCCHHH---HHH------------------------HHHHCC-------------C
T ss_pred ---HHHHHHHHhcc----CC--CCHHHHHH---HHH------------------------HHHHHHH-----------HH
Confidence 22222211110 00 11111110 000 0111110 56
Q ss_pred HHHHHhcchHHHH-HHHHHHHHHhhChHHHHHHHHHHHHHhccCCCCCCCChhhhccChhHHHHHHHhhcCCCCCcccce
Q 039939 212 LDIMLGGYETTAT-LLALIVYFLAHAPAVFQKLKEEHRAIRKSKQDEEPLNWEDYQQMEFTNNVILEAMRCGNVVKFVHR 290 (411)
Q Consensus 212 ~~~~~~ag~~tt~-~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R 290 (411)
+..+++||+|||+ +++|++++|++||++++++++|++ |++++|+|+||++|+++.+.|
T Consensus 216 ~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------~l~~~i~E~LR~~pp~~~~~R 274 (381)
T 2yjn_B 216 ALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA---------------------AAQRTVAEVLRLHPALHLERR 274 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC-----------------------HHHHHHHHHHSCSCSEEEE
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH---------------------HHHHHhCeeeeecCCCcceeE
Confidence 7888999999999 999999999999999999998842 889999999999999999889
Q ss_pred eeccccccCCEEeCCCcEEecchhhhccCCCCCCCCCCCCCCCCCCCccCCCCceeeccCCCCCCccHHHHHHHHHHHHH
Q 039939 291 EAIRDVKFKEYLIPSGWKVLPVFTAAHFDLNLHENPSEFNPSRWTDKASVISKRVMPFGGGPRLCPGAELAKVEISFFLH 370 (411)
Q Consensus 291 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~ 370 (411)
++++|++++|+.||||+.|+++.+++||||++|+||++|+|+||++ ..++|||.| |.|+|++||++|++++++
T Consensus 275 ~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~------~~~l~FG~G-h~C~G~~lA~~e~~~~l~ 347 (381)
T 2yjn_B 275 TATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA------DRALSAHRG-HPGRLEELVTALATAALR 347 (381)
T ss_dssp EESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC------CCCCC-----CCSSHHHHHHHHHHHHHH
T ss_pred EECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC------CCccCCCCC-CCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999964 569999999 999999999999999999
Q ss_pred HHHHhC-eEEecCCC-CccccccccccCCceEE
Q 039939 371 HLVLNY-RWKTQADD-YPIAYPYVEFRRGLLLE 401 (411)
Q Consensus 371 ~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~v~ 401 (411)
.|+++| ++++.+++ ......++..+.+++|+
T Consensus 348 ~ll~~~p~~~l~~~~~~~~~~~~~r~~~~LpV~ 380 (381)
T 2yjn_B 348 AAAKALPGLTPSGPVVRRRRSPVLRGTNRCPVE 380 (381)
T ss_dssp HTTTTCCC-----CCEECTTCSSSCCEEECCCC
T ss_pred HHHHhCCCcEECCCCcccccCcccCCCccceee
Confidence 999999 99987654 22223344555555554
No 78
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=62.68 E-value=11 Score=24.10 Aligned_cols=40 Identities=15% Similarity=0.012 Sum_probs=29.0
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhcCC
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQNEE 62 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~~~ 62 (411)
+-+.++..+||+|..+.+. |.-+|...+++.++.++....
T Consensus 14 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 14 EKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp HHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 4578888999998777663 233456688888888887544
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=54.40 E-value=12 Score=26.26 Aligned_cols=43 Identities=14% Similarity=0.059 Sum_probs=30.4
Q ss_pred hHHHHHhhhhccccccccC--------CCCeEEecChhhhHHHHhcCCccc
Q 039939 23 SFLQQHCSIYGQVFKSHLF--------CSPAIVSCDHELNMFILQNEEKYF 65 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~--------~~~~vvv~~pe~~~~vl~~~~~~~ 65 (411)
+-|.++..+||+|..+.+. |.-+|...+++.++.++..+...+
T Consensus 26 ~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~ 76 (103)
T 1s79_A 26 DDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKY 76 (103)
T ss_dssp HHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCC
T ss_pred HHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEE
Confidence 4578888999998877663 234566688999998887443333
No 80
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=50.00 E-value=16 Score=23.39 Aligned_cols=40 Identities=8% Similarity=-0.004 Sum_probs=27.6
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcCC
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNEE 62 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~~ 62 (411)
+-+.++..+||+|..+.+.. .-+|...+++.++.++..+.
T Consensus 14 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 62 (75)
T 2mss_A 14 EDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF 62 (75)
T ss_dssp HHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred HHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence 45788889999987776632 12355578888888876443
No 81
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=45.34 E-value=17 Score=23.73 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=28.0
Q ss_pred hHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 22 ~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 22 NVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 5678889999998887765 2234566788888887764
No 82
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.43 E-value=22 Score=24.56 Aligned_cols=38 Identities=13% Similarity=-0.064 Sum_probs=28.0
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 28 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 28 DSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp HHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 4578889999998877764 2335666888888888763
No 83
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=43.10 E-value=18 Score=24.41 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=26.4
Q ss_pred hHHHHHhhhhccccccccC----CCCeEEecChhhhHHHH
Q 039939 23 SFLQQHCSIYGQVFKSHLF----CSPAIVSCDHELNMFIL 58 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~----~~~~vvv~~pe~~~~vl 58 (411)
+-|.++..+||+|..+.+. |.-+|...+++.++.+.
T Consensus 26 ~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~~ 65 (89)
T 3d2w_A 26 EELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSLC 65 (89)
T ss_dssp HHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHHT
T ss_pred HHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHHc
Confidence 4588899999998888774 34456668888877543
No 84
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.68 E-value=17 Score=25.46 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=29.2
Q ss_pred hhHHHHHhhhhccccccccC--CCCeEEecChhhhHHHHhc
Q 039939 22 GSFLQQHCSIYGQVFKSHLF--CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~--~~~~vvv~~pe~~~~vl~~ 60 (411)
..-|.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 29 ~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 29 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp HHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 34578899999998777763 4456666888888888764
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=40.49 E-value=18 Score=25.74 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=28.4
Q ss_pred hHHHHHhhhhccccccccC--CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF--CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~--~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 31 ~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 31 QDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp THHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 3578889999998877764 4455666888888887763
No 86
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.94 E-value=21 Score=23.80 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=27.2
Q ss_pred hHHHHHhhhhccccccccC----CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF----CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~----~~~~vvv~~pe~~~~vl~ 59 (411)
+-|.++..+||+|..+.+. |.-+|...+++.++.+..
T Consensus 20 ~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~~~ 60 (88)
T 1wf0_A 20 DELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG 60 (88)
T ss_dssp HHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT
T ss_pred HHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHHhc
Confidence 4588899999999888774 345666788888876543
No 87
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.44 E-value=19 Score=25.36 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=27.7
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+.+. |.-+|-..+++.+...+.
T Consensus 31 ~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 31 GEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp HHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4588999999998887764 334666788888887775
No 88
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=39.14 E-value=27 Score=24.08 Aligned_cols=38 Identities=11% Similarity=0.124 Sum_probs=28.5
Q ss_pred hHHHHHhhhhccccccccCC-CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 26 ~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 26 EILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp HHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 45788899999988887643 445666888888887763
No 89
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=38.52 E-value=24 Score=24.03 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=24.7
Q ss_pred hHHHHHhhhhccccccccCC-C--CeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-S--PAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-~--~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+++.- + -+|-..+++.+.....
T Consensus 22 ~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 22 PTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp HHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 46889999999998877522 3 3444467766555543
No 90
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=38.51 E-value=24 Score=24.00 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=28.5
Q ss_pred hHHHHHhhhhccccccccC-CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 26 ~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 26 EDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp HHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 4578889999999887763 3345666888888888764
No 91
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=38.13 E-value=16 Score=26.06 Aligned_cols=38 Identities=11% Similarity=0.104 Sum_probs=28.1
Q ss_pred hHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 20 ~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 20 KALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp HHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 4688999999998777653 1235677888888887754
No 92
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=37.39 E-value=36 Score=22.97 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=26.6
Q ss_pred HHHHhhhhccccccccC------CCCeEEecChhhhHHHHhc
Q 039939 25 LQQHCSIYGQVFKSHLF------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 25 l~~~~~~yG~v~~~~~~------~~~~vvv~~pe~~~~vl~~ 60 (411)
+.++..+||+|..+.+. |.-+|...+++.+..++..
T Consensus 29 l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 29 LHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp HHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 33888999998777664 4456777888888887753
No 93
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.58 E-value=41 Score=23.23 Aligned_cols=38 Identities=8% Similarity=-0.022 Sum_probs=27.4
Q ss_pred hHHHHHhhhhccccccccCCC----------CeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFCS----------PAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~~----------~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+... -+|...+++.++.++..
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 77 (107)
T 2cph_A 30 REIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 77 (107)
T ss_dssp HHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHH
Confidence 457888999999887776432 24556788888887754
No 94
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=36.40 E-value=33 Score=24.69 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=27.7
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 37 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 82 (126)
T 3ex7_B 37 EDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAME 82 (126)
T ss_dssp HHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 4578888999998877663 233566788888888875
No 95
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=35.82 E-value=20 Score=23.73 Aligned_cols=40 Identities=18% Similarity=0.131 Sum_probs=27.9
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcCC
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNEE 62 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~~ 62 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++....
T Consensus 26 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~ 74 (87)
T 3s7r_A 26 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKE 74 (87)
T ss_dssp HHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSC
T ss_pred HHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCC
Confidence 45788889999987776531 13455678888888876543
No 96
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.62 E-value=34 Score=23.67 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=29.2
Q ss_pred HHHHHhhhhc-cccccccCCCCeEEecChhhhHHHHhc
Q 039939 24 FLQQHCSIYG-QVFKSHLFCSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 24 ~l~~~~~~yG-~v~~~~~~~~~~vvv~~pe~~~~vl~~ 60 (411)
-|.++..+|| +|..+. +|.-+|...+.+.++..+..
T Consensus 29 ~L~~lF~~yGG~Vl~Vt-gG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 29 RLRRLSDNCGGKVLSIT-GCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp HHHHHHHTTTCCEEECC-TTCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHcCCeeEEEe-cCEEEEEECCHHHHHHHHHH
Confidence 3678899995 988884 58888999999999888754
No 97
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.58 E-value=35 Score=22.73 Aligned_cols=38 Identities=8% Similarity=-0.026 Sum_probs=28.0
Q ss_pred hHHHHHhhhhccccccccCC-CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 24 ~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 24 QELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp HHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 45788889999988887743 345566888888887753
No 98
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.25 E-value=36 Score=23.96 Aligned_cols=40 Identities=13% Similarity=0.105 Sum_probs=27.8
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhcCC
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQNEE 62 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~~~ 62 (411)
.-|.++..+||.|..+.+. |.-+|...+++.++.++.-+.
T Consensus 40 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 40 RDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp HHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 4578888999998877764 223456678888887773343
No 99
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=35.08 E-value=28 Score=24.01 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC-----C----CeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-----S----PAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-----~----~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+||+|..+.+.. . -+|-..+++.++.++..
T Consensus 34 ~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 34 DELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp HHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 45788899999987776531 1 24566788888877753
No 100
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=34.68 E-value=29 Score=23.68 Aligned_cols=38 Identities=13% Similarity=0.019 Sum_probs=27.8
Q ss_pred hHHHHHhhhhccccccccC-CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+.+.++.++..
T Consensus 38 ~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 38 EDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp HHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 4578889999998887763 3345566788888887763
No 101
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=34.60 E-value=33 Score=23.95 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+. |.-+|...+++.+..++.
T Consensus 41 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 41 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp HHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 4578888999998777763 223556678888888775
No 102
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.49 E-value=37 Score=23.01 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=25.0
Q ss_pred HHHhhhhccccccccC------CCCeEEecChhhhHHHHh
Q 039939 26 QQHCSIYGQVFKSHLF------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 26 ~~~~~~yG~v~~~~~~------~~~~vvv~~pe~~~~vl~ 59 (411)
.++..+||+|..+.+. +.-+|...+++.++.++.
T Consensus 31 ~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 31 QEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp HHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred HHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 3888999998877764 234566678888887775
No 103
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.32 E-value=39 Score=23.78 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=28.3
Q ss_pred hhHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHhc
Q 039939 22 GSFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~~ 60 (411)
..-|.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 24 e~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 24 AAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp HHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 34688899999999887763 3345666788888877753
No 104
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.31 E-value=21 Score=24.93 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=28.0
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+++. +.-+|-..+.+.+..++.
T Consensus 31 ~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 31 YQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp HHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4578899999998888764 334677788888887765
No 105
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=34.25 E-value=24 Score=24.25 Aligned_cols=37 Identities=14% Similarity=-0.033 Sum_probs=27.4
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~ 59 (411)
..|.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 27 ~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 27 KALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp HHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 4578889999999887764 223566678888888775
No 106
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=33.99 E-value=36 Score=22.20 Aligned_cols=37 Identities=8% Similarity=-0.046 Sum_probs=26.2
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 22 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 22 KVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp HHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 4578888999998777652 123456678888887774
No 107
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=33.89 E-value=49 Score=22.41 Aligned_cols=38 Identities=16% Similarity=0.034 Sum_probs=27.5
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 23 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 23 EDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp HHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 45788889999988777632 234666888888887743
No 108
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.53 E-value=32 Score=23.62 Aligned_cols=38 Identities=8% Similarity=0.021 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 30 ~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 30 PDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp HHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 4578889999998777663 2234556788888887753
No 109
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=33.16 E-value=35 Score=23.09 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+.. .-+|-..+++.+..++.
T Consensus 17 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 17 EQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp HHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 45788889999988777632 23455678888887775
No 110
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=32.80 E-value=40 Score=23.91 Aligned_cols=38 Identities=13% Similarity=-0.031 Sum_probs=27.6
Q ss_pred hHHHHHhhhhc-cccccccC-----CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYG-QVFKSHLF-----CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG-~v~~~~~~-----~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+|| .|..+.+. |.-+|...+++.++..+..
T Consensus 43 ~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 43 QDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp HHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 45788889999 77666653 4456777888888887753
No 111
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.77 E-value=25 Score=25.47 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+.+. |.-+|-..+.+.+..++.
T Consensus 46 ~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 46 GEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp HHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4578899999998877664 334566677777777664
No 112
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.57 E-value=33 Score=22.98 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=27.4
Q ss_pred hHHHHHhhhhccccccccCC-CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 25 ~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 25 QELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp HHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 45788999999988887653 234455778888877753
No 113
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.38 E-value=26 Score=24.54 Aligned_cols=37 Identities=5% Similarity=-0.008 Sum_probs=26.8
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+.+. |.-+|-..+.+.+..++.
T Consensus 30 ~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 30 ADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp HHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4588999999998887763 234556677887777764
No 114
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.87 E-value=41 Score=23.11 Aligned_cols=38 Identities=13% Similarity=0.046 Sum_probs=28.2
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 30 PLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 45788899999987776633 235666888888888864
No 115
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.83 E-value=23 Score=24.62 Aligned_cols=37 Identities=8% Similarity=0.079 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+.+. |.-+|-..+.+.++.++.
T Consensus 30 ~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 30 TEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp HHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4578899999998877663 234566678887777765
No 116
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=31.49 E-value=53 Score=22.94 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=28.4
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcC
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNE 61 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~ 61 (411)
.-|.++..+||+|..+.+.. .-+|...+.+.++.++...
T Consensus 40 ~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 40 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp HHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred HHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 45788889999987776532 2356668888888888654
No 117
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.42 E-value=33 Score=22.83 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=27.0
Q ss_pred hHHHHHhhhhccccccccC-CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF-CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+. +.-+|-..+++.++.++.
T Consensus 23 ~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 23 QEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp HHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 4578889999998777764 334455678888888774
No 118
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.27 E-value=34 Score=23.93 Aligned_cols=37 Identities=8% Similarity=0.014 Sum_probs=25.5
Q ss_pred hHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~ 59 (411)
+-+.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 44 ~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 44 PDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp HHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 4578888999998777663 223455577777777665
No 119
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=31.06 E-value=24 Score=24.41 Aligned_cols=37 Identities=5% Similarity=0.036 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC--------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC--------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~--------~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 30 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp HHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 45788899999988776642 23455678888887775
No 120
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.44 E-value=36 Score=23.13 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=27.7
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcC
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNE 61 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~ 61 (411)
.-|.++..+||+|..+.+.. .-+|...+.+.++.++..+
T Consensus 25 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~ 72 (99)
T 2dgs_A 25 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMH 72 (99)
T ss_dssp HHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhC
Confidence 45788899999987776632 2345568888888887633
No 121
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.20 E-value=38 Score=22.97 Aligned_cols=38 Identities=11% Similarity=0.118 Sum_probs=26.9
Q ss_pred hHHHHHhhhhcccc-ccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVF-KSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~-~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+||+|. .+.+.. .-+|...+++.++.++..
T Consensus 24 ~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 24 NFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp HHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred HHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 45788889999988 766532 124556788888888763
No 122
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=29.98 E-value=24 Score=24.96 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=28.5
Q ss_pred hhHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 22 GSFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
...|.++..+||+|..+.+.- .-+|...+++.++.++..
T Consensus 20 e~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 20 ETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp HHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 346889999999988876631 125777888888887753
No 123
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.89 E-value=50 Score=20.92 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=25.6
Q ss_pred hHHHHHhhhhccccccccCCC---------CeEEecChhhhHHHHhcC
Q 039939 23 SFLQQHCSIYGQVFKSHLFCS---------PAIVSCDHELNMFILQNE 61 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~~---------~~vvv~~pe~~~~vl~~~ 61 (411)
.-+.++..+||+|..+.+... -+|-..+++.++.++...
T Consensus 15 ~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 15 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp HHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred HHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 357888899999877765321 134446777777777544
No 124
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=29.84 E-value=28 Score=24.06 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=26.7
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+.+.++.++..
T Consensus 38 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 38 EDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 4578888999998777663 1234556788888877753
No 125
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.67 E-value=44 Score=22.31 Aligned_cols=37 Identities=22% Similarity=0.176 Sum_probs=27.0
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 31 ~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 31 NDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp HHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 45788899999987776632 23566688888888775
No 126
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=29.65 E-value=45 Score=23.65 Aligned_cols=38 Identities=11% Similarity=-0.042 Sum_probs=27.7
Q ss_pred hHHHHHhhhhccccccccCC--------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC--------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~--------~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+.. .-+|...+.+.++.++..
T Consensus 22 ~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 22 KMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp HHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 45788899999987777633 234566888888887753
No 127
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.55 E-value=38 Score=22.12 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=27.4
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 27 ~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 27 TDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp HHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 4578888999998777663 2345556788888887763
No 128
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=29.39 E-value=53 Score=21.55 Aligned_cols=43 Identities=26% Similarity=0.268 Sum_probs=28.1
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcCCccc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNEEKYF 65 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~~~~~ 65 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++.-+...+
T Consensus 21 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~ 72 (89)
T 3ucg_A 21 EELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 72 (89)
T ss_dssp HHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEE
T ss_pred HHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEE
Confidence 45788889999987776532 12455678888887774344333
No 129
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=29.30 E-value=35 Score=23.34 Aligned_cols=37 Identities=14% Similarity=-0.002 Sum_probs=26.7
Q ss_pred hHHHHHhhhhccccccccC----CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF----CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~----~~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+. |.-+|-..+++.++.++.
T Consensus 15 ~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 55 (101)
T 2hvz_A 15 GELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 55 (101)
T ss_dssp HHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHH
Confidence 4578889999998777763 223455578888888775
No 130
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=29.29 E-value=46 Score=15.74 Aligned_cols=12 Identities=17% Similarity=0.404 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHH
Q 039939 238 AVFQKLKEEHRA 249 (411)
Q Consensus 238 ~~~~~l~~Ei~~ 249 (411)
..|.++|+|+.+
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578899999764
No 131
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.13 E-value=43 Score=23.31 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+.+.++.++..
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 30 EALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp HHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 45788889999987777641 124555788888887753
No 132
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.05 E-value=30 Score=23.72 Aligned_cols=37 Identities=8% Similarity=-0.018 Sum_probs=26.0
Q ss_pred hHHHHHhhhhccccccccCC-------C--CeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-------S--PAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-------~--~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+.. . -+|...+++.++.++.
T Consensus 27 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 72 (102)
T 2cqb_A 27 KVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 72 (102)
T ss_dssp HHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHH
T ss_pred HHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 45788889999998877632 1 2344477888887775
No 133
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.78 E-value=28 Score=23.80 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=27.1
Q ss_pred hHHHHHhhhhccccccccCC--------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC--------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~--------~~~vvv~~pe~~~~vl~~ 60 (411)
+-+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 32 ~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 32 EELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp HHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 45788889999987776632 235666788888887743
No 134
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.78 E-value=29 Score=23.54 Aligned_cols=38 Identities=13% Similarity=-0.043 Sum_probs=27.5
Q ss_pred hHHHHHhhhhccccccccC------------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF------------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~------------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 20 ~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 20 ETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp HHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 4578888999998777664 1234566788888888764
No 135
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=28.78 E-value=50 Score=23.15 Aligned_cols=37 Identities=11% Similarity=-0.038 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccC------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~------~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+. |.-+|...+++.+..++.
T Consensus 23 ~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 23 EEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp HHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 4578889999998877662 234566678888887775
No 136
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.39 E-value=50 Score=22.30 Aligned_cols=37 Identities=8% Similarity=-0.046 Sum_probs=26.8
Q ss_pred hHHHHHhhhhccccccccCC---CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 32 ~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~ 71 (97)
T 1why_A 32 AALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACA 71 (97)
T ss_dssp HHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 45788899999988777643 33455578888887775
No 137
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=28.03 E-value=38 Score=23.85 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=26.7
Q ss_pred hHHHHHhhhhccccccccCCC---------CeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFCS---------PAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~~---------~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+||+|..+.+... -+|...+++.++.++..
T Consensus 40 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 40 QDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp HHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 457888899999877765321 24556788888887743
No 138
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.89 E-value=38 Score=23.26 Aligned_cols=37 Identities=14% Similarity=0.042 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccCC-------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-------~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 30 VLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp HHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 45788899999987776532 23455678888887775
No 139
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=27.85 E-value=32 Score=22.94 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 23 ~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 23 KMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp HHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 4578889999998777653 2234556788888877653
No 140
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.84 E-value=61 Score=22.75 Aligned_cols=40 Identities=8% Similarity=0.099 Sum_probs=29.0
Q ss_pred hHHHHHhhhhccccccccCCC---------CeEEecChhhhHHHHhcCC
Q 039939 23 SFLQQHCSIYGQVFKSHLFCS---------PAIVSCDHELNMFILQNEE 62 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~~---------~~vvv~~pe~~~~vl~~~~ 62 (411)
+-|.++..+||+|..+.+... -+|...+.+.++.++..-.
T Consensus 32 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 80 (116)
T 2cqd_A 32 ASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN 80 (116)
T ss_dssp HHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSS
T ss_pred HHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCC
Confidence 457888899999877776432 2456688898888886543
No 141
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.82 E-value=30 Score=23.60 Aligned_cols=38 Identities=11% Similarity=-0.013 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC---CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 30 ~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 30 EEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp HHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred HHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 45888999999988877643 234445778887777643
No 142
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.44 E-value=49 Score=22.92 Aligned_cols=38 Identities=5% Similarity=0.017 Sum_probs=27.3
Q ss_pred hHHHHHhhhhcc-ccccccC----------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQ-VFKSHLF----------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~-v~~~~~~----------~~~~vvv~~pe~~~~vl~~ 60 (411)
+-+.++..+||+ |..+.+. |.-+|-..+++.++.++..
T Consensus 23 ~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 23 EEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp HHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 457888899998 8777664 1234556788888888764
No 143
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.36 E-value=40 Score=23.81 Aligned_cols=39 Identities=5% Similarity=-0.038 Sum_probs=28.0
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcC
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNE 61 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~ 61 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..+
T Consensus 42 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~ 89 (116)
T 1x4b_A 42 ESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAAR 89 (116)
T ss_dssp HHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSC
T ss_pred HHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhC
Confidence 45788899999987776532 2245557888888888663
No 144
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=27.33 E-value=43 Score=23.43 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=27.4
Q ss_pred hHHHHHhhhhccccccccC-CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+.+.++.++..
T Consensus 46 ~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 46 SELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp HHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 4578889999998777764 3345556788888877753
No 145
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.31 E-value=44 Score=23.01 Aligned_cols=40 Identities=18% Similarity=0.108 Sum_probs=28.6
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcCC
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNEE 62 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~~ 62 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..+.
T Consensus 31 ~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~ 79 (105)
T 2dh8_A 31 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 79 (105)
T ss_dssp HHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCS
T ss_pred HHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCC
Confidence 45788889999987776532 23456688888888886543
No 146
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=27.22 E-value=45 Score=23.26 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=29.1
Q ss_pred hHHHHHhhhhccccccccCC---------CC--eEEecChhhhHHHHhc-CCccccc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SP--AIVSCDHELNMFILQN-EEKYFQA 67 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~--~vvv~~pe~~~~vl~~-~~~~~~~ 67 (411)
+-+.+.+.+||+|..+.+.. .- +|...+++.++..+.. ++..|.+
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~G 86 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFAN 86 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 45777888999998887642 22 3555788877776643 4444543
No 147
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.13 E-value=25 Score=24.22 Aligned_cols=38 Identities=11% Similarity=0.085 Sum_probs=27.3
Q ss_pred hHHHHHhhhhccccccccC-------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 30 ERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp HHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 4578888999998777664 2234566888888887753
No 148
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=27.12 E-value=35 Score=22.89 Aligned_cols=37 Identities=11% Similarity=-0.013 Sum_probs=26.7
Q ss_pred hHHHHHhhhhccccccccCC--------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC--------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~--------~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 31 ~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 31 EILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 45788899999987776632 23456678888888775
No 149
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=26.94 E-value=53 Score=21.44 Aligned_cols=38 Identities=5% Similarity=0.003 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 21 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 21 AAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45788889999987776632 124556778888877753
No 150
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=26.94 E-value=50 Score=23.19 Aligned_cols=38 Identities=5% Similarity=-0.009 Sum_probs=27.5
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 30 EDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 45788899999987776632 224666888888888753
No 151
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.86 E-value=78 Score=22.59 Aligned_cols=38 Identities=11% Similarity=-0.222 Sum_probs=27.7
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~~ 60 (411)
+-|++...+||.|..+.+. |.-+|-..+++.++..+..
T Consensus 42 ~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 42 NQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp HHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4688999999998777763 2345666788888877754
No 152
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=26.48 E-value=36 Score=24.41 Aligned_cols=43 Identities=19% Similarity=0.246 Sum_probs=28.7
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhcCCccc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQNEEKYF 65 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~~~~~~ 65 (411)
.-|.++..+||+|..+.+.. .-+|...+.+.++.++.-+...+
T Consensus 51 ~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~ 102 (124)
T 2jwn_A 51 QDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVF 102 (124)
T ss_dssp HHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeE
Confidence 45788889999987776521 23466688888888874343333
No 153
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=26.44 E-value=45 Score=23.24 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC-CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-~~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 43 ~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 81 (110)
T 1wf1_A 43 SDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLG 81 (110)
T ss_dssp HHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 45788899999988777622 234455778888877743
No 154
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=26.44 E-value=34 Score=23.45 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=27.1
Q ss_pred hHHHHHhhhhccccccccC--------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF--------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~--------~~~~vvv~~pe~~~~vl~ 59 (411)
+-+.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 24 ~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 24 TEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred HHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 4578888999998777653 223456678888888887
No 155
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.22 E-value=22 Score=25.40 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccCC---CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+.+.. .-+|-..+.+.+..++.
T Consensus 41 ~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 41 SAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp HHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 35788999999988887742 23566678887777765
No 156
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.08 E-value=47 Score=22.66 Aligned_cols=38 Identities=16% Similarity=0.016 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 27 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 1x5s_A 27 QSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73 (102)
T ss_dssp HHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 45788889999987777643 123555778888877743
No 157
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=26.05 E-value=55 Score=21.39 Aligned_cols=38 Identities=11% Similarity=0.049 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccC----------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF----------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~----------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 19 ~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 19 DHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp HHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 4578888999998777652 1234566788888888763
No 158
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.79 E-value=67 Score=22.23 Aligned_cols=37 Identities=11% Similarity=-0.093 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccCC------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~------~~~vvv~~pe~~~~vl~ 59 (411)
+-|.++..+||+|..+.+.. .-+|...+.+.++.++.
T Consensus 37 ~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~ 79 (109)
T 1x4a_A 37 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVY 79 (109)
T ss_dssp HHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHH
Confidence 45888999999987666532 22566678888888774
No 159
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.57 E-value=54 Score=21.98 Aligned_cols=38 Identities=11% Similarity=0.205 Sum_probs=27.1
Q ss_pred hHHHHHhhhhcccccc-ccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKS-HLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~-~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+ .+.. .-+|...+++.++.++..
T Consensus 20 ~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 67 (96)
T 1x5t_A 20 KLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 67 (96)
T ss_dssp HHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHT
T ss_pred HHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 4578889999998776 5432 224556888888888863
No 160
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=25.52 E-value=44 Score=24.34 Aligned_cols=38 Identities=11% Similarity=0.005 Sum_probs=26.9
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 61 ~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 61 RDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp HHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45788889999987776631 224555788888887763
No 161
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.48 E-value=62 Score=22.24 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=30.5
Q ss_pred hHHHHHhhhhccccc-cccC--------CCCeEEecChhhhHHHHhcCCcccccc
Q 039939 23 SFLQQHCSIYGQVFK-SHLF--------CSPAIVSCDHELNMFILQNEEKYFQAS 68 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~-~~~~--------~~~~vvv~~pe~~~~vl~~~~~~~~~~ 68 (411)
.-|.++..+||.|.. +.+. |.-+|...+++.++.++..+...+..+
T Consensus 30 ~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr 84 (104)
T 1wg5_A 30 EEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 84 (104)
T ss_dssp HHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSS
T ss_pred HHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCc
Confidence 457888899998654 4331 234566689999999887654444443
No 162
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=25.35 E-value=58 Score=22.34 Aligned_cols=37 Identities=11% Similarity=0.265 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 28 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 73 (106)
T 2dgp_A 28 KDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQS 73 (106)
T ss_dssp HHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 45788899999988777643 22455578888887775
No 163
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.13 E-value=53 Score=22.24 Aligned_cols=37 Identities=8% Similarity=0.061 Sum_probs=27.0
Q ss_pred hHHHHHhhhh--ccccccccC-CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIY--GQVFKSHLF-CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~y--G~v~~~~~~-~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+| |.|..+.+. +.-+|...+++.++.++.
T Consensus 30 ~~l~~~F~~~g~g~v~~~~~~~g~afV~f~~~~~A~~A~~ 69 (99)
T 2cpd_A 30 EMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMK 69 (99)
T ss_dssp HHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCcceEEEEEeCCeEEEEeCCHHHHHHHHH
Confidence 4578889999 888777663 334556688888888776
No 164
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=25.10 E-value=54 Score=26.20 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=28.6
Q ss_pred hHHHHHhhhhccccccccC----CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF----CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~----~~~~vvv~~pe~~~~vl~ 59 (411)
+-|.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 20 ~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 20 DRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp HHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 4588999999999888764 445677788888887765
No 165
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.05 E-value=32 Score=23.63 Aligned_cols=38 Identities=16% Similarity=0.046 Sum_probs=27.2
Q ss_pred hHHHHHhhhhccccccccCCC---------CeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFCS---------PAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~~---------~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+... -+|...+++.++.++..
T Consensus 30 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 30 TDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp HHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 457788889999887766321 24566888888887763
No 166
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.01 E-value=32 Score=22.55 Aligned_cols=37 Identities=11% Similarity=0.089 Sum_probs=25.3
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 20 ~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 20 QDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp HHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 45778888999987776522 12455677887777765
No 167
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.01 E-value=49 Score=23.00 Aligned_cols=38 Identities=18% Similarity=0.317 Sum_probs=27.2
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|...+++.+..++..
T Consensus 40 ~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 40 QLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp HHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4578888999998877763 3345566788888877743
No 168
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=24.84 E-value=41 Score=23.79 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=26.8
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+||+|..+.+.. .-+|...+.+.++.++..
T Consensus 55 ~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 55 TDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp HHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 45788889999987776632 124556788888877753
No 169
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=23.99 E-value=55 Score=22.73 Aligned_cols=37 Identities=8% Similarity=-0.074 Sum_probs=26.6
Q ss_pred hHHHHHhhhhccccccccC---CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---~~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||.|..+.+. |.-+|-..+.+.++.++.
T Consensus 36 ~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~ 75 (100)
T 3r27_A 36 ADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVN 75 (100)
T ss_dssp HHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4578899999998777653 344566678887777664
No 170
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=23.75 E-value=55 Score=22.24 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=24.4
Q ss_pred hHHHHHhhhhccccccccCC-C--CeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC-S--PAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~-~--~~vvv~~pe~~~~vl~ 59 (411)
+-+.++..+||.|..+.+.. . -+|...+.+.+..++.
T Consensus 42 ~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~ 81 (101)
T 2la4_A 42 ADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIV 81 (101)
T ss_dssp HHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 45778888999987776632 2 2344467777776664
No 171
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=23.71 E-value=61 Score=23.62 Aligned_cols=37 Identities=8% Similarity=-0.042 Sum_probs=26.4
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~ 59 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 78 ~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 123 (140)
T 2ku7_A 78 KVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 123 (140)
T ss_dssp HHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 45788889999987776632 22455678888888775
No 172
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.57 E-value=39 Score=22.63 Aligned_cols=38 Identities=11% Similarity=-0.010 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccC-----C----CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF-----C----SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~-----~----~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. + .-+|...+++.++.++..
T Consensus 30 ~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 30 RDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp HHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 4578888999998777663 1 124555788888877753
No 173
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.13 E-value=39 Score=23.14 Aligned_cols=37 Identities=19% Similarity=0.071 Sum_probs=26.5
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 23 ~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 68 (104)
T 1p1t_A 23 EQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68 (104)
T ss_dssp HHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 4578888999998777663 223455678888888775
No 174
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=23.10 E-value=42 Score=23.15 Aligned_cols=38 Identities=8% Similarity=0.085 Sum_probs=25.8
Q ss_pred hHHHHHhhhhccccccccC--------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF--------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~--------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 44 ~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 44 ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp HHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4578888899998776653 1224555778888777753
No 175
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.86 E-value=59 Score=21.68 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=26.7
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++.
T Consensus 20 ~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (95)
T 2dnz_A 20 DMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 65 (95)
T ss_dssp HHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 45788899999987776632 22455678888888776
No 176
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=22.85 E-value=41 Score=21.80 Aligned_cols=38 Identities=5% Similarity=0.048 Sum_probs=26.4
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 16 ~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 16 ETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp HHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 45778889999987776531 135666788888877753
No 177
>2cpy_A RNA-binding protein 12; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.75 E-value=69 Score=22.49 Aligned_cols=43 Identities=7% Similarity=-0.177 Sum_probs=29.2
Q ss_pred hHHHHHhhhhccc-cccccC--------CCCeEEecChhhhHHHHhcCCccc
Q 039939 23 SFLQQHCSIYGQV-FKSHLF--------CSPAIVSCDHELNMFILQNEEKYF 65 (411)
Q Consensus 23 ~~l~~~~~~yG~v-~~~~~~--------~~~~vvv~~pe~~~~vl~~~~~~~ 65 (411)
.-|.++..+||.| ..+.+. |.-+|...+.+.++.++..+...+
T Consensus 30 ~~l~~~F~~~g~v~~~v~i~~d~~g~~~G~afV~F~~~~~a~~Al~~~~~~~ 81 (114)
T 2cpy_A 30 MDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKL 81 (114)
T ss_dssp HHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGGGCSEEE
T ss_pred HHHHHHHHhCCCcCCeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCCCcc
Confidence 4578888999988 445442 334566688999998887644333
No 178
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=22.27 E-value=45 Score=25.47 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=27.1
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+. |.-+|...+++.++.++..
T Consensus 87 ~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 87 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp HHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 4578889999998777663 2234566788888877753
No 179
>2lea_A Serine/arginine-rich splicing factor 2; SR protein, RNA binding protein; NMR {Homo sapiens} PDB: 2leb_A 2lec_A
Probab=21.51 E-value=87 Score=22.88 Aligned_cols=39 Identities=13% Similarity=-0.024 Sum_probs=28.7
Q ss_pred hhHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 22 GSFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
..-|.++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 61 e~~L~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~F~~~~~A~~Ai~~ 108 (135)
T 2lea_A 61 PDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 108 (135)
T ss_dssp HHHHHHHHGGGSCCSEEECCCCSSSSSCCSCCEEECSCHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345788889999988777642 245667888888888864
No 180
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=21.25 E-value=83 Score=23.55 Aligned_cols=38 Identities=11% Similarity=0.016 Sum_probs=28.7
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++.+
T Consensus 18 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 64 (167)
T 2cjk_A 18 DNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 64 (167)
T ss_dssp HHHHHHHTTTCCEEEEECCCCTTTSSCCSCEEEEESSTHHHHHHHHS
T ss_pred HHHHHHHHhCCCEEEEEEEECCCCCCccceEEEEEccHHHHHHHHhc
Confidence 4578889999998877763 2345667889999888874
No 181
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=21.25 E-value=43 Score=23.39 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=26.1
Q ss_pred hHHHHHhhhhccccccccC---------CCCeEEecChhhhHHHHh
Q 039939 23 SFLQQHCSIYGQVFKSHLF---------CSPAIVSCDHELNMFILQ 59 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~---------~~~~vvv~~pe~~~~vl~ 59 (411)
.-+.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 41 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 41 DMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp HHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 4578888999998777653 123456678888887775
No 182
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.86 E-value=47 Score=22.74 Aligned_cols=38 Identities=11% Similarity=-0.024 Sum_probs=26.9
Q ss_pred hHHHHHhhh-hccccccccC--------CCCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSI-YGQVFKSHLF--------CSPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~-yG~v~~~~~~--------~~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+ ||+|..+.+. |.-+|...+++.++.++..
T Consensus 24 ~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 24 GMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp HHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 457788888 9998777652 1235666888888888763
No 183
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=20.85 E-value=49 Score=25.51 Aligned_cols=39 Identities=21% Similarity=0.143 Sum_probs=28.0
Q ss_pred hhHHHHHhhhhccccccccCC-----CCeEEecChhhhHHHHhc
Q 039939 22 GSFLQQHCSIYGQVFKSHLFC-----SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~~-----~~~vvv~~pe~~~~vl~~ 60 (411)
.+.|.++..+||.|-.+.+.. .-+|-..+.+.++..+..
T Consensus 60 ed~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 60 LDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp HHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 356889999999988877642 235666788877776653
No 184
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=20.74 E-value=82 Score=21.00 Aligned_cols=38 Identities=8% Similarity=-0.052 Sum_probs=26.5
Q ss_pred hHHHHHhhhhc-cccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYG-QVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG-~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
+-|.++..+|| +|..+++.- .-+|-..+++.++.++..
T Consensus 16 ~~l~~~F~~~G~~v~~v~i~~d~~t~~~rg~aFV~F~~~~~A~~Ai~~ 63 (91)
T 2lxi_A 16 DDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEA 63 (91)
T ss_dssp HHHHHHHHHHTCCCSBCCSSSCSSSCCCSSEEEEECSSHHHHHHHHHT
T ss_pred HHHHHHHHHhCCEeEEEEEEecCCCCCcCceEEEEecCHHHHHHHHHh
Confidence 45788889999 676666531 124666888888888754
No 185
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.44 E-value=67 Score=21.90 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=27.6
Q ss_pred hHHHHHhhhhccccccccCC---------CCeEEecChhhhHHHHhc
Q 039939 23 SFLQQHCSIYGQVFKSHLFC---------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 23 ~~l~~~~~~yG~v~~~~~~~---------~~~vvv~~pe~~~~vl~~ 60 (411)
.-|.++..+||+|..+.+.. .-+|...+++.++.++.+
T Consensus 30 ~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (103)
T 2cqg_A 30 QDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ 76 (103)
T ss_dssp HHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS
T ss_pred HHHHHHHHhcCCeEEEEEEecCCCCCccceEEEEECCHHHHHHHHHc
Confidence 45788899999987776522 134556788888888874
No 186
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=20.02 E-value=43 Score=24.67 Aligned_cols=38 Identities=21% Similarity=0.139 Sum_probs=27.4
Q ss_pred hhHHHHHhhhhccccccccCC-----CCeEEecChhhhHHHHh
Q 039939 22 GSFLQQHCSIYGQVFKSHLFC-----SPAIVSCDHELNMFILQ 59 (411)
Q Consensus 22 ~~~l~~~~~~yG~v~~~~~~~-----~~~vvv~~pe~~~~vl~ 59 (411)
.+-|.++..+||.|..+.+.. .-+|...+++.++..+.
T Consensus 42 e~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 42 LDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp HHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 356889999999988877643 24566678777777664
No 187
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.00 E-value=30 Score=24.34 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=24.2
Q ss_pred HHhhhhccccccccCC------------CCeEEecChhhhHHHHhc
Q 039939 27 QHCSIYGQVFKSHLFC------------SPAIVSCDHELNMFILQN 60 (411)
Q Consensus 27 ~~~~~yG~v~~~~~~~------------~~~vvv~~pe~~~~vl~~ 60 (411)
++..+||+|..+.+.. .-+|...+++.++.++..
T Consensus 37 ~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 37 EYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp TTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred HHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 7888999987776632 234555788888887764
Done!