Query 039943
Match_columns 581
No_of_seqs 205 out of 2279
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 03:33:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039943.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039943hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 2.4E-43 5.2E-48 379.9 39.0 534 21-566 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 4.8E-38 1.1E-42 322.3 30.4 461 17-562 12-492 (498)
3 PRK10207 dipeptide/tripeptide 100.0 3.9E-36 8.5E-41 324.1 38.2 462 21-563 9-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 2.8E-35 6E-40 317.2 37.2 452 21-561 5-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 4.6E-34 1E-38 303.7 37.9 448 22-549 5-469 (493)
6 PRK09584 tppB putative tripept 100.0 1E-32 2.2E-37 299.0 38.9 458 23-563 18-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 5.5E-26 1.2E-30 249.9 39.7 333 40-432 1-341 (654)
8 PRK14995 methyl viologen resis 99.9 1.4E-23 3E-28 228.2 37.0 178 26-234 6-183 (495)
9 PRK03545 putative arabinose tr 99.9 8E-24 1.7E-28 223.1 33.0 173 25-229 8-180 (390)
10 PRK05122 major facilitator sup 99.9 2E-23 4.3E-28 220.7 35.0 376 25-558 14-390 (399)
11 COG2814 AraJ Arabinose efflux 99.9 2.7E-23 5.9E-28 211.9 33.8 181 22-234 9-189 (394)
12 PRK11551 putative 3-hydroxyphe 99.9 2E-23 4.3E-28 221.2 33.7 175 22-228 11-185 (406)
13 PRK10504 putative transporter; 99.9 4.1E-23 8.9E-28 223.3 35.7 177 26-234 10-186 (471)
14 PRK11646 multidrug resistance 99.9 2.5E-23 5.4E-28 220.0 33.1 168 29-228 13-180 (400)
15 TIGR01299 synapt_SV2 synaptic 99.9 2.3E-23 5E-28 231.9 34.2 156 45-231 185-353 (742)
16 PRK10077 xylE D-xylose transpo 99.9 2E-23 4.4E-28 226.1 33.0 411 58-576 51-476 (479)
17 PRK12382 putative transporter; 99.9 3.9E-23 8.5E-28 218.0 34.2 373 26-557 15-389 (392)
18 PRK11663 regulatory protein Uh 99.9 2.7E-23 5.9E-28 222.2 32.0 165 30-226 27-191 (434)
19 PRK10054 putative transporter; 99.9 5.6E-23 1.2E-27 216.9 33.7 174 25-230 6-179 (395)
20 PRK10489 enterobactin exporter 99.9 3.8E-23 8.3E-28 220.0 32.4 387 29-569 20-411 (417)
21 TIGR00887 2A0109 phosphate:H+ 99.9 1.2E-22 2.6E-27 221.4 35.6 180 24-229 14-221 (502)
22 TIGR00903 2A0129 major facilit 99.9 6.2E-23 1.4E-27 214.0 31.0 153 46-231 10-163 (368)
23 COG2271 UhpC Sugar phosphate p 99.9 5.4E-24 1.2E-28 214.0 20.5 176 26-232 25-205 (448)
24 PRK10213 nepI ribonucleoside t 99.9 4.5E-22 9.7E-27 210.0 35.6 176 20-227 14-189 (394)
25 TIGR00893 2A0114 d-galactonate 99.9 1.2E-22 2.7E-27 212.7 30.6 155 46-231 13-167 (399)
26 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.1E-22 4.5E-27 213.8 31.8 177 24-232 6-188 (412)
27 PRK10642 proline/glycine betai 99.9 2.9E-22 6.2E-27 217.7 33.4 176 26-225 16-205 (490)
28 PRK09874 drug efflux system pr 99.9 1.7E-22 3.6E-27 214.0 30.3 379 27-559 15-400 (408)
29 PRK09556 uhpT sugar phosphate 99.9 3.9E-23 8.4E-28 223.2 25.3 158 48-231 50-210 (467)
30 TIGR00879 SP MFS transporter, 99.9 2.8E-22 6.2E-27 215.8 31.6 152 51-230 52-214 (481)
31 PRK09705 cynX putative cyanate 99.9 3.5E-22 7.5E-27 210.9 31.3 151 43-226 26-177 (393)
32 TIGR00899 2A0120 sugar efflux 99.9 7.8E-22 1.7E-26 206.3 33.5 171 32-231 3-174 (375)
33 PRK15402 multidrug efflux syst 99.9 1.4E-21 3E-26 207.2 35.7 158 41-230 28-185 (406)
34 PRK11273 glpT sn-glycerol-3-ph 99.9 4.2E-22 9.1E-27 214.2 31.5 157 47-231 49-206 (452)
35 PRK10406 alpha-ketoglutarate t 99.9 1.1E-21 2.3E-26 209.9 33.6 173 29-225 25-211 (432)
36 TIGR00900 2A0121 H+ Antiporter 99.9 4.7E-22 1E-26 206.5 29.6 353 31-515 4-362 (365)
37 TIGR00892 2A0113 monocarboxyla 99.9 5.1E-22 1.1E-26 213.5 28.5 149 51-231 43-192 (455)
38 PRK12307 putative sialic acid 99.9 5E-22 1.1E-26 211.9 28.2 166 24-221 16-181 (426)
39 PRK10091 MFS transport protein 99.9 4.9E-21 1.1E-25 201.3 35.3 173 26-230 3-175 (382)
40 PRK09952 shikimate transporter 99.9 2.5E-21 5.4E-26 207.3 33.4 177 24-224 20-211 (438)
41 TIGR00890 2A0111 Oxalate/Forma 99.9 4.4E-22 9.5E-27 207.6 26.5 152 47-230 23-174 (377)
42 TIGR00711 efflux_EmrB drug res 99.9 1.4E-21 3.1E-26 211.8 31.1 173 28-232 4-176 (485)
43 TIGR00891 2A0112 putative sial 99.9 1.3E-21 2.8E-26 206.5 29.4 173 22-226 8-182 (405)
44 PRK03893 putative sialic acid 99.9 1.9E-21 4.2E-26 211.6 31.6 169 23-223 17-185 (496)
45 TIGR00894 2A0114euk Na(+)-depe 99.9 2.6E-21 5.6E-26 208.9 31.7 147 56-231 70-217 (465)
46 PF07690 MFS_1: Major Facilita 99.9 4.8E-22 1.1E-26 205.5 24.8 166 32-228 2-167 (352)
47 PLN00028 nitrate transmembrane 99.9 3.7E-21 8E-26 208.0 32.4 173 26-231 36-217 (476)
48 TIGR00710 efflux_Bcr_CflA drug 99.9 1.7E-20 3.7E-25 196.8 36.4 175 25-231 4-178 (385)
49 KOG1330 Sugar transporter/spin 99.9 1.9E-22 4.1E-27 204.7 20.3 180 22-233 29-209 (493)
50 PRK11195 lysophospholipid tran 99.9 1.2E-20 2.6E-25 199.1 34.9 164 27-226 4-167 (393)
51 cd06174 MFS The Major Facilita 99.9 3.5E-21 7.6E-26 198.5 30.1 346 30-555 3-350 (352)
52 PRK03699 putative transporter; 99.9 6.1E-21 1.3E-25 201.5 32.2 173 24-228 5-178 (394)
53 TIGR00898 2A0119 cation transp 99.9 3.1E-21 6.8E-26 210.5 29.9 147 51-231 113-262 (505)
54 PRK03633 putative MFS family t 99.9 1.4E-20 3E-25 197.9 33.3 156 25-212 5-160 (381)
55 PRK15011 sugar efflux transpor 99.9 1.8E-20 3.8E-25 197.9 33.4 174 28-231 17-192 (393)
56 TIGR00897 2A0118 polyol permea 99.9 4.1E-20 8.8E-25 195.7 36.0 170 23-220 10-180 (402)
57 PRK15403 multidrug efflux syst 99.9 9.6E-20 2.1E-24 193.4 37.3 148 52-230 41-188 (413)
58 TIGR00895 2A0115 benzoate tran 99.9 1.2E-20 2.6E-25 198.4 30.2 172 25-228 16-187 (398)
59 TIGR00712 glpT glycerol-3-phos 99.9 5.5E-21 1.2E-25 204.7 27.4 156 48-231 48-204 (438)
60 PRK15075 citrate-proton sympor 99.9 2.7E-20 5.8E-25 199.2 32.3 172 25-220 14-199 (434)
61 KOG0254 Predicted transporter 99.9 2.7E-20 5.8E-25 203.2 31.2 424 44-574 64-500 (513)
62 PRK11652 emrD multidrug resist 99.9 9.8E-20 2.1E-24 192.2 34.5 174 23-228 5-178 (394)
63 PRK11043 putative transporter; 99.9 6.4E-20 1.4E-24 194.1 32.7 162 38-230 15-178 (401)
64 TIGR00902 2A0127 phenyl propri 99.9 1.5E-19 3.2E-24 190.2 34.9 364 29-552 7-374 (382)
65 PRK09528 lacY galactoside perm 99.9 2.2E-20 4.8E-25 199.0 28.5 394 26-559 10-405 (420)
66 TIGR00881 2A0104 phosphoglycer 99.9 7.9E-21 1.7E-25 198.2 23.4 154 47-231 15-169 (379)
67 KOG0569 Permease of the major 99.9 3.2E-20 6.9E-25 195.0 26.4 395 65-570 63-467 (485)
68 PRK11102 bicyclomycin/multidru 99.9 2E-19 4.2E-24 188.5 32.2 154 45-230 10-163 (377)
69 KOG2532 Permease of the major 99.9 1.3E-20 2.8E-25 200.1 23.2 379 55-558 66-448 (466)
70 PRK10473 multidrug efflux syst 99.9 7.9E-19 1.7E-23 185.2 36.5 171 29-231 6-176 (392)
71 TIGR00792 gph sugar (Glycoside 99.9 3.7E-19 7.9E-24 190.4 31.6 172 37-231 10-192 (437)
72 TIGR00889 2A0110 nucleoside tr 99.9 5.5E-19 1.2E-23 187.9 32.6 396 30-560 6-405 (418)
73 TIGR00882 2A0105 oligosacchari 99.9 5E-19 1.1E-23 187.0 31.2 385 27-554 3-392 (396)
74 PRK15034 nitrate/nitrite trans 99.9 1E-18 2.2E-23 184.5 32.7 179 26-232 34-231 (462)
75 PRK10133 L-fucose transporter; 99.9 1.2E-18 2.6E-23 186.2 33.8 148 27-206 27-177 (438)
76 PRK11010 ampG muropeptide tran 99.9 3.7E-18 8.1E-23 185.1 36.8 175 25-230 11-192 (491)
77 PRK08633 2-acyl-glycerophospho 99.8 1.4E-18 2.9E-23 208.1 35.0 155 26-208 9-165 (1146)
78 PF05977 MFS_3: Transmembrane 99.8 6.3E-18 1.4E-22 182.6 36.4 381 27-555 11-392 (524)
79 PF00854 PTR2: POT family; In 99.8 5.8E-21 1.3E-25 199.9 11.7 362 93-498 1-368 (372)
80 PRK06814 acylglycerophosphoeth 99.8 1.9E-18 4.1E-23 206.5 32.5 159 39-228 28-190 (1140)
81 TIGR00883 2A0106 metabolite-pr 99.8 9.4E-19 2E-23 183.5 26.2 156 49-227 15-185 (394)
82 PRK11128 putative 3-phenylprop 99.8 8.5E-18 1.8E-22 176.7 32.4 156 35-226 13-172 (382)
83 COG2223 NarK Nitrate/nitrite t 99.8 2.2E-18 4.7E-23 174.1 26.4 182 24-236 12-196 (417)
84 PRK11902 ampG muropeptide tran 99.8 2.1E-17 4.5E-22 175.0 35.4 164 34-228 7-177 (402)
85 TIGR00886 2A0108 nitrite extru 99.8 1.6E-18 3.4E-23 180.8 25.4 164 28-222 3-177 (366)
86 TIGR00896 CynX cyanate transpo 99.8 6.8E-18 1.5E-22 175.6 25.2 145 47-224 20-166 (355)
87 TIGR01301 GPH_sucrose GPH fami 99.8 1.1E-16 2.3E-21 170.3 33.7 445 28-561 6-475 (477)
88 TIGR00885 fucP L-fucose:H+ sym 99.8 1.1E-16 2.3E-21 169.8 32.9 169 30-227 7-201 (410)
89 TIGR00901 2A0125 AmpG-related 99.8 2.9E-17 6.3E-22 170.9 26.7 157 45-230 6-175 (356)
90 TIGR00806 rfc RFC reduced fola 99.8 3.2E-17 7E-22 170.1 25.8 154 45-231 44-201 (511)
91 KOG0252 Inorganic phosphate tr 99.8 3.6E-18 7.7E-23 172.9 17.2 406 59-572 81-512 (538)
92 PF03825 Nuc_H_symport: Nucleo 99.8 6.8E-16 1.5E-20 162.0 31.5 384 31-559 7-397 (400)
93 PF00083 Sugar_tr: Sugar (and 99.8 1.4E-21 3E-26 210.1 -13.3 397 62-571 46-450 (451)
94 PRK09848 glucuronide transport 99.8 1E-15 2.2E-20 164.5 31.1 151 33-205 15-174 (448)
95 PF06609 TRI12: Fungal trichot 99.7 4.8E-15 1E-19 159.9 34.9 149 47-228 64-212 (599)
96 PRK09669 putative symporter Ya 99.7 2.4E-15 5.2E-20 161.4 32.6 174 33-229 16-200 (444)
97 PRK10429 melibiose:sodium symp 99.7 2.5E-15 5.4E-20 162.6 32.2 173 33-229 13-197 (473)
98 PTZ00207 hypothetical protein; 99.7 1.7E-14 3.8E-19 156.6 37.0 157 43-229 44-201 (591)
99 KOG0255 Synaptic vesicle trans 99.7 3.4E-15 7.3E-20 163.6 31.6 140 55-228 111-250 (521)
100 KOG2504 Monocarboxylate transp 99.7 5.8E-16 1.3E-20 166.6 24.0 434 29-564 45-483 (509)
101 TIGR00805 oat sodium-independe 99.7 2.6E-16 5.7E-21 174.8 21.7 200 25-232 31-280 (633)
102 TIGR02718 sider_RhtX_FptX side 99.7 1.9E-14 4.1E-19 151.7 32.5 176 28-231 3-182 (390)
103 TIGR00788 fbt folate/biopterin 99.7 9.1E-15 2E-19 157.5 30.1 386 22-517 21-414 (468)
104 COG0738 FucP Fucose permease [ 99.7 8.8E-15 1.9E-19 147.1 27.2 136 44-207 30-165 (422)
105 KOG2615 Permease of the major 99.7 7.1E-16 1.5E-20 152.9 19.0 119 57-207 63-181 (451)
106 PF13347 MFS_2: MFS/sugar tran 99.7 4.4E-15 9.4E-20 158.6 24.5 356 36-518 11-386 (428)
107 KOG3764 Vesicular amine transp 99.7 2.4E-15 5.3E-20 150.0 20.3 148 56-233 100-247 (464)
108 KOG0253 Synaptic vesicle trans 99.7 4.5E-14 9.8E-19 139.2 25.8 154 45-231 96-249 (528)
109 PF01306 LacY_symp: LacY proto 99.7 3.1E-14 6.8E-19 147.2 24.8 389 26-559 7-402 (412)
110 PRK11462 putative transporter; 99.7 2.2E-13 4.9E-18 146.6 32.6 173 33-228 16-199 (460)
111 COG2807 CynX Cyanate permease 99.6 4.4E-13 9.5E-18 133.1 28.5 350 48-558 33-386 (395)
112 KOG2533 Permease of the major 99.6 2.3E-13 5E-18 145.2 27.1 151 54-235 73-229 (495)
113 COG2211 MelB Na+/melibiose sym 99.6 1.4E-12 3E-17 136.3 30.8 362 29-517 15-397 (467)
114 PRK15011 sugar efflux transpor 99.5 5.8E-13 1.2E-17 140.6 20.5 176 23-230 213-388 (393)
115 PRK10642 proline/glycine betai 99.5 1.1E-12 2.4E-17 142.6 19.8 178 25-231 249-428 (490)
116 PRK09556 uhpT sugar phosphate 99.5 9.7E-13 2.1E-17 142.2 18.2 176 27-231 259-447 (467)
117 PF11700 ATG22: Vacuole efflux 99.5 1.8E-10 4E-15 123.4 35.2 90 455-559 381-470 (477)
118 PRK03699 putative transporter; 99.5 2.6E-12 5.7E-17 135.6 18.6 172 27-230 206-377 (394)
119 PRK05122 major facilitator sup 99.4 2.8E-12 6.1E-17 135.5 18.3 166 36-235 226-391 (399)
120 TIGR00899 2A0120 sugar efflux 99.4 6.4E-12 1.4E-16 131.3 19.8 164 35-230 208-371 (375)
121 PRK09952 shikimate transporter 99.4 4.9E-12 1.1E-16 135.5 18.6 181 25-232 249-432 (438)
122 TIGR00890 2A0111 Oxalate/Forma 99.4 2.8E-12 6E-17 133.6 16.4 169 28-226 207-375 (377)
123 PF03209 PUCC: PUCC protein; 99.4 5.1E-10 1.1E-14 114.2 31.8 376 54-556 7-397 (403)
124 COG2271 UhpC Sugar phosphate p 99.4 2.4E-12 5.1E-17 130.5 14.6 179 26-232 252-433 (448)
125 TIGR01299 synapt_SV2 synaptic 99.4 5.6E-12 1.2E-16 141.2 18.7 135 66-232 599-733 (742)
126 cd06174 MFS The Major Facilita 99.4 8.5E-12 1.9E-16 128.3 18.6 170 29-229 178-348 (352)
127 PRK09874 drug efflux system pr 99.4 5.1E-12 1.1E-16 133.8 17.1 166 35-231 228-396 (408)
128 PRK09705 cynX putative cyanate 99.4 2E-11 4.3E-16 129.0 21.4 176 27-234 206-382 (393)
129 PRK12382 putative transporter; 99.4 1.3E-11 2.8E-16 130.2 18.1 162 36-231 226-387 (392)
130 TIGR00889 2A0110 nucleoside tr 99.4 1.4E-11 2.9E-16 131.2 18.0 175 31-233 213-402 (418)
131 PRK03545 putative arabinose tr 99.4 3.9E-11 8.4E-16 126.5 21.0 172 29-233 208-380 (390)
132 TIGR00883 2A0106 metabolite-pr 99.4 3.4E-12 7.5E-17 133.7 12.8 168 27-223 220-391 (394)
133 PRK10489 enterobactin exporter 99.4 2.1E-11 4.5E-16 129.8 18.8 160 42-232 239-398 (417)
134 PRK03893 putative sialic acid 99.4 2.9E-11 6.3E-16 131.6 19.6 149 44-221 293-441 (496)
135 TIGR00880 2_A_01_02 Multidrug 99.4 4.4E-12 9.6E-17 112.1 10.7 133 68-231 4-136 (141)
136 PRK11663 regulatory protein Uh 99.4 2.5E-11 5.5E-16 129.9 18.3 175 28-231 245-422 (434)
137 KOG4686 Predicted sugar transp 99.3 6.8E-12 1.5E-16 119.7 11.8 134 49-209 66-199 (459)
138 PRK11551 putative 3-hydroxyphe 99.3 3.3E-11 7.2E-16 127.6 18.4 167 32-230 226-393 (406)
139 PRK09528 lacY galactoside perm 99.3 1.4E-11 3.1E-16 131.2 14.7 158 42-230 239-400 (420)
140 TIGR00893 2A0114 d-galactonate 99.3 4E-11 8.7E-16 125.4 17.8 176 27-230 216-396 (399)
141 PRK11273 glpT sn-glycerol-3-ph 99.3 3.9E-11 8.5E-16 129.1 17.6 175 27-230 254-432 (452)
142 TIGR00902 2A0127 phenyl propri 99.3 8.5E-11 1.8E-15 123.6 19.4 169 26-228 205-374 (382)
143 TIGR00891 2A0112 putative sial 99.3 4.1E-11 9E-16 126.3 16.0 154 33-217 245-400 (405)
144 TIGR00892 2A0113 monocarboxyla 99.3 5.1E-11 1.1E-15 128.3 16.9 172 27-229 242-417 (455)
145 PRK03633 putative MFS family t 99.3 1.1E-10 2.5E-15 122.6 19.2 158 37-229 211-368 (381)
146 KOG2563 Permease of the major 99.3 7.2E-10 1.6E-14 113.3 23.1 134 49-208 67-202 (480)
147 COG2814 AraJ Arabinose efflux 99.3 1.7E-10 3.7E-15 118.4 18.5 176 26-233 211-386 (394)
148 PF11700 ATG22: Vacuole efflux 99.3 2.4E-10 5.2E-15 122.5 19.7 183 24-231 279-466 (477)
149 TIGR00897 2A0118 polyol permea 99.3 2.5E-10 5.5E-15 120.9 19.5 174 27-229 223-397 (402)
150 PRK11010 ampG muropeptide tran 99.3 2.6E-10 5.6E-15 123.9 19.2 177 29-232 225-402 (491)
151 KOG2325 Predicted transporter/ 99.2 1.5E-10 3.3E-15 121.4 16.4 185 20-232 28-228 (488)
152 PRK15075 citrate-proton sympor 99.2 1.8E-10 3.8E-15 123.4 17.5 152 33-212 245-398 (434)
153 COG2223 NarK Nitrate/nitrite t 99.2 1.3E-10 2.9E-15 118.0 15.0 183 25-232 217-400 (417)
154 PF03092 BT1: BT1 family; Int 99.2 1.3E-09 2.8E-14 116.2 23.0 159 49-232 12-174 (433)
155 TIGR00879 SP MFS transporter, 99.2 3.1E-10 6.7E-15 122.0 18.4 166 45-232 303-469 (481)
156 PRK10406 alpha-ketoglutarate t 99.2 4.5E-10 9.7E-15 120.2 18.8 167 37-231 254-422 (432)
157 COG2270 Permeases of the major 99.2 2.1E-09 4.5E-14 109.5 21.6 368 45-556 34-428 (438)
158 PRK11128 putative 3-phenylprop 99.2 1.1E-09 2.3E-14 115.3 20.1 166 27-226 206-372 (382)
159 TIGR01272 gluP glucose/galacto 99.2 6.9E-10 1.5E-14 113.1 17.4 160 28-221 142-303 (310)
160 KOG2816 Predicted transporter 99.2 2.7E-09 5.8E-14 113.4 22.0 353 33-518 28-394 (463)
161 TIGR00900 2A0121 H+ Antiporter 99.2 6E-10 1.3E-14 115.5 16.5 154 27-210 211-365 (365)
162 PRK10091 MFS transport protein 99.2 1.1E-09 2.3E-14 115.3 18.2 170 29-229 202-372 (382)
163 TIGR00712 glpT glycerol-3-phos 99.2 6.5E-10 1.4E-14 119.1 16.5 178 27-233 252-433 (438)
164 TIGR02332 HpaX 4-hydroxyphenyl 99.2 6.5E-10 1.4E-14 118.1 16.3 164 28-222 244-410 (412)
165 PRK10504 putative transporter; 99.1 1.6E-09 3.4E-14 117.2 18.5 156 28-211 263-418 (471)
166 KOG4686 Predicted sugar transp 99.1 1.4E-09 3E-14 104.1 15.4 156 22-210 260-416 (459)
167 PLN00028 nitrate transmembrane 99.1 8.2E-10 1.8E-14 119.6 15.8 172 29-233 255-433 (476)
168 TIGR00896 CynX cyanate transpo 99.1 1.4E-09 3.1E-14 113.0 17.0 152 27-210 198-350 (355)
169 PRK12307 putative sialic acid 99.1 2E-09 4.3E-14 114.8 18.4 146 42-217 247-392 (426)
170 TIGR00881 2A0104 phosphoglycer 99.1 5.6E-10 1.2E-14 116.2 13.7 161 27-215 217-379 (379)
171 TIGR00882 2A0105 oligosacchari 99.1 1.5E-09 3.3E-14 114.7 16.8 169 29-228 218-390 (396)
172 TIGR01272 gluP glucose/galacto 99.1 1.1E-08 2.4E-13 104.2 22.5 85 136-227 7-107 (310)
173 KOG3626 Organic anion transpor 99.1 2.4E-08 5.2E-13 109.2 26.0 197 33-238 104-348 (735)
174 TIGR00792 gph sugar (Glycoside 99.1 9.5E-10 2E-14 117.6 15.1 163 26-212 222-384 (437)
175 PF05977 MFS_3: Transmembrane 99.1 3.4E-09 7.4E-14 115.0 19.1 171 29-230 221-391 (524)
176 PRK10077 xylE D-xylose transpo 99.1 5.8E-09 1.3E-13 113.0 20.9 154 51-231 295-455 (479)
177 TIGR02718 sider_RhtX_FptX side 99.1 3.3E-09 7.2E-14 111.8 18.2 175 28-227 210-385 (390)
178 PRK10213 nepI ribonucleoside t 99.1 6.5E-09 1.4E-13 109.8 19.5 166 28-226 218-384 (394)
179 PRK15402 multidrug efflux syst 99.1 6.7E-09 1.4E-13 110.1 19.7 171 28-225 217-387 (406)
180 PRK10054 putative transporter; 99.1 2E-09 4.4E-14 113.7 15.4 173 27-230 207-381 (395)
181 TIGR00895 2A0115 benzoate tran 99.1 3E-09 6.5E-14 111.6 15.7 145 29-205 253-397 (398)
182 TIGR00711 efflux_EmrB drug res 99.0 3.7E-09 8E-14 114.6 15.9 154 28-208 257-410 (485)
183 PRK14995 methyl viologen resis 99.0 4.4E-09 9.5E-14 114.6 16.2 152 28-207 261-412 (495)
184 TIGR00887 2A0109 phosphate:H+ 99.0 4.9E-09 1.1E-13 114.4 16.5 166 35-228 297-484 (502)
185 TIGR00894 2A0114euk Na(+)-depe 99.0 8.2E-09 1.8E-13 111.5 17.4 177 26-231 261-448 (465)
186 PRK10133 L-fucose transporter; 99.0 9.1E-09 2E-13 110.2 17.1 166 29-228 261-428 (438)
187 PRK11902 ampG muropeptide tran 99.0 1.7E-08 3.6E-13 107.0 18.9 152 47-229 230-386 (402)
188 PRK08633 2-acyl-glycerophospho 99.0 1E-08 2.2E-13 123.3 18.6 163 28-221 234-398 (1146)
189 PF13347 MFS_2: MFS/sugar tran 99.0 1.2E-08 2.7E-13 108.9 16.8 164 26-212 225-388 (428)
190 PRK09848 glucuronide transport 99.0 7.5E-09 1.6E-13 111.3 15.2 164 26-211 228-391 (448)
191 TIGR00710 efflux_Bcr_CflA drug 99.0 2.5E-08 5.4E-13 104.4 18.8 161 28-216 208-369 (385)
192 COG2270 Permeases of the major 99.0 1E-08 2.2E-13 104.6 14.8 171 27-228 253-424 (438)
193 PRK11646 multidrug resistance 99.0 1.1E-08 2.5E-13 108.2 16.0 154 44-228 226-383 (400)
194 PF03137 OATP: Organic Anion T 99.0 7.4E-11 1.6E-15 128.3 -0.8 165 33-206 10-201 (539)
195 PRK15034 nitrate/nitrite trans 99.0 3.5E-08 7.6E-13 104.8 19.4 186 27-232 253-453 (462)
196 PRK06814 acylglycerophosphoeth 98.9 1.3E-08 2.9E-13 122.1 17.3 185 26-221 225-410 (1140)
197 PRK11195 lysophospholipid tran 98.9 4.9E-08 1.1E-12 103.1 19.3 159 39-229 218-376 (393)
198 KOG2504 Monocarboxylate transp 98.9 1.1E-08 2.3E-13 110.6 14.2 176 26-233 298-476 (509)
199 TIGR00903 2A0129 major facilit 98.9 4.7E-08 1E-12 102.1 17.6 166 26-229 192-361 (368)
200 PF05631 DUF791: Protein of un 98.9 1.5E-06 3.3E-11 87.6 27.5 149 55-230 62-213 (354)
201 TIGR00901 2A0125 AmpG-related 98.9 2.4E-08 5.1E-13 103.8 14.6 144 28-192 211-355 (356)
202 COG2807 CynX Cyanate permease 98.9 1.1E-07 2.3E-12 95.2 18.2 169 28-227 210-379 (395)
203 TIGR00898 2A0119 cation transp 98.9 2.7E-08 5.8E-13 108.7 14.9 133 68-231 361-493 (505)
204 PF07690 MFS_1: Major Facilita 98.9 1.5E-08 3.2E-13 104.5 11.8 141 31-199 211-352 (352)
205 PRK10473 multidrug efflux syst 98.9 7.3E-08 1.6E-12 101.6 17.2 141 44-220 221-361 (392)
206 PRK10429 melibiose:sodium symp 98.8 9.4E-08 2E-12 103.5 15.6 166 26-211 231-396 (473)
207 KOG0253 Synaptic vesicle trans 98.8 1.3E-07 2.7E-12 94.3 13.4 170 28-230 328-516 (528)
208 PRK09669 putative symporter Ya 98.7 1.8E-07 3.9E-12 100.5 15.5 129 62-212 264-392 (444)
209 PRK11102 bicyclomycin/multidru 98.7 7.3E-07 1.6E-11 93.3 18.9 147 29-203 197-344 (377)
210 PRK11043 putative transporter; 98.7 9.7E-07 2.1E-11 93.3 19.5 149 37-213 214-362 (401)
211 PF03825 Nuc_H_symport: Nucleo 98.7 6.8E-07 1.5E-11 94.1 17.9 178 28-231 209-393 (400)
212 TIGR00885 fucP L-fucose:H+ sym 98.6 7.7E-07 1.7E-11 94.5 16.8 164 28-225 234-404 (410)
213 KOG0569 Permease of the major 98.6 1.9E-06 4.2E-11 91.4 18.8 186 28-236 271-457 (485)
214 TIGR00886 2A0108 nitrite extru 98.6 2E-07 4.3E-12 97.0 11.4 139 28-194 227-365 (366)
215 PF01306 LacY_symp: LacY proto 98.6 1.3E-06 2.9E-11 90.9 16.7 175 26-231 220-398 (412)
216 KOG3762 Predicted transporter 98.6 3.3E-07 7.2E-12 95.8 11.6 125 394-563 428-553 (618)
217 COG2211 MelB Na+/melibiose sym 98.5 1.7E-06 3.7E-11 91.0 15.8 161 29-211 239-399 (467)
218 KOG2532 Permease of the major 98.5 1.2E-06 2.5E-11 93.8 14.4 176 27-232 259-446 (466)
219 PRK11652 emrD multidrug resist 98.5 4.4E-06 9.5E-11 88.1 18.4 138 46-212 227-364 (394)
220 TIGR00924 yjdL_sub1_fam amino 98.5 2.6E-06 5.6E-11 92.2 16.9 183 30-233 276-468 (475)
221 KOG3098 Uncharacterized conser 98.5 0.00013 2.9E-09 77.0 26.9 102 68-201 56-157 (461)
222 PRK11462 putative transporter; 98.4 1.6E-05 3.4E-10 85.8 20.0 128 62-211 263-390 (460)
223 PF03209 PUCC: PUCC protein; 98.4 1.5E-05 3.2E-10 81.9 17.1 165 38-229 220-394 (403)
224 COG0477 ProP Permeases of the 98.4 1.7E-05 3.7E-10 78.8 17.7 147 47-222 23-174 (338)
225 PRK15403 multidrug efflux syst 98.4 1.5E-05 3.3E-10 84.7 18.1 170 27-224 219-388 (413)
226 TIGR00880 2_A_01_02 Multidrug 98.3 9.5E-06 2.1E-10 71.1 12.9 120 394-558 20-139 (141)
227 PF06813 Nodulin-like: Nodulin 98.3 1.7E-05 3.7E-10 77.4 15.3 133 49-207 24-156 (250)
228 KOG3764 Vesicular amine transp 98.2 1.6E-06 3.5E-11 87.7 5.9 176 31-231 275-452 (464)
229 KOG0637 Sucrose transporter an 98.2 7.8E-06 1.7E-10 84.3 10.7 165 26-205 32-202 (498)
230 KOG1330 Sugar transporter/spin 98.2 4.5E-07 9.7E-12 93.5 1.3 148 372-567 72-219 (493)
231 TIGR00788 fbt folate/biopterin 98.2 4.7E-06 1E-10 90.1 9.3 145 54-220 280-430 (468)
232 PRK09584 tppB putative tripept 98.2 4.9E-05 1.1E-09 82.9 17.1 175 35-231 281-477 (500)
233 COG0738 FucP Fucose permease [ 98.2 2.9E-05 6.3E-10 79.1 14.0 138 45-216 255-392 (422)
234 TIGR01301 GPH_sucrose GPH fami 98.2 4E-05 8.7E-10 82.2 16.0 206 21-235 253-473 (477)
235 PF01770 Folate_carrier: Reduc 98.2 0.00046 1E-08 71.8 22.8 155 46-232 23-181 (412)
236 PRK10207 dipeptide/tripeptide 98.2 3.7E-05 8E-10 83.5 15.2 174 36-231 279-474 (489)
237 KOG2533 Permease of the major 98.1 1.7E-05 3.7E-10 85.2 10.5 164 28-220 275-443 (495)
238 KOG4332 Predicted sugar transp 98.0 0.00026 5.6E-09 68.0 16.4 151 51-228 61-215 (454)
239 KOG3762 Predicted transporter 98.0 4.8E-05 1E-09 80.0 10.8 158 45-234 390-548 (618)
240 PF12832 MFS_1_like: MFS_1 lik 98.0 5.3E-05 1.2E-09 59.6 8.4 65 36-102 10-74 (77)
241 KOG0254 Predicted transporter 97.9 0.00041 8.8E-09 76.0 16.9 184 24-227 292-476 (513)
242 PF00083 Sugar_tr: Sugar (and 97.9 1.7E-07 3.7E-12 100.7 -9.6 184 28-235 254-438 (451)
243 PF02487 CLN3: CLN3 protein; 97.8 0.01 2.2E-07 61.9 25.3 126 65-226 62-188 (402)
244 TIGR00769 AAA ADP/ATP carrier 97.7 0.057 1.2E-06 57.9 29.0 164 26-206 7-189 (472)
245 PTZ00207 hypothetical protein; 97.7 0.00034 7.4E-09 76.8 11.7 129 391-560 80-208 (591)
246 TIGR00806 rfc RFC reduced fola 97.6 0.0013 2.8E-08 69.6 15.0 124 390-557 80-203 (511)
247 KOG0252 Inorganic phosphate tr 97.6 9.7E-05 2.1E-09 76.4 5.5 179 27-232 305-497 (538)
248 PRK15462 dipeptide/tripeptide 97.5 0.00065 1.4E-08 73.3 11.6 122 392-557 65-189 (493)
249 TIGR00805 oat sodium-independe 97.5 0.00064 1.4E-08 76.2 11.6 106 454-559 172-283 (633)
250 PF06963 FPN1: Ferroportin1 (F 97.5 0.2 4.3E-06 53.2 29.3 192 28-230 4-197 (432)
251 PF06609 TRI12: Fungal trichot 97.3 0.0033 7.2E-08 68.9 14.3 152 25-205 309-464 (599)
252 KOG0255 Synaptic vesicle trans 97.3 0.0015 3.2E-08 71.8 11.1 126 388-562 134-259 (521)
253 PF06779 DUF1228: Protein of u 97.3 0.0025 5.4E-08 50.8 8.9 65 49-114 14-78 (85)
254 KOG2615 Permease of the major 97.2 0.0053 1.2E-07 62.4 12.7 124 54-208 289-414 (451)
255 PF05978 UNC-93: Ion channel r 97.1 0.029 6.2E-07 50.7 14.9 114 59-204 34-147 (156)
256 KOG2816 Predicted transporter 96.8 0.0095 2.1E-07 63.8 10.9 127 48-206 263-390 (463)
257 PRK03612 spermidine synthase; 96.5 0.18 3.8E-06 55.2 18.5 144 51-222 39-186 (521)
258 KOG2563 Permease of the major 96.4 0.017 3.7E-07 60.1 9.8 175 33-236 273-453 (480)
259 KOG3626 Organic anion transpor 96.2 0.041 9E-07 61.2 11.6 173 29-208 395-649 (735)
260 KOG2325 Predicted transporter/ 96.1 0.058 1.2E-06 57.5 12.1 136 407-564 100-236 (488)
261 KOG3574 Acetyl-CoA transporter 96.1 1.9 4.2E-05 44.3 22.0 60 456-515 371-430 (510)
262 COG3104 PTR2 Dipeptide/tripept 95.9 0.15 3.3E-06 54.0 13.5 147 64-231 326-485 (498)
263 PF06813 Nodulin-like: Nodulin 95.6 0.13 2.9E-06 50.2 11.3 93 406-514 63-155 (250)
264 PF00854 PTR2: POT family; In 95.1 0.066 1.4E-06 56.0 8.0 125 410-563 2-129 (372)
265 PF06963 FPN1: Ferroportin1 (F 95.0 0.94 2E-05 48.1 16.2 145 37-204 269-414 (432)
266 PF03137 OATP: Organic Anion T 94.9 0.0049 1.1E-07 67.5 -1.4 104 454-563 141-256 (539)
267 TIGR00926 2A1704 Peptide:H+ sy 93.5 1 2.3E-05 50.6 13.4 134 406-562 51-187 (654)
268 PF03092 BT1: BT1 family; Int 92.9 0.69 1.5E-05 49.5 10.5 116 409-559 59-177 (433)
269 KOG0637 Sucrose transporter an 92.9 0.36 7.9E-06 50.6 7.9 166 326-511 32-200 (498)
270 KOG3098 Uncharacterized conser 92.6 4.9 0.00011 42.9 16.0 116 71-203 288-409 (461)
271 COG3202 ATP/ADP translocase [E 91.8 21 0.00045 38.3 24.9 167 25-207 26-209 (509)
272 PF05978 UNC-93: Ion channel r 90.6 3.6 7.9E-05 37.1 10.9 62 453-514 88-149 (156)
273 PF03219 TLC: TLC ATP/ADP tran 90.5 29 0.00063 37.7 22.3 137 60-207 56-205 (491)
274 PF02487 CLN3: CLN3 protein; 90.4 4 8.8E-05 42.8 12.5 61 138-205 334-394 (402)
275 TIGR00769 AAA ADP/ATP carrier 90.2 15 0.00032 39.7 16.9 77 142-224 269-345 (472)
276 KOG3810 Micronutrient transpor 89.0 5.9 0.00013 40.4 11.7 152 47-230 25-180 (433)
277 TIGR00939 2a57 Equilibrative N 88.9 36 0.00078 36.4 28.4 59 453-511 371-429 (437)
278 PF05631 DUF791: Protein of un 88.0 14 0.00031 37.9 14.1 93 453-559 120-218 (354)
279 KOG3097 Predicted membrane pro 86.8 6 0.00013 40.0 10.2 114 25-170 28-141 (390)
280 TIGR00939 2a57 Equilibrative N 86.2 5.5 0.00012 42.6 10.6 57 138-201 371-427 (437)
281 KOG1479 Nucleoside transporter 85.7 50 0.0011 34.7 27.8 57 453-509 342-398 (406)
282 KOG4332 Predicted sugar transp 84.8 9.5 0.00021 37.5 10.2 138 64-228 284-426 (454)
283 KOG3574 Acetyl-CoA transporter 83.0 8.2 0.00018 39.9 9.4 75 478-559 157-238 (510)
284 PF13000 Acatn: Acetyl-coenzym 80.3 19 0.00041 38.7 11.3 77 481-560 145-224 (544)
285 KOG3810 Micronutrient transpor 79.0 32 0.00069 35.4 11.8 129 31-189 239-369 (433)
286 PF03219 TLC: TLC ATP/ADP tran 77.6 1.1E+02 0.0024 33.2 16.7 154 58-218 172-355 (491)
287 PF01770 Folate_carrier: Reduc 77.0 36 0.00077 35.9 12.2 130 29-189 250-383 (412)
288 COG5336 Uncharacterized protei 70.4 16 0.00034 30.3 5.9 42 69-110 49-90 (116)
289 KOG1479 Nucleoside transporter 67.9 16 0.00035 38.2 7.1 92 64-172 284-376 (406)
290 KOG3880 Predicted small molecu 66.4 1.6E+02 0.0034 30.0 16.3 81 64-170 64-145 (409)
291 COG0477 ProP Permeases of the 65.4 1.2E+02 0.0026 29.0 12.9 62 454-515 94-157 (338)
292 PF13000 Acatn: Acetyl-coenzym 57.7 2.8E+02 0.0062 30.2 22.1 62 455-516 406-467 (544)
293 PRK03612 spermidine synthase; 55.0 1.5E+02 0.0033 32.5 12.3 52 463-515 119-170 (521)
294 KOG4830 Predicted sugar transp 53.0 19 0.00041 35.2 4.1 57 38-96 29-94 (412)
295 PF09527 ATPase_gene1: Putativ 50.1 69 0.0015 22.9 5.9 35 71-105 9-43 (55)
296 PF01733 Nucleoside_tran: Nucl 48.2 6.3 0.00014 39.9 0.2 116 67-201 187-303 (309)
297 KOG1237 H+/oligopeptide sympor 47.6 1.4E+02 0.0031 33.1 10.6 92 456-563 154-251 (571)
298 PF07672 MFS_Mycoplasma: Mycop 38.3 2.7E+02 0.0058 27.5 9.6 45 138-187 203-247 (267)
299 PF06912 DUF1275: Protein of u 37.9 3.5E+02 0.0075 25.4 16.6 44 68-112 52-98 (209)
300 KOG4830 Predicted sugar transp 37.4 37 0.0008 33.3 3.5 145 29-201 204-350 (412)
301 COG5336 Uncharacterized protei 36.0 2.4E+02 0.0052 23.6 7.4 35 484-518 36-70 (116)
302 TIGR02230 ATPase_gene1 F0F1-AT 30.8 1.7E+02 0.0037 24.1 5.9 25 78-102 58-82 (100)
303 PF06645 SPC12: Microsomal sig 29.9 1E+02 0.0023 23.9 4.3 46 187-235 13-58 (76)
304 PRK01030 tetrahydromethanopter 29.4 5.5E+02 0.012 25.1 12.1 31 481-511 185-215 (264)
305 COG2233 UraA Xanthine/uracil p 27.2 6.4E+02 0.014 27.1 10.9 114 35-170 22-136 (451)
306 COG3202 ATP/ADP translocase [E 24.9 9.2E+02 0.02 26.2 17.9 161 60-229 178-369 (509)
307 PF12805 FUSC-like: FUSC-like 24.8 2.6E+02 0.0056 27.8 7.4 18 138-155 22-39 (284)
308 PF11947 DUF3464: Protein of u 24.4 1.8E+02 0.0039 26.1 5.3 48 140-197 98-145 (153)
309 PF07857 DUF1632: CEO family ( 22.8 3.2E+02 0.0069 26.8 7.3 28 485-512 74-101 (254)
310 PRK10263 DNA translocase FtsK; 21.6 3.5E+02 0.0076 33.1 8.4 17 194-210 143-159 (1355)
311 KOG4112 Signal peptidase subun 20.9 1.8E+02 0.0039 23.5 4.1 26 186-212 27-52 (101)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-43 Score=379.93 Aligned_cols=534 Identities=39% Similarity=0.683 Sum_probs=469.3
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHH
Q 039943 21 PKGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGC 100 (581)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~ 100 (581)
....|+....++..+.++++++|++..++..|++.+++.+...+...++.+.......++.+++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCcc--cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccch
Q 039943 101 ITYLLGVVLLWLTTILSQAQPPAC--DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKG 178 (581)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (581)
++..+|..++.++...+.+.+.+| +...-.|+.++......++.++-+.++|.|+..|+..++.+|++++.++.++ .
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~-~ 190 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV-K 190 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh-h
Confidence 999999999999988888887765 2223457777777889999999999999999999999999999995444333 5
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHh
Q 039943 179 ALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYK 258 (581)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (581)
.+.+.+++++...++|..++..+..++.++.||.+.|.++.++..+++++++...+.++.++|.+++...+.+++..+.+
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~ 270 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAF 270 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHH
Confidence 56689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhh
Q 039943 259 NRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTG 338 (581)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (581)
+++...+.+++.. ....+........+++++++++....+.+. +.+....+|+.|...++++.|..++.++.+...
T Consensus 271 k~~~~~~~~~~~~-~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~---~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 271 KRKAVVSLDPEEL-YYDCTDSVAIEGTKPFRFLDKAALKTSDDL---KDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HHhccCCCcchhc-cccccccccccCCcccchhhHhhccCCccc---ccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 9887766553222 222222223344667889998877655432 444557889999999999999999999999999
Q ss_pred HHHHHhhcC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHH
Q 039943 339 IMIAVTISQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLL 417 (581)
Q Consensus 339 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~ 417 (581)
+.++..+.| .+.+..|+..++++.++++.++++.++.+..+...+..|+++++..|+.+|+.+++.+++..+++.+|++
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~ 426 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV 426 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence 999999999 9999999999999998569999999999999999999999999999999999987777899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHH
Q 039943 418 FSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGL 497 (581)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 497 (581)
+..+++...+..+..+.+.... +.....+++++|++++++++|++|.+.+++.+++.++++|+++|+.+++++.+
T Consensus 427 ~si~sm~~aa~vE~krl~~~~~-----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 427 LSILSMAVAGIVEAKRLKTAVS-----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh-----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 9999999999999877766543 11223578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcCCCCCCcC-CCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccccccc
Q 039943 498 GMSVASLVASFIMNAVDEITKRGGKEGWIP-SNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPCREE 566 (581)
Q Consensus 498 ~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~ 566 (581)
...+|+.++..+...+...++. ..+|++ +++|+++.+.+|++++....+....+.++.++++.++.+
T Consensus 502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 9999999999999988876543 448999 899999999999999999999999999999888776544
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-38 Score=322.26 Aligned_cols=461 Identities=19% Similarity=0.245 Sum_probs=351.5
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcC----CcchhhHHHHHHHHHHHHHHHHHHHHhhccccCc
Q 039943 17 INKNPKGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYN----METTAGTNVLLIWTAATNFLPIIGAFLADSCVGR 92 (581)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Gr 92 (581)
..++.-++||.++.++..+++|+++|||+...+..|++.+++ ++.+++.-+.+.|....+..++++||++||++|+
T Consensus 12 ~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~ 91 (498)
T COG3104 12 LEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT 91 (498)
T ss_pred cccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 344555689999999999999999999999999999998888 9999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCC
Q 039943 93 YPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGD 172 (581)
Q Consensus 93 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 172 (581)
|+++..+.+++.+|.++++..+ ..+...++++.+++++|.|.+.|+..++++|++|+.|
T Consensus 92 ~~tI~lGail~~iGh~~L~~~~---------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~D 150 (498)
T COG3104 92 RRTIVLGAILMAIGHLVLAISS---------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDD 150 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhccc---------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCC
Confidence 9999999999999999998873 0156789999999999999999999999999999988
Q ss_pred CcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCC--C--CChhhh
Q 039943 173 ENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKA--N--TSLLTG 248 (581)
Q Consensus 173 ~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~--~--~~~~~~ 248 (581)
+ +|..+++++|++.|+|+.++|++.+++.++.||+..|.++++.+.++++.+.+.+++...... . ......
T Consensus 151 p-----rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~ 225 (498)
T COG3104 151 P-----RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNF 225 (498)
T ss_pred c-----ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhh
Confidence 4 599999999999999999999999999999999999999999999999888887755443321 1 111110
Q ss_pred HH----HHHHHHHhhc-cccccCccccccccCCCCCccccCCcchhhhhh-----hhhccCCCCCCCCCCCCCCCCCccc
Q 039943 249 LI----QVLVASYKNR-HIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNK-----ACIIKHPGQDSTPDRRASNPWSLCT 318 (581)
Q Consensus 249 ~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (581)
.. ..+......- ..... .+..+.... ..+..-. ....++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~-------------------~~~~~~~~~~~~i~~~~~~~~---------~~~~~~--- 274 (498)
T COG3104 226 LLPVLGGLVVMILAALLTLLLN-------------------QNTFSGVLLVISILIAIIYFA---------EAFRSP--- 274 (498)
T ss_pred hhhhHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHH---------HHhccC---
Confidence 00 0000000000 00000 000000000 0000000 000111
Q ss_pred hhhHHHHHhHHhhHhHHHhhHHHHHhhcC-CChh-heecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHh
Q 039943 319 VDQVEELKALIKVIPLWSTGIMIAVTISQ-SSFP-VLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIA 396 (581)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (581)
+.. +++|+++..+++++...+||..+.| .+.+ ++.....+++.. ++++++..++.+|++.+++++|+.+++..++.
T Consensus 275 ~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~ 352 (498)
T COG3104 275 KVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLG 352 (498)
T ss_pred ccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhh
Confidence 112 5789999999999999999999999 4444 444445555534 58999999999999999999999999888777
Q ss_pred hhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhh
Q 039943 397 SKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQI 476 (581)
Q Consensus 397 ~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 476 (581)
++. ++ ++...++..|++++++++++.........+ +....+.+|++++++++++||.+.+|...
T Consensus 353 ~~~-~~---ps~~~KFalGl~l~g~~fl~l~~~~~~~~~------------~~~~~s~~~lil~y~l~s~gEL~iSpvGL 416 (498)
T COG3104 353 RGN-KQ---PSTPIKFALGLILAGLGFLILLLAGIWFGG------------PSGLVSVWWLVLSYVLQSFGELFISPVGL 416 (498)
T ss_pred cCC-CC---CCcchHHHHHHHHHHHHHHHHHHHHHhhcC------------CCCCcCHHHHHHHHHHHHHHHHHhCHHHH
Confidence 764 33 789999999999999999988876432111 12357999999999999999999999999
Q ss_pred eeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 039943 477 EFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLAC 556 (581)
Q Consensus 477 ~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 556 (581)
+++.+.+|+...+..++++.+.+..++.++..+.+.... ++ . ..+......+|+.++.+.++..+..+..
T Consensus 417 s~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~-----~----~~~~~~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 417 SMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD-----P----AYTAFIEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-cc-----h----hhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999887763211 00 0 0111234567888888888888777777
Q ss_pred hccccc
Q 039943 557 CKAYGP 562 (581)
Q Consensus 557 ~~~~~~ 562 (581)
.++.++
T Consensus 487 ~~~~~r 492 (498)
T COG3104 487 SPKLNR 492 (498)
T ss_pred hHHHHH
Confidence 665433
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.9e-36 Score=324.06 Aligned_cols=462 Identities=13% Similarity=0.162 Sum_probs=327.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHH
Q 039943 21 PKGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGC 100 (581)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~ 100 (581)
.++|||.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+.+...+..+++|+++||++||||+++++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999569999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhh
Q 039943 101 ITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGAL 180 (581)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 180 (581)
+++.++.+.+.++.+ ....++++|+++|+|.|...|+..++++|++|+++ ++|
T Consensus 89 ~~~~~g~~~~~~~~~----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~-----~~~ 141 (489)
T PRK10207 89 IVLAIGYFMTGMSLL----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD-----PRL 141 (489)
T ss_pred HHHHHHHHHHHHhcc----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc-----hhh
Confidence 999999999998761 12346688999999999999999999999999865 467
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCccccc--CCCCChhhhHHHHH-----
Q 039943 181 QSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQS--KANTSLLTGLIQVL----- 253 (581)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----- 253 (581)
++++++++++.|+|..+||.+++++.++.||++.|+++++..+++++.+...++.+++. +|++++.+.....+
T Consensus 142 ~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~ 221 (489)
T PRK10207 142 DGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS 221 (489)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH
Confidence 88999999999999999999999999999999999998776665655555544333322 22222221101000
Q ss_pred ---HHHHhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHh
Q 039943 254 ---VASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIK 330 (581)
Q Consensus 254 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (581)
............... ...... ......-++.+.. + .+. .++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~-~~~~~~-------~~i~~~~f~~~~~---~-------------------~~~-~~r~r~~~ 270 (489)
T PRK10207 222 VVMIFVCAWLMHNVEVAN-LVLIVL-------SIVVTIIFFREAF---K-------------------LDK-TGRNKMFV 270 (489)
T ss_pred HHHHHHHHHHHhhhhHHH-HHHHHH-------HHHHHHHHHHHHh---c-------------------CCH-HHHHHHHH
Confidence 000000000000000 000000 0000000000000 0 001 12444555
Q ss_pred hHhHHHhhHHHHHhhcC-CChhheecc-cCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCc
Q 039943 331 VIPLWSTGIMIAVTISQ-SSFPVLQAS-TMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRL 408 (581)
Q Consensus 331 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~ 408 (581)
.+.++.....+|..+.| ......+.. ..++... ++.+++..++.++++.+++..|+.++ +.+|+++|+.++++
T Consensus 271 ~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~----l~~rl~~r~~~~~~ 345 (489)
T PRK10207 271 AFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAG----IYTHLGSKGKDLSM 345 (489)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHH----HHHHHhhCCCCCCc
Confidence 55556667888888888 333322222 3444444 67788888889999999889998654 66777666555788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhh
Q 039943 409 KQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMS 488 (581)
Q Consensus 409 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~r 488 (581)
..++.+|+++.+++++......... ...+ ...+.||+++.+++.++||.+.+|..++++++.+|++++
T Consensus 346 ~~k~~~G~~l~~~~~~~~~~~~~~~---~~~~---------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 346 PMKFTLGMFLCSLGFLTAAAAGMWF---ADAQ---------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---cCCC---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 9999999999998887654432110 0001 135778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 039943 489 SIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPC 563 (581)
Q Consensus 489 g~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~ 563 (581)
|.++|++++.+.+|+.++..+........ . ...|. .....+..+|..+++.++++.++++++.++.++.
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~~~~~--~---~~~~~-~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFTAVPD--N---ITDPL-ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc--c---cccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988876442100 0 01000 0122467889999999988888888877765543
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2.8e-35 Score=317.23 Aligned_cols=452 Identities=16% Similarity=0.203 Sum_probs=327.7
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhh--cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHH
Q 039943 21 PKGGLRTLPFIIANEAFERMASMGLMPNMILYLCGE--YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGF 98 (581)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~ 98 (581)
..+++|.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++.+
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 346788899999999999999999999999999887 999999999999999999999999999999994599999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccch
Q 039943 99 GCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKG 178 (581)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (581)
+.++.+++.+++++++ +...++++|.+.|+|.|...|+..++++|++|++++ +
T Consensus 85 ~~~~~~~g~~~~~~~~-----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~----~ 137 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSI-----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM----P 137 (475)
T ss_pred HHHHHHHHHHHHHhcc-----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc----c
Confidence 9999999999888876 566788899999999999999999999999987553 3
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhh----hHHHH--
Q 039943 179 ALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLT----GLIQV-- 252 (581)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-- 252 (581)
+|++++++++.+.|+|..+||++++++.++.||++.|+++++..+++.+.+....+.+++.++++++.. +..+.
T Consensus 138 ~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (475)
T TIGR00924 138 RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLL 217 (475)
T ss_pred cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHH
Confidence 588899999999999999999999999998999999999887766666655554444332222111110 00000
Q ss_pred -----HHHHHhhccccccCccccccccCCCCCccccCCcc-hhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 039943 253 -----LVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSEN-LRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELK 326 (581)
Q Consensus 253 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (581)
+............ .. .. ..+..... ..+........+ +. .+. .+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~-~~--------~~-~~~~~~~~~~~~~~~~~~~~~-------------~~----~~~-~~~~ 269 (475)
T TIGR00924 218 ALLAALALVFFCAWLMHH-VV--------IA-NILLMTVTLAVIIFFFRLAFK-------------PR----LDA-VARN 269 (475)
T ss_pred HHHHHHHHHHHHHHHHhc-cH--------HH-HHHHHHHHHHHHHHHHHHHHh-------------cc----CCH-HHHh
Confidence 0000000000000 00 00 00000000 000000000000 00 011 1233
Q ss_pred hHHhhHhHHHhhHHHHHhhcC--CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCC
Q 039943 327 ALIKVIPLWSTGIMIAVTISQ--SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPC 404 (581)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~ 404 (581)
+....+++++...++|..+.| .+..+++...++.... +++++++.+..+|++.+++..|+.+.+. .|+.+|..
T Consensus 270 ~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~~----~~l~~~~~ 344 (475)
T TIGR00924 270 KMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMIW----TRLGRKGK 344 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHHH----HHHHhCCC
Confidence 444567777888889999998 4445555555666655 7888999999999999999999977543 34433322
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCC
Q 039943 405 QLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELP 484 (581)
Q Consensus 405 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 484 (581)
+.+...++.+|+++.++++...+..... .. .....++||+++.+++.++||.+..|..++++.+.+|
T Consensus 345 ~~~~~~k~~~G~~l~~~~~~~~~~~~~~----~~---------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP 411 (475)
T TIGR00924 345 DPTTPLKFTLGMLFCGASFLTFAASIWF----AD---------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP 411 (475)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhh----cC---------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC
Confidence 2566777899999999998887764321 01 1114689999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 039943 485 RSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYG 561 (581)
Q Consensus 485 ~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~ 561 (581)
++.||+++|++.+...+|+.+++.+.....+.. + ...+|...++++++..++++++.|..+
T Consensus 412 ~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 412 QRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ------G----------VTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------c----------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988877654321 2 255777888888877777777766543
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=4.6e-34 Score=303.68 Aligned_cols=448 Identities=17% Similarity=0.233 Sum_probs=319.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc-CchhhHHHHH
Q 039943 22 KGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCV-GRYPMIGFGC 100 (581)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~-Grr~~~~~~~ 100 (581)
.+|+|.++.+++.++++++++|++..+++.|+++++|++..+++.+.+.+.+...++++++|+++|| + ||||++.++.
T Consensus 5 ~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR-ilGrrr~iliG~ 83 (493)
T PRK15462 5 ASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK-VLGNRMAVMLGA 83 (493)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHH
Confidence 3478899999999999999999999999999999999999999999999999999999999999999 6 9999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhh
Q 039943 101 ITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGAL 180 (581)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 180 (581)
++..++.++++...+ +...++.+..+.++|.|...++..++++|++|+++ ++|
T Consensus 84 il~~lg~lll~~~~~----------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~-----~~R 136 (493)
T PRK15462 84 LLMAIGHVVLGASEI----------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTD-----PRR 136 (493)
T ss_pred HHHHHHHHHHHHhhc----------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCC-----ccc
Confidence 999998877664320 12234455566677888888999999999999866 469
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCccccc---CCCCChhhhHHHH-----
Q 039943 181 QSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQS---KANTSLLTGLIQV----- 252 (581)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----- 252 (581)
.++++++|...|+|+.++|.+++++.+..||++.|.++++.++++++.+....+.+.+. ++++.+.++....
T Consensus 137 ~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (493)
T PRK15462 137 DGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWL 216 (493)
T ss_pred cceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999998887777766665544433221 1111110110000
Q ss_pred -HHH----HHhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHh
Q 039943 253 -LVA----SYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKA 327 (581)
Q Consensus 253 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (581)
... ............. ..+. ....-...++-. .... ....+++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~--~~~~-------------------~~~~~er~r 266 (493)
T PRK15462 217 LVLLVATPALITVLFWKEWSV-YALI--------VATIIGLGVLAK--IYRK-------------------AENQKQRKE 266 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHH--------HHHHHHHHHHHH--HHHh-------------------cCCHHHHhh
Confidence 000 0000000000000 0000 000000000000 0000 011246788
Q ss_pred HHhhHhHHHhhHHHHHhhcC--CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCC
Q 039943 328 LIKVIPLWSTGIMIAVTISQ--SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQ 405 (581)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~ 405 (581)
+...++++...+.||..+.| .++.++...+.|+++. ++++++..++.+|++.+++..|+...+..++.+ |+++
T Consensus 267 ~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~----~~~~ 341 (493)
T PRK15462 267 LGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVA----GNRT 341 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhc----CCCC
Confidence 88888899999999999999 6666666677888877 899999999999999999999998775433322 2223
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCc
Q 039943 406 LRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPR 485 (581)
Q Consensus 406 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 485 (581)
++...++.+|+++++++++++...... .+.+| ..+.+|++..++++++||.+.+|...+.+.+.+|+
T Consensus 342 ~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~~~---------~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~ 408 (493)
T PRK15462 342 VRIWGKFALGLGLMSAGFCILTLSARW----SAMYG---------HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIP 408 (493)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCC---------CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChH
Confidence 788899999999999999888764421 11111 36888999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHH-HHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHH
Q 039943 486 SMSSIASALHGLGM-SVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMAS 549 (581)
Q Consensus 486 ~~rg~~~g~~~~~~-~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~ 549 (581)
+.+|+.+|++.+.. .+|+.++..+.......... +-.....+...|..+|..++.+.+++
T Consensus 409 ~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 409 GVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFD----ASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC----ccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999997754 68888887776655321000 00000001235777888888777766
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1e-32 Score=298.99 Aligned_cols=458 Identities=16% Similarity=0.214 Sum_probs=320.8
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 23 GGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
+++|.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+........+++|+++||++|||+++..+.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 56678899999999999999999999999999999999999999998888777777889999999933999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
+.++..+++++.+ +...++++|+++|++.|...|+..++++|++|+++ ++|.+
T Consensus 98 ~~ig~~l~~~~~~----------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~-----~~~~~ 150 (500)
T PRK09584 98 LAIGYALVAWSGH----------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD-----PRLDG 150 (500)
T ss_pred HHHHHHHHHHhcc----------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc-----hhhhh
Confidence 9999888887641 34567788999999999999999999999998755 45677
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCccccc--CCCCChhhhHH------HHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQS--KANTSLLTGLI------QVLV 254 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~ 254 (581)
++++++++.++|..+||++++++.++.||++.|++.++..+++++.++...+..++. +|++++.+... ....
T Consensus 151 ~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
T PRK09584 151 AFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVA 230 (500)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHH
Confidence 899999999999999999999999999999999998876666655544433322221 22211111100 0000
Q ss_pred HHHhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhH
Q 039943 255 ASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPL 334 (581)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (581)
............+. . +.................. +... ..++++....+.+
T Consensus 231 ~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~-------------------~~~~-~~~~~~~~~~~~~ 281 (500)
T PRK09584 231 LIAIATWLLHNQEI----A-----RMALGVVALGIVVIFGKEA-------------------FAMK-GAARRKMIVAFIL 281 (500)
T ss_pred HHHHHHHHHhcchH----H-----HHHHHHHHHHHHHHHHHHH-------------------hhcC-HHHHHHHHHHHHH
Confidence 00000000000000 0 0000000000000000000 0001 1234555555666
Q ss_pred HHhhHHHHHhhcC-CChhheecc-cCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHH
Q 039943 335 WSTGIMIAVTISQ-SSFPVLQAS-TMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRM 412 (581)
Q Consensus 335 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~ 412 (581)
++..+.+|..+.| +.....+.. ..+.... ++.+++..++.+|++.+++..|+.++ +.+|+++| .+..+++
T Consensus 282 ~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~----~~~~l~~r---~~~~~~~ 353 (500)
T PRK09584 282 MLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAA----IYNKMGDR---LPMPHKF 353 (500)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHH----HHHHhCcC---CCcHHHH
Confidence 6778889999998 555444332 3344444 67788889999999999999998765 45666666 6778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHH
Q 039943 413 GIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIAS 492 (581)
Q Consensus 413 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~ 492 (581)
.+|+++++++++........ .+.+ ...+.+|+++.+++.++||.+.+|...+++.+.+|++.||+.+
T Consensus 354 ~~G~~l~~l~f~~l~~~~~~----~~~~---------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~ 420 (500)
T PRK09584 354 AIGMVLCSGAFLVLPLGAKF----ANDA---------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM 420 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHh----cCCC---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHH
Confidence 99999999999887664421 1111 1467889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 039943 493 ALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPC 563 (581)
Q Consensus 493 g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~ 563 (581)
|++.+...+|+.++..+......... ..+.. ...+.+..+|..+++++++..++++...+..++.
T Consensus 421 g~~~l~~a~g~~~~g~~~~~~~~~~~--~~~~~----~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVANLMAVPDN--VTDPL----MSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccc--cccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988998888877653321000 00000 1122477889999988888777777777665554
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.96 E-value=5.5e-26 Score=249.89 Aligned_cols=333 Identities=23% Similarity=0.406 Sum_probs=265.2
Q ss_pred HHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccC
Q 039943 40 MASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQA 119 (581)
Q Consensus 40 ~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (581)
++|||+...+..|+.+.+|++.+++..+...+.....+.++++|+++|+++||++++..+.++..+|.+++++....+.
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~- 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS- 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc-
Confidence 4689999999999999999999999999999999999999999999999999999999999999999998887641110
Q ss_pred CCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHH
Q 039943 120 QPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAV 199 (581)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 199 (581)
........++.+..+.++|.|+..|+..++.+|+++++++ ++|.+.++++|+++|+|+.+++
T Consensus 80 --------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~----~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 80 --------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL----SLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred --------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 0112345577889999999999999999999999986543 5699999999999999999999
Q ss_pred HHHHhhhcc-------ccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccCcccccc
Q 039943 200 TCIVYIQDN-------LGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEM 272 (581)
Q Consensus 200 ~~~~~i~~~-------~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (581)
++.+++.+. .+|..+|.+++++++++++++....+++++.+|.++...+..+.+....++++.....
T Consensus 142 ~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~------ 215 (654)
T TIGR00926 142 IITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE------ 215 (654)
T ss_pred HHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc------
Confidence 999999744 3699999999999999998888877777766676665555556555555443211110
Q ss_pred ccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-CChh
Q 039943 273 YHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-SSFP 351 (581)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 351 (581)
..+.+|++.+.... ....+++.|++++.+++++....+|..+.| .+.+
T Consensus 216 ------------~~~~~~ld~a~~~~-------------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~ 264 (654)
T TIGR00926 216 ------------HWPLHWLDYAKDKH-------------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRW 264 (654)
T ss_pred ------------ccchhHHHHhcccc-------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 00123343322111 123466789999999999999999999999 8888
Q ss_pred heecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 039943 352 VLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITET 431 (581)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 431 (581)
..|...++..++ ++.+++..++.++++.+++..|+++..+.|..+|.+.+ .++..++.+|++++++++.+.+..+.
T Consensus 265 ~~qa~~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~ 340 (654)
T TIGR00926 265 TLQATRMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQL 340 (654)
T ss_pred HHHHHHhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877777765 67889999999999999999999998888888776554 78899999999999999877666554
Q ss_pred H
Q 039943 432 V 432 (581)
Q Consensus 432 ~ 432 (581)
.
T Consensus 341 ~ 341 (654)
T TIGR00926 341 K 341 (654)
T ss_pred H
Confidence 4
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=1.4e-23 Score=228.16 Aligned_cols=178 Identities=12% Similarity=0.039 Sum_probs=147.5
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
..+..+.+..++..+.. .+.+...+.+.+++|.+.++.+|+.+.+.++..++.++.|+++|| +|||++++.+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~ld~-tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDA-TVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 33444444444444443 344444556678999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+++++++ +.+.++++|+++|+|.+...|...+.+.+.++++ ++|+++++
T Consensus 84 ~~~~~~~a~-----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~------~~r~~~~g 134 (495)
T PRK14995 84 ASLAAAFSP-----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE------KQRNMALG 134 (495)
T ss_pred HHHHHHHcC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH------HHHHHHHH
Confidence 999999988 7889999999999999999888888887777432 67999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCC
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASP 234 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (581)
++....++|..+||.+++++.++.||||.|++...+.++.++......+
T Consensus 135 ~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 135 VWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999987766665554444333
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=8e-24 Score=223.13 Aligned_cols=173 Identities=12% Similarity=0.084 Sum_probs=146.1
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
|..++.+.+..++.....+...+.+ +.+.+++|.+.++.+++.+.+.+++.++.++.|+++|| +||||++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHH
Confidence 3344555555555444444333334 45678999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.+.+.+++ +++.+++.|+++|++.+...+...+++.|++|+ ++|++++
T Consensus 86 ~~~~~~~~~~-----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~ 135 (390)
T PRK03545 86 ASHVLSALAW-----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA-------GKKAQAL 135 (390)
T ss_pred HHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-------hhhhhHH
Confidence 9999999887 788999999999999999999999999999998 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
++...+.++|..++|.+++.+.+..|||+.|++.++..++..+..
T Consensus 136 g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 136 SLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988999999999887666554443
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=2e-23 Score=220.70 Aligned_cols=376 Identities=12% Similarity=0.030 Sum_probs=245.6
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
+|.+..+.+..++..++.....+.++.|+++++|.|..+.+++.+++.++..+++++.|+++|| +||||++..+.++.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHHHHHHH
Confidence 4556677777888888877788899999999999999999999999999999999999999999 799999999999888
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.+.+.++..... ....++..+++.|+++|++.+...+...+++.|.+|+ ++|+++.
T Consensus 93 ~~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~ 150 (399)
T PRK05122 93 LSGLLYLLAGLLAA---------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGA-------LHTGRVI 150 (399)
T ss_pred HHHHHHHHhhhhhc---------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcCh-------hhhccch
Confidence 87766655431000 0112566889999999999999999999999999987 5699999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccc
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKL 264 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (581)
++.....++|..+||.+++++.+..||++.+.+.++..++..+.. .+ .+++++++++..
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~----------------- 209 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RP-RPAVPPVKGERL----------------- 209 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hc-CCCCCCCCccch-----------------
Confidence 998888899999999999999998999998877665444332221 11 111110000000
Q ss_pred cCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhH-hHHHhhHHHHH
Q 039943 265 SSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVI-PLWSTGIMIAV 343 (581)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 343 (581)
++ . +..++..... ...+....+..
T Consensus 210 ------------------------------------------------~~----~---~~~~~~~~~~~~~~~~~~~~~~ 234 (399)
T PRK05122 210 ------------------------------------------------PF----R---RVLGRVWPYGMGLALASIGFGT 234 (399)
T ss_pred ------------------------------------------------hH----H---HHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0001110000 01111111111
Q ss_pred hhcCCChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHH
Q 039943 344 TISQSSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASM 423 (581)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~ 423 (581)
.....+.++.+ ... . . .........+..++..+ +..++.+|.++| +.+..+.++.++++
T Consensus 235 ~~~~~~~~~~~-~~~----~----~-~~~~~~~~~~~~~~~~~----~~g~l~~r~~~~-------~~~~~~~~~~~~~~ 293 (399)
T PRK05122 235 IATFITLYYAA-RGW----D----G-AALALTLFGVAFVGARL----LFGNLINRLGGL-------RVAIVSLLVEILGL 293 (399)
T ss_pred HHHHHHHHHHH-ccc----c----c-chHHHHHHHHHHHHHHH----HHHHHHHHhccH-------HHHHHHHHHHHHHH
Confidence 11111222111 110 0 0 00011111112222222 233455664433 56666666666666
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHH
Q 039943 424 AAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVAS 503 (581)
Q Consensus 424 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 503 (581)
....... +.+..++..++.+++.+...+.......+..|++.||++.|+.+....+|.
T Consensus 294 ~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 294 LLLWLAP----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HHHHHhc----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 5544321 334445567788888888888777777788999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhc
Q 039943 504 LVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCK 558 (581)
Q Consensus 504 ~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~ 558 (581)
.+++.+.+.+.+.. +++..|++.+++++++.+..+++.+
T Consensus 352 ~~~~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 352 GITGPLAGLVASWF----------------GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99998888887632 2577888888888887766665543
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=2.7e-23 Score=211.86 Aligned_cols=181 Identities=15% Similarity=0.169 Sum_probs=165.1
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHH
Q 039943 22 KGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCI 101 (581)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (581)
+..|..++.+.++.|.-..+-+..+..+|. +.+++|.|..++|+++++|.++..++.|+...+.|| +.||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHH
Confidence 344666777888888888888877777765 667999999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+++++.+++++++ +++.++++|++.|+..|.+++...+..+++.|+ ++|+
T Consensus 87 lFi~~n~l~alAp-----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp-------~~~~ 136 (394)
T COG2814 87 LFIVSNLLSALAP-----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPP-------GKRG 136 (394)
T ss_pred HHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-------cchh
Confidence 9999999999999 899999999999999999999999999999999 7799
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCC
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASP 234 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (581)
++.++...+..++..+|.+++.++.|.+|||..|++.+.+.++.++..+...|
T Consensus 137 ~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 137 RALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999988888877776666555
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=2e-23 Score=221.17 Aligned_cols=175 Identities=17% Similarity=0.083 Sum_probs=148.2
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHH
Q 039943 22 KGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCI 101 (581)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (581)
+.+|..+....+..+++.+..+......| .+.+++|++..+.+++.+.+.++..++.++.|+++|| +|||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHH
Confidence 44455555555666666666665545444 5567899999999999999999999999999999999 799999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+..++.+++.++. +++.+++.|++.|++.+...+...+++.|.+|+ ++|+
T Consensus 89 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~ 138 (406)
T PRK11551 89 LFGLFSLATAQAW-----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP-------RLRG 138 (406)
T ss_pred HHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH-------HHHH
Confidence 9888888888877 778899999999999999999999999999988 6799
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
+++++.+....+|..++|.+++.+.+..+|++.|++.+++.++..+.
T Consensus 139 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK11551 139 TAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPL 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888889999999877655544433
No 13
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=4.1e-23 Score=223.26 Aligned_cols=177 Identities=11% Similarity=0.107 Sum_probs=153.5
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.++.+.+..++..+..+.+.+.+|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++|| +|||++++.+.++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHH
Confidence 35666777777888888888888887764 799999999999999999999999999999999 7999999999999988
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+++.+++ +.+.+++.|+++|++.+...|...+++.|.+|+ ++|+++++
T Consensus 88 ~~~~~~~~~-----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 137 (471)
T PRK10504 88 GSLFCALSG-----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR-------EQYMAAMT 137 (471)
T ss_pred HHHHHHHhC-----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH-------HHHHHHHH
Confidence 888887766 678889999999999999999999999999988 67999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCC
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASP 234 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (581)
+.+...++|..++|.+++++.++.||++.|++.....++..+......+
T Consensus 138 ~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 138 FVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999987766655554444333
No 14
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=2.5e-23 Score=220.02 Aligned_cols=168 Identities=17% Similarity=0.203 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
..++...++...+.+.+.++++.|+++++|+|..+.|++.++..+...+..+++|+++|| +|||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHH
Confidence 556678888899999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
.+.+++ +.+.+++.|++.|++.+...|...+++.|.+|+ ++|+++.++.+
T Consensus 92 ~~~~~~-----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~a~~~~~ 141 (400)
T PRK11646 92 TMAIAH-----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP-------HQRGRFFSLLM 141 (400)
T ss_pred HHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHH
Confidence 888776 678889999999999998899999999999987 67999999999
Q ss_pred HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 189 VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
...++|..+||.+++++. .+||++.|++.++..++..+.
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 679999999887766555443
No 15
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=2.3e-23 Score=231.91 Aligned_cols=156 Identities=14% Similarity=0.058 Sum_probs=134.6
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
.+..+.+++.+++|++..+.+++.+++.++.+++.+++|+++|| +|||+++++++++.+++.+++++++
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~---------- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQ---------- 253 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 34555667778999999999999999999999999999999999 7999999999999999999988887
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
+++.++++|++.|++.|+..|...++++|.+|+ +.|++.+++...+..+|.++++.++.+
T Consensus 254 -------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~-------~~Rg~~~g~~~~~~~iG~ila~~la~~ 313 (742)
T TIGR01299 254 -------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ-------EKRGEHLSWLCMFWMIGGIYAAAMAWA 313 (742)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999999998 779999999999999999999987765
Q ss_pred hhcc-------------ccchhhhHHHHHHHHHHHHHHHh
Q 039943 205 IQDN-------------LGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 205 i~~~-------------~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+... .+||+.|++.++..++.++..++
T Consensus 314 il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 314 IIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred HHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 36899888877766655544433
No 16
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=2e-23 Score=226.07 Aligned_cols=411 Identities=12% Similarity=0.064 Sum_probs=234.0
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccch
Q 039943 58 NMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWS 137 (581)
Q Consensus 58 ~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (581)
+.+..+.+++.+++.++..+++++.|+++|| +|||++++.+.++++++.++++++..... +....+..
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~-----------~~~~~~~~ 118 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEFGFT-----------SIGPDNTG 118 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhccccc-----------cccccchh
Confidence 8899999999999999999999999999999 79999999999999998887776420000 00001122
Q ss_pred hHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh--------ccc
Q 039943 138 QLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ--------DNL 209 (581)
Q Consensus 138 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~--------~~~ 209 (581)
....++++|+++|++.|+..+...++++|++|+ ++|+++.++...+..+|..+++++++.+. +.+
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~-------~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 191 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPA-------HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD 191 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCCh-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC
Confidence 467788999999999999999999999999998 67999999999999999999987765543 357
Q ss_pred cchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccCccccccccCCCCCccccCCcchh
Q 039943 210 GWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLR 289 (581)
Q Consensus 210 g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (581)
|||+.|++.++..++..+..++. ++.++...++.+.++..+.. ++ .... .+ ...
T Consensus 192 gWr~~f~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~~~~~~~~----~~--~~~~----------~~---------~~~ 245 (479)
T PRK10077 192 GWRYMFASEAIPALLFLMLLYFV-PETPRYLMSRGKQEQAEGIL----RK--IMGN----------TL---------ATQ 245 (479)
T ss_pred ChHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHcCCHHHHHHHH----HH--HcCC----------hh---------HHH
Confidence 99999998877666655443332 22111000000111100000 00 0000 00 000
Q ss_pred hhhhh-hhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-C---ChhheecccCCCCCCC
Q 039943 290 CLNKA-CIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-S---SFPVLQASTMDRHITP 364 (581)
Q Consensus 290 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~ 364 (581)
.++.. ...+.+. +..+..+...............+.+ . ...++.+... ...
T Consensus 246 ~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~~-- 301 (479)
T PRK10077 246 ALQEIKHSLDHGR---------------------KTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KTL-- 301 (479)
T ss_pred HHHHHHHHHHHhh---------------------hhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HHc--
Confidence 00000 0000000 0000000000000000000000111 0 0000000000 000
Q ss_pred CcccC-cccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCC
Q 039943 365 NFEIP-SGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGIS 443 (581)
Q Consensus 365 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 443 (581)
+++.. .........+..++.. .+..++.+|+++| +.+..+.++++++++.+......
T Consensus 302 g~~~~~~~~~~~~~~~~~~i~~----~~~g~l~dr~g~r-------~~~i~~~~~~~v~~~~l~~~~~~----------- 359 (479)
T PRK10077 302 GASTDIALLQTIIVGVINLTFT----VLAIMTVDKFGRK-------PLQIIGALGMAIGMFSLGTAFYT----------- 359 (479)
T ss_pred CCCCchHHHHHHHHHHHHHHHH----HHHHHHHHHhcCh-------HHHHHhHHHHHHHHHHHHHHHhc-----------
Confidence 00000 0011111111222222 2334466776655 56777777777777665543210
Q ss_pred CCCCCcccchHHHHHHHHHHHHHHHHH-HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Q 039943 444 DDPRAVVKMSAMWVLPYHVLSGLAMAF-NMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGK 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~ 522 (581)
....++....+++.+.+... +.|..+.++.|.+|+++|+++.|+.+..+++++++++.+.+.+.+.
T Consensus 360 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~------ 426 (479)
T PRK10077 360 -------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN------ 426 (479)
T ss_pred -------CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc------
Confidence 11122233333444444433 3466788889999999999999999999999999998888766521
Q ss_pred CCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccccccchhhhhhhccC
Q 039943 523 EGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPCREEASEALDEKDG 576 (581)
Q Consensus 523 ~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (581)
+|..+ ..+....|++.++++++++++.+++.+|+|+++.+|.++..++..
T Consensus 427 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 476 (479)
T PRK10077 427 -SWLVA---HFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPET 476 (479)
T ss_pred -cchhh---hccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhcc
Confidence 12111 111244677778888888888888888988888887776655543
No 17
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=3.9e-23 Score=217.97 Aligned_cols=373 Identities=15% Similarity=0.058 Sum_probs=239.3
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+.++.+.+..++..++.....+.+|.|+++++|+|..+.+++.+++.++..+++++.|+++|| +||||+++.+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHHH
Confidence 445666677777777777777888889999999999999999999999999999999999999 7999999999887776
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+........+. ....+++.+++.|+++|++.+...+...+++.|.+|+ ++|+++.+
T Consensus 94 ~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~a~~ 151 (392)
T PRK12382 94 AGLAYLLAAILPV---------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP-------KHSGKVMS 151 (392)
T ss_pred HHHHHHhhhcccc---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc-------cccchhhh
Confidence 6543332210000 0112678899999999999999889889999999987 56999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcccccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLS 265 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (581)
+...+.++|..++|.+++++.+.+||++.+.+..+..++.+.. . ++.++.+++++...
T Consensus 152 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~------------------ 209 (392)
T PRK12382 152 WNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF---N-GTVRKVPAHAGERP------------------ 209 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH---H-HhccCCCCCcccCc------------------
Confidence 9999999999999999999988899998766554433322211 1 11111111000000
Q ss_pred CccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHH-HhHHhhHhHHHhhHHHHHh
Q 039943 266 SQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEEL-KALIKVIPLWSTGIMIAVT 344 (581)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 344 (581)
+.. + ..+.. +.... ..+....+...
T Consensus 210 -----------------------~~~---------------------------~-~~~~~~~~~~~---~~l~~~~~~~~ 235 (392)
T PRK12382 210 -----------------------SLW---------------------------S-VVGLIWKPGLG---LALQGVGFAVI 235 (392)
T ss_pred -----------------------hHH---------------------------H-HHHHHHHhHHH---HHHHHHHHhHH
Confidence 000 0 00000 00000 00111111111
Q ss_pred hcCCChhheecccCCCCCCCCcccCccccc-chhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHH
Q 039943 345 ISQSSFPVLQASTMDRHITPNFEIPSGSFG-IFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASM 423 (581)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~ 423 (581)
....+.++.+ . .. ....+. ....+..++..++ ..++.+|.++| +.+..+..+.++++
T Consensus 236 ~~~~~~~~~~-~----~~------~~~~~~~~~~~~~~~~~~~~----~g~l~~r~g~~-------~~~~~~~~~~~~~~ 293 (392)
T PRK12382 236 GTFVSLYFAS-K----GW------AMAGFTLTAFGGAFVLMRVL----FGWMPDRFGGV-------KVAIVSLLVETVGL 293 (392)
T ss_pred HHHHHHHHHh-c----CC------chhHHHHHHHHHHHHHHHHH----HHHHHHhcCCC-------eehHHHHHHHHHHH
Confidence 1111122111 0 11 001111 1111112222222 33456665544 35556666666665
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHH
Q 039943 424 AAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVAS 503 (581)
Q Consensus 424 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 503 (581)
....... +.+...+..++.+++.+...+.....+.+.+|++.||++.|+.+....+|+
T Consensus 294 ~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 294 LLLWLAP----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAY 351 (392)
T ss_pred HHHHHcc----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 5443321 334445566777888888788777788888999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhh
Q 039943 504 LVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACC 557 (581)
Q Consensus 504 ~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 557 (581)
.+++.+.+.+.+.. + ++..|.+.+++.+++.+..+...
T Consensus 352 ~ig~~~~g~l~~~~------g----------~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 352 GVSGPLAGMLATSF------G----------YPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHHHh------C----------chHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999888743 2 46788888888888777766553
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=2.7e-23 Score=222.23 Aligned_cols=165 Identities=9% Similarity=0.099 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHH
Q 039943 30 FIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVL 109 (581)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 109 (581)
..++..++..+..+.+...+|.+ .+++|++..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~ 104 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINIL 104 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHH
Confidence 33344444444444555555554 45799999999999999999999999999999999 79999999999999999999
Q ss_pred HHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHH
Q 039943 110 LWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYV 189 (581)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (581)
+++++ +++.+++.|++.|++.|...+...+++.|++|+ ++|+++.++++.
T Consensus 105 ~~~~~-----------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~-------~~rg~~~~~~~~ 154 (434)
T PRK11663 105 FGFSS-----------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR-------TERGGWWAIWNT 154 (434)
T ss_pred HHHHh-----------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH-------HHHHHHHHHHHH
Confidence 88887 788888999999999999999999999999998 679999999999
Q ss_pred HHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHH
Q 039943 190 SVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSA 226 (581)
Q Consensus 190 ~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~ 226 (581)
+.++|..++|.+.+++.+.+|||+.|++.++..++..
T Consensus 155 ~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 155 AHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998999999998877655443
No 19
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=5.6e-23 Score=216.94 Aligned_cols=174 Identities=14% Similarity=0.141 Sum_probs=153.6
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
+|.++.+....++...+.+.+.++++.|+++++|++..+.+++.+++.+++.++.++.|+++|| +|||+++..+.++..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHH
Confidence 4567778888889999999999999999999999999999999999999999999999999999 799999999999988
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.+++.+++ +.+.+++.|.+.|.+.+...+...++..|.+|+ ++|++++
T Consensus 85 ~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 134 (395)
T PRK10054 85 SGFIAIPLVN-----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSS-------TSKTKIF 134 (395)
T ss_pred HHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------hHHHHHH
Confidence 8888888877 677777888888888888888899999999987 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
++.+...++|.+++|.+++++.+ .+|+.+|++.++..++..+...
T Consensus 135 g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 135 SLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875 7999999988777666544433
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=3.8e-23 Score=219.96 Aligned_cols=387 Identities=13% Similarity=0.010 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
..++...++..+........+|.+. ++++.+..+.+++.+.+.++..++.++.|+++|| +|||+++..+.++..++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~~~~ 97 (417)
T PRK10489 20 RAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGLGFI 97 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHHHHH
Confidence 3444455566666555555566555 5678899999999999999999999999999999 6999999998888777766
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
++...... ...+++.+++.|++.|++.+...+...+++.|.+|+ ++|+++.++.+
T Consensus 98 ~~~~~~~~------------------~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 152 (417)
T PRK10489 98 GLALNAFL------------------PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR-------ENLMQAGAITM 152 (417)
T ss_pred HHHHHHHc------------------CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH-------HHHHHHHHHHH
Confidence 55432100 011567788899999999888888889999999987 66999999999
Q ss_pred HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCC-CCChhhhHHHHHHHHHhhccccccCc
Q 039943 189 VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKA-NTSLLTGLIQVLVASYKNRHIKLSSQ 267 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (581)
...++|..+||.+++++.+..+|++.|++.++..++..+..... ++.++++. +++..++
T Consensus 153 ~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~------------------- 212 (417)
T PRK10489 153 LTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PALPPPPQPREHPLRS------------------- 212 (417)
T ss_pred HHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCCCCCCcccccchHH-------------------
Confidence 99999999999999999888899999988777665554433322 21110000 0000000
Q ss_pred cccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC
Q 039943 268 TTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ 347 (581)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (581)
..+. + ....+.+............... .....
T Consensus 213 ----------------------~~~~--------------------~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (417)
T PRK10489 213 ----------------------LLAG--------------------F-----RFLLASPVVGGIALLGGLLTMA-SAVRV 244 (417)
T ss_pred ----------------------HHHH--------------------H-----HHHHcChHHHHHHHHHHHHHHH-HhHHH
Confidence 0000 0 0000001111111010000011 11111
Q ss_pred -CChhheecccCCCCCCCCcccCcccccch---hhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHH
Q 039943 348 -SSFPVLQASTMDRHITPNFEIPSGSFGIF---TIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASM 423 (581)
Q Consensus 348 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~ 423 (581)
.+.+..+... .+....+.+ ..+..++...+ ..++.+| .+..+.+..+.++.++++
T Consensus 245 ~~p~~~~~~~g----------~~~~~~g~~~~~~~~g~~ig~~~----~~~l~~~-------~~~~~~l~~~~~~~~~~~ 303 (417)
T PRK10489 245 LYPALADEVWQ----------MGAAQIGLLYAAVPLGAALGALT----SGWLAHS-------ARPGLLMLLSTLGSFLAV 303 (417)
T ss_pred hhHHHHHhccC----------CChhHhHHHHHHHHHHHHHHHHH----HHHhhhc-------cCcchHHHHHHHHHHHHH
Confidence 2222221111 111112211 12222222222 2223333 223345566666666665
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHH
Q 039943 424 AAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVAS 503 (581)
Q Consensus 424 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 503 (581)
+.+... .+.+......++.+++.+...+...+++.+.+|++.||++.|+.+....+|.
T Consensus 304 ~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 361 (417)
T PRK10489 304 GLFGLM----------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGD 361 (417)
T ss_pred HHHHcc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhH
Confidence 544331 1334445566777777777777777888899999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccccccchhh
Q 039943 504 LVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPCREEASE 569 (581)
Q Consensus 504 ~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (581)
.+++.+.+.+.+..+ +...+...+++.++..++.+...+++|++++||.+
T Consensus 362 ~~g~~l~G~l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (417)
T PRK10489 362 AIGAALLGGLGAMMT----------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPE 411 (417)
T ss_pred hHHHHHHHHHHHHhc----------------hhhHHHHHHHHHHHHHHHHHHhccccccccccccc
Confidence 999999999987432 34566777777777777777777888877777653
No 21
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=1.2e-22 Score=221.35 Aligned_cols=180 Identities=16% Similarity=0.054 Sum_probs=135.8
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhh-----cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGE-----YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGF 98 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~ 98 (581)
+++.+....+..+.+.+....+....+ .+.++ .+.+..+.+++.+.+.++..++.++.|+++|| +|||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHH
Confidence 333444444555555554433333333 33332 24556678899999999999999999999999 799999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccch
Q 039943 99 GCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKG 178 (581)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (581)
+.+++.++.++++++.+.. +..+...++++|++.|++.|...+..+++++|.+|+ +
T Consensus 92 ~~~~~~v~~~~~~~~~~~~-----------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~-------~ 147 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSS-----------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK-------K 147 (502)
T ss_pred HHHHHHHHHHHHHHccCcc-----------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh-------h
Confidence 9999999998888765100 011367899999999999999999999999999999 7
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHhhhc-----------------------cccchhhhHHHHHHHHHHHHHH
Q 039943 179 ALQSYFSWYYVSVLASSMVAVTCIVYIQD-----------------------NLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~p~~~~~i~~-----------------------~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
+|+++.++.+....+|..+++.+..++.. .++||+.|.+.++..++.++..
T Consensus 148 ~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~ 221 (502)
T TIGR00887 148 WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR 221 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999988765431 2479999988777666554443
No 22
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=6.2e-23 Score=213.99 Aligned_cols=153 Identities=13% Similarity=0.052 Sum_probs=124.6
Q ss_pred hhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHh-hhcccCCCCcc
Q 039943 46 MPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLT-TILSQAQPPAC 124 (581)
Q Consensus 46 ~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 124 (581)
.....+.+++++|++.++.+++.+.+.+++.+++++.|+++|| +|||+++..++.....+.. .... .
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~-~~~~~~---------- 77 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAG-RLLDPF---------- 77 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHH-HHHHhc----------
Confidence 3444456678999999999999999999999999999999999 6999987766555544433 2232 3
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
++..+++.|+++|++.+.. +...+.++|++|+ ++|++++++.+.+..+|..++++++++
T Consensus 78 -------------~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~-------~~r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 78 -------------NYEWLLACQLLAALGQPFL-LNAFAPAASQIRE-------ERRDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred -------------cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999864 5556667999998 679999999999999999999999999
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 205 IQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 205 i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+.+.+|||+.|++.+++.++..+.+..
T Consensus 137 l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 137 IYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999877766555444443
No 23
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=5.4e-24 Score=214.02 Aligned_cols=176 Identities=14% Similarity=0.095 Sum_probs=159.3
Q ss_pred chHHHHHHHHHHHHHHHhhhhh---HHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMP---NMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~---~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
|.-+.+++..++...++|-..- ...+++.++.++|.+|.|.+.+++.+++.++..+.|.++|| .+.|+.+.+++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLil 103 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHH
Confidence 3347888888899999998664 45678888999999999999999999999999999999999 6999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
.++..+++++++ ++..+.+..++.|..+|...|.+...++.++++ ++||+
T Consensus 104 sai~nil~Gfs~-----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr-------~eRG~ 153 (448)
T COG2271 104 SAIVNILFGFSP-----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR-------KERGT 153 (448)
T ss_pred HHHHHHHHhhhh-----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc-------cccCc
Confidence 999999999998 889999999999999999999999999999999 67999
Q ss_pred HHHHHHHHHhhHHHHHHHHH--HhhhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 183 YFSWYYVSVLASSMVAVTCI--VYIQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~--~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
..++.+.+.|+|+++.|++. +++..+.+||..|++++++.++..+..+..
T Consensus 154 ~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 154 WWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred eEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 999998999999999999876655544443
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=4.5e-22 Score=210.01 Aligned_cols=176 Identities=11% Similarity=0.143 Sum_probs=152.4
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHH
Q 039943 20 NPKGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFG 99 (581)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (581)
..|..|+.+..+.+..++.....|.....+|+ +.+++|+++++.++..+++.++..++.++.|+++|| +|||+++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~ 91 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILF 91 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHH
Confidence 44556776666666666666666666666665 456899999999999999999999999999999999 7999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchh
Q 039943 100 CITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGA 179 (581)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (581)
.++.+++.+++.+++ +++.+++.|+++|++.+...|...+++.|++|+ ++
T Consensus 92 ~~~~~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~ 141 (394)
T PRK10213 92 AVLLTLSCLLVSFAN-----------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPP-------RT 141 (394)
T ss_pred HHHHHHHHHHHHHHC-----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH-------hH
Confidence 999999998888877 889999999999999999999999999999988 67
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHH
Q 039943 180 LQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~ 227 (581)
|+++.++...+.++|..++|.+++++.+.+|||+.|++.++..++..+
T Consensus 142 ~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 142 VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988765554433
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=1.2e-22 Score=212.71 Aligned_cols=155 Identities=10% Similarity=0.098 Sum_probs=139.5
Q ss_pred hhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 039943 46 MPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACD 125 (581)
Q Consensus 46 ~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (581)
.....+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++..+++++.
T Consensus 13 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~----------- 80 (399)
T TIGR00893 13 LSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAG----------- 80 (399)
T ss_pred hhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHc-----------
Confidence 3445566888999999999999999999999999999999999 7999999999999999999988887
Q ss_pred ccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhh
Q 039943 126 QLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYI 205 (581)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i 205 (581)
+++.+++.|++.|++.+...+...+++.|.+|+ ++|++.+++.....++|..++|.+++++
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l 141 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA-------SERATAVSIFNSAQGLGGIIGGPLVGWI 141 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH-------HHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 788899999999999999999999999999998 7799999999999999999999999999
Q ss_pred hccccchhhhHHHHHHHHHHHHHHHh
Q 039943 206 QDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 206 ~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+..+|++.|++.++..++..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 142 LIHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHhhh
Confidence 88899999999887766655544443
No 26
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.92 E-value=2.1e-22 Score=213.84 Aligned_cols=177 Identities=12% Similarity=0.066 Sum_probs=148.8
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITY 103 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (581)
+|+.++...+..+++......+ .+..+.+++++|++.++.+++.+++.+++.+++++.|+++|| +|||+++..+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHH
Confidence 4555555555555555544433 445558899999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++..++++++ +.+.+++.|++.|++.+...|...+++.|++|+ ++|++.
T Consensus 84 ~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~rg~~ 133 (412)
T TIGR02332 84 GIASTATMFAT-----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA-------YFRARA 133 (412)
T ss_pred HHHHHHHHHhc-----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH-------HHHHHH
Confidence 99999999987 788899999999999999999999999999998 779999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhc------cccchhhhHHHHHHHHHHHHHHHhc
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQD------NLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~------~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
.++++.+..+|..++|.+++++.+ ..|||+.|++.++..++..+...+.
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998864 3699999999877665544444333
No 27
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.92 E-value=2.9e-22 Score=217.65 Aligned_cols=176 Identities=13% Similarity=0.126 Sum_probs=131.5
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchh-hHHH-----HHHHHHHHHHHHHHHHHhhccccCchhhHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTA-GTNV-----LLIWTAATNFLPIIGAFLADSCVGRYPMIGFG 99 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-~~~i-----~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~ 99 (581)
+.+....+..+++.+.+. +..+..+++.++++.+.++ .+++ .++..++..+++++.|+++|| +|||+++.++
T Consensus 16 ~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~ 93 (490)
T PRK10642 16 KAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHH
Confidence 445555567777776654 4555666888887644322 1222 466778899999999999999 6999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchh
Q 039943 100 CITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGA 179 (581)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (581)
+++++++.+++++++++.++ ......++++.|+++|++.|+..+...++++|++|+ ++
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~---------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~-------~~ 151 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATI---------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPD-------RK 151 (490)
T ss_pred HHHHHHHHHHHHhcccHHHH---------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCC-------CC
Confidence 99999999999998832110 000112488999999999999999999999999998 66
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHhhh--------ccccchhhhHHHHHHHHHH
Q 039943 180 LQSYFSWYYVSVLASSMVAVTCIVYIQ--------DNLGWKVGFGVPAVISLLS 225 (581)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~p~~~~~i~--------~~~g~~~~f~~~~~~~~i~ 225 (581)
|++..++...+..+|..+|+.+..++. ..+|||++|++.++..+++
T Consensus 152 Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~ 205 (490)
T PRK10642 152 RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG 205 (490)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH
Confidence 999988888877888888876654432 2579999999876654443
No 28
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=1.7e-22 Score=214.03 Aligned_cols=379 Identities=13% Similarity=0.107 Sum_probs=240.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchh-----hHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTA-----GTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCI 101 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-----~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (581)
....+.+..++..+++....+.+|.|.+ ++|++..+ .+++.+++.+...++.++.|+++|| +|||+++..+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHHHH
Confidence 3555666777788887778888888885 68888665 3888999999999999999999999 699999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+..++.+++.+.+ +++.+++.|++.|++.+ ..+...+++.|.+|+ ++|+
T Consensus 93 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~-------~~~~ 141 (408)
T PRK09874 93 GMGIVMVLMGLAQ-----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPR-------NKSG 141 (408)
T ss_pred HHHHHHHHHHHHh-----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCH-------hhhh
Confidence 9888888887776 78889999999999865 567778888999887 6799
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcc
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRH 261 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (581)
+..++.+...++|..++|.+++.+.+..+|++.|++.+++.++..+...+..++..+++++++. .+ .+ +
T Consensus 142 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-------~-- 210 (408)
T PRK09874 142 WALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LH-MR-------E-- 210 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hH-HH-------H--
Confidence 9999999999999999999999999889999999988877666554443332221110000000 00 00 0
Q ss_pred ccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHh-HHHhhHH
Q 039943 262 IKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIP-LWSTGIM 340 (581)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 340 (581)
... .. ++.+....... .......
T Consensus 211 ----------------------------~~~---~~-------------------------~~~~~~~~~~~~~~~~~~~ 234 (408)
T PRK09874 211 ----------------------------VVT---SL-------------------------KNPKLVLSLFVTTLIIQVA 234 (408)
T ss_pred ----------------------------HHH---hC-------------------------cCCchHHHHHHHHHHHHHH
Confidence 000 00 00000000000 0111111
Q ss_pred HHHhhcC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHH
Q 039943 341 IAVTISQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFS 419 (581)
Q Consensus 341 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~ 419 (581)
... ... .+.+............ .....+.....+..++..+. ..++.||+++| +.+..+.++.
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~l~~~~~~~~----~g~l~dr~g~~-------~~~~~~~~~~ 298 (408)
T PRK09874 235 TGS-IAPILTLYVRELAGNVSNIA----FISGMIASVPGVAALLSAPR----LGKLGDRIGPE-------KILITALIFS 298 (408)
T ss_pred HHH-HHHHHHHHHHHHhccchHHH----HHHHHHHHHHHHHHHHHHHH----HHHHHhccccc-------hhHHHHHHHH
Confidence 000 001 1111111000000000 00000111111122222222 23355555444 4555665555
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHH
Q 039943 420 TASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGM 499 (581)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 499 (581)
.++++..... .+.+...+..++.+++.+...|.......+..|++.+|+..++.+...
T Consensus 299 ~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 356 (408)
T PRK09874 299 VLLLIPMSFV----------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFR 356 (408)
T ss_pred HHHHHHHHHh----------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHH
Confidence 5544433321 133444556677788888888888888888899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 500 SVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 500 ~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
.+|..+++.+.+.+.+.. ++...|++.+++.+++.+..+...++
T Consensus 357 ~~g~~~gp~~~G~l~~~~----------------g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 357 DIGNVTGPLMGAAISANY----------------GFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHHHHhhHHHHHHHHhhc----------------chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999887532 24778888888888887776665443
No 29
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.91 E-value=3.9e-23 Score=223.17 Aligned_cols=158 Identities=11% Similarity=0.010 Sum_probs=129.8
Q ss_pred HHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 039943 48 NMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQL 127 (581)
Q Consensus 48 ~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (581)
...+.+.+++|++.++.+++.+++.+++.+++++.|+++|| +|||+++..++++..++....++....
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~----------- 117 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLILSAICMLGFGASLGS----------- 117 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 34556778999999999999999999999999999999999 699999999888887777666653100
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 128 RSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
...+++.+++.|++.|++.+...|...++++|++|+ ++|+++.+++..+.++|.++++.+..++..
T Consensus 118 -------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 118 -------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPR-------RKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred -------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCc-------cceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 011788899999999999999999999999999998 669999999999999999999988877665
Q ss_pred cc---cchhhhHHHHHHHHHHHHHHHh
Q 039943 208 NL---GWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 208 ~~---g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.. +|+..|.+.+++.++..+..++
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 43 6898888877766554444333
No 30
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=2.8e-22 Score=215.76 Aligned_cols=152 Identities=18% Similarity=0.263 Sum_probs=128.6
Q ss_pred HHhhhhcCCc--------chhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 039943 51 LYLCGEYNME--------TTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPP 122 (581)
Q Consensus 51 ~yl~~~~~~s--------~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (581)
+.+..+++++ ..+.+++.+++.++..++.++.|+++|| +|||++++.+.+++.++.+++.+..+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~------- 123 (481)
T TIGR00879 52 ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAF------- 123 (481)
T ss_pred hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 3444555555 8999999999999999999999999999 79999999999999999888876551
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHH
Q 039943 123 ACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCI 202 (581)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 202 (581)
..+.+.+++.|++.|++.+...+...++++|.+|+ ++|+++.++.+.+.++|..+++.++
T Consensus 124 -------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 124 -------------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPK-------ALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred -------------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCCh-------hhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 12456899999999999999999999999999998 6799999999999999999999998
Q ss_pred ---HhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 203 ---VYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 203 ---~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+...+..+||+.|++.++..++..+..+
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 214 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLLFLGLF 214 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 6666778999999997665555544333
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.91 E-value=3.5e-22 Score=210.86 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=131.7
Q ss_pred hhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 039943 43 MGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPP 122 (581)
Q Consensus 43 ~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (581)
+.+.+.+| .+++++|+|..+.+++.+++.+++.+++++.|+++|| +|||+++..+..+++++.+++++++
T Consensus 26 ~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~-------- 95 (393)
T PRK09705 26 TSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYP-------- 95 (393)
T ss_pred hccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCc--------
Confidence 44444444 5778999999999999999999999999999999999 7999999999999999999999998
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHH
Q 039943 123 ACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCI 202 (581)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 202 (581)
++..++++|+++|++.+...+...+++.|++|+ +|+++.+.+..+.++|..+++.++
T Consensus 96 ---------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~~~g~~~g~~~~ 152 (393)
T PRK09705 96 ---------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQ--------RTPLVMGLWSAALMGGGGLGAAIT 152 (393)
T ss_pred ---------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccc--------cchhHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999998863 489999999999999999999999
Q ss_pred Hhhhccc-cchhhhHHHHHHHHHHH
Q 039943 203 VYIQDNL-GWKVGFGVPAVISLLSA 226 (581)
Q Consensus 203 ~~i~~~~-g~~~~f~~~~~~~~i~~ 226 (581)
+++.++. +||+.+.+.++..++..
T Consensus 153 ~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 153 PWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9988875 89998776555444433
No 32
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=7.8e-22 Score=206.32 Aligned_cols=171 Identities=14% Similarity=0.109 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHH-HHHHHHHHHHHH
Q 039943 32 IANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGF-GCITYLLGVVLL 110 (581)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~ 110 (581)
.+..++..++.....+.++.|+++++|.+..+.+++.+++.+...+..++.|+++|| +||||.++. +.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHH
Confidence 345667777777888999999999999999999999999999999999999999999 699887654 555556666777
Q ss_pred HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHH
Q 039943 111 WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVS 190 (581)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (581)
++++ +++.+++.|++.|.+.+...|...++..|..|+++ +.+....+..+..
T Consensus 82 ~~~~-----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 133 (375)
T TIGR00899 82 AWNR-----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG-----REAVMFSSVMRAQ 133 (375)
T ss_pred Hhcc-----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc-----hhhHHHHHHHHHH
Confidence 7766 67778888999988888888888888888876622 1222335777778
Q ss_pred HhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 191 VLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 191 ~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.++|..++|.+++++.+..|||+.|++.+++.++..+....
T Consensus 134 ~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999899999999988876655544433
No 33
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=1.4e-21 Score=207.25 Aligned_cols=158 Identities=18% Similarity=0.195 Sum_probs=135.2
Q ss_pred HHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCC
Q 039943 41 ASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQ 120 (581)
Q Consensus 41 ~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (581)
+...+.+.++. +.+++|.+..+.++..+++.+++.++.++.|+++|| +||||++..+.++..++.+++.+++
T Consensus 28 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~------ 99 (406)
T PRK15402 28 ANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGVAFFILTCLAILLAQ------ 99 (406)
T ss_pred hhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHc------
Confidence 33334444544 557899999999999999999999999999999999 7999999999999999888888876
Q ss_pred CCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHH
Q 039943 121 PPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVT 200 (581)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 200 (581)
+.+.+++.|++.|++.+...+...+++.|.+|+ ++|.+..++......+|..++|.
T Consensus 100 -----------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~ 155 (406)
T PRK15402 100 -----------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEE-------ADAIKITALMANVALLAPLLGPL 155 (406)
T ss_pred -----------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhCh-------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 677889999999999998888999999999988 56888888888888899999999
Q ss_pred HHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 201 CIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 201 ~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+++++.++.+|++.|++.+++.++..+...
T Consensus 156 i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 156 VGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 999998888999999988777666555443
No 34
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=4.2e-22 Score=214.19 Aligned_cols=157 Identities=13% Similarity=0.040 Sum_probs=126.1
Q ss_pred hHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 039943 47 PNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ 126 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
....+|+.++ |++.++.+++.+++.++..+++++.|+++|| +|||++++.+.++.+++.+.+++....
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i~~~~~~~~~~~---------- 116 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAAVMLFMGFVPWA---------- 116 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHHHHHHHHhhhcc----------
Confidence 3445577777 9999999999999999999999999999999 799999999999999988888776411
Q ss_pred cccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHH-HHHHHHHhh
Q 039943 127 LRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSM-VAVTCIVYI 205 (581)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~p~~~~~i 205 (581)
..+...+++.|++.|++.+...|...+.+.|++|+ ++|+++.++++.+.++|.. .+|+++..+
T Consensus 117 ---------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 117 ---------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-------KERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred ---------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh-------HHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 11567788899999999999888888889999988 6799999999999888864 455544333
Q ss_pred hccccchhhhHHHHHHHHHHHHHHHh
Q 039943 206 QDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 206 ~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
....+||+.|++.+++.++..+...+
T Consensus 181 ~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 181 AWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 33459999999987766554443333
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=1.1e-21 Score=209.85 Aligned_cols=173 Identities=18% Similarity=0.191 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcC---CcchhhHHHHHHHHHHH---HHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYN---METTAGTNVLLIWTAAT---NFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~i~~~~~~~~---~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
....+..+++.+.... .+++.+++.++++ .+..+.+.+.+++..+. .++.+++|+++|| +||||++..+.++
T Consensus 25 ~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~ 102 (432)
T PRK10406 25 VGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCM 102 (432)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHH
Confidence 3333455666666544 6666778888874 55555444444444444 4999999999999 6999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
+.++.+++++++++.. ....+...+++.|+++|++.|+..|...++++|.+|+ ++|++
T Consensus 103 ~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~-------~~rg~ 160 (432)
T PRK10406 103 MCFGSLVIACLPGYET---------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVE-------GRKGF 160 (432)
T ss_pred HHHHHHHHhhcCCchh---------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC-------CcccH
Confidence 9999999998773211 0011345789999999999999999999999999998 56999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhh--------ccccchhhhHHHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQ--------DNLGWKVGFGVPAVISLLS 225 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~--------~~~g~~~~f~~~~~~~~i~ 225 (581)
..+..+.+.+.|..+++++...+. +.+|||++|++.++..++.
T Consensus 161 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 161 YASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 999888888888888887655543 2579999999877765544
No 36
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=4.7e-22 Score=206.53 Aligned_cols=353 Identities=13% Similarity=0.023 Sum_probs=227.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHH
Q 039943 31 IIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLL 110 (581)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 110 (581)
++...++..++.......+|.|.. +++.+..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHH
Confidence 344555566665555666676665 689999999999999999999999999999999 799999999998888877777
Q ss_pred HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHH
Q 039943 111 WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVS 190 (581)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (581)
.+..... ..+.+.+++.|++.|++.+...+...++++|.+|+ ++|++.+++.+..
T Consensus 82 ~~~~~~~------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 136 (365)
T TIGR00900 82 PFVALLG------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE-------EQLTQANSLSQAV 136 (365)
T ss_pred HHHHHcC------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-------HHHHHHHhHHHHH
Confidence 6654111 12678899999999999999999999999999998 6799999999999
Q ss_pred HhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhh-hHHHHHHHHHhhccccccCccc
Q 039943 191 VLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLT-GLIQVLVASYKNRHIKLSSQTT 269 (581)
Q Consensus 191 ~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (581)
.++|..++|.+++++.+..||++.|++.++..++..+.......+.++++ ++++.+ +..+.
T Consensus 137 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------------- 198 (365)
T TIGR00900 137 RSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-EIQALSNAVLRD----------------- 198 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-cccccchhHHHH-----------------
Confidence 99999999999999999899999999887766555444333221111100 000000 00000
Q ss_pred cccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhH-HHhhHHHHHhhcC-
Q 039943 270 EEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPL-WSTGIMIAVTISQ- 347 (581)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 347 (581)
..+.. ....+.+.....+.. .............
T Consensus 199 --------------------~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (365)
T TIGR00900 199 --------------------TREGI-------------------------KFVLKNPLLRTLLLLALLFNLVFAPAIVAL 233 (365)
T ss_pred --------------------HHhHH-------------------------HHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000001111111111 1111111111111
Q ss_pred CChhheecccCCCCCCCCcccCcccccch---hhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 039943 348 SSFPVLQASTMDRHITPNFEIPSGSFGIF---TIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMA 424 (581)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~ 424 (581)
.+.+..+... .+....+.. ..+..++...+ ..++.+|.++| +.+..+.++.++++.
T Consensus 234 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~-------~~~~~~~~~~~~~~~ 292 (365)
T TIGR00900 234 FPYVQSKYLG----------RGSTHYGWVLAAFGLGALLGALL----LGLLGRYFKRM-------ALMTGAIFVIGLAIL 292 (365)
T ss_pred hHHHHHHHhC----------CchHHHHHHHHHHHHHHHHHHHH----HHHHHHHhchh-------HHHHHHHHHHHHHHH
Confidence 2332221111 111112211 12222222222 22344554333 455555555555555
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHH
Q 039943 425 AWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASL 504 (581)
Q Consensus 425 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 504 (581)
...... + +.+...+..++.+++.+...+....++.+.+|++.|+++.|+.+....++..
T Consensus 293 ~~~~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 293 VVGLTP--------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred HHHhhc--------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 444321 1 2455566778888898888999999999999999999999999999999999
Q ss_pred HHHHHHHhhhh
Q 039943 505 VASFIMNAVDE 515 (581)
Q Consensus 505 i~~~i~~~i~~ 515 (581)
+++.+.+.+.|
T Consensus 352 ~g~~~~g~l~~ 362 (365)
T TIGR00900 352 LGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHH
Confidence 99999998876
No 37
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=5.1e-22 Score=213.50 Aligned_cols=149 Identities=16% Similarity=0.089 Sum_probs=128.0
Q ss_pred HHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccc
Q 039943 51 LYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSD 130 (581)
Q Consensus 51 ~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (581)
+.+.+++|++.++.+++.+.+.++..++.++.|+++|| +|||++++.+.++..++.+++++++
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 44567999999999999999999999999999999999 7999999999999999998888877
Q ss_pred cccccchhHHHHHH-HHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccc
Q 039943 131 CESATWSQLMLLYS-ALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNL 209 (581)
Q Consensus 131 ~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~ 209 (581)
+.+.+++ .|++.|++.+...+...+++.+.++ ++|+++.++.+.+..+|..++|.+++++.+.+
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~--------~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY--------RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH--------hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 5666654 5788999998876777788888884 35999999999999999999999999999989
Q ss_pred cchhhhHHHHHHHHHHHHHHHh
Q 039943 210 GWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 210 g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
|||++|++.+++.+++.+..++
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877655544333
No 38
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=5e-22 Score=211.85 Aligned_cols=166 Identities=15% Similarity=0.202 Sum_probs=143.5
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITY 103 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (581)
+++.+....+..+.+.+..+.. .++.+++++++|+++.+.+++.+++.++..++.++.|+++|| +|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHH
Confidence 3444555555555555555443 455567788999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++..+++++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|+++
T Consensus 94 ~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~-------~~r~~~ 143 (426)
T PRK12307 94 SVGTGLSGLAS-----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPK-------HLKSKA 143 (426)
T ss_pred HHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH-------hHhhHh
Confidence 99999998887 788899999999999999999999999999998 679999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHH
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVI 221 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~ 221 (581)
.++...+..+|..+++.+.+.+.+..+||+.|++.++.
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999999998889999999875543
No 39
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=4.9e-21 Score=201.31 Aligned_cols=173 Identities=12% Similarity=0.173 Sum_probs=149.1
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+.++.+.+..+......+...+.+|. +++++|++.++.+++.+++.++..+++++.|+++|| +|||+++..+.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHH
Confidence 34555666666666666666666654 567899999999999999999999999999999999 6999999999999999
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+++++++ +++.+++.|++.|++.+...+...+++.|++|+ ++|++..+
T Consensus 81 ~~~l~~~~~-----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 130 (382)
T PRK10091 81 GNAMFTLSS-----------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP-------GKVTAAVA 130 (382)
T ss_pred HHHHHHHhC-----------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh-------HHhhHHHH
Confidence 999999887 788999999999999999888888999999887 66899999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+...+..+|..++|.+++++.+..+||+.|++.++..++..+...
T Consensus 131 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 131 GMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999989999999998876655544433
No 40
>PRK09952 shikimate transporter; Provisional
Probab=99.90 E-value=2.5e-21 Score=207.28 Aligned_cols=177 Identities=15% Similarity=0.151 Sum_probs=131.9
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhc--CCcchhhHHHH-----HHHHHHHHHHHHHHHHhhccccCchhhH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGEY--NMETTAGTNVL-----LIWTAATNFLPIIGAFLADSCVGRYPMI 96 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~s~~~~~~i~-----~~~~~~~~i~~~~~G~laDr~~Grr~~~ 96 (581)
++|.+....+..+++.+....+....+.++.+++ +.++.+ +++. ++..++..++.++.|+++|| +|||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHHHH
Confidence 3455666666777777776655555555666655 677664 4443 23445566888889999999 6999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCccc
Q 039943 97 GFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKS 176 (581)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 176 (581)
..+.+++.++.+++++++++.. ....+...+++.|+++|++.|+..|...+++.|++|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~------ 156 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFST---------------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPK------ 156 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHH---------------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCC------
Confidence 9999999999999999873211 0001123688899999999999999999999999998
Q ss_pred chhhhHHHHHHHHHHhhHHHHHHHHHHhhh--------ccccchhhhHHHHHHHHH
Q 039943 177 KGALQSYFSWYYVSVLASSMVAVTCIVYIQ--------DNLGWKVGFGVPAVISLL 224 (581)
Q Consensus 177 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~--------~~~g~~~~f~~~~~~~~i 224 (581)
++|+...+....+..+|..++..+..++. +.+|||++|++.++..++
T Consensus 157 -~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 157 -NKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 56898888888888888888877666654 357999999987765443
No 41
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=4.4e-22 Score=207.57 Aligned_cols=152 Identities=19% Similarity=0.122 Sum_probs=132.3
Q ss_pred hHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 039943 47 PNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ 126 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
+...+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++.+++++++
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~~~------------ 89 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAIAD------------ 89 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHHHH------------
Confidence 445567888999999999999999999999999999999999 7999999999999999999999988
Q ss_pred cccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 127 LRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
+.+.+++.|++.|++.+...+.....+.|.+|+ +|+++.++...+.++|..+++.+.+.+.
T Consensus 90 -----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (377)
T TIGR00890 90 -----------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD--------KRGLASGIIIGGYGLGSFILSPLITSVI 150 (377)
T ss_pred -----------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc--------ccHHHHHHHHHhcchhHhHHHHHHHHHH
Confidence 788899999999999998888888888888764 4899999999999999888777777777
Q ss_pred ccccchhhhHHHHHHHHHHHHHHH
Q 039943 207 DNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 207 ~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+..|||+.|++.++..++..+...
T Consensus 151 ~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 151 NLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHH
Confidence 778999999998877665554443
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=1.4e-21 Score=211.84 Aligned_cols=173 Identities=15% Similarity=0.192 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+..+.+..++..+... +.....+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+++..+.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDST-IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHH
Confidence 3344444555555443 34444556678999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+++++++ ++..+++.|+++|++.+...+...+++.|.+|+ ++|+++.+++
T Consensus 82 ~~~~~~~-----------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~ 131 (485)
T TIGR00711 82 LLCGVAP-----------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP-------EKRGRAMAIW 131 (485)
T ss_pred HHHhCcC-----------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH-------HHHHHHHHHH
Confidence 9998877 788899999999999999999999999999998 7799999999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
+....+|..++|.+++++.++++|++.|++.++..++..+...+.
T Consensus 132 ~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 132 GLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred HHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999877666555444433
No 43
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=1.3e-21 Score=206.47 Aligned_cols=173 Identities=13% Similarity=0.152 Sum_probs=148.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHH
Q 039943 22 KGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCI 101 (581)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (581)
+.+|+.+....+..+.+.+..+.+....+ .+++++|++..+.+++.+++.++..++.++.|+++|| +|||++++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 45566666666777777776665555444 6678999999999999999999999999999999999 699999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+.+++.+++.+++ +++.+++.|++.|++.+...+...+++.|.+|+ ++|+
T Consensus 86 ~~~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~~~ 135 (405)
T TIGR00891 86 LFSAGTLACGFAP-----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK-------HLRN 135 (405)
T ss_pred HHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh-------hhhh
Confidence 9999998888877 788899999999999999999999999999998 6699
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhcccc--chhhhHHHHHHHHHHH
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLG--WKVGFGVPAVISLLSA 226 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g--~~~~f~~~~~~~~i~~ 226 (581)
++.++.+.+..+|..+++.+++.+.+..+ |++.|++.++..++.+
T Consensus 136 ~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 136 KASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998887665 9999987665544443
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=1.9e-21 Score=211.58 Aligned_cols=169 Identities=12% Similarity=0.151 Sum_probs=145.2
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 23 GGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
.+|+.+..+.+..++..+....+ ..+.+++.+++|++..+.+++.+.+.++..++.++.|+++|| +|||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLI-TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 44555555666666666655444 444456778999999999999999999999999999999999 6999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
.+++.+++.++. +++.+++.|++.|++.+...+...+++.|.+|+ ++|++
T Consensus 95 ~~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~ 144 (496)
T PRK03893 95 FSVGTLACGFAP-----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK-------HLRNK 144 (496)
T ss_pred HHHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHH
Confidence 999999988887 788899999999999999999999999999998 77999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISL 223 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~ 223 (581)
..++.+.+.++|..++|.+.+++.+.++|++.|++.++..+
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987544433
No 45
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=2.6e-21 Score=208.91 Aligned_cols=147 Identities=11% Similarity=0.101 Sum_probs=130.1
Q ss_pred hcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccccccccccc
Q 039943 56 EYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESAT 135 (581)
Q Consensus 56 ~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (581)
+++++..+.+++.+.+.+++.++++++|+++|| +|||+++..+.++..++.+++.++.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~--------------------- 127 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAA--------------------- 127 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHH---------------------
Confidence 689999999999999999999999999999999 7999999999999888887776543
Q ss_pred chhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccc-cchhh
Q 039943 136 WSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNL-GWKVG 214 (581)
Q Consensus 136 ~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~-g~~~~ 214 (581)
..+...+++.|+++|++.+...|....+++|++|+ ++|+++.++.+.+.++|..++|++++++.+.. ||++.
T Consensus 128 ~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 128 GGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP-------KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred HcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 11467789999999999999999999999999998 67999999999999999999999999999884 99999
Q ss_pred hHHHHHHHHHHHHHHHh
Q 039943 215 FGVPAVISLLSALSFFL 231 (581)
Q Consensus 215 f~~~~~~~~i~~~~~~~ 231 (581)
|++.++..++..+.++.
T Consensus 201 f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFV 217 (465)
T ss_pred hhhhhHHHHHHHHHHHH
Confidence 99988876665554444
No 46
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=4.8e-22 Score=205.50 Aligned_cols=166 Identities=19% Similarity=0.293 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHH
Q 039943 32 IANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLW 111 (581)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 111 (581)
++..++..+......+.++.++.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++..+.++.+++..++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhh
Confidence 345556666666666667668888999999999999999999999999999999999 7999999999999999966666
Q ss_pred HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHH
Q 039943 112 LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSV 191 (581)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (581)
+++ +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.+++.+...
T Consensus 81 ~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~ 130 (352)
T PF07690_consen 81 FAS-----------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPP-------EERGRAFGILSAGF 130 (352)
T ss_dssp HHC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT-------CCHHHHHHHHHHHH
T ss_pred hhh-----------------------hHHHHhhhccccccccccccccccccccccchh-------hhhhhccccccchh
Confidence 654 556899999999999999999999999999998 56999999999999
Q ss_pred hhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 192 LASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 192 ~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
++|..++|.+++++.+..+|++.|++.++..++..+.
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 9999999999999998899999999998887777654
No 47
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=3.7e-21 Score=208.00 Aligned_cols=173 Identities=9% Similarity=0.019 Sum_probs=134.1
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+.+....+..++..+..+...+.+ +++.+++|++.++.+++.+.+.+++.++++++|+++|| +|||+++..+.++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH
Confidence 334444444445555555544444 46678999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+++++++ +...+++.|++.|++.+... ....+++|++|+ ++|+++++
T Consensus 114 ~~~~~~~~~-----------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~-------~~rg~a~g 162 (476)
T PLN00028 114 AVFCMSLVS-----------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNG-------KIVGTANG 162 (476)
T ss_pred HHHHHHHhc-----------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcCh-------hheeHHHH
Confidence 988888877 67788889999999988754 355678999998 67999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhc---------cccchhhhHHHHHHHHHHHHHHHh
Q 039943 186 WYYVSVLASSMVAVTCIVYIQD---------NLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~---------~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+.+...++|..+++.+.+.+.. ..|||+.|++.+++.++..+...+
T Consensus 163 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 163 IAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9888778888877766655422 248999999988876655444433
No 48
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=1.7e-20 Score=196.79 Aligned_cols=175 Identities=15% Similarity=0.135 Sum_probs=147.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
.|.++.+.+..+...++.....+.+| .+.+++|.+.++.+++.+++.++..++.++.|+++|| +|||+++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHH
Confidence 34444444444445555444444444 5667899999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.+++.+++ +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.+
T Consensus 82 ~~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 131 (385)
T TIGR00710 82 LSSLGLALSN-----------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPG-------EELSRIY 131 (385)
T ss_pred HHHHHHHHHc-----------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc-------HHHHHHH
Confidence 9999888877 778899999999999999999999999999997 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
++.+....+|..++|.+++++.+..+|++.|++.++..++..+...+
T Consensus 132 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 132 SILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999899999999887766655544443
No 49
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.9e-22 Score=204.74 Aligned_cols=180 Identities=13% Similarity=0.171 Sum_probs=161.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHH
Q 039943 22 KGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCI 101 (581)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (581)
+..++.+..+.+.++++++.-|.+...+ .-.++.+|+++++.|++..++.+..+++.|+.|+++|| +.||+++.+|.+
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeHHH
Confidence 3445556777788888888888776644 46778999999999999999999999999999999999 699999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
++.++.+..+++. .++++.+.|.+.|+|.+.+.|.++++++|.||. .+|+
T Consensus 107 iW~~Av~~~~fs~-----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~-------~~Rs 156 (493)
T KOG1330|consen 107 IWTLAVFASGFSN-----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD-------DKRS 156 (493)
T ss_pred HHHHHHHHHHHHH-----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcc-------hhhh
Confidence 9999999999998 899999999999999999999999999999998 7799
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHHHHhcC
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
+.++++|++..+|.++|.+++..+.+..+ |||+|.+.+++.++..++.++..
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 99999999999999999999999988766 99999999998877766555543
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=1.2e-20 Score=199.06 Aligned_cols=164 Identities=20% Similarity=0.188 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
..+.+.+..++..++.......++.. .++++.+..+.+++.+.+.+.+.++.+++|+++|| +||||+++++.++++++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHHH
Confidence 34556666777777655555555554 57899999999999999999999999999999999 79999999999999988
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.+.+.++. +. ++.|+++|++.+...|+..+++.|++|+ ++|+++.++
T Consensus 82 ~~~~~~~~-----------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~-------~~~~~a~~~ 128 (393)
T PRK11195 82 CLLMLFGI-----------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPG-------EKLVKANGW 128 (393)
T ss_pred HHHHHHHH-----------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHHH
Confidence 88776655 32 6789999999999999999999999998 779999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSA 226 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~ 226 (581)
.....++|..+||.++|++.+. .|+..+.+.+...+++.
T Consensus 129 ~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 129 MEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999874 47767666555444443
No 51
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=3.5e-21 Score=198.46 Aligned_cols=346 Identities=16% Similarity=0.216 Sum_probs=250.8
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHH
Q 039943 30 FIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVL 109 (581)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 109 (581)
.+.+..++..+..+...+..+.|. +++|.+..+.+++.+...++..++.++.|+++|| +|||+.+..+.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHH
Confidence 345566677777777777777776 4679999999999999999999999999999999 79999999999999999999
Q ss_pred HHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHH
Q 039943 110 LWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYV 189 (581)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (581)
+.+.+ +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.+++.+.
T Consensus 81 ~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 130 (352)
T cd06174 81 LAFAS-----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP-------KERGRALGLFSA 130 (352)
T ss_pred HHHhc-----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCc-------cchhhhhhHHHH
Confidence 88876 788899999999999999999999999999998 569999999999
Q ss_pred HHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccCccc
Q 039943 190 SVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTT 269 (581)
Q Consensus 190 ~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (581)
..++|..++|.+++++.+..+|++.|++.++..++..+...+.. +
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---------------------- 175 (352)
T cd06174 131 GFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------R---------------------- 175 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------H----------------------
Confidence 99999999999999999988999999988877666655443321 0
Q ss_pred cccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-C
Q 039943 270 EEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-S 348 (581)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 348 (581)
..................+.. .
T Consensus 176 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 198 (352)
T cd06174 176 ---------------------------------------------------------LLLLLALAFFLLSFGYYGLLTYL 198 (352)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHHhHHHHHHHHH
Confidence 000000000000000011111 1
Q ss_pred ChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchH-HHHHHHHHHHHHHHHHH
Q 039943 349 SFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQ-RMGIGLLFSTASMAAWA 427 (581)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~-~~~~g~~~~~~~~~~~~ 427 (581)
+.+..+..+.+.. ..........+...+..++ ..++.+|.++| + .+..+..+..++.....
T Consensus 199 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 199 PLYLQEVLGLSAA-------EAGLLLSLFGLGGILGALL----GGLLSDRLGRR-------RLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHhcCCCHH-------HHHHHHHHHHHHHHHHHHH----HHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHH
Confidence 1111111000000 0111222233333333333 33466776655 3 56677777777766555
Q ss_pred HHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHH
Q 039943 428 ITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVAS 507 (581)
Q Consensus 428 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~ 507 (581)
... +.+......++.+++.+...+....++.+..|++.|++..|+.+....+++.+++
T Consensus 261 ~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 318 (352)
T cd06174 261 LAP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGP 318 (352)
T ss_pred Hhc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 421 3556677788899999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 039943 508 FIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLA 555 (581)
Q Consensus 508 ~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~ 555 (581)
.+.+.+.+.. ++...|++.+++.+++.+..+.
T Consensus 319 ~i~g~l~~~~----------------~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 319 LLAGLLLDTG----------------GYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHhccc----------------CcchHHHHHHHHHHHHHHHhee
Confidence 9999887522 2366788888888877766543
No 52
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=6.1e-21 Score=201.50 Aligned_cols=173 Identities=13% Similarity=0.086 Sum_probs=143.5
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITY 103 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (581)
++|..+...+..++.......+-..+|. +.+++|+|.++.+++.+.+.+++.++.++.|+++|| +|||+++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence 3455566656666666655545455554 567899999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++.+++.+++ +++.+++.|++.|++.|...+...+++.|.+|+ ++|++.
T Consensus 83 ~i~~~l~~~~~-----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~ 132 (394)
T PRK03699 83 ILAVAGLMFSH-----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEG-------KQRGSR 132 (394)
T ss_pred HHHHHHHHHcc-----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhccc-------chHHHH
Confidence 99999888877 788899999999999999999999999999987 569999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhc-cccchhhhHHHHHHHHHHHHH
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQD-NLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~-~~g~~~~f~~~~~~~~i~~~~ 228 (581)
.+..+....+|+.++|.+.+++.. ..|||+.|.+.++..++..+.
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 133 LLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 988888888999999998888754 579999999877765554433
No 53
>TIGR00898 2A0119 cation transport protein.
Probab=99.89 E-value=3.1e-21 Score=210.45 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=129.9
Q ss_pred HHhhhhcCCc---chhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 039943 51 LYLCGEYNME---TTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQL 127 (581)
Q Consensus 51 ~yl~~~~~~s---~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (581)
+.+.++++++ ..+.+++.+++.++..++.++.|+++|| +|||++++++.++..++.++.++++
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3466789999 8999999999999999999999999999 7999999999999999999988887
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 128 RSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
+++.+++.|++.|++.++..+...+++.|.+|+ ++|+...++...+..+|..++|.++..+.+
T Consensus 179 ----------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 179 ----------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPK-------KQRAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred ----------cHHHHHHHHHHHHhhccchHHHHHHHhheecCh-------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 788999999999999999999999999999998 669999999888889999999988776643
Q ss_pred cccchhhhHHHHHHHHHHHHHHHh
Q 039943 208 NLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
||+.|++.++..++..+..++
T Consensus 242 ---wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 242 ---WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHh
Confidence 999999888776665554433
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=1.4e-20 Score=197.89 Aligned_cols=156 Identities=10% Similarity=0.018 Sum_probs=137.9
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
.|.++.+++..++..++...+.+.+|.|+. ++|.|..+.|++.+.+.++..+++++.|+++|| +|||+++..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHH
Confidence 345778888888888888778888888876 789999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++...+++++ +++.+++.|++.|++.+...|...+.+.+..++ ++|++.+
T Consensus 83 ~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 132 (381)
T PRK03633 83 AGCAGLGLMV-----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS-------RNRGRLL 132 (381)
T ss_pred HHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHH
Confidence 9998888877 788899999999999999888888888888877 6699999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccch
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWK 212 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~ 212 (581)
+.++.+.++|..+||.+++++.+...+.
T Consensus 133 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 133 AAYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccch
Confidence 9999999999999999999987754333
No 55
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=1.8e-20 Score=197.91 Aligned_cols=174 Identities=13% Similarity=0.121 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHH-HHHHHHHHHHHhhccccCchhhHH-HHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTA-ATNFLPIIGAFLADSCVGRYPMIG-FGCITYLL 105 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~-~~~~~~~~ 105 (581)
.+..++..++..+....+.+.++.|+++++|.+.++.|++.+...+ +..++++++|+ +|| +||||.++ .+.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHHHHHHHHHH
Confidence 4556666888888888888999999999999999999999876655 55566666666 999 69998754 45555556
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+..+.++++ +++.+++.+.+.+...+...|...++..|..++++ +..+...+
T Consensus 95 ~~~~~~~~~-----------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 146 (393)
T PRK15011 95 ACTLFAWNR-----------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG-----REAVMFSS 146 (393)
T ss_pred HHHHHHHhh-----------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc-----chHHHHHH
Confidence 666666666 56665554444444445667888888888665522 12234456
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+.+.+.++|..+||.+++++.++.|||..|++.++..++..+...+
T Consensus 147 ~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 147 FLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 7888899999999999999999899999999888766655544443
No 56
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.89 E-value=4.1e-20 Score=195.73 Aligned_cols=170 Identities=12% Similarity=0.107 Sum_probs=139.5
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 23 GGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
..||.+....+..++..+..+...+++++++ +++|++.++.+++.+.+.++..++.++.|+++|| +||||++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHH
Confidence 3356777778888888888877788888888 5789999999999999999999999999999999 7999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
..++.+++..... ...+.+.+++.|++.|++.+...+...+.+.+.+|+ ++|++
T Consensus 88 ~~~~~~~~~~~~~-------------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~-------~~~g~ 141 (402)
T TIGR00897 88 WCVGHAAFIVFGL-------------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ-------DNLSS 141 (402)
T ss_pred HHHHHHHHHHHhc-------------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH-------HHHHH
Confidence 8888765532110 011567788899999999888878788888898887 67999
Q ss_pred HHHHHHHHHhhHH-HHHHHHHHhhhccccchhhhHHHHH
Q 039943 183 YFSWYYVSVLASS-MVAVTCIVYIQDNLGWKVGFGVPAV 220 (581)
Q Consensus 183 ~~~~~~~~~~~g~-~~~p~~~~~i~~~~g~~~~f~~~~~ 220 (581)
+.++.+.+.++|. .++|++++++.+..||+..++....
T Consensus 142 ~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 142 AVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999996 5899999999888887666555443
No 57
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=9.6e-20 Score=193.44 Aligned_cols=148 Identities=16% Similarity=0.203 Sum_probs=132.9
Q ss_pred HhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccccccc
Q 039943 52 YLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDC 131 (581)
Q Consensus 52 yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (581)
.+.+++|.+.++.++..+++.+++.+++++.|+++|| +|||++++.+.+++.++.+++.+++
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~----------------- 102 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTT----------------- 102 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcC-----------------
Confidence 3677999999999999999999999999999999999 7999999999999999999998887
Q ss_pred ccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccc
Q 039943 132 ESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGW 211 (581)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~ 211 (581)
+++.++++|+++|++.+...+...+++.|.+|+ ++|++.+++.....++|..+||++++++.++.||
T Consensus 103 ------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 103 ------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQ-------TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 788899999999999987777778889999988 6689999999999999999999999999988899
Q ss_pred hhhhHHHHHHHHHHHHHHH
Q 039943 212 KVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 212 ~~~f~~~~~~~~i~~~~~~ 230 (581)
|+.|++.++..+++.+...
T Consensus 170 ~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998887666655433
No 58
>TIGR00895 2A0115 benzoate transport.
Probab=99.89 E-value=1.2e-20 Score=198.37 Aligned_cols=172 Identities=17% Similarity=0.138 Sum_probs=142.6
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
|+.+....+..+......+ ...+..+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHH
Confidence 3334444444444444443 33444556677899999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.+++.++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++..
T Consensus 94 ~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~ 143 (398)
T TIGR00895 94 VFTLLCALAT-----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK-------RFRGTAV 143 (398)
T ss_pred HHHHHHHHcc-----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCH-------HhhchhH
Confidence 8888888776 677889999999999999999999999999988 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
++...+..+|..++|.+++++.+..||++.|++.+++.++..+.
T Consensus 144 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 144 GLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred hhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH
Confidence 99999999999999999999999899999999886554444433
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=5.5e-21 Score=204.72 Aligned_cols=156 Identities=13% Similarity=0.056 Sum_probs=129.0
Q ss_pred HHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 039943 48 NMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQL 127 (581)
Q Consensus 48 ~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (581)
...+++++ +|++.++.+++.+++.++..++.++.|+++|| +|||+++..+.++..++.+++.+.++..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVPWAT---------- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhcccccc----------
Confidence 34456765 59999999999999999999999999999999 7999999999999888887776653111
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh-
Q 039943 128 RSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ- 206 (581)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~- 206 (581)
.+...+++.|++.|++.|...+.....+.|++|+ ++|+++.++++.+.++|..++|.+.+...
T Consensus 116 ---------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~-------~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 116 ---------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQ-------SERGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred ---------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCc-------ccchhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 1566778889999999999999899999999988 66999999999999999999988777644
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHh
Q 039943 207 DNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 207 ~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+..+||+.|++.+++.++..+...+
T Consensus 180 ~~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 180 WFNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4569999999988876665444433
No 60
>PRK15075 citrate-proton symporter; Provisional
Probab=99.88 E-value=2.7e-20 Score=199.17 Aligned_cols=172 Identities=13% Similarity=0.103 Sum_probs=127.1
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHH-HHHHH-----HHHHHHHHHHHhhccccCchhhHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVL-LIWTA-----ATNFLPIIGAFLADSCVGRYPMIGF 98 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~-~~~~~-----~~~i~~~~~G~laDr~~Grr~~~~~ 98 (581)
++......+..+++.+.... ...+.+.+.++++.+.++.+... +...+ ...+++++.|+++|| +|||++++.
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFL-FGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHH
Confidence 34445555566666665544 44555578889999887765443 32222 224678999999999 799999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccch
Q 039943 99 GCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKG 178 (581)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (581)
+.+++.++.+++++++++... .......+++.|+++|++.+...+...++++|++|+ +
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~---------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-------~ 149 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATI---------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP-------G 149 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHH---------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc-------c
Confidence 999999999999998721100 000012578899999999999999999999999998 6
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHhhh--------ccccchhhhHHHHH
Q 039943 179 ALQSYFSWYYVSVLASSMVAVTCIVYIQ--------DNLGWKVGFGVPAV 220 (581)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~p~~~~~i~--------~~~g~~~~f~~~~~ 220 (581)
+|++..++.....++|..+++.+++.+. +.+|||++|++.++
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 6999999988888888888887777652 46899999987544
No 61
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=2.7e-20 Score=203.20 Aligned_cols=424 Identities=12% Similarity=0.111 Sum_probs=254.0
Q ss_pred hhhhHHHHHhhhhc-----CCcc--hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhc
Q 039943 44 GLMPNMILYLCGEY-----NMET--TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTIL 116 (581)
Q Consensus 44 ~~~~~l~~yl~~~~-----~~s~--~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 116 (581)
+....+...+++.. ..+. .+.+++.++..++..++.++.|+++|+ +|||++++++.+++.+|.++++++.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 45555555555422 1222 344899999999999999999999999 7999999999999999999999998
Q ss_pred ccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHH
Q 039943 117 SQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSM 196 (581)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 196 (581)
+...++++|++.|+|.|+.....+.+++|..|+ +.|+...+..+...++|..
T Consensus 141 ---------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~-------~~RG~l~~~~~l~~~~Gi~ 192 (513)
T KOG0254|consen 141 ---------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPA-------HIRGTLVSLYQLFITIGIL 192 (513)
T ss_pred ---------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCCh-------hhhHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999998 7799999999999999999
Q ss_pred HHHHHHHhhhcc--ccchhhhHHHHHHHHHHHHHHHhcC--CcccccCCCCChhhhHHHHHHHHHhhccccccCcccccc
Q 039943 197 VAVTCIVYIQDN--LGWKVGFGVPAVISLLSALSFFLAS--PFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEM 272 (581)
Q Consensus 197 ~~p~~~~~i~~~--~g~~~~f~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (581)
++..+ ++..++ ++||..+.+..+..++..+.+++.+ |++..++.+. .+..+.+....... +.+.+.+.
T Consensus 193 ~~~~~-~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~---~~a~~~l~~l~g~~----~~~~~~~~ 264 (513)
T KOG0254|consen 193 LGYCI-NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRL---EEAKRSLKRLRGLS----PEDVEVEL 264 (513)
T ss_pred HHHHH-hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCCh---HHHHHHHHHHhCCC----CcchHHHH
Confidence 99644 444443 4899888887776665555533322 2221111111 11111111111100 00000000
Q ss_pred ccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-CChh
Q 039943 273 YHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-SSFP 351 (581)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 351 (581)
.+ .. .+........+. ...|..+.. ....|+.+..+.+..++......... ....
T Consensus 265 ~~-------------~~-~~~~~~~~~~~~--------~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~ 320 (513)
T KOG0254|consen 265 EL-------------LK-IKLLVEAEVAEG--------KASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTT 320 (513)
T ss_pred HH-------------HH-HHHHHhhhcccc--------cccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHH
Confidence 00 00 000000000000 001111111 11233344333333333332221111 1111
Q ss_pred heecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 039943 352 VLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITET 431 (581)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 431 (581)
..+....... . .......+.++....++ ...+.||.||| ..+..|...+.+++++.+....
T Consensus 321 if~~~g~~~~---~-~~~~~~~~~v~~~~t~~--------~~~lvd~~gRr-------~lll~s~~~m~~~~~~~~~~~~ 381 (513)
T KOG0254|consen 321 IFKSAGLKSD---T-FLASIILGVVNFLGTLV--------ATYLVDRFGRR-------KLLLFGAAGMSICLVILAVVGV 381 (513)
T ss_pred HHHhcCCCCc---h-HHHHHHHHHHHHHHHHH--------HHHHHHHhccH-------HHHHHhHHHHHHHHHHHHHHHH
Confidence 1111111100 0 01111111222222222 23477787777 4788888888888887776543
Q ss_pred HHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039943 432 VRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMN 511 (581)
Q Consensus 432 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~ 511 (581)
...+.... .....++.+...+++.........|..+.+..|.+|.+.|+.+.++...++++.+.+.....+
T Consensus 382 ~~~~~~~~---------~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 382 FALYYPNS---------SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred HhccCCCc---------ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 21110000 112344444555556666667777888889999999999999999999999999998877666
Q ss_pred hhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHH-HHhhhhccccccccchhhhhhhc
Q 039943 512 AVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFI-YFLACCKAYGPCREEASEALDEK 574 (581)
Q Consensus 512 ~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 574 (581)
.+....+ ....|..+++++.+... +++++.+|+|+++.||.+...++
T Consensus 453 ~~~~~~~----------------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 453 FITEALG----------------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHhcc----------------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 5553210 13457777777777777 88999999999999998776544
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.88 E-value=9.8e-20 Score=192.19 Aligned_cols=174 Identities=19% Similarity=0.253 Sum_probs=145.4
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 23 GGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
+.+|.++...+...+..+......+.+| ++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHH
Confidence 3456666666666666666554555554 4557899999999999999999999999999999999 7999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
..++.+.+.+++ +.+.+++.|++.|++.+...+....+..|.+++ +++++
T Consensus 83 ~~~~~~~~~~~~-----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~ 132 (394)
T PRK11652 83 FILGTLVALFAH-----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG-------TQLRH 132 (394)
T ss_pred HHHHHHHHHHHc-----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH-------HHHHH
Confidence 999988888776 678899999999999988888888888898877 56888
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
..++...+..++..++|.+++++.+..||++.|++.++..++..+.
T Consensus 133 ~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 133 ANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999999998889999999877665544433
No 63
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=6.4e-20 Score=194.11 Aligned_cols=162 Identities=15% Similarity=0.158 Sum_probs=136.8
Q ss_pred HHHHHhhhhhHHHHH--hhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhh
Q 039943 38 ERMASMGLMPNMILY--LCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTI 115 (581)
Q Consensus 38 ~~~~~~~~~~~l~~y--l~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 115 (581)
....++....++|.+ +++++|.+.++.+++.+++.++..++.++.|+++|| +|||+++..+.++..++.+++.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVE- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 334444444444433 678999999999999999999999999999999999 7999999999999998888888877
Q ss_pred cccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHH
Q 039943 116 LSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASS 195 (581)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (581)
+++.+++.|++.|++.+...+...+++.|.+|+ +++.+.++......++|.
T Consensus 93 ----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 93 ----------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA-------QKANRVFATIMPLVALSP 143 (401)
T ss_pred ----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHHH
Confidence 778889999999999888888888999999987 568888888888888999
Q ss_pred HHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 196 MVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 196 ~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
.++|.+++++.+..||++.|++.++..++..+..+
T Consensus 144 ~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 144 ALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988776665554433
No 64
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=1.5e-19 Score=190.16 Aligned_cols=364 Identities=11% Similarity=-0.022 Sum_probs=224.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH-HHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT-YLLGV 107 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~-~~~~~ 107 (581)
+.+.+..++...++....+++|.|++ ++|+|.++.+++.+++.+...+++++.|.++|| +||++.....+.+ ..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHH
Confidence 33444555555555556788888885 789999999999999999999999999999999 6985433222111 11111
Q ss_pred -HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 108 -VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 108 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.++..++ +++.+++.|++++.+.+...|...++..+. . ++|++.++.
T Consensus 85 ~~~~~~~~-----------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~-------~~~~~~~g~ 132 (382)
T TIGR00902 85 AAFSAGAH-----------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--Q-------KQFGLDYGK 132 (382)
T ss_pred HHHHHhhh-----------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--H-------HHcCCCccH
Confidence 2222344 688899999999999988889888886553 2 458888999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccC
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSS 266 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (581)
.....++|.+++|++++++.+.+||+..|++.+...++.++. ....++. +++++..+ +
T Consensus 133 ~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-----------------~- 190 (382)
T TIGR00902 133 VRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIG-FLIKPTI---PPKDAIPE-----------------D- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHcCCCC---CCCccccc-----------------c-
Confidence 999999999999999999999999999988765543322222 2222111 11100000 0
Q ss_pred ccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhH-hHHHhhHHHHHhh
Q 039943 267 QTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVI-PLWSTGIMIAVTI 345 (581)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 345 (581)
+ . ...+. .....+.++..... ..++........+
T Consensus 191 -~----------------~--------------------------~~~~~--~~~~l~~~~~~~~l~~~~l~~~~~~~~~ 225 (382)
T TIGR00902 191 -E----------------S--------------------------QGDSA--FIALLKNPMNLRFLAAVCLIQGAHAAYY 225 (382)
T ss_pred -c----------------c--------------------------ccchh--HHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000 00000111111111 1111122221211
Q ss_pred cCCChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 039943 346 SQSSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAA 425 (581)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~ 425 (581)
...+.++.. . + .+....+....+..+ ...+ ...+.+|+.+| .+.++.+.++.+..++....
T Consensus 226 ~~~~~~l~~-~------g----~s~~~~g~l~~~~~~-~~i~----~~~~~~~l~~r---~g~~~~l~~~~~~~~~~~~~ 286 (382)
T TIGR00902 226 GFSAIYWQA-A------G----ISASATGLLWGIGVL-AEII----IFAFSNKLFQN---CSARDLLLISAIACVGRWAI 286 (382)
T ss_pred HHHHHHHHH-C------C----CCHhHHHHHHHHHHH-HHHH----HHHHhHHHHhh---CCHHHHHHHHHHHHHHHHHH
Confidence 112222211 1 1 222222222222111 1111 22234444444 56667888888888888776
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHH-HHHHHHHH
Q 039943 426 WAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHG-LGMSVASL 504 (581)
Q Consensus 426 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~ 504 (581)
....+ +.+.++...++.++..+...+....++.+. |++.+++++++++ ....+|.+
T Consensus 287 ~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~ 343 (382)
T TIGR00902 287 IGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIA 343 (382)
T ss_pred HHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHH
Confidence 65532 456666678999999999999999999888 9999999999986 56779999
Q ss_pred HHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHH
Q 039943 505 VASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIY 552 (581)
Q Consensus 505 i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~ 552 (581)
+++.+.|.+.|..+ ...|+..+++.+++.++
T Consensus 344 ~g~~~~G~l~~~~g-----------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 344 IFTAFAGFIYPTLG-----------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHhcc-----------------HHHHHHHHHHHHHHHHH
Confidence 99999999987431 24577778777766544
No 65
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.88 E-value=2.2e-20 Score=198.95 Aligned_cols=394 Identities=9% Similarity=0.032 Sum_probs=221.5
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+..+...+..++..++++...++++.|+++++|++..+.+++.+++.++..+++++.|+++|| +|||++++++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH
Confidence 455666667777778777889999999999999999999999999999999999999999999 7999999887666555
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+..........+.. ........+.+.+..|.+.....+....+ .++.. ++++..++
T Consensus 89 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~g~~~g 144 (420)
T PRK09528 89 LFGPFFIYVFAPLL---------------QYNILLGAIVGGIYLGFGFLAGAGAIEAY----IERVS-----RRSGFEYG 144 (420)
T ss_pred HHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhhhhhccchhhhhhH----HHHHH-----hhccccch
Confidence 43322111100000 00011112233333443333333333333 22111 34667778
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcccccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLS 265 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (581)
..+...++|..++|.+++++.+ .+|++.|++.++..++.++..+...++.++++ +.+ ++. .+
T Consensus 145 ~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~--~~ 206 (420)
T PRK09528 145 RARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTA-KVA--------------NAL--GA 206 (420)
T ss_pred hhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchh-hhc--------------cch--hc
Confidence 8888889999999999999876 58999998887766655544433322211100 000 000 00
Q ss_pred CccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhh
Q 039943 266 SQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTI 345 (581)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (581)
+ + +.. ...+..... ..+.+.............+..+
T Consensus 207 --~--------~------~~~--~~~~~~~~l--------------------------~~~~~~~l~l~~~~~~~~~~~~ 242 (420)
T PRK09528 207 --N--------A------SAV--SLKDALALL--------------------------KLPKFWFLVLYVIGVACFYDVF 242 (420)
T ss_pred --c--------c------ccc--cHHHHHHHc--------------------------cCCCeEeehHHHHHHHHHHHHH
Confidence 0 0 000 000000000 0011111111111111111111
Q ss_pred cC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 039943 346 SQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMA 424 (581)
Q Consensus 346 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~ 424 (581)
.+ .+.++.+.. .+.. .+....+.+..+..+.. .+...+..++.||+++| +.+.++.++.++++.
T Consensus 243 ~~~~~~~~~~~~-~~~~------~~~~~~g~~~~~~~~~~-~~~~~~~g~l~dr~g~~-------~~~~~~~~l~~~~~~ 307 (420)
T PRK09528 243 DQQFPNFFASFF-ATPE------QGTRVFGYLNSFQVFLE-ALIMFFAPFIINRIGAK-------NALLLAGTIMAVRII 307 (420)
T ss_pred HHHHHHHHHHHH-hccC------cchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcc-------hhhHHHHHHHHHHHH
Confidence 11 222221111 0111 11111222222111111 11222344577776666 356666666666655
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHH-HHHHHHHHH
Q 039943 425 AWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASAL-HGLGMSVAS 503 (581)
Q Consensus 425 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~ 503 (581)
...... +.+++....++.+++.....+....++.+..|++.+++..+. +++...+|.
T Consensus 308 l~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 308 GSGFAT----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA 365 (420)
T ss_pred HHHhcc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence 554421 344555566777777777777777888888999999988765 677788999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 504 LVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 504 ~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
++++.+.+.+.|.. + ++..|.+.+++.++..++.++..++
T Consensus 366 ~ig~~~~G~l~~~~------G----------~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 366 VFLSTLAGNLYDSI------G----------FQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHhh------C----------chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999988743 2 4678888888887777666655443
No 66
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=7.9e-21 Score=198.23 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=135.6
Q ss_pred hHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 039943 47 PNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ 126 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
....+++.+++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++.+++.++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 334457888999999999999999999999999999999999 6999999999999999999998887
Q ss_pred cccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHH-HHHHhh
Q 039943 127 LRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAV-TCIVYI 205 (581)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p-~~~~~i 205 (581)
+.+.+++.|++.|++.+...+...+++.|.+|+ ++|++..++.+.+.++|..++| ++++.+
T Consensus 82 -----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (379)
T TIGR00881 82 -----------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSR-------SERGTWVSFWNCSHNVGGGLLPPLVLFGI 143 (379)
T ss_pred -----------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCH-------hhheeeEeehhccchhHHHHHHHHHHHHH
Confidence 788899999999999999999999999999998 6699999999999999999999 567777
Q ss_pred hccccchhhhHHHHHHHHHHHHHHHh
Q 039943 206 QDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 206 ~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+..+|++.|++.+++.++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 144 AELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 77789999998887766555444433
No 67
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=3.2e-20 Score=194.99 Aligned_cols=395 Identities=11% Similarity=0.077 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHH
Q 039943 65 TNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYS 144 (581)
Q Consensus 65 ~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (581)
+.+++++.+++++|.+++|+++|| +|||+.++++.++..++.+++.++... .+..+++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~~~~~~~~s~~~--------------------~~~e~li~ 121 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVLAALLMGLSKSA--------------------PSFEMLIL 121 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHHH
Confidence 566899999999999999999999 699999999999999988888887632 27899999
Q ss_pred HHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH--hhhccccchhhhHHHHHHH
Q 039943 145 ALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV--YIQDNLGWKVGFGVPAVIS 222 (581)
Q Consensus 145 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~--~i~~~~g~~~~f~~~~~~~ 222 (581)
+|++.|+..|......+.++.|..|+ +.||..-.+...+..+|..++.+++. .+.....|.+.+.+..+..
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP~-------~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISPK-------NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcChh-------hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999 77999999999999999999976653 2334456999988888877
Q ss_pred HHHHHHHHhcC--Cccccc-CCCCChhhhHHHHHHHHHhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccC
Q 039943 223 LLSALSFFLAS--PFYVQS-KANTSLLTGLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKH 299 (581)
Q Consensus 223 ~i~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (581)
++.++.+.+.+ |++.-. +.+.++.++..+.. +-+.+ +++.. ++.....+.....+
T Consensus 195 ~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y-------~G~~~--~~~~~-------------e~~~~e~~~~~~~~ 252 (485)
T KOG0569|consen 195 LLQLALLPFLPESPKYLLIKKGDEEEARKALKFY-------RGKED--VEAEI-------------EEMLREIEEEELEK 252 (485)
T ss_pred HHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHH-------hCCCc--chhHH-------------HHHHHHHHHhcccc
Confidence 76665554433 333222 22222222211111 00000 00000 00000000000000
Q ss_pred CCCCCCCCCCCCCCCCccchhhHHHHHh-HHhhHhHHHhhHHHHHhhc-CCChhheecccCCCCCCCCcccCcccccchh
Q 039943 300 PGQDSTPDRRASNPWSLCTVDQVEELKA-LIKVIPLWSTGIMIAVTIS-QSSFPVLQASTMDRHITPNFEIPSGSFGIFT 377 (581)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (581)
. ...++...... +..|+ +...+.+...+..-..... +.+.......+.... .....+...+.++
T Consensus 253 -~--------~~~sl~~~~~~--~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~---~a~~an~~~g~v~ 318 (485)
T KOG0569|consen 253 -K--------KQISLRQLLKN--PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE---EAQYANLGIGIVN 318 (485)
T ss_pred -c--------cCCcHHHHhcC--cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH---HHHHHHHHHHHHH
Confidence 0 01111100000 01122 1222212111111111000 011111111111100 0001111222222
Q ss_pred hHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHH-
Q 039943 378 IITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMW- 456 (581)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 456 (581)
....+ +...+.+|.|||+ .+..+..++.+..+++.......... . ++..
T Consensus 319 ~~~t~--------~~~~lid~~gRRp-------Lll~~~~~~~~~~~~~~~~~~l~~~~--------------~-~~~~y 368 (485)
T KOG0569|consen 319 LLSTL--------VSPFLIDRLGRRP-------LLLISLSLMAVALLLMSIALFLSNSF--------------G-SWLSY 368 (485)
T ss_pred HHHHH--------HHHHHHHhcCCcH-------HHHHHHHHHHHHHHHHHHHHHHHHHh--------------h-hHHHH
Confidence 22222 2334778888884 67777776666665555443211100 0 1211
Q ss_pred -HHHHHH-HHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCch
Q 039943 457 -VLPYHV-LSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGR 534 (581)
Q Consensus 457 -~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~ 534 (581)
.+...+ +.........|..+-+..|.+|++.|+.++++...++++.+++.....+.+.+..+
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---------------- 432 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---------------- 432 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------
Confidence 122222 23333455578889999999999999999999999999999999999998887543
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhccccccccchhhh
Q 039943 535 YDYYYWLLAGLNMASFIYFLACCKAYGPCREEASEA 570 (581)
Q Consensus 535 ~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (581)
.+.|+.+++.+++..+..+...||+|+|+-.|+.+
T Consensus 433 -~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~ 467 (485)
T KOG0569|consen 433 -PYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIE 467 (485)
T ss_pred -chhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHH
Confidence 25789999999999999999999999998776433
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=2e-19 Score=188.54 Aligned_cols=154 Identities=18% Similarity=0.199 Sum_probs=136.7
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
..+.+|.+. +++|++..+.+++.+++.++..++.++.|+++|| +|||+++..+.++.+++..++.+++
T Consensus 10 ~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~---------- 77 (377)
T PRK11102 10 YLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQ---------- 77 (377)
T ss_pred HhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHc----------
Confidence 446666655 5799999999999999999999999999999999 7999999999999999999988877
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
+.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.+++.+....+|..++|.++++
T Consensus 78 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~ 137 (377)
T PRK11102 78 -------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPK-------EEFSRMMSFVTLVMTIAPLLAPIIGGW 137 (377)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999999988 679999999999999999999999999
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHH
Q 039943 205 IQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 205 i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+.+..+|++.|++.++..++..+...
T Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 138 LLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99989999999987776665544433
No 69
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.3e-20 Score=200.06 Aligned_cols=379 Identities=14% Similarity=0.128 Sum_probs=236.2
Q ss_pred hhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccc
Q 039943 55 GEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESA 134 (581)
Q Consensus 55 ~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (581)
++++++.+|.+++.+.+..++.++++++|+++|| +|-|+++..+.++.++++++.+++..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa~------------------- 125 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAAS------------------- 125 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3688999999999999999999999999999999 69999999999999999999999882
Q ss_pred cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc-ccchh
Q 039943 135 TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDN-LGWKV 213 (581)
Q Consensus 135 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~-~g~~~ 213 (581)
.+.+.+++.|+++|++.|...|+...+.+.+.|+ .+|++..++.+.+..+|.+++.+++|++.+. +||++
T Consensus 126 --~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~-------~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 126 --IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPP-------NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred --hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCH-------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 2445789999999999999999999999999999 6799999999999999999999999999998 99999
Q ss_pred hhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccCccccccccCCCCCccccCCcchhhhhh
Q 039943 214 GFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNK 293 (581)
Q Consensus 214 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (581)
+||+.+++.++..+++++.....+.++|.-+..+ +.+++.
T Consensus 197 ifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~E----------------------------------------l~~I~~ 236 (466)
T KOG2532|consen 197 IFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKE----------------------------------------LKYIEK 236 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHH----------------------------------------HHHHHh
Confidence 9999999988887777665443333222211100 000100
Q ss_pred hhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-CChhheecccCCCCCCCCcccCccc
Q 039943 294 ACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-SSFPVLQASTMDRHITPNFEIPSGS 372 (581)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (581)
.+...+. + .....||+.... ...+...+..............+ .+.|+.+...++..- .+.
T Consensus 237 ~k~~~~~-----~-~~~~vP~~~i~t-----s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~-------~G~ 298 (466)
T KOG2532|consen 237 GKSEAHV-----K-KKPPVPYKAILT-----SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE-------TGF 298 (466)
T ss_pred ccccccc-----C-CCCCCCHHHHHc-----CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh-------hhH
Confidence 0000000 0 001445542111 11111111111111111112222 455544433332221 233
Q ss_pred ccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcc
Q 039943 373 FGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRM--GIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVV 450 (581)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 450 (581)
+..+..+...+...+.+. +.||+..|....+..+++ .++....++.++..++...
T Consensus 299 ~salP~l~~~~~k~~~g~----lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~------------------- 355 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQ----LSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD------------------- 355 (466)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC-------------------
Confidence 334444444444444344 444443331112233333 5555666666655554321
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCC
Q 039943 451 KMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNI 530 (581)
Q Consensus 451 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~ 530 (581)
... +..++.+.+.-...++..+..+.-..+.+ +++.+..+|+.+.+..+..+++|.+.+.+... ++.++|
T Consensus 356 ~~~-~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~---~t~~eW----- 425 (466)
T KOG2532|consen 356 EHR-LLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTD---NTREEW----- 425 (466)
T ss_pred Ccc-hHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCC---CCHHHH-----
Confidence 111 11111111111111222222222112223 56689999999999999999999999888631 133466
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhhc
Q 039943 531 NKGRYDYYYWLLAGLNMASFIYFLACCK 558 (581)
Q Consensus 531 ~~~~~~~~f~~~a~~~~~~~~~~~~~~~ 558 (581)
+.+|.+.+++.+++.+++.++..
T Consensus 426 -----~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 426 -----RIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred -----HHHHHHHHHHHHHhchheeEeec
Confidence 88999999999999988877753
No 70
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=7.9e-19 Score=185.16 Aligned_cols=171 Identities=15% Similarity=0.112 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
.......+....+.......+| .+.+++|.+..+.+++.+++.++..++.++.|+++|| +|||+++..+.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHH
Confidence 3334444555555555555555 4557899999999999999999999999999999999 7999999999999999988
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
++..++ +.+.+++.|+++|++.+...+...+++.|.+|+ ++|++..++.+
T Consensus 84 ~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~ 133 (392)
T PRK10473 84 LCSLAE-----------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD-------RRRAKVLSLLN 133 (392)
T ss_pred HHHHhC-----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH-------HHHHHHHHHHH
Confidence 888776 677888999999999999999999999999988 67999999999
Q ss_pred HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 189 VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
...++|..++|.+++++.+..+|++.|++.+++.++..+....
T Consensus 134 ~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 134 GITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888889999999987766655544333
No 71
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=3.7e-19 Score=190.38 Aligned_cols=172 Identities=15% Similarity=0.177 Sum_probs=129.5
Q ss_pred HHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCch-hhHHHHHHHHHHHHHHHHH
Q 039943 37 FERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGRY-PMIGFGCITYLLGVVLLWL 112 (581)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Grr-~~~~~~~~~~~~~~~~~~~ 112 (581)
..++....+..+++.|+++++|+++.++|++.++..+..++..|+.|+++||. +||| +.++.+.++.+++.+++..
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh
Confidence 34455555668899999999999999999999999999999999999999972 4774 4677787888888777766
Q ss_pred hhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHh
Q 039943 113 TTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVL 192 (581)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 192 (581)
.++... ......+++.+++.+++.+.......++.+|..+++ ++|++..++.....+
T Consensus 90 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~~R~~~~~~~~~~~~ 146 (437)
T TIGR00792 90 TPDFSA-----------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP------RERESLSTFRRFGAT 146 (437)
T ss_pred CCCCCc-----------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH------HHHHHHHHHHHHHHH
Confidence 552111 123566777788888888888888888888887543 469999988888888
Q ss_pred hHHHHHHHHHHhhh-------ccccchhhhHHHHHHHHHHHHHHHh
Q 039943 193 ASSMVAVTCIVYIQ-------DNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 193 ~g~~~~p~~~~~i~-------~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+|..+++.+.+.+. +..+|++.+.+.+++.++..+....
T Consensus 147 ~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 192 (437)
T TIGR00792 147 LGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFF 192 (437)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHc
Confidence 88877766655443 2458999988877766655544433
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.86 E-value=5.5e-19 Score=187.85 Aligned_cols=396 Identities=12% Similarity=0.032 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCc-hhhHHHHHHHHHHHHH
Q 039943 30 FIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGR-YPMIGFGCITYLLGVV 108 (581)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Gr-r~~~~~~~~~~~~~~~ 108 (581)
.+.+..++...++-...+++++|+++++|++..|.|++.+++.++..+++++.|+++|| +|| |+++.++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHH
Confidence 34455556666666677999999999999999999999999999999999999999999 665 7788888887777777
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCC--CCcccchhhhHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKG--DENKSKGALQSYFSW 186 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~r~~~~~~ 186 (581)
+..+.+ +++.++..|++.|++.+...+...++..+...+. |..+. ..|.+.++
T Consensus 85 ~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~-~~~~r~~G- 139 (418)
T TIGR00889 85 FAAQVT-----------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTD-FPPIRVMG- 139 (418)
T ss_pred HHHHhc-----------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhc-CCCeeeeh-
Confidence 777666 6777888888999987777776665543222110 00000 12444443
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccC
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSS 266 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (581)
.+|.++||.+++.+.....|. +|++.++..++..+..+ ..++.++.+ +++. .+..+ +.
T Consensus 140 -----~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~-~~~~-~~~~~-------~~------ 197 (418)
T TIGR00889 140 -----TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAK-STAK-MSIKV-------ML------ 197 (418)
T ss_pred -----hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCc-cccc-cCHHH-------Hh------
Confidence 478899999988884433454 45555555444443322 222211100 0000 00000 00
Q ss_pred ccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhc
Q 039943 267 QTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTIS 346 (581)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (581)
+ .+..... ++.+.....+..++..........
T Consensus 198 --------------------~---~~~~~~~-------------------------k~~~~~~~~~~~~~~~~~~~~~~~ 229 (418)
T TIGR00889 198 --------------------G---LDAFILF-------------------------KNKRMAIFFFFSMLLGAPLQITNI 229 (418)
T ss_pred --------------------h---hhHHHHh-------------------------cCCCeeeHHHHHHHHHhHHHHHHH
Confidence 0 0000000 000000000111111111111111
Q ss_pred CCChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 039943 347 QSSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAW 426 (581)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~ 426 (581)
..+.+..+. ..+.....+ ......+....+..+.. .+...+..++.||+++| +.+..+.++.++++..+
T Consensus 230 ~~~~~~~~~-g~~~~~~~~--~~~~~~g~~~~~~~i~~-i~~~~~~g~l~dr~g~r-------~~l~~~~~~~~v~~~l~ 298 (418)
T TIGR00889 230 FGNGFLHEF-GRNPEFADS--FVVKNASIWMSLSQFSE-IFFILTIPFFLKRFGIK-------KVMLLSLVAWALRFGFF 298 (418)
T ss_pred hHHHHHHHh-cccccccch--hhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHH
Confidence 111121110 000000000 00111122222211111 11123344567775554 57777777777766555
Q ss_pred HHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHH-HHHHHHHHH
Q 039943 427 AITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHG-LGMSVASLV 505 (581)
Q Consensus 427 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~i 505 (581)
..... .....+.++...++.+++++...+....++.+.+|++.|++++|+.+ ....+|.++
T Consensus 299 ~~~~~------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 299 AYGDP------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHcCc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 44210 01123344556788888888888888889999999999999999997 678899999
Q ss_pred HHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 039943 506 ASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAY 560 (581)
Q Consensus 506 ~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~ 560 (581)
++.+.+.+.+..+.... .+|+..|.+.+++.+++.+.++++.++.
T Consensus 361 Gp~l~G~l~~~~g~~~~----------~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGT----------FDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHhccccC----------CchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999876432110 1357888888888888888888887654
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=5e-19 Score=187.00 Aligned_cols=385 Identities=9% Similarity=0.031 Sum_probs=226.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.+|......++...+...+.++++.|+++++|++..+.+++.+++.++..++.++.|+++|| +|||+.++.+.+..+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 45666667777778878888999999999999999999999999999999999999999999 79999999877666554
Q ss_pred HHHHH---HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 107 VVLLW---LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 107 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
..... +.+... ......+++.+++.|++.+...+...++..|.-+ +++..
T Consensus 82 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~ 134 (396)
T TIGR00882 82 FAPFFIYVFGPLLQ------------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR---------NSNFE 134 (396)
T ss_pred HHHHHHHHhhhHHH------------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh---------hcccc
Confidence 33221 111000 0023445667888898888888888777666422 23456
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcccc
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIK 263 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (581)
++..+...++|..++|.+++.+.+ .+|+.+|++.+++.++..+..+...++. ++++... +..+
T Consensus 135 ~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~~~~ 197 (396)
T TIGR00882 135 YGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSSATVA------------NALG 197 (396)
T ss_pred cchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chhhhhh------------cccc
Confidence 677777889999999999998865 5999999988777666554443322211 1100000 0000
Q ss_pred ccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHH
Q 039943 264 LSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAV 343 (581)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (581)
.+ + ..++.+ +.. .....|.....+.........+.
T Consensus 198 ~~-----------~------~~~~~~--~~~--------------------------~~l~~~~~~~~~l~~~~~~~~~~ 232 (396)
T TIGR00882 198 AN-----------A------SAFSLK--LAL--------------------------ELFRQRKFWMFVLYVVGVACVYD 232 (396)
T ss_pred cc-----------c------CCCCHH--HHH--------------------------HHHcCCcHHHHHHHHHHHHHHHH
Confidence 00 0 000000 000 00001111111111111111111
Q ss_pred hhcC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 039943 344 TISQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTAS 422 (581)
Q Consensus 344 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~ 422 (581)
...+ .+.++..... +.. ......+....+..+...+ ......++.||+++| +.+.++.++.++.
T Consensus 233 ~~~~~~~~y~~~~~~-~~~------~~~~~~g~~~~~~~i~~~~-~~~~~g~l~~r~g~~-------~~l~~~~~l~~l~ 297 (396)
T TIGR00882 233 VFDQQFANFFTSFFA-TPQ------QGTRVFGYVTTMGELLNAL-IMFCAPLIINRIGAK-------NALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHhcc-ccc------cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccc-------hhHHHHHHHHHHH
Confidence 1111 1222111110 001 1111122222221111111 122334567776655 4566777666666
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHH-HHHHHHH
Q 039943 423 MAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASAL-HGLGMSV 501 (581)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~i 501 (581)
+...... .+.+++.+..++.+++..........+..+..|++.+++..+. .+....+
T Consensus 298 ~~~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l 355 (396)
T TIGR00882 298 IIGSSFA----------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL 355 (396)
T ss_pred HHHHHhc----------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence 5543331 2444555666777777666666666677777888888887776 5788999
Q ss_pred HHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 039943 502 ASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFL 554 (581)
Q Consensus 502 g~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~ 554 (581)
|+++++.+.+.+.|.. ++...|.+.+++.++..+...
T Consensus 356 g~~~~~~l~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 356 AMIFLSTLAGNMYDSI----------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhHHHHHHhc----------------ccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998743 257788888888777665543
No 74
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.85 E-value=1e-18 Score=184.47 Aligned_cols=179 Identities=11% Similarity=0.000 Sum_probs=131.8
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhh-hcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCG-EYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
|.++...+ .+.-.+..+.+.+.+...+.+ ++|+|.+|.+++.+++.+++.++.++.|++.|| +|.|+++.++.++..
T Consensus 34 r~l~~s~~-~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVS-CLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHH
Confidence 44443333 344444444455555556544 899999999999999999999999999999999 699999999999999
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
+...+++++.+. ...++..+++.|++.|++ +...+.....++++||+ ++|+++.
T Consensus 112 i~~~~~~~a~~~------------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~-------~~rG~A~ 165 (462)
T PRK15034 112 IPCVWLGIAVQN------------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPK-------AKQGSAL 165 (462)
T ss_pred HHHHHHHHHHcc------------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH-------hHhHHHH
Confidence 999888876200 011788999999999998 66888899999999998 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhh-----c-------------cccchhhhHHHHHHHHHHHHHHHhc
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQ-----D-------------NLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~-----~-------------~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
++.....++|..+++.+...+. . ..+|+.++++..+..++..+..++.
T Consensus 166 Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 166 GINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9997666777766555544322 2 2346666666666655555444443
No 75
>PRK10133 L-fucose transporter; Provisional
Probab=99.85 E-value=1.2e-18 Score=186.22 Aligned_cols=148 Identities=12% Similarity=0.071 Sum_probs=119.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.++.+.+..+...+........+ +.+++++|+++.+.+++.+.+.+++.+++++.|+++|| +|||+++..+.++++++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g~~~~~~~ 104 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 33444444445555544444444 45689999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHH---HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 107 VVLLW---LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 107 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.+++. +++ ++..++++|+++|+|.|...+...+++.|..|+ ++|...
T Consensus 105 ~~l~~~~~~a~-----------------------~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~-------~~~~~~ 154 (438)
T PRK10133 105 AALFWPAAEIM-----------------------NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-------SSGHFR 154 (438)
T ss_pred HHHHHHHHhcC-----------------------CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh-------hhHHHH
Confidence 98763 344 788899999999999999999999999987554 446666
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhh
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
.++......+|..+||.+++.+.
T Consensus 155 ~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 155 LNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999998876543
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=3.7e-18 Score=185.09 Aligned_cols=175 Identities=10% Similarity=0.041 Sum_probs=138.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc-----Cchhh-HHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCV-----GRYPM-IGF 98 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~-----Grr~~-~~~ 98 (581)
+|..+.+++..+......+.....+|.|++ +.|.+.++.+.. +...... ++.++.|.++|| + ||||. ++.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr-~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDR-YTPPFLGRRRGWLLA 86 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHc-ccccCCCCchHHHHH
Confidence 445666666777777777777777888876 569999999886 3333332 688999999999 8 99986 667
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccch
Q 039943 99 GCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKG 178 (581)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (581)
+.+..+++...+++..+ ..+++.+.+.+++.+++.+...+...++..|++|+ +
T Consensus 87 ~~i~~~~~~~~~a~~~~--------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~-------~ 139 (491)
T PRK11010 87 TQLLLLVAIAAMGFLEP--------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA-------E 139 (491)
T ss_pred HHHHHHHHHHHHHHcCC--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-------h
Confidence 77777777777777541 22677888899999999999999999999999997 6
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHhhhc-cccchhhhHHHHHHHHHHHHHHH
Q 039943 179 ALQSYFSWYYVSVLASSMVAVTCIVYIQD-NLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~p~~~~~i~~-~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+|+++.++...+..+|..+++.+.+++.+ ..|||..|++.++..++..+..+
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999988 47999999998877665544433
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.85 E-value=1.4e-18 Score=208.12 Aligned_cols=155 Identities=11% Similarity=0.068 Sum_probs=124.9
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcc--hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMET--TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITY 103 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~--~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (581)
+.....++..++.++...+....+..++...++.+. ...+++.+++.++..++.+++|+++|| +|||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHH
Confidence 445555566666666665555666666666666654 346888999999999999999999999 69999999998776
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
+++.++..++.. ..+++.+++.|+++|++.+...+...++++|++|+ ++|+++
T Consensus 88 ~~~~~~~~~~~~--------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~ 140 (1146)
T PRK08633 88 VGLTLLIVLAYY--------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK-------ENLSRA 140 (1146)
T ss_pred HHHHHHHHHHHH--------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc-------ccchhh
Confidence 666655544321 11578899999999999999999999999999998 669999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhcc
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDN 208 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~ 208 (581)
+++...+.++|.++||.+++++.+.
T Consensus 141 ~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 141 NGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998765
No 78
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.84 E-value=6.3e-18 Score=182.58 Aligned_cols=381 Identities=12% Similarity=0.036 Sum_probs=242.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.+..+.+..++.+++......-++-++. ++.-|+...+++..+..+-..+..+++|.++|| +.|||+++.+-++..+.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHH
Confidence 4445556666777776554444554444 556688999999999999999999999999999 69999999998887776
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
...+++.... +..+.+.+++.-++.|++.+...|+..+++.|+.|+ ++..++.++
T Consensus 89 ~~~L~~l~~~------------------~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~-------~~L~~A~al 143 (524)
T PF05977_consen 89 ALLLAVLAFF------------------GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK-------EDLPAANAL 143 (524)
T ss_pred HHHHHHHHHh------------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-------hhHHHHHHH
Confidence 5555544311 123678889999999999999999999999999998 568999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccC
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSS 266 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (581)
.....|+...+||.++|.+....|-.++|.+.++..++....+...++..++ ++.+.+...+.+...++.
T Consensus 144 ~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l~~G~ry------- 213 (524)
T PF05977_consen 144 NSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSALREGLRY------- 213 (524)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhHHHHHHH-------
Confidence 9999999999999999999888898899999888766655443333222111 111111111111111110
Q ss_pred ccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhc
Q 039943 267 QTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTIS 346 (581)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (581)
. ...+.+...+........+...+.
T Consensus 214 ------------------------v-------------------------------~~~~~l~~~l~~~~~~~l~~~a~~ 238 (524)
T PF05977_consen 214 ------------------------V-------------------------------RSSPPLRSVLLRSFLFNLFASAVW 238 (524)
T ss_pred ------------------------H-------------------------------hcchHHHHHHHHHHHHHHhhhHHH
Confidence 0 000111111110000011111111
Q ss_pred C-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 039943 347 Q-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAA 425 (581)
Q Consensus 347 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~ 425 (581)
. .+.+..+..+ ..+..++.+.... ..+.+.+.+ +..|+.+| .+..+.+..+.++.+++++.
T Consensus 239 aLlPl~a~~~l~----------~~a~~yGll~a~~--gvGai~Gal---~~~~l~~~---~~~~~lv~~~~~~~a~~~~~ 300 (524)
T PF05977_consen 239 ALLPLFARDVLG----------GGASGYGLLLAAF--GVGAILGAL---LLPRLRRR---LSSRRLVLLASLLFALALLL 300 (524)
T ss_pred HhhhHHHHHHhC----------CcHHHHHHHHHHH--HHHHHHHHH---HHHHhhcc---cCcchhhHHHHHHHHHHHHH
Confidence 1 2222221111 1122222222111 111111111 23333334 45556677777777777766
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHH
Q 039943 426 WAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLV 505 (581)
Q Consensus 426 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i 505 (581)
+++. .+.+..++.+++.|++.....+..++.+...+|+++||+..+++.+....+..+
T Consensus 301 lal~----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l 358 (524)
T PF05977_consen 301 LALS----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL 358 (524)
T ss_pred Hhcc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH
Confidence 6653 255666777888899989988888999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 039943 506 ASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLA 555 (581)
Q Consensus 506 ~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~ 555 (581)
|..+.|.+.+..+ ....+.+.+++.+++.++.+.
T Consensus 359 Gsll~G~la~~~g----------------~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 359 GSLLWGFLADHFG----------------VRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHhC----------------HHHHHHHHHHHHHHHHHHHHH
Confidence 9999998877542 345566555555555554443
No 79
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.84 E-value=5.8e-21 Score=199.92 Aligned_cols=362 Identities=31% Similarity=0.465 Sum_probs=226.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCC
Q 039943 93 YPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGD 172 (581)
Q Consensus 93 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 172 (581)
.|++.++.+++.+|.+++.++...+.. ++..+...++++..+.++|.|+..|+..++++|++++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~--------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL--------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC--------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh--------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 378899999999999998887632221 123356789999999999999999999999999999874
Q ss_pred CcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCccccc-CCCCChhhh-HH
Q 039943 173 ENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQS-KANTSLLTG-LI 250 (581)
Q Consensus 173 ~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 250 (581)
+ ++|.+.++++|++.|+|+.+++.+.+++.++.||.+.|.++++.++++++.++...+++.+. ++.++...+ ..
T Consensus 67 ~----~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 67 D----SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp T----THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred h----hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 3 78999999999999999999999999999999999999999999999999999888877776 555655554 33
Q ss_pred HHHHHHHhhccccccCccccccccCCCC--CccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCc-cchhhHHHHHh
Q 039943 251 QVLVASYKNRHIKLSSQTTEEMYHPRKG--SMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSL-CTVDQVEELKA 327 (581)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 327 (581)
.......+++....+..+ ....+.... ........ .... ......+. ...|.. +..++.+..+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~k~ 209 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPKGS-SWLDWALFQYSERSIFGII--VFIR-AAVIFFPE---------IFFWALFCQVQRVEELKA 209 (372)
T ss_dssp HHHHHHHHHHCCCH-HHH-HHHHHHHHHHCCCCCCCCC--CHHH-HHHHHCCC---------HHHHTTTSSTTTHHHCCH
T ss_pred HHHHHHHHHhhcccccch-HHHHHhhhhhhhhhhhhhh--hhcc-chhhhhhh---------hhhcccCCccceeeeeee
Confidence 333444444433322111 000000000 00000000 0000 00000000 000000 11234455666
Q ss_pred HHhhHhHHHhhHHHHHhhcC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCC
Q 039943 328 LIKVIPLWSTGIMIAVTISQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQL 406 (581)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~ 406 (581)
..+.++.+.+.+.++..+.+ ......+...+++...+.+++++..++.++.+.+++..|+.+++.+|+.+ .+++ .
T Consensus 210 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~-~~~~---~ 285 (372)
T PF00854_consen 210 LIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLR-RGIQ---P 285 (372)
T ss_dssp HHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTT-T-------
T ss_pred eeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhh-hccc---c
Confidence 66666666667777777777 66667777777777773489999999999999999999999999999888 3333 7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCch
Q 039943 407 RLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRS 486 (581)
Q Consensus 407 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 486 (581)
+...++.+|++++.+++.+....+..+.......+ ..+.+|.++.+++..++|.+..+...+..++.+|++
T Consensus 286 ~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~ 356 (372)
T PF00854_consen 286 SPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG---------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSR 356 (372)
T ss_dssp --HHHHHHH-HHHHHHHHTTTHHHH---HH----T---------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC---------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHh
Confidence 88899999999999998888776653332322222 233467779999999999999998888666666666
Q ss_pred hhHHHHHHHHHH
Q 039943 487 MSSIASALHGLG 498 (581)
Q Consensus 487 ~rg~~~g~~~~~ 498 (581)
..+..+|++...
T Consensus 357 ~p~~m~~~~~~~ 368 (372)
T PF00854_consen 357 APSSMMGIWFAL 368 (372)
T ss_dssp -SSSSTHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 555555555443
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=1.9e-18 Score=206.52 Aligned_cols=159 Identities=12% Similarity=0.069 Sum_probs=117.2
Q ss_pred HHHHhhhhhHHHHHhhhhcCCcc-hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH--HHHHHHHHHH-hh
Q 039943 39 RMASMGLMPNMILYLCGEYNMET-TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT--YLLGVVLLWL-TT 114 (581)
Q Consensus 39 ~~~~~~~~~~l~~yl~~~~~~s~-~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~--~~~~~~~~~~-~~ 114 (581)
++....+...+...+++..+.+. ...++..+++.+.+.++.+++|+++|| +|||+++...... ......+.++ ..
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~~~~~~~~~~~ 106 (1140)
T PRK06814 28 NFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIAALAIYGFHLN 106 (1140)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333333444443333 446778889999999999999999999 6999986442222 2222222222 23
Q ss_pred hcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhH
Q 039943 115 ILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLAS 194 (581)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (581)
+++.+++.|+++|++.+...|+..+++.|++|+ ++|++++++.+++.++|
T Consensus 107 -----------------------s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~-------~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 107 -----------------------SVPLLFAALFLMGIHSALFGPIKYSILPDHLNK-------DELLGANALVEAGTFIA 156 (1140)
T ss_pred -----------------------hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc-------cccchhhHHHHHHHHHH
Confidence 788999999999999999999999999999998 66999999999999999
Q ss_pred HHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 195 SMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 195 ~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
.++||+++|++.+..+|++.|.+.+++.+++++.
T Consensus 157 ~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (1140)
T PRK06814 157 ILLGTIIGGLATISGNFVILVALLMGIAVLGWLA 190 (1140)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999985444444444433
No 81
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=9.4e-19 Score=183.54 Aligned_cols=156 Identities=17% Similarity=0.179 Sum_probs=115.8
Q ss_pred HHHHhhhhcC--CcchhhHHHHHHH-----HHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q 039943 49 MILYLCGEYN--METTAGTNVLLIW-----TAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQP 121 (581)
Q Consensus 49 l~~yl~~~~~--~s~~~~~~i~~~~-----~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (581)
+..++.++.. .++++.+.+.+.. .+...++.++.|+++|| +||||++..+.++..++.+++++++++...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-- 91 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATI-- 91 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhh--
Confidence 4445544433 4455555544432 22334688999999999 799999999999999999999887732110
Q ss_pred CcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 122 PACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
.......+++.|+++|++.+...+...+++.|.+|+ ++|++..+..+.+..+|..+++.+
T Consensus 92 -------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~G~~i~~~~ 151 (394)
T TIGR00883 92 -------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP-------GKRGFYGSFQQVGAPVGLLLAALT 151 (394)
T ss_pred -------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc-------ccchHHHHHHHHHHHHHHHHHHHH
Confidence 001124688899999999999999999999999988 669999999999999999999987
Q ss_pred HHhhh--------ccccchhhhHHHHHHHHHHHH
Q 039943 202 IVYIQ--------DNLGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 202 ~~~i~--------~~~g~~~~f~~~~~~~~i~~~ 227 (581)
++.+. +.++||+.|++.++..+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 152 VLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 76553 357899999887766554443
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.83 E-value=8.5e-18 Score=176.75 Aligned_cols=156 Identities=10% Similarity=-0.043 Sum_probs=119.0
Q ss_pred HHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCch----hhHHHHHHHHHHHHHHH
Q 039943 35 EAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRY----PMIGFGCITYLLGVVLL 110 (581)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr----~~~~~~~~~~~~~~~~~ 110 (581)
.++..++...+.+++|.|++ ++|.|..+.|++.+++.+...++.++.|.++|| +||| +.+.+..++. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHH--HHHHH
Confidence 34444555666788889995 689999999999999999999999999999999 6984 3332222111 11122
Q ss_pred HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHH
Q 039943 111 WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVS 190 (581)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (581)
..++ +++.+++.|++.|++.+...|...++..+.. ++|++.++..+..
T Consensus 89 ~~~~-----------------------~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~---------~~~~~a~~~~~~~ 136 (382)
T PRK11128 89 FGAH-----------------------SFWLLFVAIGLFNLFFSPLVPLTDALANTWQ---------KQIGLDYGKVRLW 136 (382)
T ss_pred Hhcc-----------------------cHHHHHHHHHHHHHHHcccccHHHHHHHHHH---------hhccCCcchHHHH
Confidence 2223 6788889999999999999998888877752 2377778888888
Q ss_pred HhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHH
Q 039943 191 VLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSA 226 (581)
Q Consensus 191 ~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~ 226 (581)
.++|.++||++++++.+++|||..|++.++..++..
T Consensus 137 ~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 137 GSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 899999999999999999999999988776544443
No 83
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.83 E-value=2.2e-18 Score=174.11 Aligned_cols=182 Identities=13% Similarity=0.073 Sum_probs=152.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITY 103 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~ 103 (581)
+.|.++ +....+.-.+..+.+.+.+.+++.+++|+|+.|.+++..+..+...+..++-|.+.|| ||-|++...+.++.
T Consensus 12 ~~~~L~-~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLW-LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSMLLL 89 (417)
T ss_pred hhHHHH-HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHHHHH
Confidence 344444 3344445555566677778888999999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
++-.+..+++... .+.+.+++.+.+.|++.|. .+...+++++.||+ +++|.+
T Consensus 90 ~IP~~~~~~a~~~--------------------~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~-------~~qG~A 141 (417)
T COG2223 90 LIPCLGLAFAVTY--------------------PSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPK-------EKQGLA 141 (417)
T ss_pred HHHHHHHHHHccC--------------------CchHHHHHHHHHHhcccce-ehcccccccccCCh-------hhhhHH
Confidence 9999999998732 2457899999999998555 57788889999999 679999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhcccc---chhhhHHHHHHHHHHHHHHHhcCCcc
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNLG---WKVGFGVPAVISLLSALSFFLASPFY 236 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~g---~~~~f~~~~~~~~i~~~~~~~~~~~~ 236 (581)
.+++. ..|+|..+...++.++....+ |+.+..+..+.+++..+..++..+..
T Consensus 142 lGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 142 LGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred HHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999 899999999999999988888 99999988888888777766655443
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.83 E-value=2.1e-17 Score=175.05 Aligned_cols=164 Identities=13% Similarity=0.064 Sum_probs=130.4
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc-----Cchh-hHHHHHHHHHHHH
Q 039943 34 NEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCV-----GRYP-MIGFGCITYLLGV 107 (581)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~-----Grr~-~~~~~~~~~~~~~ 107 (581)
..+.+...+.-...-+|.|++ +.|+|.++.|++..+... .+..++.|+++|| + |||| .+.++.++.+++.
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHHH
Confidence 344445555556677889997 459999999999777665 6889999999999 7 8875 7888888888877
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
..+.+..+ ..+++.+++..++.++..+...+...+++.|.+|+ ++|+++.++.
T Consensus 83 ~~l~~~~~--------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~-------~~r~~~~~~~ 135 (402)
T PRK11902 83 AAMAFCPP--------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP-------EERGAGAAVK 135 (402)
T ss_pred HHHHhcCc--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-------hhhhHHHHHH
Confidence 77777641 12566677777778888888899999999999988 6699999999
Q ss_pred HHHHhhHHHHHHHHHHhhhcc-ccchhhhHHHHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDN-LGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~-~g~~~~f~~~~~~~~i~~~~ 228 (581)
..+.++|..+++.+++++.+. +|||..|++.++..++..+.
T Consensus 136 ~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 136 VLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988875 59999999988766555443
No 85
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=1.6e-18 Score=180.75 Aligned_cols=164 Identities=17% Similarity=0.117 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
.+...+..+......+...+.+|.++++++|++..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHH
Confidence 4455555566666666677777778999999999999999999999999999999999999 699999999999999998
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+++++++. +++.+++.|+++|++.+. .+...++++|.+|+ ++|++..++.
T Consensus 82 ~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-------~~r~~~~~~~ 131 (366)
T TIGR00886 82 LWAGLAVQ----------------------SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPK-------KIQGTALGLA 131 (366)
T ss_pred HHHHHHhh----------------------hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCH-------hhhhHHHHHH
Confidence 88887650 467788899999999665 45678899999988 6699999998
Q ss_pred HHHHhhHHHHHHHHHHhhhc----------cccchhhhHH-HHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQD----------NLGWKVGFGV-PAVIS 222 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~----------~~g~~~~f~~-~~~~~ 222 (581)
....++|..+++.+++.+.. ..+|++.|++ .+++.
T Consensus 132 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 132 AGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 88888888888877766554 2489999844 34433
No 86
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=6.8e-18 Score=175.57 Aligned_cols=145 Identities=13% Similarity=0.187 Sum_probs=122.0
Q ss_pred hHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 039943 47 PNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ 126 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
..+.+.+.+++|++.++.+++.+++.++..++.++.|+++|| +||||++..+.++..++.+.+ .++
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~------------ 85 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SAP------------ 85 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-Hhc------------
Confidence 334446777999999999999999999999999999999999 799999999998888777666 444
Q ss_pred cccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 127 LRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
+.+.+++.|++.|++.+...+..+..+.|.+|+ +|+++.++++...++|..+++.+++.+.
T Consensus 86 -----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 146 (355)
T TIGR00896 86 -----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ--------RVGLMTGLYSMALMGGAALAAAATVPLA 146 (355)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999998888888888888753 4899999999999999999999998887
Q ss_pred ccc--cchhhhHHHHHHHHH
Q 039943 207 DNL--GWKVGFGVPAVISLL 224 (581)
Q Consensus 207 ~~~--g~~~~f~~~~~~~~i 224 (581)
+.. +||+.|.+.++..++
T Consensus 147 ~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 147 QHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HhhhhhHHHHHHHHHHHHHH
Confidence 764 399888776654443
No 87
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.80 E-value=1.1e-16 Score=170.32 Aligned_cols=445 Identities=9% Similarity=0.003 Sum_probs=248.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhc----cccCchhhHHHH-HHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLAD----SCVGRYPMIGFG-CIT 102 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laD----r~~Grr~~~~~~-~~~ 102 (581)
++.+....+--++++-...+++++|+ +++|.+..+.+++..+..+...+.+|+.|+++| | +||||.++.+ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr-~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSR-FGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCC-CCChHHHHHHHHHH
Confidence 44455555556677666778888887 579999999999999999999999999999999 6 6999998875 556
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
.+++.++++++.+...... |.. ...........++.+..+..++....++...++++|..|+++ ++++.
T Consensus 84 ~~~~l~ll~~~~~~~~~~~----~~~--~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~-----~~~~~ 152 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFG----DNL--DKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA-----RRTRI 152 (477)
T ss_pred HHHHHHHHHhCchhhhhcc----ccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh-----HHHHH
Confidence 6667777777653211000 000 000011122344555556667888888889999999999854 34578
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhh--hcc-------------ccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhh
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYI--QDN-------------LGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLT 247 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i--~~~-------------~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 247 (581)
++++.+...++|+.+|+.++++. .+. .+.+..|++.+++.++..++..+..++.+..++++ ..+
T Consensus 153 a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~-~~~ 231 (477)
T TIGR01301 153 ANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDD-FIN 231 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcccc-chh
Confidence 89999999999999999988764 211 15688899888877777665555443322111100 000
Q ss_pred hHHHHHHHHHhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHh
Q 039943 248 GLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKA 327 (581)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (581)
+ +.. +.++ .+. ...++++.....+--|.
T Consensus 232 ~--------------~~~-----------~~~~----~~~-----------------------~~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 232 S--------------EAA-----------PPSK----HGE-----------------------EAFFGELFGAFKYLPRP 259 (477)
T ss_pred h--------------hcc-----------cccc----cch-----------------------hhhHHHHHHHHHHCCHH
Confidence 0 000 0000 000 00000000000011122
Q ss_pred HHhhHhHHHhhHHHHHhhcC-CChhheecccCC-CCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCC
Q 039943 328 LIKVIPLWSTGIMIAVTISQ-SSFPVLQASTMD-RHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQ 405 (581)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~ 405 (581)
+.+++....+.-..|+.+.. .+.++-+..+-. ......|+. ...++........+...+...+..++.+|+++|
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~-gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~--- 335 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDD-GVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG--- 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence 22333232333333333333 333322211100 000001100 000111111111111123334455577776643
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccch-HHHHHHHHHHHHHHHHHHhhhhheeecccCC
Q 039943 406 LRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMS-AMWVLPYHVLSGLAMAFNMIGQIEFYYSELP 484 (581)
Q Consensus 406 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 484 (581)
+..-.++.++.++++....+......+. ..++-+ +.--.++.. .+..+..+...|+..+......++.+.+..|
T Consensus 336 ---k~~~~~s~~~~~~~l~~~~~i~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 336 ---KRLWGIVNIILAICLAATVLVTYVAKNS-RYYDGD-GESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhhhhcc-cccccc-ccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 1233666666766766555433210000 000000 000011112 3566677788888888888889999999988
Q ss_pred c--hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 039943 485 R--SMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYG 561 (581)
Q Consensus 485 ~--~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~ 561 (581)
+ +..|..+|+.|++-.+.+++.+...+.+.+..+. +...++.+-++..+++.+..++..|+.+
T Consensus 411 ~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 411 NLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred ccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 5 4569999999999999999999888876554431 1234677777778888888887777654
No 88
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.80 E-value=1.1e-16 Score=169.79 Aligned_cols=169 Identities=13% Similarity=0.122 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHH
Q 039943 30 FIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVL 109 (581)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 109 (581)
.+....+...+.. ++...+.+.+++++|++..+.+++.+.+.+++.++.++.|++.|| +|||+++..+.++++++..+
T Consensus 7 ~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 7 LITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHH
Confidence 3333334444443 455455567789999999999999999999999999999999999 79999999999999999887
Q ss_pred HHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHH
Q 039943 110 LWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYV 189 (581)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (581)
+..+.. ..+++.+++.|++.|+|.|...+...+++.+..|+ ++|++..++.+.
T Consensus 85 ~~~~~~--------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 137 (410)
T TIGR00885 85 FWPAAE--------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPE-------STATRRLNLAQS 137 (410)
T ss_pred HHHHHh--------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH-------hHHHHHHHHHHH
Confidence 655431 12678899999999999999999999999998877 568888999999
Q ss_pred HHhhHHHHHHHHHHhhhcc--------------------------ccchhhhHHHHHHHHHHHH
Q 039943 190 SVLASSMVAVTCIVYIQDN--------------------------LGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 190 ~~~~g~~~~p~~~~~i~~~--------------------------~g~~~~f~~~~~~~~i~~~ 227 (581)
..++|..++|.+++.+... .+||++|.+.+++.++..+
T Consensus 138 ~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 138 FNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998877422 3699999887775554433
No 89
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.79 E-value=2.9e-17 Score=170.87 Aligned_cols=157 Identities=17% Similarity=0.091 Sum_probs=121.5
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc----cCchhhH-HHHHHHHHHHHHHHHHhhhcccC
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC----VGRYPMI-GFGCITYLLGVVLLWLTTILSQA 119 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~----~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~~ 119 (581)
+.....+.+.+++|+|.++.++.... .+...+ .++.|.++||+ +||||.+ +.+.++.++....+++..+
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~---- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP---- 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc----
Confidence 33444445556889999999998655 444444 89999999993 2899974 5667777777666666541
Q ss_pred CCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHH
Q 039943 120 QPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAV 199 (581)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 199 (581)
..+++.+....++.+++.+...+...++++|++|+ ++|+++.++...+.++|..+++
T Consensus 80 ----------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~ 136 (356)
T TIGR00901 80 ----------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSD-------EELGYGSTIYIVGYRAGMLLSG 136 (356)
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hhhchHHHHHHHHHHHHHHHHH
Confidence 12566677777788888888889999999999988 6799999999999999999999
Q ss_pred HHHHhhhcccc--------chhhhHHHHHHHHHHHHHHH
Q 039943 200 TCIVYIQDNLG--------WKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 200 ~~~~~i~~~~g--------~~~~f~~~~~~~~i~~~~~~ 230 (581)
.+++++....+ ||..|++.++..++..+..+
T Consensus 137 ~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 137 SLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999888777 99999998887666554433
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.79 E-value=3.2e-17 Score=170.08 Aligned_cols=154 Identities=12% Similarity=0.080 Sum_probs=136.1
Q ss_pred hhhHHHHHhhhhcCCcchh-hHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 039943 45 LMPNMILYLCGEYNMETTA-GTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPA 123 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~-~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (581)
..+++.+|+.+++|++.+| .|.+.++++.+++++.+++|+++|| +|-|+++..+.+.+.+..++++++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 4466778999999999999 9999999999999999999999999 7999999999999999999999988
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 124 CDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
++..+.+.|++.|++.|+.. +...++..++|+ ++|+++.++...+..+|.++++++++
T Consensus 114 --------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~-------kER~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 114 --------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP-------SRYQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999 999999999999 78999999999999999999999999
Q ss_pred hhhccccchhhhHHH---HHHHHHHHHHHHh
Q 039943 204 YIQDNLGWKVGFGVP---AVISLLSALSFFL 231 (581)
Q Consensus 204 ~i~~~~g~~~~f~~~---~~~~~i~~~~~~~ 231 (581)
+ ...+||++-+.+. .....++++..++
T Consensus 172 l-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 172 L-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred H-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9 4567888765554 3334445444444
No 91
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=3.6e-18 Score=172.95 Aligned_cols=406 Identities=15% Similarity=0.076 Sum_probs=228.5
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchh
Q 039943 59 METTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQ 138 (581)
Q Consensus 59 ~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (581)
+++.-.+.+..+..++..+|+++.||++|| +|||+++...+++++++++++++.. +.++...-
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~----------------~~~~~~~~ 143 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSV----------------GTTSPLGV 143 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCC----------------CCCCCcch
Confidence 677888999999999999999999999999 7999999999999999999776654 11222235
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh---c-c------
Q 039943 139 LMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ---D-N------ 208 (581)
Q Consensus 139 ~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~---~-~------ 208 (581)
+++++..|+++|+|.|+-+|...+..+|...+ ++||...+........|...|.++.-.+. + .
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~-------~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~ 216 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANK-------KTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPST 216 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhh-------ccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCC
Confidence 68899999999999999999999999998776 66888777666666666655554433321 1 1
Q ss_pred -----ccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHH-HHHHHHHhhccccccCccccccccCCCCCccc
Q 039943 209 -----LGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLI-QVLVASYKNRHIKLSSQTTEEMYHPRKGSMLL 282 (581)
Q Consensus 209 -----~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (581)
.=||..|.+.++..++.+.. -+..|+ .+..+... +....+. + +..+.. ..+.++...
T Consensus 217 ~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~E-------t~~Y~al~~~~~~~a~-~---d~~k~~---~~~~~~~~~-- 279 (538)
T KOG0252|consen 217 YPHLDGVWRIIFGLGAVPALLVLYF-RLKMPE-------TARYTALVSKKLKQAA-G---DMKKVL---SVDIEAEST-- 279 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh-hhcCCc-------chhHHHHhhcCHhhhh-h---cccccc---ccccchhhc--
Confidence 12888887776655443322 111111 11111000 0000000 0 000000 000000000
Q ss_pred cCCcchhhhhhhhhccCCCCCCCCCCC-CCCCCCccchhhHH-HHHhHHhhHhHHHhhHHHHHhhcC--CChhheecccC
Q 039943 283 VPSENLRCLNKACIIKHPGQDSTPDRR-ASNPWSLCTVDQVE-ELKALIKVIPLWSTGIMIAVTISQ--SSFPVLQASTM 358 (581)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 358 (581)
.+.... .+++.+++...... .-++++. ....|+.+.. .+.-+++..-.
T Consensus 280 ---------------------~~~~~~~~~~~~~~F~~~f~~~hg~~Llg-------t~~~WFllDiafy~~nL~~s~I~ 331 (538)
T KOG0252|consen 280 ---------------------AESDVPPPSNSFGLFSRLFLRWHGKHLLG-------TAGTWFLLDIAFYGQNLFQSVIF 331 (538)
T ss_pred ---------------------cccCCCCcccccchHHHHHHHHHHHHHHH-------HHHHHHhhhhhhhccccHHHHHH
Confidence 000000 11222212111111 1122222 2222332222 11111221111
Q ss_pred CCCCCCCcccCcccc------cchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 039943 359 DRHITPNFEIPSGSF------GIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETV 432 (581)
Q Consensus 359 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 432 (581)
+ .+ ++.-..... ...+.+.......-.-++...+.+++||+ .....|++++++.+++.+..-+.
T Consensus 332 ~-~i--g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-------~iq~~GF~~~~i~~~~~~~~y~~ 401 (538)
T KOG0252|consen 332 S-AI--GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-------YIQLMGFFIMTIFFFVIAGPYNQ 401 (538)
T ss_pred H-hh--ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-------HHHHhhHHHHHHHHHHHcCCccc
Confidence 1 00 000011111 11112221211111223334466776666 57788888888887776652210
Q ss_pred HhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 039943 433 RRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNA 512 (581)
Q Consensus 433 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~ 512 (581)
. .......++.-+....+......+...+..|.+|.+.||+.-|+...+.-+|.+++......
T Consensus 402 ---~--------------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 402 ---L--------------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred ---c--------------cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 0 00111222222333345566666777888899999999999999999999999999887766
Q ss_pred hhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccccccchhhhhh
Q 039943 513 VDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPCREEASEALD 572 (581)
Q Consensus 513 i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (581)
..+. + +|. ..++..++++++++++++.++.+++. |+++++++|.++..
T Consensus 465 ~t~~-------~-yp~---~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei~~e~ 512 (538)
T KOG0252|consen 465 LTDH-------N-YPP---NIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEISNEE 512 (538)
T ss_pred hhhc-------c-CCc---cccchHHHHHHHHHHHHhHheeEEee-cccccCHHHhcChh
Confidence 6541 1 111 22457789999999999988877765 99999998875543
No 92
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=6.8e-16 Score=161.98 Aligned_cols=384 Identities=15% Similarity=0.127 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHH
Q 039943 31 IIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLL 110 (581)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 110 (581)
+....++..+.+-...++++.|++ +.|+|..|.|.+.++..++..+++++.|+++||...+||.+.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444555555556788999997 5789999999999999999999999999999995346777777666666555555
Q ss_pred HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHH
Q 039943 111 WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVS 190 (581)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (581)
.... +.+.++...++..+...+..|...++.-+...+ ++.-++-....
T Consensus 86 ~~~~-----------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~---------~~~~YG~iRlw 133 (400)
T PF03825_consen 86 AFSS-----------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD---------RGKDYGRIRLW 133 (400)
T ss_pred HHhc-----------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc---------ccCCCCcchhh
Confidence 4444 566667777778888888888888887777654 33335555555
Q ss_pred HhhHHHHHHHH-HHhhhcccc---chhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccC
Q 039943 191 VLASSMVAVTC-IVYIQDNLG---WKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSS 266 (581)
Q Consensus 191 ~~~g~~~~p~~-~~~i~~~~g---~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (581)
.++|-+++... ++++....+ ..+.+++.+...++.....+. .|+.+.++..++..++
T Consensus 134 GSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~~------------------ 194 (400)
T PF03825_consen 134 GSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVKK------------------ 194 (400)
T ss_pred hhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCccc------------------
Confidence 55666655433 233332222 234555555443333222222 2221111000000000
Q ss_pred ccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhc
Q 039943 267 QTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTIS 346 (581)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (581)
....+..+. .++.+...-.+..++.+......+.
T Consensus 195 ---------------------~~~~~~~~l-------------------------lk~~~~~~Fll~~~l~~~~~~~~~~ 228 (400)
T PF03825_consen 195 ---------------------LLGLDALKL-------------------------LKNPRFLVFLLAAFLIGISHAAYYT 228 (400)
T ss_pred ---------------------ccchHHHHH-------------------------hcCccHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0011111111111122222222121
Q ss_pred CCChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 039943 347 QSSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAW 426 (581)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~ 426 (581)
..+.++.+...... ...+....+..+.=+|+ -...+|.-+| .+..+.+.++.+..++=..++
T Consensus 229 f~~~yl~~~gg~~~----------~~~g~~~~l~~~aEi~~-----f~~~~~~~~r---~g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 229 FFSIYLQELGGYSG----------STIGILWALGVVAEIPF-----FFFSGRFLKR---FGIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHcccchh----------hHHHHHHHHHHHHHHHH-----HHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 13333222111000 11111111111111111 1133344444 566678888888888887777
Q ss_pred HHHHHHHhhhhhccCCCCCCCCcccch--HHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHH-HHHHHH
Q 039943 427 AITETVRRNIAINEGISDDPRAVVKMS--AMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGL-GMSVAS 503 (581)
Q Consensus 427 ~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~ig~ 503 (581)
....+ +.. +....+...++|+..++.......|+.+.+|++.|++++++++. ...+|+
T Consensus 291 a~~~~-------------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 291 AYFSD-------------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG 351 (400)
T ss_pred HHhcC-------------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH
Confidence 66421 111 12223345679999999999999999999999999999998765 467999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 504 LVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 504 ~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
.+|..+.|.+.|..+.++. ..+..++.+.+++.++..+.++++.|+
T Consensus 352 ~iG~~igG~l~~~~g~~~~----------~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARGM----------FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHhcchhh----------hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999986542211 123556777777777777777777665
No 93
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.76 E-value=1.4e-21 Score=210.11 Aligned_cols=397 Identities=14% Similarity=0.106 Sum_probs=227.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHH
Q 039943 62 TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLML 141 (581)
Q Consensus 62 ~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (581)
.+.++..+...++..+|.+++|+++|| +|||++++++.++..++.++..+++.. .+.+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~~--------------------~~~~~ 104 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPSY--------------------NNFWM 104 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccccccccc--------------------ccccc
Confidence 346889999999999999999999999 699999999999999999999988721 25778
Q ss_pred HHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc---ccchhhhHHH
Q 039943 142 LYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDN---LGWKVGFGVP 218 (581)
Q Consensus 142 ~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~---~g~~~~f~~~ 218 (581)
++++|++.|++.|+..+..+.++.|..|+ +.|+...++......+|..++..+.-.+.+. .+||+.+.+.
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~-------~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~ 177 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPP-------KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFG 177 (451)
T ss_pred ccccccccccccccccccccccccccccc-------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998 6799999998888889988888665444332 4599999888
Q ss_pred HHHHHHHHHHHHhc--CCcccccCCCCChhhhHHHHHHHHHhhccccccCccccccccCCCCCccccCCcchhhhhhhhh
Q 039943 219 AVISLLSALSFFLA--SPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACI 296 (581)
Q Consensus 219 ~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (581)
++..++.++...+. .|++...+.+.++.++..+ + .+..+..+++..+..+ ..
T Consensus 178 ~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~-------~--~~~~~~~~~~~~~~~~---~~-------------- 231 (451)
T PF00083_consen 178 AIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLR-------K--LRGKEIEDEEIEEIKA---EK-------------- 231 (451)
T ss_pred ccccccccccccccccccceecccccccccccccc-------c--cccccccccccccccc---cc--------------
Confidence 77665444333222 2333222222211111110 0 0000000000000000 00
Q ss_pred ccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHH-HhhcC-CChhheecccCCCCCCCCcccCccccc
Q 039943 297 IKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIA-VTISQ-SSFPVLQASTMDRHITPNFEIPSGSFG 374 (581)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (581)
+ +..+...+|+....... .+++....+.+...+.... ..... .+..... ...+... .......
T Consensus 232 --~------~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~~-----~~~~~~~ 296 (451)
T PF00083_consen 232 --K------ESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNSF-----LATLILG 296 (451)
T ss_pred --c------cccccceeeeecccccc-ccccccccccccccccccccccccccccccccc-ccccccc-----ccccccc
Confidence 0 00000122222111100 1122222221211111111 00101 1111111 0000000 0011111
Q ss_pred chhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhccCCCCCCCCcccch
Q 039943 375 IFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWA-ITETVRRNIAINEGISDDPRAVVKMS 453 (581)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 453 (581)
....+..+ +...+.+|+|||+ .+..+..+++++++..+ .... ..+ . ....+
T Consensus 297 ~~~~~~~~--------~~~~~~~~~GRr~-------~~i~~~~~~~~~~~~~~~~~~~-----~~~-~-------~~~~~ 348 (451)
T PF00083_consen 297 LVNFLGTL--------LAIFLIDRFGRRK-------LLIIGLLLMAICSLILGIIFFL-----GVS-S-------SSWWS 348 (451)
T ss_pred cccccccc--------ccccccccccccc-------cccccccccccccccccccccc-----ccc-c-------ccccc
Confidence 11111111 1223677877773 55566666555555443 1100 000 0 00012
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCc
Q 039943 454 AMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKG 533 (581)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~ 533 (581)
.+.+....+........+.+..+.+..|.+|.+.|+++.++...++++++++++.+.+.+.+..+
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~--------------- 413 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG--------------- 413 (451)
T ss_pred cccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------------
Confidence 22222222222233345567778899999999999999999999999999999888777664321
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhccccccccchhhhh
Q 039943 534 RYDYYYWLLAGLNMASFIYFLACCKAYGPCREEASEAL 571 (581)
Q Consensus 534 ~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (581)
....|.++++++++..++.+++.||+|+++.+|.+++
T Consensus 414 -~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 414 -GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred -ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 1345778888999999999999999999999988765
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.75 E-value=1e-15 Score=164.51 Aligned_cols=151 Identities=11% Similarity=0.069 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCchhhH-HHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGRYPMI-GFGCITYLLGVV 108 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Grr~~~-~~~~~~~~~~~~ 108 (581)
+..+..++.+....++++.|+++.+|++..++|.+.++..+..++..++.|+++||. +||||.+ .++.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 455556666666678888899999999999999999999999999999999999992 2677644 555554544443
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
++...+. . .........++...++.+++.+...+...++..+...++ ++|.+..+.-.
T Consensus 95 ~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~~r~~~~~~r~ 152 (448)
T PRK09848 95 LVFWVPT--D--------------WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQP------QSRARLGAARG 152 (448)
T ss_pred HHHhCcC--C--------------CCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCH------HHHHHHHHHHH
Confidence 3321110 0 000112344455566778888888888888877776653 35777655544
Q ss_pred HH-----HhhHHHHHHHHHHhh
Q 039943 189 VS-----VLASSMVAVTCIVYI 205 (581)
Q Consensus 189 ~~-----~~~g~~~~p~~~~~i 205 (581)
.+ .+++..++|.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 153 IAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 33 345666677665543
No 95
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.75 E-value=4.8e-15 Score=159.94 Aligned_cols=149 Identities=12% Similarity=0.122 Sum_probs=121.5
Q ss_pred hHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 039943 47 PNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ 126 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
....+++..++|-+ ....|+.....++..++.++.|+++|. ||||.+++.+.++..+|.++++.++
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34456888899965 566789999999999999999999999 7999999999999999999999998
Q ss_pred cccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 127 LRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
+...++++..+.|+|.|... .....++|..|. +.|..+..+...........+|.++..+.
T Consensus 130 -----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~-------k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 130 -----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPN-------KWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred -----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhccc-------chhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 88889999999999977765 456668999988 56777766665555555556777776666
Q ss_pred ccccchhhhHHHHHHHHHHHHH
Q 039943 207 DNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 207 ~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
.+.+|||.|++.++...++++.
T Consensus 191 ~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 191 AHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred cCCCcchHHHHHHHHHHHHHHH
Confidence 6679999999998876665543
No 96
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=2.4e-15 Score=161.42 Aligned_cols=174 Identities=11% Similarity=0.139 Sum_probs=122.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCc-hhhHHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGR-YPMIGFGCITYLLGVV 108 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Gr-r~~~~~~~~~~~~~~~ 108 (581)
+..+..++.+..+..+++.|+++.+|++..++|.+..+..+.-++..|+.|+++||. +|| |+.++++.+..++...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 444555555666678899999999999999999999999999999999999999993 366 4556677777777766
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
++...++.. .......+++..++.+.+.........++.+|+.+++ ++|.+..++..
T Consensus 96 l~f~~p~~~-----------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~------~eR~~l~~~r~ 152 (444)
T PRK09669 96 LTFYTPDFG-----------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDP------RERHSLQSWRF 152 (444)
T ss_pred HHHhCCCCC-----------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH------HHHHHHHHHHH
Confidence 555443111 1124556666666677666677777789999987553 46888888888
Q ss_pred HHHhhHHHHHHHHHHhhhc-------cccchhhhHHHHHHHHHHHHHH
Q 039943 189 VSVLASSMVAVTCIVYIQD-------NLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~-------~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
...++|..+++.+...+.. ..+|+..+.+.+++.++..+..
T Consensus 153 ~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~ 200 (444)
T PRK09669 153 ALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCC 200 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 8888888777765433322 2467777776666555544433
No 97
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.74 E-value=2.5e-15 Score=162.57 Aligned_cols=173 Identities=9% Similarity=0.045 Sum_probs=120.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhc----cccCc-hhhHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLAD----SCVGR-YPMIGFGCITYLLGV 107 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laD----r~~Gr-r~~~~~~~~~~~~~~ 107 (581)
+..+..++.+..+.++++.|+++.+|++...+|.+..+..+.-++..|+.|+++| | +|| |+.++++.+..+++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHH
Confidence 4445556666677788999999999999999999999999999999999999999 6 598 566667777777776
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.++...++.+ +......+++..++.+++.........++.+|+.+++ ++|.+..++-
T Consensus 92 ~llf~~p~~~-----------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~------~eR~~l~~~~ 148 (473)
T PRK10429 92 FLLFSAHLFE-----------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDK------REREQLVPYP 148 (473)
T ss_pred HHHHcCCCCC-----------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCH------HHHHHHHHHH
Confidence 6664433111 1113445556666777888888888889999987543 5699988887
Q ss_pred HHHHhhHHHHHHHHHHhhhc-------cccchhhhHHHHHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQD-------NLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~-------~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
....++|+.+.+.+...+.+ ..+|+....+.+++.++..+..
T Consensus 149 ~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~ 197 (473)
T PRK10429 149 RFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIIT 197 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 77777776666554433221 1245555555555444444333
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.73 E-value=1.7e-14 Score=156.59 Aligned_cols=157 Identities=14% Similarity=0.113 Sum_probs=121.3
Q ss_pred hhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 039943 43 MGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPP 122 (581)
Q Consensus 43 ~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (581)
|++. ...+.+++++|++.++.+++.++.. ...++.++.|+++|| +|+|++++++.+++.++.++++++.+- .
T Consensus 44 y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~ala~~~-~---- 115 (591)
T PTZ00207 44 YAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLFALTFQE-V---- 115 (591)
T ss_pred HHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhcc-c----
Confidence 3433 3445678899999999999887744 344667789999999 799999999999999999999997310 0
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHH-HHHH
Q 039943 123 ACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMV-AVTC 201 (581)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~p~~ 201 (581)
-..+++.+++.|++.|+|.+...+.....+.++||+ +|+.+.++...+.++|+++ +++.
T Consensus 116 ------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~--------~RG~a~Gi~~~~~gLGsaI~~~l~ 175 (591)
T PTZ00207 116 ------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS--------NRGAVVAIMKTFTGLGSAILGSIQ 175 (591)
T ss_pred ------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh--------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 012788899999999999999888889999999974 5899999999999999975 5555
Q ss_pred HHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 202 IVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 202 ~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
.+++.+ +|+..|++.+++.++..++.
T Consensus 176 ~~l~~~--~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 176 LAFFSD--NTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHH--hHHHHHHHHHHHHHHHHHHH
Confidence 555543 57777777766655444433
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=3.4e-15 Score=163.63 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=126.9
Q ss_pred hhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccc
Q 039943 55 GEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESA 134 (581)
Q Consensus 55 ~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (581)
+.+..+.....+..+++.++..+|+++.|.++|| +|||+++++++++.+++.++.++++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 5667788888999999999999999999999999 7999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhh
Q 039943 135 TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVG 214 (581)
Q Consensus 135 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~ 214 (581)
+++.+++.|++.|++.++...+...+++|.+++ +.|+.+..+ ......++.++|..++++.. +||+.
T Consensus 170 ---~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~-------~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~ 236 (521)
T KOG0255|consen 170 ---NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP-------KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWL 236 (521)
T ss_pred ---cHHHHHHHHHHHHhhccchhHHhHhhheeecCc-------chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHH
Confidence 899999999999999999999999999999999 679999998 77777888888888888877 89999
Q ss_pred hHHHHHHHHHHHHH
Q 039943 215 FGVPAVISLLSALS 228 (581)
Q Consensus 215 f~~~~~~~~i~~~~ 228 (581)
+++..+..++.++.
T Consensus 237 ~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 237 FWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988776666555
No 100
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=5.8e-16 Score=166.57 Aligned_cols=434 Identities=15% Similarity=0.071 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHHhhhhhH---HHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPN---MILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~---l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.+.+..++.++..+++... +-..++++++.+..+.+|+.++......+..|+.+.+.|| +|.|++.++|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHHH
Confidence 56666777777777765533 3456678999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHH-HHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSA-LGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
|.++..+++ +++.+++. =++.|+|.|..+......++.+|++ +|+.+.
T Consensus 124 g~~lssF~~-----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k--------kR~lA~ 172 (509)
T KOG2504|consen 124 GLLLSSFAT-----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK--------KRALAT 172 (509)
T ss_pred HHHHHHHHh-----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH--------HHHHHH
Confidence 999999998 66665555 5667899999999999999988764 799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccc
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKL 264 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (581)
++...+..+|..+=|.+.-++.+..|||+.+++.+.+.+-......+.+|...+.++..++ +..+ .....+.
T Consensus 173 Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~--~~~~------~~~~~~~ 244 (509)
T KOG2504|consen 173 GIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEK--DLRN------SAASVES 244 (509)
T ss_pred hhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhh--hhcc------ccccccc
Confidence 9999999999999999999999999999999988777665555555544433332222100 0000 0000000
Q ss_pred cCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchh-hHHHHHhHHhhHhHHHhhHHHHH
Q 039943 265 SSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVD-QVEELKALIKVIPLWSTGIMIAV 343 (581)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 343 (581)
. ....+...........+ ..........+.+++.. +...+....+.+. ..++...+...+...+....+..
T Consensus 245 ~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~ 316 (509)
T KOG2504|consen 245 T----PKPVELRISERDSGLKK-LSLSNLATLKRGPDKWR---NSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV 316 (509)
T ss_pred c----ccccccccccCCCCCCc-ccccchhhhhhCCcccc---ccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 0 00000000000000000 00000000000000000 0000000000011 11111111111111111111111
Q ss_pred hhcCCChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHH
Q 039943 344 TISQSSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASM 423 (581)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~ 423 (581)
.+...+.+.. ....+.... . .....++..+.+..++... ++++.. .+......++++.++++.
T Consensus 317 p~~~l~~~~~-~~g~~~~~a-a--~l~Siigi~~i~gRi~~G~--------laD~~~-----~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 317 PFVYLPSYAK-SLGLSSNDA-A--FLLSIIGVSDIIGRIILGL--------LADKPG-----IRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHh-hcCCChhhh-H--HHHHHHHHhhhhhhhhhhh--------hcCccc-----cchHHHHHHHHHHHHHHH
Confidence 0000111111 111111100 0 0001111122222222211 333321 233445566666666666
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHH
Q 039943 424 AAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVAS 503 (581)
Q Consensus 424 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 503 (581)
++.... .+.+.++...++.|...+...........+..+.+.-+.+.|+..+++.++.
T Consensus 380 ~~~p~~----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~ 437 (509)
T KOG2504|consen 380 LFLPFA----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGA 437 (509)
T ss_pred HHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHH
Confidence 444332 2455666667777877777777766778888999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccccc
Q 039943 504 LVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPCR 564 (581)
Q Consensus 504 ~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~ 564 (581)
.+++.+.+.+.|.++ +|+..|++.+++.+++..+.++...+.+++.
T Consensus 438 l~gpPiag~~~d~tg---------------~Y~~~f~~~g~~~~~s~~~~~~~~~~~~~~~ 483 (509)
T KOG2504|consen 438 LVGPPIAGLLYDITG---------------NYDHAFYFCGLCFLLSAVLLLILRECLKRRE 483 (509)
T ss_pred HcCcccceeeeeccC---------------CeeeehhhcChHHHHHHHHHHHhHHHHHhcc
Confidence 999999998877542 3677788888888887766555542444443
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.72 E-value=2.6e-16 Score=174.84 Aligned_cols=200 Identities=16% Similarity=0.267 Sum_probs=149.6
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
++.++.......+......+......+.++++|+++.++.|++.+.+.+++.++.++.|+++|| +||||.+.+++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHH
Confidence 3333344444455555666777777788899999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhhhccc-CC---------------CCccccc----------cccccccc--chhHHHHHHHHHHHHHhcccc
Q 039943 105 LGVVLLWLTTILSQ-AQ---------------PPACDQL----------RSDCESAT--WSQLMLLYSALGLMSLGGGGI 156 (581)
Q Consensus 105 ~~~~~~~~~~~~~~-~~---------------~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~l~g~~~g~~ 156 (581)
++.+++++...+.. .. ...|.+. .++|+... ...+..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 99999888642110 00 0001000 00111111 113567889999999999999
Q ss_pred chhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccc----------------------cchhh
Q 039943 157 RSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNL----------------------GWKVG 214 (581)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~----------------------g~~~~ 214 (581)
.+...+++.|.+|+ ++|+...++++.+..+|.++|+++++++.+.+ +|+..
T Consensus 190 ~~~~~~~i~d~~~~-------~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 190 FPLGISYIDDFAKS-------KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred hhcCchhhhccCCc-------cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 99999999999998 66999999999999999999999999877532 26667
Q ss_pred hHHHHHHHHHHHHHHHhc
Q 039943 215 FGVPAVISLLSALSFFLA 232 (581)
Q Consensus 215 f~~~~~~~~i~~~~~~~~ 232 (581)
|++.+++.++..+.++..
T Consensus 263 Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 263 FLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 877777666555444443
No 102
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.71 E-value=1.9e-14 Score=151.74 Aligned_cols=176 Identities=12% Similarity=-0.038 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHH--HHHHHHHHHHHHHHH-HHhhccccCchhhHHHHHHH-H
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNV--LLIWTAATNFLPIIG-AFLADSCVGRYPMIGFGCIT-Y 103 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i--~~~~~~~~~i~~~~~-G~laDr~~Grr~~~~~~~~~-~ 103 (581)
+..+....+.+.+-+..+.+.+|.|++ +.|+|.++.|.. .....+...+..|+. ++..|| +||||.+++.+.+ .
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHH
Confidence 344455556666776667788888886 569999999997 355577776677777 558999 6999997666533 2
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.+....+..... .......++....+.++..+...+...++..|..++ ++++..
T Consensus 81 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~-------~~~~~~ 134 (390)
T TIGR02718 81 SACLASLALVGP-------------------DVAGAGWAVGLLACASLASATQDIATDGMAAEHFNG-------RTLAKG 134 (390)
T ss_pred HHHHHHHHcCCc-------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hhhhHH
Confidence 222222222110 001223334445555566666677777777776665 456777
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+....+..+|..+|+...+++.+..||+..|++.++..++..+..+.
T Consensus 135 ~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 135 NAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 777777778899999988889999999999999988876665554433
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.71 E-value=9.1e-15 Score=157.52 Aligned_cols=386 Identities=11% Similarity=0.028 Sum_probs=219.4
Q ss_pred CCCCchHH-HHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccC-----chhh
Q 039943 22 KGGLRTLP-FIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVG-----RYPM 95 (581)
Q Consensus 22 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~G-----rr~~ 95 (581)
..+++..+ .+....+.+.+. +.+...+++++++++|++.++.+...+...+...+-.+ .|.++|| ++ ||+.
T Consensus 21 ~~~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~ 97 (468)
T TIGR00788 21 SFHPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWY 97 (468)
T ss_pred cCCcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHH
Confidence 33344433 333455667776 66777888899999999999999999999998888655 9999999 67 7777
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcc
Q 039943 96 IGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENK 175 (581)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (581)
++++.++.. ...+..++. .+.+.....+.+++.+++.+....+..++..|..+ +++
T Consensus 98 l~~~~~l~~-~~~~~~l~~--------------------~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~-- 153 (468)
T TIGR00788 98 LVLSGLLGS-AILYGLLPG--------------------KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP-- 153 (468)
T ss_pred HHHHHHHHH-HHHHHhccc--------------------ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC--
Confidence 777765553 122222221 01123344447888999999999999999999998 332
Q ss_pred cchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHH
Q 039943 176 SKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVA 255 (581)
Q Consensus 176 ~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (581)
+.++...+..+...++|..+|+.++|++.+..+|+..|++.+...++..+...+..++.....|+.+.....
T Consensus 154 --~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~------ 225 (468)
T TIGR00788 154 --SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEM------ 225 (468)
T ss_pred --CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchh------
Confidence 445556667777788999999999999999899999999988776666443333322110011110000000
Q ss_pred HHhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHH
Q 039943 256 SYKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLW 335 (581)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (581)
+... ... ...+..+. .++. .......+.....+.+
T Consensus 226 -----------------~~~~-----~~~----~~~~~~~~----------------~~~~--l~~~l~~~~i~~~l~f- 260 (468)
T TIGR00788 226 -----------------NMAL-----LTL----GVLANVKV----------------QILG--LRGAIQLLEIAKPLIF- 260 (468)
T ss_pred -----------------hhhh-----hhh----hHHHHHHH----------------HHHH--HHHHHhcHHHHHHHHH-
Confidence 0000 000 00000000 0000 0000001111111111
Q ss_pred HhhHHHHHhhcC--CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHH
Q 039943 336 STGIMIAVTISQ--SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMG 413 (581)
Q Consensus 336 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~ 413 (581)
..+.+..... .+.++.+.. .++ .++...+.......+ . ..+...+.+|+.+| .+.++.+.
T Consensus 261 --ifl~~~~~~~~~~~~f~~~~~----~lG----~s~~~~G~~~~~~~v-~----~i~g~~~~~~~~~~---~~~r~~l~ 322 (468)
T TIGR00788 261 --IFLSYANLPGASGSVFCATTQ----CLP----GGPSFSGMSKVVGNL-G----SLCGVGGYDRFLKT---FPYRLLFG 322 (468)
T ss_pred --HHHHHhhcCCCCceeEEEEcc----cCC----CCcchhhhHHHHHHH-H----HHHHHHHHHHHHhh---CCHHHHHH
Confidence 1110111111 222222211 121 333334333322221 1 11122244444444 56667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHH
Q 039943 414 IGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASA 493 (581)
Q Consensus 414 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g 493 (581)
++.++.+++.+....... + .....| ..+.+++....++.+++.++...+...++.+.+|++.+|+..+
T Consensus 323 ~~~~l~~~~~~~~~~l~~-~--~~~~~g---------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~a 390 (468)
T TIGR00788 323 VTTLLYTLSSLFDLILVK-R--WNLAFG---------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFA 390 (468)
T ss_pred HHHHHHHHHHhCceeeee-c--cccccC---------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHH
Confidence 887777766543221100 0 000000 0122344445677788888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh
Q 039943 494 LHGLGMSVASLVASFIMNAVDEIT 517 (581)
Q Consensus 494 ~~~~~~~ig~~i~~~i~~~i~~~~ 517 (581)
+.+...++|..+++.+.+.+.+..
T Consensus 391 l~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 391 LLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999998888887654
No 104
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=8.8e-15 Score=147.14 Aligned_cols=136 Identities=11% Similarity=0.095 Sum_probs=119.7
Q ss_pred hhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 039943 44 GLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPA 123 (581)
Q Consensus 44 ~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (581)
...-.+.+.+++.|+++..|++++..++..++.++.++.|++.+| +|+|+.++.++.++++|..+..=++
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa--------- 99 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAA--------- 99 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhh---------
Confidence 355667788889999999999999999999999999999999999 7999999999999999998886554
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 124 CDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
+..++..++.+.++.|.|.+..+.+...+++.+.+++ .-..-.++.+....+|++++|++++
T Consensus 100 -----------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~-------~a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 100 -----------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPE-------SAAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred -----------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch-------hHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 2347889999999999999999999999999999883 3555567777788899999999999
Q ss_pred hhhc
Q 039943 204 YIQD 207 (581)
Q Consensus 204 ~i~~ 207 (581)
++..
T Consensus 162 ~lil 165 (422)
T COG0738 162 SLIL 165 (422)
T ss_pred HHHH
Confidence 8776
No 105
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.70 E-value=7.1e-16 Score=152.95 Aligned_cols=119 Identities=13% Similarity=-0.010 Sum_probs=107.2
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccc
Q 039943 57 YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATW 136 (581)
Q Consensus 57 ~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (581)
.+.+..-+|.+-+.|.+..++.++..|.++|| +|||++++++++..++..++.+++.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~S~---------------------- 119 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWALSR---------------------- 119 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 33455668999999999999999999999999 6999999999999999888888888
Q ss_pred hhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 137 SQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 137 ~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
++..++++|++.|+.-|-. ....++++|.+++ +.|+.+++....+..+|..+||.++|++.+
T Consensus 120 -~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~se-------k~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 -NFAAFVLARFLGGIFKGNL-SVIRAIISDVVSE-------KYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -HHHHHHHHHHhhhhccCch-HHHHHHHHhhcCh-------hhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 7778888899999998765 6788999999998 669999999999999999999999999987
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.69 E-value=4.4e-15 Score=158.64 Aligned_cols=356 Identities=13% Similarity=0.093 Sum_probs=219.6
Q ss_pred HHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhc----cccCchh-hHHHHHHHHHHHHHHH
Q 039943 36 AFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLAD----SCVGRYP-MIGFGCITYLLGVVLL 110 (581)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laD----r~~Grr~-~~~~~~~~~~~~~~~~ 110 (581)
+..++.......+++.|+++.+|+++...+.+..+..+..++..|+.|+++| | +|||| .++++.++.+++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHh
Confidence 3444555556678889999999999999999999999999999999999999 7 69765 5556778888887777
Q ss_pred HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHH
Q 039943 111 WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVS 190 (581)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (581)
..... .. .........+.+..++..++.........++.+|..++++ +|.+..+.-...
T Consensus 90 f~~~p-~~--------------~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~------~R~~l~~~~~~~ 148 (428)
T PF13347_consen 90 FSPPP-AG--------------LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD------ERTRLSSWRMIF 148 (428)
T ss_pred hcccc-ch--------------hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh------hhhhHHHHHHHH
Confidence 76520 00 0011134455677777789999999999999999988654 588888888888
Q ss_pred HhhHHHHHHHHHHhhhccc-------cchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcccc
Q 039943 191 VLASSMVAVTCIVYIQDNL-------GWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIK 263 (581)
Q Consensus 191 ~~~g~~~~p~~~~~i~~~~-------g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (581)
..+|..+...+.+.+.+.. +|++...+.+++.++..++.....++.+++.+++++
T Consensus 149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~------------------ 210 (428)
T PF13347_consen 149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK------------------ 210 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc------------------
Confidence 8888866665555544322 578777777666665555544433330000000000
Q ss_pred ccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHH
Q 039943 264 LSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAV 343 (581)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (581)
..++++......++ |.....+.........+.
T Consensus 211 -----------------------------------------------~~~~~~~~~~~~~n-r~~~~l~~~~~~~~~~~~ 242 (428)
T PF13347_consen 211 -----------------------------------------------KISLRDSLRSLFRN-RPFRILLLAFFLQWLAFA 242 (428)
T ss_pred -----------------------------------------------ccccccchhhhccc-chHHHHHHHHHHHHhhhh
Confidence 00000000000001 111111111111111111
Q ss_pred hhcC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 039943 344 TISQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTAS 422 (581)
Q Consensus 344 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~ 422 (581)
.... ..++.......+ .. ...+.....+..++..|+. .++.+|+++| +.+..+.++.+++
T Consensus 243 ~~~~~~~y~~~~vl~~~-~~-------~~~~~~~~~~~~~v~~~~~----~~l~~r~gk~-------~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 243 LMNTFLPYYFTYVLGNE-GL-------ISIFMLIFFVASIVGSPLW----GRLSKRFGKK-------KVYIIGLLLAALG 303 (428)
T ss_pred hhhhHHHHHHHHHhcCc-hh-------hHHHHHHHHHHHHHHHHHH----HHHHHHccce-------eehhhhHHHHHHH
Confidence 1111 111111111111 00 1112223344444444543 4477777666 4777777777777
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCC-------chhhHHHHHHH
Q 039943 423 MAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELP-------RSMSSIASALH 495 (581)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~ 495 (581)
.++..... ..+.++..+..++.+++.+..++..++...|..+ ++..|...|++
T Consensus 304 ~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~ 363 (428)
T PF13347_consen 304 FLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVN 363 (428)
T ss_pred HHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhh
Confidence 77665543 1266777888899999999988888888888776 35579999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh
Q 039943 496 GLGMSVASLVASFIMNAVDEITK 518 (581)
Q Consensus 496 ~~~~~ig~~i~~~i~~~i~~~~~ 518 (581)
++...++..+++.+.+.+.+..+
T Consensus 364 ~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 364 SFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998887653
No 107
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=2.4e-15 Score=150.04 Aligned_cols=148 Identities=17% Similarity=0.106 Sum_probs=135.8
Q ss_pred hcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccccccccccc
Q 039943 56 EYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESAT 135 (581)
Q Consensus 56 ~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (581)
.++-++++.|++...+.+.+.+..++.|.+.|| +|+|-.+++|++++...++++++.+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 466788999999999999999999999999999 7999999999999999999999998
Q ss_pred chhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhh
Q 039943 136 WSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGF 215 (581)
Q Consensus 136 ~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f 215 (581)
+++.++++|.++|+|.+....+..++++|.||++. +|++++|..-.+..+|-.+||+.+|.+.+..|++.+|
T Consensus 158 --sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~------er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPF 229 (464)
T KOG3764|consen 158 --SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN------ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPF 229 (464)
T ss_pred --hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch------hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcH
Confidence 78899999999999999999999999999999854 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 039943 216 GVPAVISLLSALSFFLAS 233 (581)
Q Consensus 216 ~~~~~~~~i~~~~~~~~~ 233 (581)
++.+++.++...+-++..
T Consensus 230 lVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 999888777665544433
No 108
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=4.5e-14 Score=139.22 Aligned_cols=154 Identities=13% Similarity=0.042 Sum_probs=124.1
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
....+.+-+....|.+..|..+++.....++.+++...|.++|+ +|||+.+........+..++-+.++
T Consensus 96 ~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~is~~sp---------- 164 (528)
T KOG0253|consen 96 LLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVISGASP---------- 164 (528)
T ss_pred HHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHhhcCCC----------
Confidence 34445556667788999999999999999999999999999999 7999999988888888777777777
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
++..++..|.+.|+|.|+ .|...++-.|..|... |....-.. ....+|.++...+.-.
T Consensus 165 -------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~-------r~~~~V~~-~~waig~v~ea~law~ 222 (528)
T KOG0253|consen 165 -------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH-------RWLLTVMS-FFWAIGQVFEALLAWG 222 (528)
T ss_pred -------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC-------CCcchhHH-HHHHHHHHHHHHHHHH
Confidence 788899999999999999 8999999999998844 55555544 5566888888877666
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 205 IQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 205 i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
...++||||......+...+.....++
T Consensus 223 vm~~~gwr~~l~~~~~pl~~~a~f~~w 249 (528)
T KOG0253|consen 223 VMSNFGWRYLLFTSSTPLMFAARFLVW 249 (528)
T ss_pred HHHhhhHHHHHHHHHhHHHHHHHHHhh
Confidence 777889999887777655555444444
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.65 E-value=3.1e-14 Score=147.17 Aligned_cols=389 Identities=10% Similarity=0.031 Sum_probs=219.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+..+......++..+++-...++.+.|++++.|++.+|.|.+.++..+...+.+|+.|.++|| +|.||-++..+....+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHH
Confidence 345555565666666655677999999998899999999999999999999999999999999 7977765544333221
Q ss_pred --HHHHH-HHhhhcccCCCCcccccccccccccchhH-HHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 106 --GVVLL-WLTTILSQAQPPACDQLRSDCESATWSQL-MLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 106 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+-... .+.+-+. .+. ...+++-+..++...+..|...+++.+.. ++.+
T Consensus 86 l~~pff~~v~~pll~-------------------~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s---------r~~~ 137 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQ-------------------SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS---------RRNG 137 (412)
T ss_dssp TCHHHHHHTHHHHHH-------------------TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH---------HHHS
T ss_pred HHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH---------HHhc
Confidence 22222 1222000 011 11222222334444455566666544432 2344
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcc
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRH 261 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (581)
-=+|-..+...+|.+++..++|++.+ .+-+..|++.....++..++..+.++..+++.+..+..
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~--------------- 201 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADAL--------------- 201 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS---------------
T ss_pred CCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc---------------
Confidence 44666677888999999999999876 45566778766554444443333322111110000000
Q ss_pred ccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHH
Q 039943 262 IKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMI 341 (581)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (581)
.. . +.+.+.-........++....+.+.......
T Consensus 202 --~~-------------------~-------------------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~ 235 (412)
T PF01306_consen 202 --GA-------------------K-------------------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAI 235 (412)
T ss_dssp --SS--------------------------------------------------HHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred --cc-------------------C-------------------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 00 0 0000000000111123333333333333333
Q ss_pred HHhhcC--CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHH
Q 039943 342 AVTISQ--SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFS 419 (581)
Q Consensus 342 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~ 419 (581)
+..+.| +.++.. ..+.. ......++..+.+.++.=.+++ .+..++.+|. +++..+.++..++
T Consensus 236 Y~vfdqqf~~y~~~---~f~~~-----~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~ri-------g~k~~Lllag~i~ 299 (412)
T PF01306_consen 236 YDVFDQQFPIYFAS---FFQSA-----GQGNQMYGYLWSVQVFLEALMM-FFSPWLINRI-------GAKNLLLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHHHH---TSSSH-----HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---Hhccc-----ccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhc-------ChHhHHHHHHHHH
Confidence 333433 222211 11110 0112223333333222222221 1233366664 4446777777777
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHH-HHH
Q 039943 420 TASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALH-GLG 498 (581)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~ 498 (581)
++=....+.. .+.+++.+.-.++++-..+......-|+.+.+|++..++...+. ++.
T Consensus 300 ~iRi~~~~~~----------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~ 357 (412)
T PF01306_consen 300 AIRIIGSGFA----------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFA 357 (412)
T ss_dssp HHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTT
T ss_pred HHHHHHHhhh----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHH
Confidence 7776666553 36677888889999988888899999999999999999999885 788
Q ss_pred HHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 499 MSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 499 ~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
.+++.++.+.+.|.+.|..| ++..|++++.+.+...++..+..++
T Consensus 358 ~~~~~~i~s~~~G~lyd~~G----------------~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 358 KQIGIIILSPLAGYLYDRIG----------------FQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHhhhHHhhHhhcC----------------cHHHHHHHHHHHHHHHHHheeeecC
Confidence 99999999999999998653 5678888888888777776666554
No 110
>PRK11462 putative transporter; Provisional
Probab=99.65 E-value=2.2e-13 Score=146.56 Aligned_cols=173 Identities=18% Similarity=0.231 Sum_probs=123.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCchh-hHHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGRYP-MIGFGCITYLLGVV 108 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~ 108 (581)
+..+..++.+..+..++..|+++.+|+++..+|.+..+.-+.-++.-|+.|+++||. +|||| -++++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 444455666666677899999999999999999999999999999999999999972 68864 45566677777776
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
++...+.+. .......+++.-++..++.........++.+|..++. ++|.+..++..
T Consensus 96 llf~~p~~s-----------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~------~eRt~l~s~r~ 152 (460)
T PRK11462 96 LAYSTPDLS-----------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDP------TQRISLQSWRF 152 (460)
T ss_pred HHHhCCCCC-----------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCH------HHHHHHHHHHH
Confidence 665544111 1112445556666677888888888889999988764 56999999999
Q ss_pred HHHhhHHHHHHHHHHhhhcc-------ccchhhhHHHHHHHHHHHHH
Q 039943 189 VSVLASSMVAVTCIVYIQDN-------LGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~-------~g~~~~f~~~~~~~~i~~~~ 228 (581)
.+.++|..+++.+...+... .+|+....+.+++.++...+
T Consensus 153 ~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 153 VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888887665444332 24665555555444444333
No 111
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.63 E-value=4.4e-13 Score=133.05 Aligned_cols=350 Identities=14% Similarity=0.171 Sum_probs=226.6
Q ss_pred HHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 039943 48 NMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQL 127 (581)
Q Consensus 48 ~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (581)
.+..-+++++|+|.+.+|+++++-.+...+..++..+++.| +|.++.+..++++..+|.++=...
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~~-------------- 97 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSLG-------------- 97 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc--------------
Confidence 34456788999999999999999999999999999999999 799999999999988888775554
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 128 RSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
+...++.+-.+.|.|.+......+.++-+.||+ +-+..+++|....++|+++++.+...+.+
T Consensus 98 ----------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk--------~~~~mtglYs~sl~~~aaLaa~lavpla~ 159 (395)
T COG2807 98 ----------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK--------RVGLMTGLYSTSLGAGAALAAALAVPLAQ 159 (395)
T ss_pred ----------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc--------chhhHHhHHHHHHHHHHHHHhhhhhHHHH
Confidence 356688888999999999999999999999996 57889999999999999999999988888
Q ss_pred cc-cchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccCccccccccCCCCCccccCCc
Q 039943 208 NL-GWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLVPSE 286 (581)
Q Consensus 208 ~~-g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (581)
+. ||+....+=+...++++++++.-..+.+....+... .+
T Consensus 160 ~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~------------------~~--------------------- 200 (395)
T COG2807 160 HSGGWRGALGFWALLALLALLIWLPQALREQAASIATKL------------------VS--------------------- 200 (395)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHhhhccccccccccccc------------------cc---------------------
Confidence 77 799998887777777777665532211100000000 00
Q ss_pred chhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-CChhheecccCCCCCCCC
Q 039943 287 NLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-SSFPVLQASTMDRHITPN 365 (581)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 365 (581)
...-|+ +.......+.+-+....+++.+.+ +..+..+ ..+..
T Consensus 201 -----------------------~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~--G~sa~---- 243 (395)
T COG2807 201 -----------------------VRKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR--GLSAA---- 243 (395)
T ss_pred -----------------------cccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc--CCCHH----
Confidence 001111 011111122222333444444444 3333222 11111
Q ss_pred cccCcccccchhhHHHHHHhhhccchhhh-HhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC
Q 039943 366 FEIPSGSFGIFTIITVILWIGFYDRILQP-IASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISD 444 (581)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 444 (581)
..+..-.+..+.-.|. .+..| +++|..++ +.........+.++++.+.+.+.
T Consensus 244 ------~aG~llsl~~l~~~~~--~ll~P~la~R~~n~------r~~~~~~~~~~l~G~~G~~~~P~------------- 296 (395)
T COG2807 244 ------EAGSLLSLMQLAQLPT--ALLIPLLARRSKNQ------RPLVVLALLLMLVGLVGLLLAPG------------- 296 (395)
T ss_pred ------HhhhHHHHHHHHHHHH--HHHHHHHHHHhccc------chHHHHHHHHHHHHHHHHHHhhh-------------
Confidence 1111111111111111 11222 45553333 23444445555555555444331
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCC-chhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCC
Q 039943 445 DPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELP-RSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKE 523 (581)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~ 523 (581)
...++| .+++|+|.+..+|....+...... ++..+..+|+.+.+..+=..+||.++|.+.|.++
T Consensus 297 ------~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g----- 361 (395)
T COG2807 297 ------QLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG----- 361 (395)
T ss_pred ------hHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC-----
Confidence 223334 477888888888888888777665 5667778888888899999999999999999776
Q ss_pred CCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhc
Q 039943 524 GWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCK 558 (581)
Q Consensus 524 ~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~ 558 (581)
+| ...+..++.+.++..++-+...|
T Consensus 362 sw----------~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 362 SW----------SAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred Ch----------HHHHHHHHHHHHHHHHHHhhcch
Confidence 56 55566666666665555444433
No 112
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.61 E-value=2.3e-13 Score=145.24 Aligned_cols=151 Identities=14% Similarity=0.049 Sum_probs=128.8
Q ss_pred hhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccccccccc
Q 039943 54 CGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCES 133 (581)
Q Consensus 54 ~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (581)
.++.++..++.+.+.++|.++++++.+++|.+.|| +.-.+.+....+.+.+-.++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 46788999999999999999999999999999999 6977777777666666665555566
Q ss_pred ccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh------c
Q 039943 134 ATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ------D 207 (581)
Q Consensus 134 ~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~------~ 207 (581)
+++.+++.|++.|+.+++.+|....+++.+|.+ ++|+..+++++....+|+++|.++...+. .
T Consensus 133 ----s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~-------~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 133 ----SFPGLIALRFLLGLFESGGWPGVVAILGNWYGK-------SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred ----hhHHHHHHHHHHHHHhcccchHHHHHHHhhcCh-------hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 788899999999999999999999999999998 67999999999999999999998877753 3
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhcCCc
Q 039943 208 NLGWKVGFGVPAVISLLSALSFFLASPF 235 (581)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (581)
..||||.|++.+++.++..++.++..|.
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecC
Confidence 4689999999998877766665555443
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.4e-12 Score=136.31 Aligned_cols=362 Identities=14% Similarity=0.134 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCc-hhhHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGR-YPMIGFGCITYL 104 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Gr-r~~~~~~~~~~~ 104 (581)
..-.+..+..++.+-.+..++..|.++.+|+++..+|.+..+.-+.=++.-|+.|.+.||. +|| |+-++++.+.++
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~ 94 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFA 94 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHH
Confidence 3344556666677777889999999999999999999999999999999999999999973 466 466777778888
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
+..+++..++++.. +.+....++.-.+.+++.....-...++.+|+.+++ ++|.+..
T Consensus 95 i~~~l~F~~p~~~~-----------------~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~------~ER~~l~ 151 (467)
T COG2211 95 IVAVLLFITPDFSM-----------------TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDP------QERASLT 151 (467)
T ss_pred HHHHHHHcCCCccc-----------------CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCH------HHHHHHH
Confidence 88888888763221 235666777788888998888888899999987764 5699999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhc-------cccchhhhHHHHHHHHHHHHHHHhcCCc-ccccCCCCChhhhHHHHHHHH
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQD-------NLGWKVGFGVPAVISLLSALSFFLASPF-YVQSKANTSLLTGLIQVLVAS 256 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~-------~~g~~~~f~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 256 (581)
++-....++|..+...+.+.+.. ..||+..-.+.+++..+.++.++...++ ..+..+.++..
T Consensus 152 s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~---------- 221 (467)
T COG2211 152 SWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV---------- 221 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc----------
Confidence 99988888887776665554432 2356666555555555554444432221 11111110000
Q ss_pred HhhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHH
Q 039943 257 YKNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWS 336 (581)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (581)
++.+.+.- ......|.++..+.
T Consensus 222 ------------------------------~~~~~~~~-------------------------~~~~~Nrp~~~~l~--- 243 (467)
T COG2211 222 ------------------------------KLKLKDSF-------------------------LLIFKNRPLLLLLL--- 243 (467)
T ss_pred ------------------------------cccHHHHH-------------------------HHHHccchHHHHHH---
Confidence 00000000 00001111111111
Q ss_pred hhHHHHHhhcC-CChhheecc-cCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHH
Q 039943 337 TGIMIAVTISQ-SSFPVLQAS-TMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGI 414 (581)
Q Consensus 337 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~ 414 (581)
.....+...+. .+...+... .+.+.- ..+...........++..++ ..++.+|+|+| +...+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~-----l~~~~~~~~~~~~~l~~~~~----~p~L~~~~gkk-------~~~~~ 307 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPE-----LFAYLLLLASGAGLLIGLIL----WPRLVKKFGKK-------KLFLI 307 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChH-----HHHHHHHHHHHHHHHHHHHh----HHHHHHHhchH-------HHHHH
Confidence 22223333333 222222211 111110 10101111111111111222 33466666555 67888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccC-------Cchh
Q 039943 415 GLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSEL-------PRSM 487 (581)
Q Consensus 415 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------P~~~ 487 (581)
+.++.+++.+...+.. ..+.+..++..++.++|.+...+..++.+.+.. -++.
T Consensus 308 ~~~~~~i~~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~ 367 (467)
T COG2211 308 GLLLLAVGYLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRR 367 (467)
T ss_pred HHHHHHHHHHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCc
Confidence 8888877777666542 224556666678888888888888888877653 3467
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 039943 488 SSIASALHGLGMSVASLVASFIMNAVDEIT 517 (581)
Q Consensus 488 rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~ 517 (581)
.|...|.+++++-+|..++..+.+++.+..
T Consensus 368 eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 368 EGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 788899999999999999999999998765
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=5.8e-13 Score=140.64 Aligned_cols=176 Identities=9% Similarity=0.063 Sum_probs=133.7
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 23 GGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
+++|..+..+...+.....++....++|.|+++++|++..+.+++.+...++..++.++.|+++|| +|||+.+..+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~ 291 (393)
T PRK15011 213 RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVA 291 (393)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHH
Confidence 344444444444444444555566789999999999999999999888888888899999999999 7999988877665
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
..+......... +.+.+++.+++.+++.|...+...++..|.+|+ +|++
T Consensus 292 ~~~~~~~~~~~~-----------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~--------~~g~ 340 (393)
T PRK15011 292 GVCFYAGMLMAH-----------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG--------QAGS 340 (393)
T ss_pred HHHHHHHHHHHh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------Ccch
Confidence 555444443333 455566777777777777667777788888875 3888
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+.++++...++|..++|.++|++.+.+||+..|++.+++.+++++..+
T Consensus 341 ~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 341 ATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 999988888999999999999999989999999888777776665544
No 115
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.49 E-value=1.1e-12 Score=142.58 Aligned_cols=178 Identities=12% Similarity=0.124 Sum_probs=131.6
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
++.+.......++..+.+|++..++|.|+++.+|++..+.+++.....++..++.++.|+++|| +|||+++..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence 3333333344455677888999999999988899999888888888889999999999999999 799999988876544
Q ss_pred HHHHH-HHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 105 LGVVL-LWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 105 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
++.+. ..... ..+...+++++++.|++.+...+....++.|.+|+ +.|+++
T Consensus 328 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~-------~~Rg~~ 379 (490)
T PRK10642 328 VLAIPAFILIN---------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPT-------HIRYSA 379 (490)
T ss_pred HHHHHHHHHHh---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------ccchHH
Confidence 43332 22222 11456677888888888777777788889999998 669999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhccc-cchhhhHHHHHHHHHHHHHHHh
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNL-GWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~-g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
++..+....+++.++|.+.+++.+.. +|+.++++..+..+++++..++
T Consensus 380 ~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 380 LAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 99866666777888999999987754 4676666555555555444443
No 116
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=9.7e-13 Score=142.18 Aligned_cols=176 Identities=11% Similarity=0.024 Sum_probs=133.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.++.+.+..++....++++..++|.|+++++|++..++++..+...++..++.+++|+++|| +|||+.+.....+..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHH
Confidence 45666677777777778888999999999999999999999999999999999999999999 69998877655444443
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
..+..+.. ..+....++.+++.|+...+..........|.+|+ +.|+++.++
T Consensus 338 ~~~~~~~~---------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~-------~~~g~a~gi 389 (467)
T PRK09556 338 FTLGVYQH---------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPK-------KAIGVANGI 389 (467)
T ss_pred HHHHHHHh---------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch-------hhHHHHHHH
Confidence 32222221 01344555667777755433333334566799988 679999999
Q ss_pred HHHHHhh-HHHHHHHHHHhhhc------------cccchhhhHHHHHHHHHHHHHHHh
Q 039943 187 YYVSVLA-SSMVAVTCIVYIQD------------NLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 187 ~~~~~~~-g~~~~p~~~~~i~~------------~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+...++ |..++|.+.|++.+ ..||+..|++.+++.+++.+..+.
T Consensus 390 ~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 390 KGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 9988886 77999999999999 578999998887777766555443
No 117
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.48 E-value=1.8e-10 Score=123.45 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCch
Q 039943 455 MWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGR 534 (581)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~ 534 (581)
+...+.-++.|+..+...+..-++..+..|+...+...|++.+......++||.+.+.+.+.++ +
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg---------------~ 445 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG---------------S 445 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------C
Confidence 3344455678888899999999999999999999999999999999999999999999998764 2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 535 YDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 535 ~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
.+..+..+.++.++++++++.+..+
T Consensus 446 ~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 446 QRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred chhHHHHHHHHHHHHHHHHhhccch
Confidence 3556778888888888887555443
No 118
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=2.6e-12 Score=135.63 Aligned_cols=172 Identities=12% Similarity=0.066 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.++.+.+..++.....+++..++|.|+++++|++..+++++.+.+.++..++.++.|+++|| +|||+++.....+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHH
Confidence 34555555566666777888999999998999999999999999999999999999999999 79999998877666665
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
..+....+ +...+....++.|++.+...+...++..|..|. .+++..+.
T Consensus 285 ~~~~~~~~-----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~ 333 (394)
T PRK03699 285 MYLFVNTD-----------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV--------ASPKLVNF 333 (394)
T ss_pred HHHHHHcC-----------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CCHHHHHH
Confidence 55544443 344455566778888887888888887877654 24556777
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
.....++|..++|.+.|++.+..|++..+++.+++.+++.+...
T Consensus 334 ~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 334 ILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 78888999999999999999999999999887776666654433
No 119
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=2.8e-12 Score=135.51 Aligned_cols=166 Identities=14% Similarity=0.114 Sum_probs=134.2
Q ss_pred HHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhh
Q 039943 36 AFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTI 115 (581)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 115 (581)
.+..++++.+..+++.|+. +.|+ .+.++..+.+.++..++.++.|++.|| +||||.+..+.++..++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 226 ALASIGFGTIATFITLYYA-ARGW--DGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-Hccc--ccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3445556666778888876 4465 345667788888999999999999999 7999999988888888877776655
Q ss_pred cccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHH
Q 039943 116 LSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASS 195 (581)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (581)
+.+.++..+++.|++.+...+.......|.+|+ ++|++++++++...++|.
T Consensus 301 ----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 301 ----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP-------QNRGAALGAYSVFLDLSL 351 (399)
T ss_pred ----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHH
Confidence 556677788999999998888888888888887 679999999999999999
Q ss_pred HHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 039943 196 MVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPF 235 (581)
Q Consensus 196 ~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (581)
.++|.+.|++.+..||++.|++.+++.+++++......++
T Consensus 352 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 352 GITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999998999999999888777776655544443
No 120
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.43 E-value=6.4e-12 Score=131.31 Aligned_cols=164 Identities=9% Similarity=0.039 Sum_probs=130.6
Q ss_pred HHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhh
Q 039943 35 EAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTT 114 (581)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 114 (581)
.++..........++|.|+.+++|.+..+.+++.+...+...++.++.|+++|| +|||+++..+.++..+........+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHHH
Confidence 333333344455678889988999999999998888887888889999999999 7999999887766555554444444
Q ss_pred hcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhH
Q 039943 115 ILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLAS 194 (581)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (581)
+.+.++..+++.|++.+...+...++..|..|+ +++++.++++...++|
T Consensus 287 -----------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 287 -----------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG--------RAGAATTLYTNTGRVG 335 (375)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--------hhhHHHHHHHHHHHHH
Confidence 556677778888988888888888888888765 3568999999999999
Q ss_pred HHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 195 SMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 195 ~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
..++|.+.|++.+..||+..|++.++..+++.+...
T Consensus 336 ~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 336 WIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999999999999989999999988887776665543
No 121
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=4.9e-12 Score=135.52 Aligned_cols=181 Identities=14% Similarity=0.045 Sum_probs=132.0
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
++.........++..+.+|....+++.|+++.+|++......+..+..+...++.++.|+++|| +||||++..+.++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~ 327 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGT 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHH
Confidence 3333333445666777888899999999999999998876666667777788899999999999 799999998877665
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.+.+...... ..+...++...++.+++.+...+..+++++|.+|. +.|+++.
T Consensus 328 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~-------~~r~tg~ 381 (438)
T PRK09952 328 LSAFPFFMALEA-------------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA-------SYRYSGA 381 (438)
T ss_pred HHHHHHHHHHHc-------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc-------chhHHHH
Confidence 544333332100 01234444556667888888888889999999998 5698888
Q ss_pred HHHHHH-HhhHHHHHHHHHHhhhccc--cchhhhHHHHHHHHHHHHHHHhc
Q 039943 185 SWYYVS-VLASSMVAVTCIVYIQDNL--GWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 185 ~~~~~~-~~~g~~~~p~~~~~i~~~~--g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
++.+.. ..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+..
T Consensus 382 g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 382 GVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 886654 4589999999999998743 48888777777666666554443
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.43 E-value=2.8e-12 Score=133.58 Aligned_cols=169 Identities=11% Similarity=0.086 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
.+.+....++..+.......+.++|. +++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+.++.++..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHH
Confidence 34444444444455444556666665 5689999999999999999999999999999999 799999999988888887
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
++..+.++ .+...++...++.|++.+...+..++++.|.+|+ ++|++..++.
T Consensus 285 ~~~~~~~~---------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~g~~ 336 (377)
T TIGR00890 285 AAMLFIPM---------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP-------ANSAANYGFL 336 (377)
T ss_pred HHHHHccc---------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhh-------hhhhhHhHHH
Confidence 77666541 1223345566778888888888888999999988 6699999999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSA 226 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~ 226 (581)
+...++|..++|.+.|++.++.||++.|.+.+++.++++
T Consensus 337 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 337 YTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999999988877665543
No 123
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.42 E-value=5.1e-10 Score=114.19 Aligned_cols=376 Identities=14% Similarity=0.105 Sum_probs=217.5
Q ss_pred hhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccC-----ch-hhHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 039943 54 CGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVG-----RY-PMIGFGCITYLLGVVLLWLTTILSQAQPPACDQL 127 (581)
Q Consensus 54 ~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~G-----rr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (581)
..|++++..-.+.+.+.-.+... ..+..|+.+|+ .+ || +-+..|..+...+..+.+++..... +.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~-------~~ 77 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA-------ES 77 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc-------cc
Confidence 45788888888888877776655 57889999999 47 66 4555566677777777766653222 00
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 128 RSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
.-+...+.........+...+.|+|.+....+..++++|..|+ ++|+++.++.+...-+|.+++.++.+.+.+
T Consensus 78 ~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e-------~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 78 GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPE-------ERRPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCH-------hhhhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0001111222334566667888999999999999999999998 679999999999999999999999998888
Q ss_pred cccchhhhHHHHH----HHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhccccccCccccccccCCCCCcccc
Q 039943 208 NLGWKVGFGVPAV----ISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLSSQTTEEMYHPRKGSMLLV 283 (581)
Q Consensus 208 ~~g~~~~f~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (581)
.++..-..-+.-. ..++.++..+-..++.++..+..+
T Consensus 151 ~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~--------------------------------------- 191 (403)
T PF03209_consen 151 PFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAE--------------------------------------- 191 (403)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCC---------------------------------------
Confidence 7663333222222 222222221111111111110000
Q ss_pred CCcchhhhhhh-hhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhhcC-CChhheecccCCCC
Q 039943 284 PSENLRCLNKA-CIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTISQ-SSFPVLQASTMDRH 361 (581)
Q Consensus 284 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 361 (581)
.++..+.+.- +...+ .+.++++..+ ++... ..+.| .-+-.|-.. .
T Consensus 192 -~~~~~f~~a~~~~~~~-----------------------~~a~~f~~fl--~l~t~---a~~~QD~iLEPygg~----V 238 (403)
T PF03209_consen 192 -RPRPPFREAWRQVWAS-----------------------PQARRFFVFL--FLGTL---AFFMQDVILEPYGGE----V 238 (403)
T ss_pred -CCCccHHHHHHHHHhC-----------------------CChhHHHHHH--HHHHH---HHHhhHHHcCCchhH----H
Confidence 0000000000 00000 0122222211 11111 11223 111111111 1
Q ss_pred CCCCcccCc---ccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 039943 362 ITPNFEIPS---GSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAI 438 (581)
Q Consensus 362 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 438 (581)
+ .++. ..+........++...+..+ ...| | .++.+...+|..+.++++........
T Consensus 239 f----gmsv~eTT~Lta~~~~G~L~G~~~~g~----~l~~---~---~~~~~~a~~G~~~~~~~f~lii~a~~------- 297 (403)
T PF03209_consen 239 F----GMSVGETTRLTAFWGGGTLLGMLLAGF----LLSR---R---LGKKRTAALGCLLGALAFALIILAGP------- 297 (403)
T ss_pred c----CCCHHHHHHHHHHHHHHHHHHHHHHHH----HhcC---C---CCchHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 1 1222 22333344444444443332 2222 2 34445566676666666655444321
Q ss_pred ccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 039943 439 NEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITK 518 (581)
Q Consensus 439 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~ 518 (581)
.-+.+.+-...+++|++.++......+..++.++++..|..+|.+...+.++..++..+.+.+.|...
T Consensus 298 ------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 298 ------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred ------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12456667788999999999999999999999999999999999999999999999999999998764
Q ss_pred cCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 039943 519 RGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLAC 556 (581)
Q Consensus 519 ~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 556 (581)
++.++.....|..+|.+=+++.++++.+..-+
T Consensus 366 ------~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 366 ------ALFGNSPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred ------HhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22221133456777776666666666554433
No 124
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=2.4e-12 Score=130.47 Aligned_cols=179 Identities=18% Similarity=0.171 Sum_probs=147.1
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc-Cchhh-HHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCV-GRYPM-IGFGCITY 103 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~-Grr~~-~~~~~~~~ 103 (581)
|.+|.+.++.++-.+.-|++..|.|.|+.+..|+|..++++..+.|-.++..++++.||++||.+ |||.. -++++++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 45688889999999999999999999999999999999999999999999999999999999988 77643 44444455
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++.+...+++ ..+..+..+..+.+|+-.-+.+-..-....|..|+ +.-|++
T Consensus 332 ~~~~~~~w~~~---------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK-------~AaGtA 383 (448)
T COG2271 332 TASLVLYWLAP---------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPK-------KAAGTA 383 (448)
T ss_pred HHHHHHHHcCC---------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccH-------hhccch
Confidence 55666666655 22567777888888887777667777778898888 668999
Q ss_pred HHHHHHHHhh-HHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 184 FSWYYVSVLA-SSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 184 ~~~~~~~~~~-g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
.|+...+..+ |...+-...|++.|.+||...|++..+..+++.+.+...
T Consensus 384 ~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 384 TGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999888887 999999999999999999999998877776666555443
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=5.6e-12 Score=141.20 Aligned_cols=135 Identities=13% Similarity=0.024 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHH
Q 039943 66 NVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSA 145 (581)
Q Consensus 66 ~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (581)
+...+..++..++.+++|+++|| +|||++++++.++.+++.+++++.. +...+++.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~-----------------------s~~~ll~~ 654 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN-----------------------SESAMIAL 654 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc-----------------------cHHHHHHH
Confidence 33556668889999999999999 7999999999999999888888776 44556677
Q ss_pred HHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHH
Q 039943 146 LGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLS 225 (581)
Q Consensus 146 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~ 225 (581)
+++.++..++..+...++++|++|+ +.|++++++.+...++|+++||.+++++.+. +...+|++.+++.+++
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt-------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPS-------DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 7888888888889999999999999 7899999999999999999999999988764 4566777777776666
Q ss_pred HHHHHhc
Q 039943 226 ALSFFLA 232 (581)
Q Consensus 226 ~~~~~~~ 232 (581)
.++..+.
T Consensus 727 ~ll~~~L 733 (742)
T TIGR01299 727 GLLALKL 733 (742)
T ss_pred HHHHHhC
Confidence 5554443
No 126
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.41 E-value=8.5e-12 Score=128.34 Aligned_cols=170 Identities=21% Similarity=0.245 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchh-hHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYP-MIGFGCITYLLGV 107 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~-~~~~~~~~~~~~~ 107 (581)
+...+..++..........+.+.++.+.+|.+..+.+++.....++..++.++.|++.|| +|||+ .+..+.++..++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 256 (352)
T cd06174 178 LLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGL 256 (352)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHH
Confidence 334444555666666777888888888789999999999999999999999999999999 79999 9999999999988
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+...... +.+.++...++.|++.+...+...+++.|..|+ ++|++.++..
T Consensus 257 ~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 306 (352)
T cd06174 257 LLLALAP-----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPP-------EARGTASGLF 306 (352)
T ss_pred HHHHHhc-----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH-------HHHHHHHHHH
Confidence 8888776 567788899999999999999999999999998 6799999999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
+...++|..++|.+.+++.+..+|+..|++.++..+++.+..
T Consensus 307 ~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 307 NTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999998999999999888777766554
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.41 E-value=5.1e-12 Score=133.75 Aligned_cols=166 Identities=14% Similarity=0.060 Sum_probs=131.1
Q ss_pred HHHHHHHHhhhhhHHHHHhhhhcCCcch---hhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHH
Q 039943 35 EAFERMASMGLMPNMILYLCGEYNMETT---AGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLW 111 (581)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 111 (581)
.++..+....+.++++.|+.+..+.... ..+.+.++..++..++.+..|+++|| +|||+++..+.++..++.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHH
Confidence 3344445455667778888764443222 24556667778888999999999999 7999999998887777776666
Q ss_pred HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHH
Q 039943 112 LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSV 191 (581)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (581)
+.. +.+.+++.+++.|++.+...|...+++.+..|+ +.|++.++.++...
T Consensus 307 ~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~ 356 (408)
T PRK09874 307 FVQ-----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSN-------QIAGRIFSYNQSFR 356 (408)
T ss_pred Hhc-----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCc-------ccceeeehHHHHHH
Confidence 555 566777888999999999999999988887776 56899999999999
Q ss_pred hhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 192 LASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 192 ~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
++|..+||.++|++.+..||++.|++.+++.+++.+....
T Consensus 357 ~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 357 DIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988887777665544
No 128
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.41 E-value=2e-11 Score=128.95 Aligned_cols=176 Identities=11% Similarity=0.038 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
..+.+.+..++....++++..++|.|+++ +|++..+++...+.+.++..++.++.|+++|| +|||+.+..+..+..++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVG 283 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHH
Confidence 34555555566677888899999999975 89999999999999999999999999999999 79999999888777776
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
..+....+. +...+ ...+.|++.+...|.......+.++++ +.|++.+++
T Consensus 284 ~~~~~~~~~----------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~------~~~g~~~g~ 333 (393)
T PRK09705 284 FCGFIWLPL----------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQP------AIAGKLVAF 333 (393)
T ss_pred HHHHHHccc----------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCH------HHHHHHHHH
Confidence 655443220 11112 124568888888888777777777532 468999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHHHHhcCC
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALSFFLASP 234 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~~~~~~~ 234 (581)
.+...+++..++|++.|++.|..| |...|++.++..++++.......+
T Consensus 334 ~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 334 MQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999875 788888877766666555444333
No 129
>PRK12382 putative transporter; Provisional
Probab=99.38 E-value=1.3e-11 Score=130.23 Aligned_cols=162 Identities=14% Similarity=0.134 Sum_probs=132.5
Q ss_pred HHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhh
Q 039943 36 AFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTI 115 (581)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 115 (581)
++....+..+..+.+.|+++ .+++ +.+.....+.++..++.++.|++.|| +||||.+..+..+..++.++..+.+
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcc-
Confidence 33445555666777888864 4654 35666777888888999999999999 7999999999888888877776655
Q ss_pred cccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHH
Q 039943 116 LSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASS 195 (581)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (581)
+...++...++.|++.+...+...+...|.+|+ ++|++..++++....+|.
T Consensus 301 ----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 301 ----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS-------QVRGTALGGYAAFQDIAY 351 (392)
T ss_pred ----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHH
Confidence 556667788899999998888888888998887 679999999999999999
Q ss_pred HHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 196 MVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 196 ~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.++|.+.|++.++.||+..|.+.+++.+++.+..+.
T Consensus 352 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 352 GVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988877776665543
No 130
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.38 E-value=1.4e-11 Score=131.20 Aligned_cols=175 Identities=9% Similarity=0.013 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhhcCCc--------chhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 31 IIANEAFERMASMGLMPNMILYLCGEYNME--------TTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s--------~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
.++..++..........+.+.|+. +.|.+ ..+.+.+.++..+...++.++.|+++|| +|||+++..+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~ 290 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVA 290 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 333344444433344466777875 34544 3667899999999999999999999999 7999999999998
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
..++..++..... +..+...+++.+++.|++.+...+....++.|.+|+ +.|++
T Consensus 291 ~~v~~~l~~~~~~-------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~-------~~~g~ 344 (418)
T TIGR00889 291 WALRFGFFAYGDP-------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV-------HIRAS 344 (418)
T ss_pred HHHHHHHHHHcCc-------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHH
Confidence 8887766666320 011345677889999999999889999999999998 77999
Q ss_pred HHHHHH-HHHhhHHHHHHHHHHhhhcc------ccchhhhHHHHHHHHHHHHHHHhcC
Q 039943 183 YFSWYY-VSVLASSMVAVTCIVYIQDN------LGWKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 183 ~~~~~~-~~~~~g~~~~p~~~~~i~~~------~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
++++.+ ....+|..+||+++|++.++ +||+.+|.+.+++.+++.+.+....
T Consensus 345 ~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 345 AQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999997 56789999999999999887 4699999988877666655544433
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=99.37 E-value=3.9e-11 Score=126.51 Aligned_cols=172 Identities=10% Similarity=-0.081 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
+...+..++.....++...++++|+.+.+|++..+++++.+.+.++..++.++.|+++|| +|||+++. +..+..++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~-~~~~~~~~~~ 285 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFLLI-AIALLLVCLL 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHH-HHHHHHHHHH
Confidence 333444445555556666788889988899999999999999999999999999999999 69887544 4444444333
Q ss_pred HH-HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 109 LL-WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 109 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+. ...+ +...+++..++.|++.+...+...+.+.+..|+ .|+++.+++
T Consensus 286 ~l~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~ 334 (390)
T PRK03545 286 LLLPAAN-----------------------SEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD--------ATDVAMALF 334 (390)
T ss_pred HHHHHhc-----------------------hHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC--------cHHHHHHHH
Confidence 32 3333 556677788888998887777777887776553 478999999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcC
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
+....+|..+||.++|++.+++|++..|++.+++.+++++......
T Consensus 335 ~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 335 SGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 9889999999999999999999999999998888877776655433
No 132
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.37 E-value=3.4e-12 Score=133.71 Aligned_cols=168 Identities=15% Similarity=0.061 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.++...+..++....++.+..++|.|+++++|.+..+.+.+.....++..++.++.|+++|| +|||+.+..+..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHH
Confidence 35555666667777788888999999988999999999999999999999999999999999 79999887655444332
Q ss_pred H-HHH-HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 107 V-VLL-WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 107 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
. .+. .+.. ..+...++...++.|++.+...+...+++.|.+|+ +.|+++.
T Consensus 299 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~~~~~ 350 (394)
T TIGR00883 299 AVPLLMALLD---------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPT-------EVRYTGA 350 (394)
T ss_pred HHHHHHHHhc---------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCc-------cceeeEe
Confidence 2 222 2221 11455666777888888888889999999999998 5588888
Q ss_pred HHHH-HHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHH
Q 039943 185 SWYY-VSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISL 223 (581)
Q Consensus 185 ~~~~-~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~ 223 (581)
++.+ ....+|..++|.++|++.++.| |++.++..++..+
T Consensus 351 ~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 351 SLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred eehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 8754 4556889999999999999888 8877666555433
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=2.1e-11 Score=129.82 Aligned_cols=160 Identities=9% Similarity=-0.002 Sum_probs=133.4
Q ss_pred HhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q 039943 42 SMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQP 121 (581)
Q Consensus 42 ~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (581)
..++..++|.|+++.+|.+..+.+++.+...++..++.++.|++.|| .++++++..+.++..++.++..+.+
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHccc-------
Confidence 35566788999988799999999999999999999999999999999 5888888888888777777766655
Q ss_pred CcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 122 PACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
+.....+..++.|++.+...+...+++.|..|+ +.|++++++++...++|..+||.+
T Consensus 311 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~g~~l 367 (417)
T PRK10489 311 ----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD-------EMLGRINGLWTAQNVTGDAIGAAL 367 (417)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-------HHHHHHHHHHHHHHhhhHhHHHHH
Confidence 555667778888988888778888899999988 779999999999999999999999
Q ss_pred HHhhhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 202 IVYIQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 202 ~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
.|++.+..|++..+.+.+.+.++..++....
T Consensus 368 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 368 LGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 9999999999888887776655544444443
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.36 E-value=2.9e-11 Score=131.63 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=116.6
Q ss_pred hhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 039943 44 GLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPA 123 (581)
Q Consensus 44 ~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (581)
....++|.|+++++|++..+++++.+...++..++.+++|+++|| +|||+++..+.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 456789999988999999999999999999999999999999999 7999999888766665544433322
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 124 CDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
+.+.+.+.+..++.+....+..+..++++.|.+|+ ++|++.+++++...++|..+||.+.|
T Consensus 363 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 363 ------------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT-------EQRAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred ------------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH-------HHhhcccchhhhhhhHHHHHHHHHHH
Confidence 11333344444444433334456777888999988 67999999999999999999999999
Q ss_pred hhhccccchhhhHHHHHH
Q 039943 204 YIQDNLGWKVGFGVPAVI 221 (581)
Q Consensus 204 ~i~~~~g~~~~f~~~~~~ 221 (581)
++.+.+||+..+.+.+..
T Consensus 424 ~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 424 LIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHhccCChHHHHHHHHHH
Confidence 999999998887655443
No 135
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.36 E-value=4.4e-12 Score=112.10 Aligned_cols=133 Identities=16% Similarity=0.227 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHH
Q 039943 68 LLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALG 147 (581)
Q Consensus 68 ~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (581)
.+.+.++..++.++.|+++|| +|||+.+..+..+..++.+.+.... +.+.++..++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 59 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSS-----------------------NITVLIIARF 59 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhc-----------------------cHHHHHHHHH
Confidence 345667888899999999999 7999999999988888888777766 6777888999
Q ss_pred HHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHH
Q 039943 148 LMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 148 l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~ 227 (581)
+.|++.+...+...+++.|.+|+ ++|++..+..+....+|..++|.+.+++.+..+|++.|++.++..++..+
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPP-------EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCCh-------hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 66999999999999999999999999999888999999888776666554
Q ss_pred HHHh
Q 039943 228 SFFL 231 (581)
Q Consensus 228 ~~~~ 231 (581)
....
T Consensus 133 ~~~~ 136 (141)
T TIGR00880 133 LLAF 136 (141)
T ss_pred HHhh
Confidence 4443
No 136
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.35 E-value=2.5e-11 Score=129.90 Aligned_cols=175 Identities=11% Similarity=0.043 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccC--chhhH-HHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVG--RYPMI-GFGCITYL 104 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~G--rr~~~-~~~~~~~~ 104 (581)
++.+.+..++....++++..++|.|+.+++|++..++++..+.+.+++.++.++.|+++|| ++ +|+.. ....+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHHH
Confidence 4555555556666677788899999988899999999999999999999999999999999 62 33332 22222222
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
+....+..... . +.....+..++.|++............+|.+|+ +.|+++.
T Consensus 324 ~~~~~~~~~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 375 (434)
T PRK11663 324 LSVGSLWLMPF--------------------A-SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK-------EAAGAAT 375 (434)
T ss_pred HHHHHHHHccc--------------------c-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH-------hhHHhHH
Confidence 22222111110 0 222233333444443332223334566888877 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
++.+...++|..++|.+.|++.++.||+..|++.+++.+++.+....
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877766554443
No 137
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.35 E-value=6.8e-12 Score=119.72 Aligned_cols=134 Identities=16% Similarity=0.183 Sum_probs=112.9
Q ss_pred HHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccc
Q 039943 49 MILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLR 128 (581)
Q Consensus 49 l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (581)
+..+...+.+++.++..++++++..-..+.++++|++.||.+|-|..-++-++...+|.+..+...+
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi------------- 132 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI------------- 132 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-------------
Confidence 5566777778888888999999999999999999999999889887777666677777777766541
Q ss_pred cccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc
Q 039943 129 SDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDN 208 (581)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~ 208 (581)
..++|.+.++|+++|+|.-....+..++...+|.. ++..-++++......+|+.+-..+.+++.+.
T Consensus 133 -------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKG-------KELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 133 -------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKG-------KELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred -------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecC-------ccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 22789999999999999988888889999999988 6699999999999999999888888888765
Q ss_pred c
Q 039943 209 L 209 (581)
Q Consensus 209 ~ 209 (581)
.
T Consensus 199 ~ 199 (459)
T KOG4686|consen 199 M 199 (459)
T ss_pred H
Confidence 3
No 138
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.34 E-value=3.3e-11 Score=127.63 Aligned_cols=167 Identities=11% Similarity=-0.066 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHH
Q 039943 32 IANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLW 111 (581)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 111 (581)
....++....++.+..++|.|+. +.|++..+.+.+.+.+.++..++.++.|+++|| +|||+.+..+.+...++.+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 226 WISYFFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALA 303 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566677788888886 479999999999999999999999999999999 7999999887766666665555
Q ss_pred HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHH
Q 039943 112 LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSV 191 (581)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (581)
+.+ +.+.+++..++.|++.++..+...++..|.+|+ +.|++..++.+...
T Consensus 304 ~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~ 353 (406)
T PRK11551 304 AAP-----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPT-------QVRGTGVGAAVAVG 353 (406)
T ss_pred hcC-----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcch-------hhhhhhhhHHHHhh
Confidence 544 445566667778888878888899999999998 66999999999999
Q ss_pred hhHHHHHHHHHHhhhccc-cchhhhHHHHHHHHHHHHHHH
Q 039943 192 LASSMVAVTCIVYIQDNL-GWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 192 ~~g~~~~p~~~~~i~~~~-g~~~~f~~~~~~~~i~~~~~~ 230 (581)
.+|..++|.+.|++.++. +|...+++.+...+++.+..+
T Consensus 354 ~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 354 RLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998864 455556555555555444433
No 139
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.33 E-value=1.4e-11 Score=131.21 Aligned_cols=158 Identities=8% Similarity=-0.009 Sum_probs=126.9
Q ss_pred HhhhhhHHHHHhhhh---cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039943 42 SMGLMPNMILYLCGE---YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQ 118 (581)
Q Consensus 42 ~~~~~~~l~~yl~~~---~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (581)
+......++.|+.+. .+.+..+.+.+.++..++..++.++.|+++|| +|||+.+..+.++..++..+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~~~---- 313 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGFAT---- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHhcc----
Confidence 333444566676543 35667788999999999999999999999999 7999999999998888888887766
Q ss_pred CCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH-HHHHHhhHHHH
Q 039943 119 AQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW-YYVSVLASSMV 197 (581)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~ 197 (581)
+.+.+++.+++.|++.+...+....++.|.+|+ +.|++.++. ++....+|.++
T Consensus 314 -------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~a~~~~~~~~~~~~lg~~i 367 (420)
T PRK09528 314 -------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDV-------RLSATIYLVGFQFAKQLGAVF 367 (420)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-------cceeeeeeehHHHHHHHHHHH
Confidence 567778889999998888878888899999987 457766654 56677899999
Q ss_pred HHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 198 AVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 198 ~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+|.+.|++.+..||+..|.+.+++.++..+..+
T Consensus 368 g~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 368 LSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987776655544433
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.33 E-value=4e-11 Score=125.38 Aligned_cols=176 Identities=15% Similarity=0.044 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhH-HHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMI-GFGCITYLL 105 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~-~~~~~~~~~ 105 (581)
.++...+..++.......+..+++.|+++.+|.+..+.+++.+...++..++.+++|+++|| +|||+.. ........+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 294 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAII 294 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHHH
Confidence 45556666777777788888899999999999999999999999999999999999999999 6999611 111111111
Q ss_pred HH---HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 106 GV---VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 106 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
+. .+..+..+. ..+.........+.+.+.+ ..+...+++.|.+|+ +.|++
T Consensus 295 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~g~ 347 (399)
T TIGR00893 295 AGLVLSLLMFATNY-------------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPG-------NIAGL 347 (399)
T ss_pred HHHHHHHHHHHhcc-------------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh-------hHHHH
Confidence 11 111111100 0122333333333344444 788999999999998 67999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~~~ 230 (581)
..++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..+
T Consensus 348 ~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 348 TGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888 99999888777666655443
No 141
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.32 E-value=3.9e-11 Score=129.11 Aligned_cols=175 Identities=17% Similarity=0.157 Sum_probs=122.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc--CchhhHH-HHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCV--GRYPMIG-FGCITY 103 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~--Grr~~~~-~~~~~~ 103 (581)
.++...+..++.....+++..++|.|+++++|++..+++++...+.++..++.+++|+++|| + |||+... ....+.
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLV 332 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHH
Confidence 35556666666677778888999999998899999999999999999999999999999999 7 4454332 222233
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++.+++.+.. ..+....+...++.|.+.........++..|.+|+ +.|+++
T Consensus 333 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~ 384 (452)
T PRK11273 333 TIATIVYWLNP---------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK-------KAAGTA 384 (452)
T ss_pred HHHHHHHHHhc---------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh-------hhhhhH
Confidence 33333332221 00223333444555544333223344566788988 679999
Q ss_pred HHHHHHHHhhHHHH-HHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 184 FSWYYVSVLASSMV-AVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 184 ~~~~~~~~~~g~~~-~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
.++.+...++|+.+ +|.+.|++.+..||+..|++.+...+++++...
T Consensus 385 ~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 385 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99999888887654 799999999999999999888776666655443
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=8.5e-11 Score=123.62 Aligned_cols=169 Identities=11% Similarity=0.008 Sum_probs=143.3
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.++...+..++.....+...++.++|++ ++|.+..+.+.+.++..++..+..++.|++.|| +|+|+++.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHH
Confidence 34555666667777777788889999996 589999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
...+.++++ +.+.++...++.|+..|...+....++.+. |+ +.|+++.+
T Consensus 283 ~~~~~~~~~-----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~-------~~~~~~q~ 331 (382)
T TIGR00902 283 RWAIIGAIE-----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG-------SEIAKLQA 331 (382)
T ss_pred HHHHHHhHh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH-------hhHHHHHH
Confidence 998888877 778888999999999999999999999987 76 55888888
Q ss_pred HHH-HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 186 WYY-VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 186 ~~~-~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
+++ ....+|..++|.++|++.|++|+ ..|.+.+++.+++++.
T Consensus 332 ~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 332 LYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 876 46679999999999999999986 5677666666655443
No 143
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=4.1e-11 Score=126.30 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH-HHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV-LLW 111 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~-~~~ 111 (581)
....+......+...++|.|+.+++|++..+.+++.+...++..++.++.|+++|| +|||+.+..+.++..+... +..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~ 323 (405)
T TIGR00891 245 VLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFA 323 (405)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHH
Confidence 33344455555677788999998999999999999999999999999999999999 7999999888766533322 222
Q ss_pred HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHH
Q 039943 112 LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSV 191 (581)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (581)
... +.+.+.+..++.++..++..+..++++.|.+|+ ++|++.+++.+...
T Consensus 324 ~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~ 373 (405)
T TIGR00891 324 IGA-----------------------NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT-------DQRAAGLGFTYQLG 373 (405)
T ss_pred hCC-----------------------chHHHHHHHHHHHHHHccchhhHHHHHhhhCCc-------chhHHHhhHHHHHH
Confidence 222 445555666777777777778888999999988 66999999999999
Q ss_pred hhHHHHHHHHHHhhhcccc-chhhhHH
Q 039943 192 LASSMVAVTCIVYIQDNLG-WKVGFGV 217 (581)
Q Consensus 192 ~~g~~~~p~~~~~i~~~~g-~~~~f~~ 217 (581)
++|..++|++.|++.+..| |+..+..
T Consensus 374 ~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 374 NLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999888 8766544
No 144
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.30 E-value=5.1e-11 Score=128.29 Aligned_cols=172 Identities=10% Similarity=0.025 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc-cCchhhHHHHH--HHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC-VGRYPMIGFGC--ITY 103 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~-~Grr~~~~~~~--~~~ 103 (581)
.++...+..++..++++....+++.|++ ++|++..+++++.++..++..++.+++|+++||. +++|+...++. ++.
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 3455556666677777888889999986 5799999999999999999999999999999972 23343333333 333
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++.+++.+.. +.+.+++.+++.|++.+...+...+++.|.+|+ +++++.
T Consensus 321 ~l~~ll~~~~~-----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~-------~~~g~~ 370 (455)
T TIGR00892 321 GLTHLLCALAG-----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA-------QRFSSA 370 (455)
T ss_pred HHHHHHHHHhc-----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH-------HHHhhH
Confidence 33444444444 567778889999999999999999999999987 679999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhccc-cchhhhHHHHHHHHHHHHHH
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNL-GWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~-g~~~~f~~~~~~~~i~~~~~ 229 (581)
+++++...++|..+||.++|++.+.. +|++.|++.+++.+++.+..
T Consensus 371 ~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 371 VGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 99999999999999999999998877 59999999888766665543
No 145
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=1.1e-10 Score=122.57 Aligned_cols=158 Identities=18% Similarity=0.171 Sum_probs=123.7
Q ss_pred HHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhc
Q 039943 37 FERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTIL 116 (581)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 116 (581)
+....+.....++|.|+++ .|.+.++.+++.+...++..++.++.|+++|| +|||+++..+.++..++..... ..
T Consensus 211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~-~~-- 285 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML-SQ-- 285 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh-hh--
Confidence 3334444455678888864 69999999999999999999999999999999 6999999888877777654432 11
Q ss_pred ccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHH
Q 039943 117 SQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSM 196 (581)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 196 (581)
...+..+.+.|++.+...|...+.+.|..|+ ++++...+.++...++|..
T Consensus 286 -----------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 286 -----------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEH-------HELVAMNQALLLSYTVGSL 335 (381)
T ss_pred -----------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCH-------HHHHHHHHHHHHHHHHHHH
Confidence 1223456677777777789999988998877 4577778888888899999
Q ss_pred HHHHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 197 VAVTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 197 ~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
+||.++|++.|+.||++.|.+.+.+.+++.+..
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998877776555443
No 146
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=7.2e-10 Score=113.34 Aligned_cols=134 Identities=9% Similarity=0.042 Sum_probs=101.1
Q ss_pred HHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccc
Q 039943 49 MILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLR 128 (581)
Q Consensus 49 l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (581)
...|.++.+| +...+.|...+|.+.+....+++-|+.|| +|-|...+++..+..+|..+=..+.+ +.+.
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir~iss~-p~v~-------- 135 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIRLISSL-PFVP-------- 135 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhccC-cccc--------
Confidence 3346666677 77788899999999999999999999999 79999999999999999988877762 2111
Q ss_pred cccccccchhHH--HHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 129 SDCESATWSQLM--LLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 129 ~~~~~~~~~~~~--~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
..++ ....+-.+.+.+.-.....-+...+-+|++ ++|..+..+-.++..+|.++|.++...+.
T Consensus 136 --------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~-------~qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 136 --------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPP-------DQRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred --------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCc-------chhhhhhhHHHhcchHHHHHHhhccceec
Confidence 1334 556666667666665555555666667887 56899888877777788888877766665
Q ss_pred cc
Q 039943 207 DN 208 (581)
Q Consensus 207 ~~ 208 (581)
.+
T Consensus 201 ~~ 202 (480)
T KOG2563|consen 201 PS 202 (480)
T ss_pred CC
Confidence 43
No 147
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.7e-10 Score=118.36 Aligned_cols=176 Identities=17% Similarity=0.052 Sum_probs=146.3
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+.++...+..++...+.|...+|+-+++++..|++.+..+++..+|.++..++..++|+++|| +.|+++.....+.++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 356777788888888889999999999999999999999999999999999999999999999 788888888788777
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
....+.+..+ +.+...+..++.|++..........-.++..| +.+..+.+
T Consensus 289 ~~l~l~~~~~----------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p--------~~~~~a~s 338 (394)
T COG2814 289 ALLALTFTGA----------------------SPALALALLFLWGFAFSPALQGLQTRLARLAP--------DAADLAGS 338 (394)
T ss_pred HHHHHHHhcc----------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC--------CchHHHHH
Confidence 7777666651 45566666777888777666556666565333 35888999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcC
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
++....|+|..+|..++|.+.+++|+....++.++..+++++..+...
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888877665543
No 148
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=2.4e-10 Score=122.53 Aligned_cols=183 Identities=18% Similarity=0.163 Sum_probs=150.0
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCch--hhHHHHHH
Q 039943 24 GLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRY--PMIGFGCI 101 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr--~~~~~~~~ 101 (581)
+.|.+...++..++.+-+..++......|.++++|++..+...+..+.++...+|+++.|++.|| +|.| ++++++++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHH
Confidence 34566777777888888888899999999999999999999999999999999999999999999 7999 89988887
Q ss_pred HHHHHHHHHHH--hhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchh
Q 039943 102 TYLLGVVLLWL--TTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGA 179 (581)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (581)
+..+..+.-.+ ..+.. ...+.+.+++.-++.|+..|+.++..-++.+|+.|+ ++
T Consensus 358 ~~~~i~~~g~~G~~~~~~-----------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~-------g~ 413 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFF-----------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP-------GR 413 (477)
T ss_pred HHHHHHHHHHHHhhhccc-----------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC-------ch
Confidence 77443333222 22100 011556688888899999999999999999999999 56
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHHHHh
Q 039943 180 LQSYFSWYYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+..+|++.......+.+||.+.|.+.+..| .|+.+....+..+++++++..
T Consensus 414 e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 414 EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999998876 888887777777777666544
No 149
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.26 E-value=2.5e-10 Score=120.87 Aligned_cols=174 Identities=11% Similarity=0.029 Sum_probs=128.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHH-HHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIG-FGCITYLL 105 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~-~~~~~~~~ 105 (581)
.++...+..++....+++...+.|.|++ ++|++..+.+++.+...++..++.++.|+++|| +|||+.+. .+.+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGI 300 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHH
Confidence 3455556667777888888999998885 589999999999999999999999999999999 79988764 23333333
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+.+...... ...+.+..++..++.|++.+...+. .+...|..| ++|+++++
T Consensus 301 ~~~~l~~~~~~------------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~--------~~~g~~~g 353 (402)
T TIGR00897 301 FTLALYYIPQH------------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP--------KHKGAAMS 353 (402)
T ss_pred HHHHHHHHHHc------------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc--------chhHHHHH
Confidence 33333322200 0113455566777888887776553 455566543 35999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
+.+...++|..++|.+.|++.+..||...|++.+++.+++.+..
T Consensus 354 ~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 354 VLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887776655443
No 150
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.25 E-value=2.6e-10 Score=123.88 Aligned_cols=177 Identities=13% Similarity=0.073 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHH-HHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLL-IWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~-~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+.+.+..++.....+....+.++|+.+++|++.++.+++.. ...++..++.+++|+++|| +|||+.+.++.++.+++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHH
Confidence 33444445555666666678888988889999999999875 5567899999999999999 799998877666555544
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+........ ..+...+....++..+..|...+...++..+..++ +.+++.+++.
T Consensus 304 l~~~~l~~~-------------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~-------~~~~t~~gl~ 357 (491)
T PRK11010 304 AGYWLLSIT-------------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNK-------SFSATQFALL 357 (491)
T ss_pred HHHHHHHhc-------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCcHHHHHHH
Confidence 333221100 01333444455555555555556677888888887 5578889999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
+...++|..+++.+.|++.+..||+..|.+.+++.+++++.....
T Consensus 358 ~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 358 SALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888899999999999999998888887776665544
No 151
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.25 E-value=1.5e-10 Score=121.40 Aligned_cols=185 Identities=12% Similarity=0.084 Sum_probs=137.7
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhh-hcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCc-hhhHH
Q 039943 20 NPKGGLRTLPFIIANEAFERMASMGLMPNMILYLCG-EYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGR-YPMIG 97 (581)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Gr-r~~~~ 97 (581)
..+.+||.+++..+..++..+.+....+-+-+|+++ +.+-+.+-.|+++++..++.+++.+..|+...| -|+ |+-++
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli 106 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLI 106 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHH
Confidence 346789999999999999999988888888889975 477788889999999999999999999999999 574 66667
Q ss_pred HHHHHHHHHHHHH-HHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCccc
Q 039943 98 FGCITYLLGVVLL-WLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKS 176 (581)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 176 (581)
.|.++.++|.++. ++.. .+ +...+.++++|++.|+|.|.. ...-+++++....+
T Consensus 107 ~s~ii~~~g~llY~~l~~-~~------------------~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~----- 161 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAY-VP------------------NGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVE----- 161 (488)
T ss_pred HHHHHHHHHHHHHHHHHh-cc------------------cchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCcc-----
Confidence 7888999988888 4443 11 125788999999999997764 56778888866553
Q ss_pred chhhhHHHHHHHHHHhhHHHHHHHHHHhhh----ccc---------cchhhhHHHHHHHHHHHHHHHhc
Q 039943 177 KGALQSYFSWYYVSVLASSMVAVTCIVYIQ----DNL---------GWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 177 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~----~~~---------g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
.|.++++....+..+|..+||.+...+. +.+ -|..+-|+.+++.++..+...+.
T Consensus 162 --dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~ 228 (488)
T KOG2325|consen 162 --DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFF 228 (488)
T ss_pred --chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhh
Confidence 4788888777777777777776654432 111 14445566666655555544443
No 152
>PRK15075 citrate-proton symporter; Provisional
Probab=99.25 E-value=1.8e-10 Score=123.37 Aligned_cols=152 Identities=13% Similarity=0.022 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH-HHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV-LLW 111 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~-~~~ 111 (581)
+..++....++++..++|.|+++.+|++..+.+++..++.++..++.+++|+++|| +|||+++..+.++..+... ...
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHH
Confidence 33444566677888999999998899999999999999999999999999999999 7999998876554433221 111
Q ss_pred HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHH
Q 039943 112 LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSV 191 (581)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (581)
.... ..+.........+.+++.+...+....++.|.+|+ +.|+++.++.+...
T Consensus 324 ~~~~--------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~-------~~rg~~~g~~~~~~ 376 (434)
T PRK15075 324 WLVA--------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPA-------EVRTAGFSLAYSLA 376 (434)
T ss_pred HHHc--------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCC-------CccchheeHHHHHH
Confidence 1110 01222333444555666666667777889999998 66899998865544
Q ss_pred h-hHHHHHHHHHHhhhccccch
Q 039943 192 L-ASSMVAVTCIVYIQDNLGWK 212 (581)
Q Consensus 192 ~-~g~~~~p~~~~~i~~~~g~~ 212 (581)
+ +++.++|.+.|++.+..|+.
T Consensus 377 ~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 377 TAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHhhhHHHHHHHHHHhcCCc
Confidence 4 46788999999999988864
No 153
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.24 E-value=1.3e-10 Score=118.02 Aligned_cols=183 Identities=10% Similarity=0.022 Sum_probs=144.7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
.+..|.+.+..+...-++-++..++|.|+++++++++.+++.+...+.+...+..+.+|+|+|| +|.+|+.++....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHH
Confidence 3456777777777777788899999999999999999999999999999999999999999999 799999999998888
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++..+..+..+... ...+...++...+..++..|.-......++...+|+ +-+.+.
T Consensus 296 ~~~~~l~~~~~~~~----------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~--------~~G~v~ 351 (417)
T COG2223 296 LAAALLSLFLTGFG----------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK--------ETGAVT 351 (417)
T ss_pred HHHHHHHccccccc----------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh--------hhhHHH
Confidence 88877777641110 012444455545555555555556677788888875 478889
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHHHHhc
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
++.....++|+..-|...+...+..| +...|++...+.+++....+..
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888877 8888988887777776655443
No 154
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.23 E-value=1.3e-09 Score=116.24 Aligned_cols=159 Identities=16% Similarity=0.098 Sum_probs=119.5
Q ss_pred HHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc--c--CchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 49 MILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC--V--GRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 49 l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~--~--Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
..+|+++++|+++.+...+.+...+-..+ .++.|.++|.+ + .||+-++++.++..++...+++.+..
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~-------- 82 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS-------- 82 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc--------
Confidence 44678899999999998877777665554 57889999994 2 35556666666665556655554411
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
..+.....+..++..+|.........+++.|...++. +.|+...+..+....+|+.++..++|.
T Consensus 83 -----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p-----~~~g~lqS~~~~~~~~G~lv~~~l~G~ 146 (433)
T PF03092_consen 83 -----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREP-----ESRGDLQSFVWGVRSVGSLVGSLLSGP 146 (433)
T ss_pred -----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC-----chhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 1144455566777888888999999999999987665 348888999999999999999999999
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 205 IQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 205 i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
+.+..++++.|.+.++..++..+..+..
T Consensus 147 l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 147 LLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred hhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 9999999999998877666555444433
No 155
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=3.1e-10 Score=122.04 Aligned_cols=166 Identities=13% Similarity=0.073 Sum_probs=119.5
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
+..+.+ ++.+++|++..+.++......++..++.+++|+++|| +|||+.+.+++++.+++.+++.+......
T Consensus 303 ~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 374 (481)
T TIGR00879 303 IMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFV------ 374 (481)
T ss_pred hHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhccc------
Confidence 334444 4456789999989999999999999999999999999 79999999998888887777663220000
Q ss_pred cccccccccc-cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 125 DQLRSDCESA-TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 125 ~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
... ...+...+....+..+....+..+...+++.|.+|+ +.|+++.++.+...++|.+++|.+.+
T Consensus 375 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~~~~~~~~~lg~~i~~~~~~ 440 (481)
T TIGR00879 375 -------TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPL-------SLRPKGISIAVAANWLANFIVGFLFP 440 (481)
T ss_pred -------CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCCh-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000122222222222222233446677788999998 67999999999999999999999999
Q ss_pred hhhccccchhhhHHHHHHHHHHHHHHHhc
Q 039943 204 YIQDNLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 204 ~i~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
++.++.+|++.|++.+++.+++.+...+.
T Consensus 441 ~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 441 TMLESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHhcCccceehhHHHHHHHHHHHHhee
Confidence 99998899999998887777666655443
No 156
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=4.5e-10 Score=120.19 Aligned_cols=167 Identities=13% Similarity=-0.040 Sum_probs=110.3
Q ss_pred HHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHH-hhh
Q 039943 37 FERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWL-TTI 115 (581)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~-~~~ 115 (581)
+....+|++..++|.|+.+.+|++..+.+...++..++..++.++.|+++|| +|||+++.++.++..+....... ..+
T Consensus 254 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
T PRK10406 254 AGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSALQN 332 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3467788899999999998899999999998888888888999999999999 79999887766544333221211 110
Q ss_pred cccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhh-H
Q 039943 116 LSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLA-S 194 (581)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g 194 (581)
..+....+....+..+..+...+...++.+|.+|+ +.|++++++.+...++ +
T Consensus 333 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~-------~~r~t~~g~~~~~g~~~~ 385 (432)
T PRK10406 333 --------------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPA-------QVRALGVGLSYAVANALF 385 (432)
T ss_pred --------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CccchhhhHHHHHHHHHH
Confidence 00122212222222233333445577888999998 6799999998876553 3
Q ss_pred HHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 195 SMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 195 ~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+..+|.+.+++.....|...+++.++..+++++..++
T Consensus 386 g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 386 GGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5557877776643323555666555555555544433
No 157
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.21 E-value=2.1e-09 Score=109.49 Aligned_cols=368 Identities=15% Similarity=0.092 Sum_probs=198.5
Q ss_pred hhhHHHHHhhhhcCC---cc----hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHH-HHHHHHHHHHHHHHHhhhc
Q 039943 45 LMPNMILYLCGEYNM---ET----TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIG-FGCITYLLGVVLLWLTTIL 116 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~---s~----~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~-~~~~~~~~~~~~~~~~~~~ 116 (581)
...+.|+|+++..+- +. +-.+...++..+..++..|+-|.++|+ .|+||-.+ ....+.++.+..+++.+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i~-- 110 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFIP-- 110 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHhC--
Confidence 446678888876554 33 334666788888999999999999999 58665554 44455566677777766
Q ss_pred ccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHH
Q 039943 117 SQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSM 196 (581)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 196 (581)
+..+++...+..++..++.........+++.+..++++ .++..++-+....+|+.
T Consensus 111 ------------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~-------~~riS~lg~~~gylgs~ 165 (438)
T COG2270 111 ------------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN-------MGRISGLGWALGYLGSV 165 (438)
T ss_pred ------------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc-------cCcccccccccccccch
Confidence 12356677777888889999988999999999888744 33333443444456666
Q ss_pred HHHHHHHh--h-h---------------ccccchhhhHHHHHHHHHHHHHHHhcCCcccccC-CCCChhhhHHHHHHHHH
Q 039943 197 VAVTCIVY--I-Q---------------DNLGWKVGFGVPAVISLLSALSFFLASPFYVQSK-ANTSLLTGLIQVLVASY 257 (581)
Q Consensus 197 ~~p~~~~~--i-~---------------~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 257 (581)
+.-+++-. + . +...-|..+.+.++..++..+-+++..+..++.+ |.......-.+.+...+
T Consensus 166 i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~ 245 (438)
T COG2270 166 ILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTF 245 (438)
T ss_pred HHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHH
Confidence 55544311 1 1 1223455666666554444444444333222111 11111111111111111
Q ss_pred hhccccccCccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHh
Q 039943 258 KNRHIKLSSQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWST 337 (581)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (581)
++-+ .++. ...+++.
T Consensus 246 k~i~--------------------------------------------------------------~~~~---i~~FLiA 260 (438)
T COG2270 246 KEIR--------------------------------------------------------------GRKN---LVLFLIA 260 (438)
T ss_pred HHHh--------------------------------------------------------------cccc---hHHHHHH
Confidence 1110 0010 1111111
Q ss_pred hHHHHHhhcCCChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHH
Q 039943 338 GIMIAVTISQSSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLL 417 (581)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~ 417 (581)
...+.-..+ +..-.-...-.. .++++...+..+..+..+++ .+...+...+.+|++.| +.+.++++
T Consensus 261 ~~~~~DGv~--til~~~~~fg~~----~~gls~~~lll~g~~~~vvA-~lg~ii~g~Ld~rfg~k-------~vl~~~lv 326 (438)
T COG2270 261 RFFYIDGVN--TILAMGGVFGAA----DLGLSSTELLLIGIALSVVA-ALGAIIAGFLDERFGSK-------PVLMIGLV 326 (438)
T ss_pred HHHHHhhHH--HHHHHHHHHHHH----HcCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCc-------eeehHHHH
Confidence 111000000 000000000000 11122233332222222222 22233344466665555 46666666
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHH
Q 039943 418 FSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGL 497 (581)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 497 (581)
+..+..+.....+. +..+| +.-.+.+...+.....+-+|..+.+|++..+...|++++
T Consensus 327 i~~~~~~~~~~~~~-------------------~~~f~---i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyal 384 (438)
T COG2270 327 ILSIAALYLIFLEG-------------------ELDFW---ILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYAL 384 (438)
T ss_pred HHHHHHHHHHHccc-------------------cHHHH---HHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhh
Confidence 55544433332211 12222 223556677778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 039943 498 GMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLAC 556 (581)
Q Consensus 498 ~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 556 (581)
....+.++++.+.+.+.+.++. ....+..+.++.+++.+..+..
T Consensus 385 tgra~S~~gp~lv~v~t~iTg~---------------~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITGS---------------SRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhcc---------------hhhHHHHHHHHHHhhHhhEEee
Confidence 9999999999999999887642 2344555566666666554443
No 158
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.20 E-value=1.1e-09 Score=115.28 Aligned_cols=166 Identities=12% Similarity=-0.003 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.++...+..++....+....++++.|+. +.|++..+.+.+.++..++..+..++.|++.|| +|+|+++..+.+...++
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~ 283 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVR 283 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHH
Confidence 3454555555556666667788888985 589999999999998889999999999999999 79999999999888888
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.+++...+ +.+.+++..++.|++.+...+....++.+. ++ +++++..+.
T Consensus 284 ~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~ 332 (382)
T PRK11128 284 WGLMGSTT-----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PG-------SEVIRLQAL 332 (382)
T ss_pred HHHHHhhh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CH-------hhhHHHHHH
Confidence 77776665 677788889999999998888888887775 33 346778887
Q ss_pred HH-HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHH
Q 039943 187 YY-VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSA 226 (581)
Q Consensus 187 ~~-~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~ 226 (581)
+. ....+|..+||.++|++.|.+|+ ..|+..+++.++++
T Consensus 333 ~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 333 YSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 76 45578889999999999999887 45665555555443
No 159
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.19 E-value=6.9e-10 Score=113.11 Aligned_cols=160 Identities=10% Similarity=0.031 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhh--cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGE--YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
++...+..++....-.++..|++.|+.+. +|++.+++++..+.+..+++++.++++++.|| +|+||++.++.++.++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHH
Confidence 44433444443334556788999999753 79999999999999999999999999999999 7999999888877777
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.++....+ +... ..+..+.|++.+..+|...+...+.+|++ .+++.+
T Consensus 221 ~~~l~~~~~-----------------------~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~--------~~~asa 268 (310)
T TIGR01272 221 LSIGAALTH-----------------------GYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH--------TSQGSG 268 (310)
T ss_pred HHHHHHHcC-----------------------CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh--------hhhhHH
Confidence 665554433 1222 23455789999999999999988888762 233334
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHH
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVI 221 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~ 221 (581)
+. ....+|+++.|.+.|.+.|..|.+.+|++..++
T Consensus 269 i~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 269 IL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 43 456799999999999999988988888765554
No 160
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.18 E-value=2.7e-09 Score=113.41 Aligned_cols=353 Identities=15% Similarity=0.117 Sum_probs=203.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchh-hHHHHHHH----HHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTA-GTNVLLIW----TAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-~~~i~~~~----~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+...+.....+........+....++.+..+ .+...... .+...+.++.-|.++|| +|||..+...++...+..
T Consensus 28 fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~~l~~ 106 (463)
T KOG2816|consen 28 FLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDR-YGRKVVLLLPLFGTILPA 106 (463)
T ss_pred HHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHHHHhH
Confidence 3333333333444455555555444443322 23333333 57788999999999999 699999999998888888
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHH--hccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSL--GGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+...+.. +++++ +.++ +.+...+...++++|.... ++|...++
T Consensus 107 ~~~~~~~-------------------------~~~~~---~~~l~g~~~~~~s~~~a~vadis~~-------~~R~~~~g 151 (463)
T KOG2816|consen 107 LCLLFQG-------------------------YWFFL---LLGLSGGFSAIFSVGFAYVADISSE-------EERSSSIG 151 (463)
T ss_pred HHHHHHH-------------------------HHHhh---hcccccchhhhhhhhhhheeeccch-------hHHHHHHH
Confidence 8777754 22222 3332 2344566677888888777 67999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcccccCCCCChhhhHHHHHHHHHhhcccccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFYVQSKANTSLLTGLIQVLVASYKNRHIKLS 265 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (581)
+.+.....+..++|.+++.+.+..|...+|.+..+..++..+......|+..+++.++.. ..+.. .+
T Consensus 152 ll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~------------~~~~~-~~ 218 (463)
T KOG2816|consen 152 LLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA------------TLREL-TP 218 (463)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc------------ccccc-CC
Confidence 999999999999999999999999999999999988888777666655543322211100 00000 00
Q ss_pred CccccccccCCCCCccccCCcchhhhhhhhhccCCCCCCCCCCCCCCCCCccchhhHHHHHhHHhhHhHHHhhHHHHHhh
Q 039943 266 SQTTEEMYHPRKGSMLLVPSENLRCLNKACIIKHPGQDSTPDRRASNPWSLCTVDQVEELKALIKVIPLWSTGIMIAVTI 345 (581)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (581)
.....+.. ..+++.. ...++.|..+..+.........-..-
T Consensus 219 -------------------~~~~~~~~------------------~~~~~~~--~~~~~~r~~l~l~l~~~~~~~~~~~~ 259 (463)
T KOG2816|consen 219 -------------------GSLDSSHV------------------ADAFQSL--TKVGPDRLLLLLLLVAFLSSLPEAGG 259 (463)
T ss_pred -------------------Ccccchhh------------------hhhhhhh--cccCCCccchHHHHHHHHHHHHHhcC
Confidence 00000000 0000000 00011122221111111111111000
Q ss_pred cCCChhheecccCCCCCCCCcccCcccccc-------hhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHH
Q 039943 346 SQSSFPVLQASTMDRHITPNFEIPSGSFGI-------FTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLF 418 (581)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~ 418 (581)
.+-..+++. +.. +.++....+. ...+..++..|+ +.+.++.| +.+..|+..
T Consensus 260 ~~~~~~~yl----~~~----f~w~~~~~s~~~~~~~~~~~i~~l~~~~~-------l~~~l~~~-------~~i~lGl~~ 317 (463)
T KOG2816|consen 260 ASDVLLLYL----KAK----FGWNKKEFSDLLSLVSILGIISQLLLLPL-------LSSILGEK-------RLISLGLLS 317 (463)
T ss_pred ceeEEEEEE----eee----cCcCHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHhhh-------hHhhHHHHH
Confidence 010111111 111 1233322221 122222222222 34444444 478888888
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHH
Q 039943 419 STASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLG 498 (581)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~ 498 (581)
..+.+.++++.. ..|... .............|...+++...+.++.+|..+++....
T Consensus 318 ~~~~~~~~af~~----------------------~~w~~~-~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 318 EFLQLLLFAFAT----------------------ETWMMF-AAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGI 374 (463)
T ss_pred HHHHHHHHHHhc----------------------cchhhh-HHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHH
Confidence 888888888743 333322 223334445777888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhh
Q 039943 499 MSVASLVASFIMNAVDEITK 518 (581)
Q Consensus 499 ~~ig~~i~~~i~~~i~~~~~ 518 (581)
..+.+.+++.+.+.+...+.
T Consensus 375 ~~l~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 375 EGLSGVVSPALYGNIFALTL 394 (463)
T ss_pred HHHhhhhhHHHHHHHHHHHH
Confidence 99999999999888876554
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.17 E-value=6e-10 Score=115.51 Aligned_cols=154 Identities=12% Similarity=0.044 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHHHhhhh-hHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLM-PNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
.++...+..++....+++.. .+.|.|.++.+|.+..+.+.+.....++..++.++.|++.|| +|||+.+..+.++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHH
Confidence 44555555556666666665 677777777799999999999999999999999999999999 7999999888777777
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+..+..+.. + +.+.+++..++.|++.+...+...+++.|.+|+ +.|++..+
T Consensus 290 ~~~~~~~~~---------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~ 340 (365)
T TIGR00900 290 AILVVGLTP---------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA-------ELLGRVFG 340 (365)
T ss_pred HHHHHHhhc---------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHHH
Confidence 766666654 1 266777888999999999999999999999998 77999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhcccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLG 210 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g 210 (581)
+.+...++|..++|.++|++.+.+|
T Consensus 341 ~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 341 AQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999987654
No 162
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=1.1e-09 Score=115.30 Aligned_cols=170 Identities=11% Similarity=0.039 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
+......++.....+....+.++|+.+.+|++..+.+++.+...++..++.++.|++.|| +|+|+.+..+..+.+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHH
Confidence 333333444444555556677888888899999999999999999999999999999999 7999999988888777775
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
+.....+ +.+......++.+++.++..+.......+..+++ +.++.. ..+
T Consensus 281 ~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~ 330 (382)
T PRK10091 281 MLFFFGG----------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGG------ELLGAA--GGQ 330 (382)
T ss_pred HHHHHHh----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc------hHHHHH--HHH
Confidence 5544320 2233444445555655444444443333333221 234443 335
Q ss_pred HHHhhHHHHHHHHHHhhhcc-ccchhhhHHHHHHHHHHHHHH
Q 039943 189 VSVLASSMVAVTCIVYIQDN-LGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~-~g~~~~f~~~~~~~~i~~~~~ 229 (581)
....+|..+||.++|++.+. .+|++.+.+.++..++.....
T Consensus 331 ~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 331 IAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 56789999999999999885 689999998877665554433
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.16 E-value=6.5e-10 Score=119.13 Aligned_cols=178 Identities=16% Similarity=0.132 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH-
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL- 105 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~- 105 (581)
.++...+..++.....+++..++|.|+++..|++..+++++..++.++..++.+++|+++|| +|+++....+..+..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHH
Confidence 34555556666667778888999999998899999999999999999999999999999999 6754433333322222
Q ss_pred --HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 106 --GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 106 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
+...+.... ..+.+..+...++.|++..+..........|.+|+ +.|+++
T Consensus 331 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~ 382 (438)
T TIGR00712 331 TIAVIVYWMNP---------------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK-------KAAGTA 382 (438)
T ss_pred HHHHHHHHhcC---------------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh-------hheeee
Confidence 112212211 00223333344445544332222223456788887 679999
Q ss_pred HHHHHHHHhhH-HHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcC
Q 039943 184 FSWYYVSVLAS-SMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 184 ~~~~~~~~~~g-~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
.++.+...++| ..++|.+.|++.++.||...|++.+...+++.+..+..+
T Consensus 383 ~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 383 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred hhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99998887776 578999999999999999999887776666655544433
No 164
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.16 E-value=6.5e-10 Score=118.13 Aligned_cols=164 Identities=11% Similarity=-0.056 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhh-hcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhH-HHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCG-EYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMI-GFGCITYLL 105 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~-~~~~~~~~~ 105 (581)
++...+..++....++++..++|.|+++ ..+++..+++++.....++..++.+++|+++|| ++||+.. ....++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~~ 322 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAAA 322 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHHH
Confidence 4555566667777888899999999976 357788899999999999999999999999999 7987753 333333333
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+..+..... +....+.+..+.++|.....+...+...|.+|+ +.|+++++
T Consensus 323 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~a~g 372 (412)
T TIGR02332 323 GWLLASATD-----------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL-------QARAIAIA 372 (412)
T ss_pred HHHHHHhcC-----------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccch-------HHHHHHHH
Confidence 332221111 111112222233333333334444555667776 67999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHH
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVIS 222 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~ 222 (581)
+.+...++|.+++|.+.|.+.+..| |++.|++.++..
T Consensus 373 ~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 373 VINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 9999999999999999999998774 999988766543
No 165
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=1.6e-09 Score=117.23 Aligned_cols=156 Identities=15% Similarity=0.019 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+...+...++..+.+.....+.|.|++..+|.+..+.+++.....++..++.++.|++.|| +|||+++..+..+..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHH
Confidence 4445555666666655555667778877799999999999999999999999999999999 699999998888777776
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.++.+... ..+...+....++.|++.+...+...++..+..|+ +.++.++++.
T Consensus 342 ~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~ 394 (471)
T PRK10504 342 LLFMLVAL--------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD-------NLASSGNSLL 394 (471)
T ss_pred HHHHhccc--------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-------HhccchHHHH
Confidence 66555330 01233344556777888888888888999998887 6699999999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccc
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGW 211 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~ 211 (581)
+....+|..+|+.++|.+.+..|+
T Consensus 395 ~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 395 SMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999988776655
No 166
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.13 E-value=1.4e-09 Score=104.15 Aligned_cols=156 Identities=12% Similarity=0.076 Sum_probs=125.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHH
Q 039943 22 KGGLRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCI 101 (581)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~ 101 (581)
+.....+|.+....++..++.+=+...-+.++++++|+|+..++.+.+.....+++..++.|.++|| .||+-..+.+.+
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHH
Confidence 3444557888888888888888788888999999999999999999999999999999999999999 599977766654
Q ss_pred -HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhh
Q 039943 102 -TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGAL 180 (581)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 180 (581)
+..++..++.++. +.=+.+..++|+.........+..++...|+ ++.
T Consensus 339 ~~tl~~H~~l~Ft~-------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE-------~qL 386 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTF-------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPE-------EQL 386 (459)
T ss_pred HHHHHHhhhHHhhh-------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH-------HHh
Confidence 4555666666654 1124556667777666555566667777777 679
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHhhhcccc
Q 039943 181 QSYFSWYYVSVLASSMVAVTCIVYIQDNLG 210 (581)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g 210 (581)
|++++..+...|+|-++.|++.|.+.++-|
T Consensus 387 GTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 387 GTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred cchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 999999999999999999999999998755
No 167
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.13 E-value=8.2e-10 Score=119.60 Aligned_cols=172 Identities=8% Similarity=0.013 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchh-----hHH--HHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYP-----MIG--FGCI 101 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~-----~~~--~~~~ 101 (581)
+.+.+..++.....+++..++|.|+.+++|++..+++.+.+++.++..++.+++|+++|| +|||+ ... +..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHHH
Confidence 334444444444556677889999988899999999999999999999999999999999 68762 222 2222
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+..+..++..... +........++.+++.+...+...+++.+..| +.|+
T Consensus 334 l~~i~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~g 382 (476)
T PLN00028 334 LGGVFCIWLGRAN-----------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR--------RSLG 382 (476)
T ss_pred HHHHHHHHhcccc-----------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh--------hhch
Confidence 2222222222222 33444444555666555555556666666543 4588
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcC
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
...++.+.+.++|+.++|.+.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus 383 ~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 383 VISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 8999887766777777765543 22335799999998888877776665543
No 168
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.13 E-value=1.4e-09 Score=113.00 Aligned_cols=152 Identities=12% Similarity=0.044 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc-CchhhHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCV-GRYPMIGFGCITYLL 105 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~-Grr~~~~~~~~~~~~ 105 (581)
..+.+.+..++....++++..++|.|++ +.|++..+.+.+.+++.++..++.++.|+++|| + +||+.+.++.++.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILI-SHGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLV 275 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHH
Confidence 3444455555667777888889999997 479999999999999999999999999999999 7 566677777777777
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+.+.+.. +.... ...++.|++.|...|...+.+.+..+++ ++++...+
T Consensus 276 ~~~~~~~~~-----------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~~~g~~~~ 325 (355)
T TIGR00896 276 GLCGLLFAP-----------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQA------AQAAALSA 325 (355)
T ss_pred HHHHHHHhh-----------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCH------HHHHHHHH
Confidence 777666654 11111 1356789999998888777776655442 45788888
Q ss_pred HHHHHHhhHHHHHHHHHHhhhcccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLG 210 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g 210 (581)
+.+...++|..++|.+.|++.++.|
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888999999999999998775
No 169
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.13 E-value=2e-09 Score=114.82 Aligned_cols=146 Identities=14% Similarity=0.114 Sum_probs=108.4
Q ss_pred HhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCC
Q 039943 42 SMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQP 121 (581)
Q Consensus 42 ~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (581)
.+.+..++|.|+++ .|++..+.+.+.+...++..++.++.|+++|| +|||+++..+.++..+.........
T Consensus 247 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~------- 317 (426)
T PRK12307 247 NWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRIP------- 317 (426)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 34466788888875 69999999999999999999999999999999 7999999988877666554443322
Q ss_pred CcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 122 PACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
+.....+....+..+++..+..+..+.++.|.+|+ +.|+++.++.+...++|+.++|.+
T Consensus 318 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~~~~~gp~~ 376 (426)
T PRK12307 318 --------------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPL-------EVRGLGTGLIYNLAATSGTFNSMA 376 (426)
T ss_pred --------------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcH-------HHHhhhhhHHHHHHhHHHHHHHHH
Confidence 00122222222223333334446677888999998 679999999999999999999999
Q ss_pred HHhhhccccchhhhHH
Q 039943 202 IVYIQDNLGWKVGFGV 217 (581)
Q Consensus 202 ~~~i~~~~g~~~~f~~ 217 (581)
.|++.+.+|+....++
T Consensus 377 ~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 377 ATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHcccHHHHHHH
Confidence 9999998887654333
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.12 E-value=5.6e-10 Score=116.23 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=117.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH--HH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT--YL 104 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~--~~ 104 (581)
.++.+.+..++......++..+++.|+.+.+|++..+.+.+.+.+.++..++.++.|+++||..+||+........ ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 3455556666667777778889999999999999999999999999999999999999999832334333222111 11
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++........ ..+....+...++.|+...+..+....+..|.+|+ +.|+++.
T Consensus 297 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 348 (379)
T TIGR00881 297 VSLLVYWLNP---------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPK-------KAAGTAA 348 (379)
T ss_pred HHHHHHhcCc---------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc-------chhHHHH
Confidence 1222221111 11334455556667766556566667788999988 6799999
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhh
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGF 215 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f 215 (581)
++.+...++|..++|.+.|++.+..||++.|
T Consensus 349 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 349 GFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999999998765
No 171
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.12 E-value=1.5e-09 Score=114.68 Aligned_cols=169 Identities=8% Similarity=0.014 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhc---CCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEY---NMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
+...+..++....+.....+.+.|+.+.+ +.+....+.+.++..+...++.+..|++.|| +|||+.+.++.++.++
T Consensus 218 ~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 218 WMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHH
Confidence 33333333444444445556777877655 5566677888888888999999999999999 7999999999888888
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+..+...+. +.+.++...++.|++..........+..+..++ +.+++..+
T Consensus 297 ~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~at~~~ 346 (396)
T TIGR00882 297 RIIGSSFAT-----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDV-------RLSATIYL 346 (396)
T ss_pred HHHHHHhcC-----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------ceEEEeeh
Confidence 777766655 566677788888888766555556666666665 44666665
Q ss_pred H-HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHH
Q 039943 186 W-YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 186 ~-~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~ 228 (581)
. ++....+|..++|+++|++.+..||+.+|.+.+++.++..+.
T Consensus 347 ~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 347 IGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 5 557789999999999999999999999999988776655444
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=1.1e-08 Score=104.20 Aligned_cols=85 Identities=11% Similarity=-0.099 Sum_probs=70.6
Q ss_pred chhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc-------
Q 039943 136 WSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDN------- 208 (581)
Q Consensus 136 ~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~------- 208 (581)
..++..++++.++.|.|.+..++....++++..++ +++.+..++...+..+|..++|++++.+...
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~-------~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~ 79 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPI-------ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSM 79 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCc-------chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhh
Confidence 34788999999999999999999999999999887 5688999999999999999999999977631
Q ss_pred ---------ccchhhhHHHHHHHHHHHH
Q 039943 209 ---------LGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 209 ---------~g~~~~f~~~~~~~~i~~~ 227 (581)
.+|+++|++.+.+.++..+
T Consensus 80 ~~~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 80 QVATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688888865555444333
No 173
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.11 E-value=2.4e-08 Score=109.22 Aligned_cols=197 Identities=16% Similarity=0.275 Sum_probs=145.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWL 112 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 112 (581)
+..+...+.. +.+.....-+.+.|+++.++.|++.+.+-++..+...+..+.+-| .-|-|.+-++.++++++.+++++
T Consensus 104 ~~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgsll~al 181 (735)
T KOG3626|consen 104 LAAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGSLLFAL 181 (735)
T ss_pred HHHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHHHHHhC
Confidence 3334444444 777888888999999999999999999999999999999999999 57889999999999999999887
Q ss_pred hhhcccC-----------CCCc--------c---ccc-cccccc-----ccch-hHHHHHHHHHHHHHhccccchhhhhh
Q 039943 113 TTILSQA-----------QPPA--------C---DQL-RSDCES-----ATWS-QLMLLYSALGLMSLGGGGIRSSSLAF 163 (581)
Q Consensus 113 ~~~~~~~-----------~~~~--------~---~~~-~~~~~~-----~~~~-~~~~~~~~~~l~g~~~g~~~~~~~~~ 163 (581)
-.....- ...+ + ++. +.+.++ .++. .+.+++.+.++.|+|....++.-.+|
T Consensus 182 PHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisY 261 (735)
T KOG3626|consen 182 PHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISY 261 (735)
T ss_pred hHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcc
Confidence 5322220 0011 0 111 111111 2222 34478889999999999999999999
Q ss_pred hhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc---c----------------cchhhhHHHHHHHHH
Q 039943 164 GAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDN---L----------------GWKVGFGVPAVISLL 224 (581)
Q Consensus 164 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~---~----------------g~~~~f~~~~~~~~i 224 (581)
+=|...+ +.-...+++.+....+|.++|.+++++.... + .|...|++++.+.++
T Consensus 262 iDDnvk~-------~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 262 IDDNVKK-------KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccccccc-------cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 9888776 4578888999999999999999998886421 1 166677777777777
Q ss_pred HHHHHHhcCCcccc
Q 039943 225 SALSFFLASPFYVQ 238 (581)
Q Consensus 225 ~~~~~~~~~~~~~~ 238 (581)
..+.++++++..++
T Consensus 335 ~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 335 SAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHhCcccCcc
Confidence 77776666555443
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.11 E-value=9.5e-10 Score=117.63 Aligned_cols=163 Identities=15% Similarity=0.091 Sum_probs=123.3
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.++...+..++.....+......+.|.+..++ +..+.+++..+..++..++.++.|+++|| +|||+++..+.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 344555556666666666555555555555555 56667788888889999999999999999 7999999999888888
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+...+.. .+.+.+++..++.|++.+...+...++++|..+..+.....+.++..++
T Consensus 300 ~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 357 (437)
T TIGR00792 300 GYLIFFFAG----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYS 357 (437)
T ss_pred HHHHHHHcc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHH
Confidence 777665542 1455666777888999999999999999998764321111156899999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccch
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWK 212 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~ 212 (581)
+.+....+|..+++.+.|++.+..||.
T Consensus 358 ~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 358 VRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998877764
No 175
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.11 E-value=3.4e-09 Score=114.97 Aligned_cols=171 Identities=13% Similarity=0.093 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
..+++..++.++....+...+|.+..+.+|.+....|++.+++.++..++.++.+++.+| +++++++..+.++++++.+
T Consensus 221 ~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~ 299 (524)
T PF05977_consen 221 RSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALL 299 (524)
T ss_pred HHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHH
Confidence 333344444444444455667888888999999999999999999999999999999999 7999999999999998888
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
.+++++ +.+..++..++.|++.........+.+-+..|+ +.||+.+++++
T Consensus 300 ~lal~~-----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~-------~~~GRv~si~~ 349 (524)
T PF05977_consen 300 LLALSP-----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPD-------WVRGRVFSIYQ 349 (524)
T ss_pred HHhcch-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHhHHHHHHH
Confidence 888887 777788888999999998888888888888888 78999999999
Q ss_pred HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 189 VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+....+..+|..+.|.+.+..|-+..+.++++..+++.++..
T Consensus 350 ~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 350 MVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888776665555443
No 176
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.10 E-value=5.8e-09 Score=113.00 Aligned_cols=154 Identities=8% Similarity=0.051 Sum_probs=111.7
Q ss_pred HHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccc
Q 039943 51 LYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSD 130 (581)
Q Consensus 51 ~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (581)
+++.++.|++..+..+......+...++.+++|+++|| +|||++++.+.++.+++.++++......
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~------------- 360 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQ------------- 360 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcC-------------
Confidence 34445789988888888888888999999999999999 7999999999999888887776543100
Q ss_pred cccccchhHHHHHHHHHHHHHhccc-cchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH------
Q 039943 131 CESATWSQLMLLYSALGLMSLGGGG-IRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV------ 203 (581)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~------ 203 (581)
.... ......++.+++.+. ..|...++++|.+|+ +.|+++.++.+...++|..+++.+.+
T Consensus 361 -----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~ 427 (479)
T PRK10077 361 -----APGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPN-------AIRGKALAIAVAAQWIANYFVSWTFPMMDKNS 427 (479)
T ss_pred -----cccH-HHHHHHHHHHHHHhccccchhHHHhHhhCCh-------hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 0011 222333444444433 347788999999998 67999999999988888888865554
Q ss_pred hhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 204 YIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 204 ~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
++.+..+|++.|++.++..+++.+..+.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 428 WLVAHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred chhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 4446788888888877766655554443
No 177
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.10 E-value=3.3e-09 Score=111.80 Aligned_cols=175 Identities=15% Similarity=0.051 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHH-HHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTA-ATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
++..+...++...+......+.++|+.+ .|++.++.+++..+... ...++.+++|++.|| +|+|+++..+.++.++.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 4444445555556666666778888864 79999999999888764 666778999999999 79999998877665333
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
........+... ..+....+....+.+++.+...+...+...+..+++ +.+++.+++
T Consensus 288 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~g~~~~~ 344 (390)
T TIGR02718 288 ALLWFAQAAFWL-----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG------DQAGTDVTA 344 (390)
T ss_pred HHHHHHHHHccc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc------cchHHHHHH
Confidence 322221110000 002333344445556667777777777777766542 358999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~ 227 (581)
.+...++|..++|.++|++.+..||+..|.+.+++.+++.+
T Consensus 345 ~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 345 VQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887776665543
No 178
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.08 E-value=6.5e-09 Score=109.79 Aligned_cols=166 Identities=11% Similarity=0.026 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH-
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG- 106 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~- 106 (581)
++...+..++.....++...+.++++.+++|++..+.+.+...+.++..++.++.|++.|| .+| +.+..+.++..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~~-~~l~~~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SVK-LALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cch-hHHHHHHHHHHHHH
Confidence 4444344444445555666666555556889999999999999999999999999999999 554 4444444443333
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.++....+ +.+.+....++.|++.+...+...+++.+..|+ ++++..+.
T Consensus 296 ~~l~~~~~-----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 344 (394)
T PRK10213 296 LVLTLWGS-----------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLAD--------QAEKAGSI 344 (394)
T ss_pred HHHHHHhh-----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc--------cHHHHHHH
Confidence 33333333 456677788889999999999999888888764 24455666
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSA 226 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~ 226 (581)
.....++|..+||.++|++.+..|++..+...+++.++..
T Consensus 345 ~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 345 QVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 6677789999999999999999999888888776554443
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.08 E-value=6.7e-09 Score=110.08 Aligned_cols=171 Identities=12% Similarity=-0.047 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
++...+...+.....+....+.|.|+.+++|++..+.++......++..++.++.|+++|| +|+|+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 3444444444455555566677888888899999999988888888889999999999999 699999999988888777
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.+..+..... ..+...++.+.++.|++.+...+......... ++ ++|++..+.+
T Consensus 296 ~~~~~~~~~~------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~-------~~~g~~~~~~ 349 (406)
T PRK15402 296 LLAALATVIS------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SD-------VSKGTVSAAM 349 (406)
T ss_pred HHHHHHHHcc------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cc-------ccccHHHHHH
Confidence 7766643110 11455677788889999888777666554332 22 3589999999
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLS 225 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~ 225 (581)
+....+|..+|+.+.+++.+..++....+..++..++.
T Consensus 350 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 350 GMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 99999999999999999988877665555544444433
No 180
>PRK10054 putative transporter; Provisional
Probab=99.07 E-value=2e-09 Score=113.72 Aligned_cols=173 Identities=14% Similarity=0.088 Sum_probs=128.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhh--hcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCG--EYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
.++...+..++..+.+.....+.+.|+.. +.+.+....+++..+..+......++.|++.|| +++|+.+..++++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHHH
Confidence 33444444555555544444566666643 445666677788888877777778899999999 699999999988888
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
++.....+..+ +.+.+++..++.|+|.+...|...+++.+..|+ +.|++.+
T Consensus 286 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~-------~~~~~~~ 336 (395)
T PRK10054 286 IGLVGFIFSGN----------------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPP-------GMKASYF 336 (395)
T ss_pred HHHHHHHHcch----------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCc-------ccceehH
Confidence 88776665420 455566778899999988888888899998887 5578888
Q ss_pred HHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 185 SWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 185 ~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+..+ ...+|..+||.++|++.|+.|....|++.+....++++...
T Consensus 337 ~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 337 SAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 7654 56689999999999999999988888877666665555544
No 181
>TIGR00895 2A0115 benzoate transport.
Probab=99.06 E-value=3e-09 Score=111.64 Aligned_cols=145 Identities=12% Similarity=-0.023 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
+.+.+..++....++.+..++| ++.+++|++..+.+++.+...++..++.++.|+++|| +|||+.+....+..+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 330 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHH
Confidence 3344445556666677777777 6667899999999999999999999999999999999 6999555444433333333
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
+..... +...++...++.|++.+...+...+++.|.+|+ +.|++++++.+
T Consensus 331 ~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~ 380 (398)
T TIGR00895 331 VGSTLF-----------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT-------AIRATGVGWAI 380 (398)
T ss_pred HHHHhh-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-------HHHHHHHHHHH
Confidence 322222 455567778889999999999999999999998 77999999999
Q ss_pred HHHhhHHHHHHHHHHhh
Q 039943 189 VSVLASSMVAVTCIVYI 205 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i 205 (581)
....+|..+||.++|++
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999999876
No 182
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.04 E-value=3.7e-09 Score=114.64 Aligned_cols=154 Identities=13% Similarity=0.061 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
++...+..++..+.+++...++|.|+++.+|++..+++++.....++..++.++.|++.|| +|||+++.++.++..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHHHH
Confidence 4445566667777788888899999999999999999999999999999999999999999 799999999988888877
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.++.+... ...+.+.+....++.|++.+...+.......+..|+ ++|+++.++.
T Consensus 336 ~~~~~~~~-------------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~ 389 (485)
T TIGR00711 336 YWRAFTFT-------------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-------HKIARGSSLS 389 (485)
T ss_pred HHHhccCC-------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-------HHHhHHHHHH
Confidence 77663210 011445566668889999998887777777788887 6799999999
Q ss_pred HHHHhhHHHHHHHHHHhhhcc
Q 039943 188 YVSVLASSMVAVTCIVYIQDN 208 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~ 208 (581)
+...++|..+|+.+.+.+.++
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988764
No 183
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.03 E-value=4.4e-09 Score=114.58 Aligned_cols=152 Identities=11% Similarity=-0.018 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+....+..++..+.+++...++|.|+++.+|+++.+++.......++..++.++.|++.|| +|+|+.+..+.++..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSALSF 339 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHH
Confidence 3444455666667777888889999999999999999999999999999999999999999 799999998888888777
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.++..... ..+.+......++.|+|.|...+.....+.+..|+ ++++.+.+++
T Consensus 340 ~~l~~~~~--------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~-------~~~g~~~~~~ 392 (495)
T PRK14995 340 YGLAMTDF--------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPP-------EKAAAAGAIE 392 (495)
T ss_pred HHHHHhcC--------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCH-------HhcchHHHHH
Confidence 66654330 11344456678889999999888888888888887 6699999999
Q ss_pred HHHHhhHHHHHHHHHHhhhc
Q 039943 188 YVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~ 207 (581)
+...++|..+|+.+.|.+.+
T Consensus 393 ~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 393 TMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998854
No 184
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.03 E-value=4.9e-09 Score=114.41 Aligned_cols=166 Identities=17% Similarity=0.082 Sum_probs=109.8
Q ss_pred HHHHHHHHhhhhhHHHHHhhhhcCCcchhhHH------------HHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 35 EAFERMASMGLMPNMILYLCGEYNMETTAGTN------------VLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~------------i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
.++..+.+|++..++|.+++ +.|++..+++. ...+..++..++.++.++++|| +|||++++++.++
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~ 374 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHH
Confidence 34456678888888888885 67887553321 1233444556688899999999 7999999988877
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
..++..+..+..+.. + +...+....+...++..+..+....+.+|.+|. +.|++
T Consensus 375 ~~~~~~~l~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~-------~~R~~ 428 (502)
T TIGR00887 375 LTVLFFVLGFAYNHL------------------S-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPT-------RYRST 428 (502)
T ss_pred HHHHHHHHHHHHHhc------------------c-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCch-------hHHHH
Confidence 777666555432000 0 111111111112222233445677788999999 77999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhcc----------ccchhhhHHHHHHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDN----------LGWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~----------~g~~~~f~~~~~~~~i~~~~ 228 (581)
+.++.+....+|+.++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 429 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 429 AHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998773 34455667666665555443
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.01 E-value=8.2e-09 Score=111.52 Aligned_cols=177 Identities=13% Similarity=0.002 Sum_probs=122.2
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhH--------H
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMI--------G 97 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~--------~ 97 (581)
+.++...+..++....++.+..++|.|+.+.+|++..+.++..++..++..++.+++|+++|| +++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHH
Confidence 345677777888888888999999999999999999999999999999999999999999999 5654321 1
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccc
Q 039943 98 FGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSK 177 (581)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (581)
.+......+..+..... . ..+....++...+.+.+.+...+.......|..|
T Consensus 340 ~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------- 391 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPY-L-------------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-------- 391 (465)
T ss_pred HHHHHHHHHHHHHHHHH-c-------------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh--------
Confidence 11111111111111111 0 0023333444455555555555555555555554
Q ss_pred hhhhHHHHHHHHHHhhHHHHHHHHHHhhhccc---cchhhhHHHHHHHHHHHHHHHh
Q 039943 178 GALQSYFSWYYVSVLASSMVAVTCIVYIQDNL---GWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 178 ~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~---g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
+.++...++.+...++|+.++|.+.|++.+.. +|...|.+.++..+++.+....
T Consensus 392 ~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 392 RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 35899999999999999999999999987643 4888888888777776655443
No 186
>PRK10133 L-fucose transporter; Provisional
Probab=99.01 E-value=9.1e-09 Score=110.19 Aligned_cols=166 Identities=11% Similarity=0.025 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHh-hhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYL-CGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+...+..++.....++...+.+.|+ ++.+|+++.++++....+.+++.++.+++|++.|| +|||+++..+.++.+++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHH
Confidence 3344445555566666677888886 56789999999999999999999999999999999 799999998877776665
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.+..+.+ +. ..+....+.|++.+...|...+...+.+|++ .+.+.++.
T Consensus 340 ~~~~~~~-----------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~--------~~~as~l~ 387 (438)
T PRK10133 340 LISAFAG-----------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD--------TKYGSSFI 387 (438)
T ss_pred HHHHHcC-----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh--------hccchhHH
Confidence 5554443 21 1245567899999999999999999987752 23344444
Q ss_pred HHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALS 228 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~ 228 (581)
.. ..+|+.++|.+.|++.+..| -+..|+++.+..+.....
T Consensus 388 ~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 388 VM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred hH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 32 44678888889999999887 788888776655544433
No 187
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.01 E-value=1.7e-08 Score=106.99 Aligned_cols=152 Identities=13% Similarity=0.101 Sum_probs=104.8
Q ss_pred hHHHHHhhhhcCCcchhhHHHHHHHH-HHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 039943 47 PNMILYLCGEYNMETTAGTNVLLIWT-AATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACD 125 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~~~~~~i~~~~~-~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (581)
.+.++|+.+++|++.++.+++..... ++..++.+++|++.|| +|||+.+..+.++..+..+.+......+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~-------- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTP-------- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 44556777789999999999886654 4678999999999999 7999998877776665544332211000
Q ss_pred ccccccccccchhHHHHHHHH----HHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 126 QLRSDCESATWSQLMLLYSAL----GLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~----~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
.+.+.+++.. +..|++.+...+....++.+.+|. +.+ +++....++|..+++.+
T Consensus 301 -----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~l~~~~~~~~ 358 (402)
T PRK11902 301 -----------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA-------TQY----ALLSALASVGRVYVGPT 358 (402)
T ss_pred -----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-------HHH----HHHHHHHHHHHHHHHHH
Confidence 0333344433 345566666677777777777765 223 44444456677666678
Q ss_pred HHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 202 IVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 202 ~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
+|++.+..||+..|.+.+++.++++++.
T Consensus 359 ~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 359 SGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888777765554
No 188
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=1e-08 Score=123.35 Aligned_cols=163 Identities=12% Similarity=0.041 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcch-hhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETT-AGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~-~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++|| +++++++.++.++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHH
Confidence 34444444455555566778889999999999999 99999999999999999999999999 69999999888888887
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.+++.+.. +.+.+++..++.|++.+...+...+++.+..|+ +.|++++++
T Consensus 313 ~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~rg~~~~~ 362 (1146)
T PRK08633 313 LFLLPTAP-----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE-------KELGKVLAA 362 (1146)
T ss_pred HHHHHHhh-----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc-------cchhhhhHH
Confidence 77777665 566777888899999999888999999999888 669999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhc-cccchhhhHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQD-NLGWKVGFGVPAVI 221 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~-~~g~~~~f~~~~~~ 221 (581)
.++..++|..+++.+++.+.. .+++...|++.+.+
T Consensus 363 ~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 363 NNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999888877776643 23454555554443
No 189
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.98 E-value=1.2e-08 Score=108.92 Aligned_cols=164 Identities=15% Similarity=0.126 Sum_probs=133.9
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|....+++..++..++........+.|.+..+|.+ ...+.+..+..++..++.++.++++|| +|+|+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHH
Confidence 44566667777777777766777777777777876 567788888999999999999999999 6999999999999999
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.++..+.. +.+.+.+++..++.|++.+...+...++++|..+..+....+++.+..++
T Consensus 303 ~~~~~~~~~---------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 303 GFLLLFFLG---------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHH---------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 988888875 12778899999999999999999999999999885443222255788888
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccch
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWK 212 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~ 212 (581)
.......++.++++.+.+.+.+..|+.
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 999999999999999988886655544
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=98.98 E-value=7.5e-09 Score=111.28 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=123.7
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.+....+..++....++......+.|+++.+|.+....++......++..++.++.++++|| +|+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 344555555666666666666667778887888877666655555567778899999999999 7999999999988888
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+++.+.+ ..+.+.++...++.|+|.+...+...++.+|..|.++....+++++..++
T Consensus 307 ~~~~~~~~~---------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 307 GYLLFFWVS---------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHHHcC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 877766543 12456677778889999999999999999998875432111135688889
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGW 211 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~ 211 (581)
.++....+|.++|+.+.+.+.+..||
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999887665555
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.98 E-value=2.5e-08 Score=104.43 Aligned_cols=161 Identities=13% Similarity=0.168 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
++...+...+....++....+.|.|+++++|+++.+.+++.+...++..++.++.|++.|| +|||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 3334444444555566667777888888999999999999999999999999999999999 799999998888877777
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.++....... ..+...++...++.|++.+...+.......|..|+ +|+++.++.
T Consensus 287 ~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~ 340 (385)
T TIGR00710 287 VLLEITAILG------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH--------VAGTASALF 340 (385)
T ss_pred HHHHHHHHhc------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc--------cchHHHHHH
Confidence 6665543100 01344556667788898888888888888887653 478888888
Q ss_pred HHHHhh-HHHHHHHHHHhhhccccchhhhH
Q 039943 188 YVSVLA-SSMVAVTCIVYIQDNLGWKVGFG 216 (581)
Q Consensus 188 ~~~~~~-g~~~~p~~~~~i~~~~g~~~~f~ 216 (581)
+..... |...+| +.+.+.+..+|...+.
T Consensus 341 ~~~~~~~g~i~~~-~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 341 GTLRLVLGAIVGY-LVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHH-HHHhccccChHHHHHH
Confidence 776654 555555 4555555445544443
No 192
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.97 E-value=1e-08 Score=104.58 Aligned_cols=171 Identities=17% Similarity=0.208 Sum_probs=138.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.+...+++.++.+=+.-++......|-..++|++..+..++....++..+++++++|+|.|| +|-|+++.+++++..+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHH
Confidence 55666666666666666777888889988999999999999999999999999999999999 79999999999988887
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.+..-+.. ....+.+.-.+.|...|+.++..-++.++..|+ ++-++.+|+
T Consensus 332 ~~~~~~~~-----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~-------~k~~~fFgl 381 (438)
T COG2270 332 ALYLIFLE-----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPK-------GKEGRFFGL 381 (438)
T ss_pred HHHHHHcc-----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCC-------ccccceeeh
Confidence 76666654 233344555678999999999999999999999 557889999
Q ss_pred HHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALS 228 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~ 228 (581)
|......++.+||.+.+.+.+..| -|..+....+..++++++
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 999999999999999998877654 555555545555555444
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.97 E-value=1.1e-08 Score=108.18 Aligned_cols=154 Identities=12% Similarity=0.065 Sum_probs=113.5
Q ss_pred hhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 039943 44 GLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPA 123 (581)
Q Consensus 44 ~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (581)
....++|.|+++..+ ++.+.+++.++..++...+....+++.||.++.++.+..+.++..++..++..++
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 345667888876555 7788888888877766655555566665425767777788878887777776665
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 124 CDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
+...+.+..++.+++.+...|...+++.|..|+ +.|++.+++++...++|..+||.++|
T Consensus 296 --------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 296 --------------NLQQLFTLICLFYIGSIIAEPARETLSASLADA-------RARGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCc-------ccchhhhhHHHHHHHHHHHhcccchH
Confidence 455566667788888888889999999999988 56999999999999999999999999
Q ss_pred hhhccc---c-chhhhHHHHHHHHHHHHH
Q 039943 204 YIQDNL---G-WKVGFGVPAVISLLSALS 228 (581)
Q Consensus 204 ~i~~~~---g-~~~~f~~~~~~~~i~~~~ 228 (581)
++.+.. + ....|.+.++..+++.+.
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 355 WLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 998764 2 244555544444444433
No 194
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.97 E-value=7.4e-11 Score=128.27 Aligned_cols=165 Identities=13% Similarity=0.201 Sum_probs=3.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWL 112 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 112 (581)
+..++. ....+.+.....-++++|+++.+++|++.+.+-++..+..++..++++| ..|-|.+-++.+++++|.+++++
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhc
Confidence 334444 6677777777888999999999999999999999999999999999999 57778899999999999998887
Q ss_pred hhhcccC-CC--------------Ccc-----cccc-------cccccccchhHHHHHHHHHHHHHhccccchhhhhhhh
Q 039943 113 TTILSQA-QP--------------PAC-----DQLR-------SDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGA 165 (581)
Q Consensus 113 ~~~~~~~-~~--------------~~~-----~~~~-------~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~ 165 (581)
-.....- .. ..| ++.. .+.+......+..++++.++.|+|....++...+|+=
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 4422110 00 001 0000 0011112234678999999999999999999999999
Q ss_pred hccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 166 EQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 166 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
|..++ +.-....|+++....+|.++|.++++...
T Consensus 168 Dnv~~-------~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 168 DNVSK-------KNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp -----------------------------------------
T ss_pred ccccc-------ccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 99888 55788899999999999999998887653
No 195
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=3.5e-08 Score=104.82 Aligned_cols=186 Identities=10% Similarity=0.023 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
..|.+.+..++..-.+.++..++|.|+++.+. .........+..+...+..|++|+++|| +|+||++.++.+...++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHH
Confidence 35666666666666666777789999887653 3333333455667888999999999999 79999999998877776
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcc-----------
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENK----------- 175 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~----------- 175 (581)
.....+.. +. .+..++..+.+..+...++.|........++.+.||+.....
T Consensus 330 ~~~~~l~l--p~---------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~ 392 (462)
T PRK15034 330 SALLFLTL--PG---------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA 392 (462)
T ss_pred HHHHHHHh--cc---------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHH
Confidence 64433322 00 011246666666666666666667778888888887410000
Q ss_pred ---cchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccc-cchhhhHHHHHHHHHHHHHHHhc
Q 039943 176 ---SKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNL-GWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 176 ---~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~-g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
..++-+.+.|+......+|+.+-|.+.|...+.. ++...|+...+..+++..+.+..
T Consensus 393 ~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 393 QREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0024677888888888899999998878776664 57778888777766666555443
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.94 E-value=1.3e-08 Score=122.10 Aligned_cols=185 Identities=10% Similarity=-0.019 Sum_probs=132.8
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.++...+..++..+.++++..++|.|+++.+|.+..+.+++.+.+.+++.++.++.|+++|+ .++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHH
Confidence 345566666666667777788899999999999999999999999999999999999999998 5777776666666555
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+.+.+..... ...+. +...-.......+.+.+++..++.|++.+...+...+++.+..|+ +.|+++++
T Consensus 304 ~~~~l~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~G~v~g 373 (1140)
T PRK06814 304 FGLDLAFASSSV--PAEPA-QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANP-------AHRARVIA 373 (1140)
T ss_pred HHHHHHhccccc--ccccc-cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCc-------ccceeeeH
Confidence 554444320000 00000 000000000001456677888889999999999999999999998 66999999
Q ss_pred HHHHHHhhHHHHHHHHHHhhhc-cccchhhhHHHHHH
Q 039943 186 WYYVSVLASSMVAVTCIVYIQD-NLGWKVGFGVPAVI 221 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~-~~g~~~~f~~~~~~ 221 (581)
..+....+|..+++++++.+.+ ..++...|++.+++
T Consensus 374 ~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 374 ANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999999999999998863 45666666655443
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.94 E-value=4.9e-08 Score=103.12 Aligned_cols=159 Identities=13% Similarity=-0.035 Sum_probs=119.8
Q ss_pred HHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039943 39 RMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQ 118 (581)
Q Consensus 39 ~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (581)
..........++.|+++.+|.++.+.|++.+...++..++.+..+++.|| .++|+++..++. ..+..+...+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHH-HHHHHHHHHHHh----
Confidence 34444555667788888899999999999999999999999999999999 699998887753 333333334433
Q ss_pred CCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHH
Q 039943 119 AQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVA 198 (581)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 198 (581)
+.+......++.|++.+...+...+.+.+..|+ + ..++++.++.+...++|..++
T Consensus 292 -------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~-~-----~~~g~~~a~~~~~~~~~~~~~ 346 (393)
T PRK11195 292 -------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHV-L-----VGAGHSIAVQNFNENLAMLLM 346 (393)
T ss_pred -------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcc-c-----ccchhHHHHHhHHHHHHHHHH
Confidence 455566777788999988888888887775333 2 237999999999999999999
Q ss_pred HHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 199 VTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 199 p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
..+.+.+ +..|-++.+++.++..++.+...
T Consensus 347 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 347 LGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 9888865 55777777777666555554443
No 198
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.93 E-value=1.1e-08 Score=110.58 Aligned_cols=176 Identities=15% Similarity=0.101 Sum_probs=149.6
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccC--chhhHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVG--RYPMIGFGCITY 103 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~G--rr~~~~~~~~~~ 103 (581)
+..+.+.+...+..++++....+++.|.. ..+++.++++.++++..+...++.++.|+++|+ .. ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHH
Confidence 34566667777788888888888888887 899999999999999999999999999999999 46 445555666666
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 104 LLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
.++...++++. +++.++..-++.|+..|...+.....+.|..+. ++...+
T Consensus 376 gl~~~~~p~~~-----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~-------~~l~~a 425 (509)
T KOG2504|consen 376 GLARLFLPFAT-----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGL-------EKLSNA 425 (509)
T ss_pred HHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh-------hhcchH
Confidence 66777777777 778888899999999999999888899999988 669999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhcccc-chhhhHHHHHHHHHHHHHHHhcC
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQDNLG-WKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
+|+......++..+||++.|++.|..| |...|+.+++..+++...+++..
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999998877 99999999998888876655544
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.91 E-value=4.7e-08 Score=102.15 Aligned_cols=166 Identities=13% Similarity=-0.017 Sum_probs=115.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCch---hhHHH-HHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRY---PMIGF-GCI 101 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr---~~~~~-~~~ 101 (581)
|.++.+.+..++....+|++..|+|.|++ +.|++.. .+....+..+... +..++++|| +.|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~-~~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGL---IGVAVIPDR-VARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHH---HHHHHhhHH-hhhhhhHHHHHHHHHH
Confidence 45677778888889999999999999996 4678764 5555555554444 445788888 5543 33332 333
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQ 181 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (581)
+.++......+.. +....++...+.+++.....+..+++.+|.+|+ +.|+
T Consensus 266 ~~a~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-------~~rg 315 (368)
T TIGR00903 266 LIAAFFLALAFEL-----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK-------ELHG 315 (368)
T ss_pred HHHHHHHHHHHcc-----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch-------hhcC
Confidence 3333333333332 223334455666777777778888999999999 6799
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 182 SYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 182 ~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
++.++.+...++|+.++|.+.+.+.. |.+..|.+.++..+++.+..
T Consensus 316 t~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 316 KAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887764 66667777777666665554
No 200
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.91 E-value=1.5e-06 Score=87.59 Aligned_cols=149 Identities=16% Similarity=0.115 Sum_probs=106.0
Q ss_pred hhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccc
Q 039943 55 GEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESA 134 (581)
Q Consensus 55 ~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (581)
+++|++..|.+.+...-....++..++.|.++|| +|||+..+..++++.++.+.- ..+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k-~~~-------------------- 119 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTK-HSS-------------------- 119 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH-hcc--------------------
Confidence 5799999999999999999999999999999999 699999999988888776532 223
Q ss_pred cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH-HHHhhHHHHHHHHHHhhhccccc--
Q 039943 135 TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY-VSVLASSMVAVTCIVYIQDNLGW-- 211 (581)
Q Consensus 135 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~~~~~i~~~~g~-- 211 (581)
++..++++|++-|++.....++..+.......+.+-++ +..+..++... ....+-++++.+++-++.+..+.
T Consensus 120 ---~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~--~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 120 ---NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ--EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 68899999999999999999988877554443322110 23344443322 12223334444445555555544
Q ss_pred hhhhHHHHHHHHHHHHHHH
Q 039943 212 KVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 212 ~~~f~~~~~~~~i~~~~~~ 230 (581)
..+|..+.+..+++.+...
T Consensus 195 vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 7788888887777665544
No 201
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.89 E-value=2.4e-08 Score=103.84 Aligned_cols=144 Identities=11% Similarity=0.047 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHH-HHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWT-AATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~-~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
++.+.+..++..+.++....+++.|+++ +|++.++.+.+..+.. ++..++.+++|++.|| +|||+.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHH
Confidence 5555566666778888888999999986 9999999998887766 5678999999999999 79999998888887776
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
..+..+..+.... .+-+..+.+.++...++.+++.+...+...+++.|.+|+ ++|++.+++
T Consensus 289 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~ 349 (356)
T TIGR00901 289 NAGFVWLASNGHH------------DGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP-------KFGATQMAL 349 (356)
T ss_pred HHHHHHHHhcCcc------------cccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-------CccHHHHHH
Confidence 6555443200000 000001446677778888999999999999999999998 679999999
Q ss_pred HHHHHh
Q 039943 187 YYVSVL 192 (581)
Q Consensus 187 ~~~~~~ 192 (581)
++...+
T Consensus 350 ~~~~~~ 355 (356)
T TIGR00901 350 LSSLSA 355 (356)
T ss_pred HHHHHh
Confidence 877654
No 202
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.1e-07 Score=95.18 Aligned_cols=169 Identities=14% Similarity=0.110 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
-|.+.+-.-+.++.+|.++.|+|.++. +.|+|..++|++.+..++......+..-.+++|.-.+|+........+.+|.
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~ 288 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGL 288 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 466666666789999999999999997 6799999999999999999999999999999975567888888888999999
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
..+.+.+. +.. +...+++|+|.|+..|...+++.+..++. ++-++..++.
T Consensus 289 ~G~~~~P~----------------------~~~--~lw~~llG~G~G~~F~laL~li~~rs~~a------~~Aa~LSgma 338 (395)
T COG2807 289 VGLLLAPG----------------------QLP--ILWALLLGLGQGGAFPLALTLILLRSSDA------AIAAALSGMA 338 (395)
T ss_pred HHHHHhhh----------------------hHH--HHHHHHHhCccchHHHHHHHHHHhhcCCh------HHHHHHHHHh
Confidence 98888761 111 12258999999999999999999987663 3466666666
Q ss_pred HHHHhhHHHHHHHHHHhhhccc-cchhhhHHHHHHHHHHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDNL-GWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~-g~~~~f~~~~~~~~i~~~ 227 (581)
+....+=+++||.+.|++.|.. +|+..+..-+.+.++..+
T Consensus 339 Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 339 QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 6666777888999999999875 588776665555444433
No 203
>TIGR00898 2A0119 cation transport protein.
Probab=98.87 E-value=2.7e-08 Score=108.67 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHH
Q 039943 68 LLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALG 147 (581)
Q Consensus 68 ~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (581)
.....+...++.++.+++.|| +|||+++.++.++.+++.+++.+.++ ...+..+...+
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~---------------------~~~~~~~~~~~ 418 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPV---------------------DLYFLRTALAV 418 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCC---------------------CchHHHHHHHH
Confidence 345566777888999999999 79999999998888887777766541 01233444445
Q ss_pred HHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHH
Q 039943 148 LMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 148 l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~ 227 (581)
+.+++.+...+...++.+|.+|+ +.|+++.++.+....+|+.++|.+.+ +. ..++..++.+.++..+++.+
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPT-------VVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccH-------HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHH
Confidence 56666667778888999999998 77999999999999999999999988 43 35566677777666665555
Q ss_pred HHHh
Q 039943 228 SFFL 231 (581)
Q Consensus 228 ~~~~ 231 (581)
...+
T Consensus 490 ~~~~ 493 (505)
T TIGR00898 490 LTLF 493 (505)
T ss_pred HHHc
Confidence 4443
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.86 E-value=1.5e-08 Score=104.51 Aligned_cols=141 Identities=16% Similarity=0.126 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhhcCCc-chhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHH
Q 039943 31 IIANEAFERMASMGLMPNMILYLCGEYNME-TTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVL 109 (581)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 109 (581)
.+...+...+.++....++|.|+.+++|++ ..+.+.+.++..+...++.++.|+++|| +|+|+..........++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHH
Confidence 445555555677778899999989999999 7999999999999999999999999999 79988888887777777666
Q ss_pred HHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHH
Q 039943 110 LWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYV 189 (581)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (581)
+.+... ..+....+...++.|++.+...+...+++.|..|+ ++|+++.++.+.
T Consensus 290 ~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~ 342 (352)
T PF07690_consen 290 LLLLPF--------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPP-------EYRGTAFGLFNS 342 (352)
T ss_dssp HCCSHH--------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT-------CHHHHHHHHHHH
T ss_pred HHHHHH--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHH
Confidence 665541 11456666678889999999999999999999988 679999999999
Q ss_pred HHhhHHHHHH
Q 039943 190 SVLASSMVAV 199 (581)
Q Consensus 190 ~~~~g~~~~p 199 (581)
..++|..+||
T Consensus 343 ~~~~~~~igP 352 (352)
T PF07690_consen 343 IGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHCC
Confidence 9999999987
No 205
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.86 E-value=7.3e-08 Score=101.58 Aligned_cols=141 Identities=7% Similarity=-0.011 Sum_probs=91.8
Q ss_pred hhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 039943 44 GLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPA 123 (581)
Q Consensus 44 ~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (581)
....+.+.|+++++|++..+.+.+.....+...++.++.|++.|| +|||+++.++.++..++.+.+.+..
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 290 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLALSP--------- 290 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 344556777888899999999999999999999999999999999 7999999999988888887777665
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 124 CDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
+....+....+.+.|.+...+.. ...+..|.++ +-+.+.+ ...++..+++.+++
T Consensus 291 --------------~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~------~~g~~~~----~~~~~~~~g~~~~~ 344 (392)
T PRK10473 291 --------------SHAVSLFGITLICAGFSVGFGVA--MSQALGPFSL------RAGVASS----TLGIAQVCGSSLWI 344 (392)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcc------cccHHHH----HHHHHHHHHHHHHH
Confidence 22233333333333333333222 2233344321 1222332 33456666677777
Q ss_pred hhhccccchhhhHHHHH
Q 039943 204 YIQDNLGWKVGFGVPAV 220 (581)
Q Consensus 204 ~i~~~~g~~~~f~~~~~ 220 (581)
++.+..|+.....+.+.
T Consensus 345 ~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 345 WLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHhccchhHHHHHH
Confidence 77776676654444433
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.79 E-value=9.4e-08 Score=103.52 Aligned_cols=166 Identities=17% Similarity=0.069 Sum_probs=116.4
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
|.++.++...++..+..+......+.|.+...+ +....+++..+..++..++.++.++++|| +|+|+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHH
Confidence 445555556666666655555555544443333 55666677777778889999999999999 7999999988887776
Q ss_pred HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 106 GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
+.+...+..-. .+.+.+.+++.-++.|++.+...+...++++|..+..+....++..+..++
T Consensus 309 ~~~~~~~~~~~------------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 309 SCGVLLLMGLA------------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHhcc------------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 66554432100 011455666777888999999999999999999764321111145666888
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccc
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGW 211 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~ 211 (581)
...+...+|.++++.+.|++.+..||
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88889999999999999998776665
No 207
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=1.3e-07 Score=94.32 Aligned_cols=170 Identities=12% Similarity=0.043 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhh--cCCc----chhhH-------------HHHHHHHHHHHHHHHHHHHhhcc
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGE--YNME----TTAGT-------------NVLLIWTAATNFLPIIGAFLADS 88 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s----~~~~~-------------~i~~~~~~~~~i~~~~~G~laDr 88 (581)
.+.+....|.+.+.+||++-......+.+ ++.. +++.. .=..+..++-+-|.++.+++.||
T Consensus 328 tlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver 407 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER 407 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH
Confidence 34555667778999999776554443321 1110 11111 11345566777889999999999
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhcc
Q 039943 89 CVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQL 168 (581)
Q Consensus 89 ~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~ 168 (581)
+|||+++..+++++.+..+++..+.+- + ..-.+++.+|+....+. .+.+.|..|.+
T Consensus 408 -lGRKkTMal~l~~f~iflfll~~c~~r------------------n-~~tvllf~arafisg~f----qvaYvYtPEVy 463 (528)
T KOG0253|consen 408 -LGRKKTMALSLILFGIFLFLLTTCKTR------------------N-AYTVLLFTARAFISGAF----QVAYVYTPEVY 463 (528)
T ss_pred -hcchhHHHHHHHHHHHHHHHHHHhcCc------------------c-hhHHHHHHHHHHHhchh----eEEEEecCccc
Confidence 799999999999999988877776510 0 12345667777765443 45788999999
Q ss_pred CCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 169 EKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 169 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
|. ..|+.+.|....+..+|+++.|.++ +....+-..+..+...+.+++.+...
T Consensus 464 PT-------avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 464 PT-------AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVC 516 (528)
T ss_pred ch-------hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHhe
Confidence 99 7799999999999999999999887 33333333444555555555554433
No 208
>PRK09669 putative symporter YagG; Provisional
Probab=98.74 E-value=1.8e-07 Score=100.50 Aligned_cols=129 Identities=10% Similarity=0.098 Sum_probs=96.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHH
Q 039943 62 TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLML 141 (581)
Q Consensus 62 ~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (581)
...+.+.....+...++.++.++++|| +|+|+.+..+.++.+++.....+.. +.+.+.
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 321 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFIP---------------------PSNVWL 321 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhC---------------------cchHHH
Confidence 334455566667778889999999999 7999999988776665443333322 115666
Q ss_pred HHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccch
Q 039943 142 LYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWK 212 (581)
Q Consensus 142 ~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~ 212 (581)
+++..++.|++.+...+...++++|..+..+....++..+..++....+..+|.++|+.++|++.+..||.
T Consensus 322 ~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 322 IFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 77778899999999999999999998874332111144567788888899999999999999988777763
No 209
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.71 E-value=7.3e-07 Score=93.29 Aligned_cols=147 Identities=11% Similarity=0.014 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
+...+..++.....+....+.+.++.+.+|++..+.+++..+..++..++.++.|++.|| +|||+++..+..+..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHH
Confidence 333344444444555556667778888899999999999999999999999999999999 7999999988876544333
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
........ +.+.+.+.++..+.+.+.+...+.....+.|..| +.+++..+..+
T Consensus 276 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~ 328 (377)
T PRK11102 276 WLVVSALL-------------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP--------HMAGTASSLAG 328 (377)
T ss_pred HHHHHHHH-------------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc--------ccchHHHHHHH
Confidence 22222100 0133444444445555555555566666666655 24777777765
Q ss_pred HH-HhhHHHHHHHHHH
Q 039943 189 VS-VLASSMVAVTCIV 203 (581)
Q Consensus 189 ~~-~~~g~~~~p~~~~ 203 (581)
.. ..+|..+++++++
T Consensus 329 ~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 329 TLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 43 3466777765544
No 210
>PRK11043 putative transporter; Provisional
Probab=98.70 E-value=9.7e-07 Score=93.34 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=106.4
Q ss_pred HHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhc
Q 039943 37 FERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTIL 116 (581)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 116 (581)
+....++....+.|.|++ ++|++..+.++......++..++.++.+++.|| +|+|+++....+...++.+.+.+....
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445556677787775 589999999998888888889999999999999 799998776666655554433332200
Q ss_pred ccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHH
Q 039943 117 SQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSM 196 (581)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 196 (581)
. ..+...++....+.|++.+...|...+...|..|+ .++++.++++.....++.
T Consensus 292 ~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~g~~~~~~~~~~~ 345 (401)
T PRK11043 292 S------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ--------ATGKAAALQNTLQLGLCF 345 (401)
T ss_pred c------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc--------cChHHHHHHHHHHHHHHH
Confidence 0 01344455566778888888888888877776653 489999999888788888
Q ss_pred HHHHHHHhhhccccchh
Q 039943 197 VAVTCIVYIQDNLGWKV 213 (581)
Q Consensus 197 ~~p~~~~~i~~~~g~~~ 213 (581)
+++.+.|.+.+......
T Consensus 346 ~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 346 LASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHccCCChhHH
Confidence 88888888876443333
No 211
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.69 E-value=6.8e-07 Score=94.13 Aligned_cols=178 Identities=11% Similarity=0.001 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
++..++..++.....-....+...|+++.-|.+....+.+.++..++-.+.....+++-.| +|-|+++.++.+.+++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 3444445555555555566778889875444788888888888888888888999999999 799999999999999877
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.+.+..++. .+......+.+..++|+..|....+...++.+..|+ +.|+++-+++
T Consensus 288 ~l~a~~~~~------------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~-------~~~at~Q~l~ 342 (400)
T PF03825_consen 288 LLYAYFSDP------------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP-------ELRATAQGLY 342 (400)
T ss_pred HHHHHhcCC------------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc-------cchHHHHHHH
Confidence 777776310 001123344456679999999999999999999999 6799999988
Q ss_pred HHH-HhhHHHHHHHHHHhhhccccchh------hhHHHHHHHHHHHHHHHh
Q 039943 188 YVS-VLASSMVAVTCIVYIQDNLGWKV------GFGVPAVISLLSALSFFL 231 (581)
Q Consensus 188 ~~~-~~~g~~~~p~~~~~i~~~~g~~~------~f~~~~~~~~i~~~~~~~ 231 (581)
... ..+|..+|..++|++.|++|-+. .+.+++++.++..+.+.+
T Consensus 343 ~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 343 SALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 865 57999999999999999876443 444555544444444443
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.65 E-value=7.7e-07 Score=94.48 Aligned_cols=164 Identities=10% Similarity=-0.055 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhh-cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGE-YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
++...+..++......+..++++.|+.+. .+.+...++...+.+.....++.+++|+++|| +++|+++.++.++.++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHH
Confidence 33334444444444445668888898642 24455555666777778889999999999999 79999998888887777
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
.++..+.+ +.. .....++.|+..+..+|...++..+..++ +.......+
T Consensus 313 ~ll~~~~~-----------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~-------~~~~~s~~l 361 (410)
T TIGR00885 313 CLGSIFAG-----------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQ-------DTKYGAAGL 361 (410)
T ss_pred HHHHHHcC-----------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------hhhhhHHHH
Confidence 77777654 222 24556778888888889999999998876 222222222
Q ss_pred HHHHHhhHHHHHHHHHHhhhccc------cchhhhHHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNL------GWKVGFGVPAVISLLS 225 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~------g~~~~f~~~~~~~~i~ 225 (581)
. ...+|+++.|.+.|++.|.. +.+..|+++.++.+..
T Consensus 362 -~-~~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 362 -V-MAIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred -H-HHHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 2 23499999999999999953 5788888877665443
No 213
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.62 E-value=1.9e-06 Score=91.44 Aligned_cols=186 Identities=13% Similarity=0.052 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+...+...+...+..--...+....+-++-|++..++.+++........++.+++.++.|| +|||++++.+..+..+..
T Consensus 271 ~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~ 349 (485)
T KOG0569|consen 271 LLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVAL 349 (485)
T ss_pred HHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHH
Confidence 4444445555555543334444444445789999999999999999999999999999999 799999999999888877
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccc-cchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGG-IRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
+++......... .+++-....+++.++..+..+. ..|..+-+.+|++|+ +.|..+.++
T Consensus 350 ~~~~~~~~l~~~--------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~-------~~R~aa~s~ 408 (485)
T KOG0569|consen 350 LLMSIALFLSNS--------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQ-------SARSAAQSV 408 (485)
T ss_pred HHHHHHHHHHHH--------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCc-------cchHHHHHH
Confidence 776665422110 0000011223333333333322 257888999999999 558888888
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCcc
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPFY 236 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~ 236 (581)
......+...+-......+.+..|- ..|.+..+...+..+..+...|+.
T Consensus 409 ~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 409 ATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 7777766666666566666666664 566666666555555555544543
No 214
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.62 E-value=2e-07 Score=97.02 Aligned_cols=139 Identities=9% Similarity=0.055 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
.+...+..++.....+++..+.+.|+++.+|++..+++.+.++..+...++.+++|+++|| +|||+.+..+..+...+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHH
Confidence 3444444455555666778889999999999999999999999999999999999999999 799998888877766666
Q ss_pred HHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
.++.+... ++.+...+.....+.+++.|...+...++++|.+|. ++++..++.
T Consensus 306 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~g~~~g~~ 358 (366)
T TIGR00886 306 FLVVLGLV-------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR--------ATGAVSGLV 358 (366)
T ss_pred HHHHhcCC-------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh--------hcccHHHHH
Confidence 65554330 000344444455555566666666777778887763 589999988
Q ss_pred HHHHhhH
Q 039943 188 YVSVLAS 194 (581)
Q Consensus 188 ~~~~~~g 194 (581)
+...++|
T Consensus 359 ~~~~~~g 365 (366)
T TIGR00886 359 GAIGNLG 365 (366)
T ss_pred HHhccCC
Confidence 7776665
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.61 E-value=1.3e-06 Score=90.86 Aligned_cols=175 Identities=9% Similarity=0.062 Sum_probs=134.5
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcC---CcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYN---METTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
|.+|.+.+........++..-...+.|.+..++ .++...|.+.++-.+.-++...+..++.+| +|.|+.++++.++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHH
Confidence 344544444333334444444456677765433 455667888888888999999999999999 7999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
+.+=.+++++++ +++.+.....+.|+-.+........++++.+|+ +..++
T Consensus 299 ~~iRi~~~~~~~-----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~-------rlsAt 348 (412)
T PF01306_consen 299 MAIRIIGSGFAT-----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDK-------RLSAT 348 (412)
T ss_dssp HHHHHHHHHT-------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-G-------GGHHH
T ss_pred HHHHHHHHhhhc-----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hHHHH
Confidence 999999999988 788899999999999999999999999999998 66777
Q ss_pred HHHHH-HHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 183 YFSWY-YVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 183 ~~~~~-~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+.+. ..+..+|..+.+.++|++.|+.|++..|++.+.+.+...++..+
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 88775 46778999999999999999999999998877766555444443
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.59 E-value=3.3e-07 Score=95.80 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=94.7
Q ss_pred hHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhh
Q 039943 394 PIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMI 473 (581)
Q Consensus 394 ~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 473 (581)
++.+|+|+- +++..|+...++=++.+... .+.|..++.-++.++..++...
T Consensus 428 klI~kiGHv-------~v~~lgLa~~~~Rf~~~S~L----------------------~n~W~vLPieilqgit~aliWa 478 (618)
T KOG3762|consen 428 KLIEKIGHV-------NVMYLGLACNVGRFLYYSYL----------------------QNPWMVLPIEILQGITHALIWA 478 (618)
T ss_pred HHHHHhccc-------ceeeehhhHHHHHHHHHHHh----------------------cCchheeeHHHHHHHHHHHHHH
Confidence 466676555 47778887777777766654 3677788888999999999999
Q ss_pred hhheeecccCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHH
Q 039943 474 GQIEFYYSELPRSMSSIASALHG-LGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIY 552 (581)
Q Consensus 474 ~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~ 552 (581)
+..+|+...+|++++.+++++.. ....+|-.+|+.+.+.+.... +....|.++++.|++.++.
T Consensus 479 a~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f----------------g~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 479 AIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF----------------GARTTFRIFGIACLVTLAL 542 (618)
T ss_pred HHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee----------------hhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999874 445578888888888776543 2356788888888877777
Q ss_pred Hhhhhcccccc
Q 039943 553 FLACCKAYGPC 563 (581)
Q Consensus 553 ~~~~~~~~~~~ 563 (581)
+..+-+..+++
T Consensus 543 ~~~iq~~l~~~ 553 (618)
T KOG3762|consen 543 FISIQLLLKRR 553 (618)
T ss_pred HHHhhhhhccc
Confidence 66665544443
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.55 E-value=1.7e-06 Score=90.99 Aligned_cols=161 Identities=16% Similarity=0.101 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
...++..++...++....+.+..|.+..+|.++.+..+.......+..++.++..++++| +|+|+++.++.++.+++.+
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHH
Confidence 344445555555555555666667777788888888888888888888889999999999 7999999999999999999
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
+..+.+ ..+..++++..++.++|.+...+..+++++|..+-+|-...++.-|..++...
T Consensus 318 ~~~f~~---------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~t 376 (467)
T COG2211 318 LLYFTP---------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMT 376 (467)
T ss_pred HHHhhc---------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHH
Confidence 888876 22688888999999999999999999999998765443333245566667777
Q ss_pred HHHhhHHHHHHHHHHhhhccccc
Q 039943 189 VSVLASSMVAVTCIVYIQDNLGW 211 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~~g~ 211 (581)
...-+|.+++..+.|++....||
T Consensus 377 F~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 377 FFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 77778888888888887655443
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.54 E-value=1.2e-06 Score=93.77 Aligned_cols=176 Identities=13% Similarity=0.073 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCc--------hhhHH-
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGR--------YPMIG- 97 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Gr--------r~~~~- 97 (581)
.+|.+.+..++.+++++.+..++|.|+.+.+|++..+.|+..++-.+.+.+..+++|.++|| .-+ ||++-
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~-l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR-LTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhhccCchHhHHHHHHh
Confidence 35788899999999999999999999999999999999999999999999999999999999 444 22222
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccc
Q 039943 98 FGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSK 177 (581)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (581)
++....++..+.+++.+. .........+.++..+.|+..+++. .-..|..|
T Consensus 338 i~~~~~ai~l~~l~~~~~-----------------~~~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~ap-------- 388 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSD-----------------EHRLLAVILLTIAIGLSGFNISGFY----KNHQDIAP-------- 388 (466)
T ss_pred HHHHHHHHHHHeeeecCC-----------------CcchHHHHHHHHHHHHcccchhhhH----hhhhhccc--------
Confidence 222223333333333330 0011233334444444444444432 22222222
Q ss_pred hhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc---ccchhhhHHHHHHHHHHHHHHHhc
Q 039943 178 GALQSYFSWYYVSVLASSMVAVTCIVYIQDN---LGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 178 ~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~---~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
+.-+..+++.+...++.+.++|.+.+.+..+ ..|+++|++.+++.+++-+++.+.
T Consensus 389 q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 389 QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 4678889999999999999999999998843 379999999999888877665544
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.52 E-value=4.4e-06 Score=88.10 Aligned_cols=138 Identities=10% Similarity=0.023 Sum_probs=98.1
Q ss_pred hhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 039943 46 MPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACD 125 (581)
Q Consensus 46 ~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (581)
....+.|+++.+|++..+.+++.....++..++.++.+++.|| ++++... +.....++.+........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~--------- 294 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTLMWQ--SVICCLLAGLLMWIPGWF--------- 294 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHh---------
Confidence 3445667877799999999999888888888999999999999 5733322 222222222222111100
Q ss_pred ccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhh
Q 039943 126 QLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYI 205 (581)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i 205 (581)
...+.+.++...++.+++.+...|...++..|.+|+ .++...++.+...++|..+++.+++++
T Consensus 295 ---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 295 ---------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY--------LAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--------cchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 011445677778889999999999999998888764 478888888888899999999999988
Q ss_pred hccccch
Q 039943 206 QDNLGWK 212 (581)
Q Consensus 206 ~~~~g~~ 212 (581)
.+...+.
T Consensus 358 ~~~~~~~ 364 (394)
T PRK11652 358 PQTGQFS 364 (394)
T ss_pred cCCchHH
Confidence 6654443
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.52 E-value=2.6e-06 Score=92.24 Aligned_cols=183 Identities=8% Similarity=0.028 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchh----hHHHHHHHHHHHHHHHHHHHH----hhccccCchhhH--HHH
Q 039943 30 FIIANEAFERMASMGLMPNMILYLCGEYNMETTA----GTNVLLIWTAATNFLPIIGAF----LADSCVGRYPMI--GFG 99 (581)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~----~~~i~~~~~~~~~i~~~~~G~----laDr~~Grr~~~--~~~ 99 (581)
.+++...+..+.+.-..+.++.|.++..+.+... .+++.++..+...+.+++..+ +.||..+.+... .+|
T Consensus 276 ~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G 355 (475)
T TIGR00924 276 VLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLG 355 (475)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Confidence 3344444555555556666777776654443222 667778787877777777554 455411223333 678
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchh
Q 039943 100 CITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGA 179 (581)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (581)
.++.+++...+++...... .....+.+++....++.++|+....|...+++.+..|+ +.
T Consensus 356 ~~l~~~~~~~~~~~~~~~~--------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~-------~~ 414 (475)
T TIGR00924 356 MLFCGASFLTFAASIWFAD--------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ-------RL 414 (475)
T ss_pred HHHHHHHHHHHHHHHhhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH-------HH
Confidence 8888888777766431110 00123788899999999999999999999999999998 77
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcC
Q 039943 180 LQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLAS 233 (581)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (581)
|++.++++.....+|..+++.+.....+..+|...|...++..++..+++.+..
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888777777888888777776665555554433
No 221
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.46 E-value=0.00013 Score=76.95 Aligned_cols=102 Identities=11% Similarity=0.103 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHH
Q 039943 68 LLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALG 147 (581)
Q Consensus 68 ~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (581)
..+......++.++++.+.|+ +|.|..+.++...+..-.+...+. |-+.++.+-.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~------------------------N~y~~yfssa 110 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP------------------------NSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc------------------------chHHHHHHHH
Confidence 667777888899999999999 799999999998888766665554 4577888999
Q ss_pred HHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 148 LMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 148 l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
+.|+|.+..+...-.+++|..++ +.+.+-.++.......+..+|.+.
T Consensus 111 llG~Gaallw~GqG~ylt~~st~-------~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTR-------ETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred HhhhhHHheecccceehhhcCCh-------hhHHHHHHHHHHHHHHHHHhhhHh
Confidence 99999999999999999998877 567777777666666666665443
No 222
>PRK11462 putative transporter; Provisional
Probab=98.43 E-value=1.6e-05 Score=85.81 Aligned_cols=128 Identities=6% Similarity=0.014 Sum_probs=84.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHH
Q 039943 62 TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLML 141 (581)
Q Consensus 62 ~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (581)
...+.+..++.++..++.+++++++|| +|+|+++..+.++.++..++..+.+ ..+...
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 320 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAMFFVP---------------------MQASIT 320 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhc---------------------hhHHHH
Confidence 344567778888889999999999999 7999988766554444333333322 012223
Q ss_pred HHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccc
Q 039943 142 LYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGW 211 (581)
Q Consensus 142 ~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~ 211 (581)
+++..++.|++.+...+...++++|..+..+-...++.-+..++.......+|.++++.++|++.+..||
T Consensus 321 ~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 321 MFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444566787777777777888888766322111103334556777778889999999998887765555
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.38 E-value=1.5e-05 Score=81.89 Aligned_cols=165 Identities=17% Similarity=0.204 Sum_probs=132.1
Q ss_pred HHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcc
Q 039943 38 ERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILS 117 (581)
Q Consensus 38 ~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 117 (581)
..++++.--..+=||-.+.||++..|...++..+..+..++....|++..|..+++++..+++.+.+++..+..++..
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~-- 297 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP-- 297 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh--
Confidence 344444333555677788999999999999999999999999999999885478899999999998888888777762
Q ss_pred cCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHH
Q 039943 118 QAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMV 197 (581)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 197 (581)
..+.+.+..+.+++|++.|.+.....+...|...+ ++-+...+.....+.+...+
T Consensus 298 ------------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~-------~~aG~~mG~WGaaQA~A~Gl 352 (403)
T PF03209_consen 298 ------------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSA-------GRAGLFMGAWGAAQAIARGL 352 (403)
T ss_pred ------------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCC-------cchhHHHHHHHHHHHHHHHH
Confidence 22678899999999999999999999999998877 45788899998888888888
Q ss_pred HHHHHHhhhcc----------ccchhhhHHHHHHHHHHHHHH
Q 039943 198 AVTCIVYIQDN----------LGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 198 ~p~~~~~i~~~----------~g~~~~f~~~~~~~~i~~~~~ 229 (581)
|-.++|.+.|- .+|..+|.+-++.+++++.+.
T Consensus 353 g~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 353 GTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88888876542 346677777777666665543
No 224
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.38 E-value=1.7e-05 Score=78.79 Aligned_cols=147 Identities=20% Similarity=0.260 Sum_probs=112.5
Q ss_pred hHHHHHhhhhcCCcc--hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 47 PNMILYLCGEYNMET--TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 47 ~~l~~yl~~~~~~s~--~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
...+.+. .+++.+. .+.+++.+.+.+...++.++.|+++|| +|||+.+..+.....++.+++.+..+
T Consensus 23 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 3344333 4555555 578999999999999999999999999 59998888888776666666666651
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHH-HHhhHHHHHHHHHH
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYV-SVLASSMVAVTCIV 203 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~~~~ 203 (581)
.+...++..|...|++.+...+...+++.|.+|+ . +.|+...+.... ...+|..++|.+++
T Consensus 92 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 92 ------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-----TERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred ------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2578889999999999999999999999999886 2 358888888777 57788888887777
Q ss_pred hhhcc--ccchhhhHHHHHHH
Q 039943 204 YIQDN--LGWKVGFGVPAVIS 222 (581)
Q Consensus 204 ~i~~~--~g~~~~f~~~~~~~ 222 (581)
.+... .+|++.|.+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 154 LLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHH
Confidence 66543 57888665555443
No 225
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.37 E-value=1.5e-05 Score=84.67 Aligned_cols=170 Identities=16% Similarity=0.046 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG 106 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 106 (581)
.++...+..++....++......|.++++.+|++..+.++.......+..++..+.+++.++ .++++.......+..++
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ig 297 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHH
Confidence 45555555566666667777778899998899999999999888888888888888876654 24545443333344444
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
..++....-.. ..+...++++.++.++|.+...|+.....- .+.. ..++++.++
T Consensus 298 ~~l~~~~~~~~------------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~------~~~G~a~a~ 351 (413)
T PRK15403 298 LALLIVGNLLW------------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNN------LPKGTVSAS 351 (413)
T ss_pred HHHHHHHHHHc------------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCC------CCCcHHHHH
Confidence 43333321000 013334567888889998888888875332 2222 136777777
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLL 224 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i 224 (581)
++.....+..+++...+++.+. +-.+.|.+..++..+
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 352 LNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 7777777888888888888664 445666655554433
No 226
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.33 E-value=9.5e-06 Score=71.10 Aligned_cols=120 Identities=18% Similarity=0.298 Sum_probs=87.4
Q ss_pred hHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhh
Q 039943 394 PIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMI 473 (581)
Q Consensus 394 ~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 473 (581)
++.||+++| +.+..+..+..++.+..... .+.+......++.+++.....+
T Consensus 20 ~~~d~~g~~-------~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~ 70 (141)
T TIGR00880 20 LLTDRFGRK-------PVLLVGLFIFVLSTAMFALS----------------------SNITVLIIARFLQGFGAAFALV 70 (141)
T ss_pred HHHhhcchh-------HHHHHHHHHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHH
Confidence 355665544 45666666666665544332 1445556667888888888888
Q ss_pred hhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 039943 474 GQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYF 553 (581)
Q Consensus 474 ~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~ 553 (581)
....++.|..|++.|++..++.+....++..+++.+.+.+.+.. + ++..|++.+.+.++..+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 71 AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------G----------WRAPFLFLAILALAAFILL 134 (141)
T ss_pred hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------c----------hHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999988776432 2 3567777777777777666
Q ss_pred hhhhc
Q 039943 554 LACCK 558 (581)
Q Consensus 554 ~~~~~ 558 (581)
+++.+
T Consensus 135 ~~~~~ 139 (141)
T TIGR00880 135 AFLLP 139 (141)
T ss_pred hhcCC
Confidence 65544
No 227
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.32 E-value=1.7e-05 Score=77.36 Aligned_cols=133 Identities=14% Similarity=0.068 Sum_probs=100.4
Q ss_pred HHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccc
Q 039943 49 MILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLR 128 (581)
Q Consensus 49 l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (581)
..+.+++.+|+|.+|...+-..-.++..++ ++.|.+.|+ +|.+.++.+|.+...+|..+++++-.-
T Consensus 24 yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~~l~~~~------------ 89 (250)
T PF06813_consen 24 YSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDR-FGPWVVLLIGAVLGFVGYGLLWLAVSG------------ 89 (250)
T ss_pred hhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 345678899999999999999999999886 888999999 699999999999999999888887510
Q ss_pred cccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 129 SDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
.....+++.+++...+.|.+.+...........+.||. .||.+.++.-....+++.+-..+...+.+
T Consensus 90 ----~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~--------~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 ----RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR--------SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ----ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc--------ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 01123567777777777777666655555556688985 48999998877777766655444443433
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.23 E-value=1.6e-06 Score=87.68 Aligned_cols=176 Identities=13% Similarity=0.032 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccC--chhhHHHHHHHHHHHHH
Q 039943 31 IIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVG--RYPMIGFGCITYLLGVV 108 (581)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~G--rr~~~~~~~~~~~~~~~ 108 (581)
..+..-+.+++....-+.++.++.+.+..+.-+.|+...-..+.+.++..+.|.++|| ++ |-.....++++......
T Consensus 275 ~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k-~~~~~wl~~~~gl~~~G~~~~ 353 (464)
T KOG3764|consen 275 IAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADK-YPHLRWLLSLGGLATVGVSSG 353 (464)
T ss_pred hhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHh-cCchhHHHHHHHHHHHHHHhc
Confidence 3333334444444455667788888888556588988888999999999999999999 69 54444455555555555
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
...++. ++..+++-+...+++.+...+.......+........+- +..++.+++..
T Consensus 354 ~iP~~~-----------------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~-~vYGsVyaIad 409 (464)
T KOG3764|consen 354 PIPFAT-----------------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGF-NVYGSVYAIAD 409 (464)
T ss_pred hhHhhh-----------------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcccc-ceeeeHHHHHH
Confidence 555666 667788888888888877777666666666655332111 26889999999
Q ss_pred HHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHh
Q 039943 189 VSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 189 ~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+..+|..+||.++|.+.+..|++|.-.+.++..++..-++.+
T Consensus 410 ~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 410 AAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999877777766555444433
No 229
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.22 E-value=7.8e-06 Score=84.26 Aligned_cols=165 Identities=12% Similarity=0.085 Sum_probs=123.3
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCchhhHHHH-HH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGRYPMIGFG-CI 101 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Grr~~~~~~-~~ 101 (581)
+.+..+....+--.+++..=.+++++|++ .+|++....+.+-.+--+...+.+|+.|..+||| |||||-++.. .+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 45555555556666666666788999996 7899999999999999999999999999999986 7887666555 44
Q ss_pred HHHHHHHHHHHhhhcccCCCCccccccccccc--ccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchh
Q 039943 102 TYLLGVVLLWLTTILSQAQPPACDQLRSDCES--ATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGA 179 (581)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (581)
...++..++..+.+..-. ..|++. ..+.....++++.-+.=++.-..+..+-++++|+....++ ++
T Consensus 111 ~i~~~l~Lig~aaDig~~--------lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~----~~ 178 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLL--------LGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK----KT 178 (498)
T ss_pred HHHHHHhhhhhHhhhhHH--------hcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh----hh
Confidence 566677777777633221 111111 2335677788888888888888889999999999876543 33
Q ss_pred hhHHHHHHHHHHhhHHHHHHHHHHhh
Q 039943 180 LQSYFSWYYVSVLASSMVAVTCIVYI 205 (581)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~p~~~~~i 205 (581)
| +.+++...+.+|..+|..++++.
T Consensus 179 ~--Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 179 R--ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred c--cchhHHHHHHhcceeeeeccccc
Confidence 3 88888889999999999887754
No 230
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.20 E-value=4.5e-07 Score=93.49 Aligned_cols=148 Identities=13% Similarity=0.119 Sum_probs=116.2
Q ss_pred cccchhhHHHHHHhhhccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccc
Q 039943 372 SFGIFTIITVILWIGFYDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVK 451 (581)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 451 (581)
.++..-.+...++.|+.+. +.+|+.|+ +++..|..+..++.+.-+..
T Consensus 72 ll~~vf~v~~~i~sPl~gy----LadryNR~-------~v~~vG~~iW~~Av~~~~fs---------------------- 118 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGY----LADRYNRK-------RVIAVGIFIWTLAVFASGFS---------------------- 118 (493)
T ss_pred chhHHHHHHHHHHHHHHHH----HHhhcCcc-------eEEeeHHHHHHHHHHHHHHH----------------------
Confidence 3444445555666676554 67776555 68999999998888877663
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCC
Q 039943 452 MSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNIN 531 (581)
Q Consensus 452 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~ 531 (581)
-++|.+.+.-.+.|+||+...|..+.++.+.+|..+|++..++++++-.+|..+|-.....+.+.+. .|
T Consensus 119 ~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~W------ 187 (493)
T KOG1330|consen 119 NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WW------ 187 (493)
T ss_pred HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ce------
Confidence 2678888888999999999999999999999999999999999999999999888776666654332 25
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhhccccccccch
Q 039943 532 KGRYDYYYWLLAGLNMASFIYFLACCKAYGPCREEA 567 (581)
Q Consensus 532 ~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 567 (581)
++.|...+++.++..++.+++.++.+++..++
T Consensus 188 ----r~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 188 ----RWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred ----EEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 67788999999999999888888766654443
No 231
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.20 E-value=4.7e-06 Score=90.07 Aligned_cols=145 Identities=9% Similarity=-0.099 Sum_probs=112.4
Q ss_pred hhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhh-hcccCCCCcccccccccc
Q 039943 54 CGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTT-ILSQAQPPACDQLRSDCE 132 (581)
Q Consensus 54 ~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 132 (581)
++.+|+++.+.|.+.....++..++....+++.+| ++.|+++.++.++.+++........ .+.. .
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~-~------------ 345 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNL-A------------ 345 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeecccc-c------------
Confidence 45799999999999999999999999999999999 7999999999988888775543211 0000 0
Q ss_pred cccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcccc--
Q 039943 133 SATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLG-- 210 (581)
Q Consensus 133 ~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g-- 210 (581)
....+.+.++..-++.+++.+........++.+..|+ +.+++.++++....++|..+++.+++++.++.|
T Consensus 346 -~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~-------~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~ 417 (468)
T TIGR00788 346 -FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPS-------GCESSVFALLASILHLGSSVSGFLGVLLMETIGIT 417 (468)
T ss_pred -cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCC-------CceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 0001223455556778888888888889999999998 568999999999999999999999999988877
Q ss_pred ---chhhhHHHHH
Q 039943 211 ---WKVGFGVPAV 220 (581)
Q Consensus 211 ---~~~~f~~~~~ 220 (581)
++..+.+..+
T Consensus 418 ~~~~~~~~~~i~i 430 (468)
T TIGR00788 418 CDNSNNLWLLILG 430 (468)
T ss_pred cccccchHHHHHH
Confidence 6655544333
No 232
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.19 E-value=4.9e-05 Score=82.86 Aligned_cols=175 Identities=14% Similarity=0.058 Sum_probs=115.4
Q ss_pred HHHHHHHHhhhhhHHHHHhhh--hcCCcc------hhhHHHHHHHHHHHHHHHHHH----HHhhccccCchhhHHHHHHH
Q 039943 35 EAFERMASMGLMPNMILYLCG--EYNMET------TAGTNVLLIWTAATNFLPIIG----AFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~--~~~~s~------~~~~~i~~~~~~~~~i~~~~~----G~laDr~~Grr~~~~~~~~~ 102 (581)
.++....+|.+...++.++.. ..+.+. ...+++.++..+...+..++. +++.|| ++..+.+.+++++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHHHH
Confidence 334555566666666666442 111111 124566666666666666666 667777 5777889999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
.+++.+.+.++.+... ++ ...+.+++....++.|+|++...|...+++.+..|+ +.|++
T Consensus 360 ~~l~f~~l~~~~~~~~-------------~~-~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~-------~~rg~ 418 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN-------------DA-GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQ-------RLMGF 418 (500)
T ss_pred HHHHHHHHHHHHHhcC-------------CC-CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH-------HHHHH
Confidence 9999888877762211 00 122466788899999999999999999999999999 78999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhc----------cccchhhhHHHHHHHHHHHHHHHh
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQD----------NLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~----------~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.+|.+.....+|..++..+...... ..++.+.|...+++.++..+++++
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887777777766655543211 123566777766655444433333
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.19 E-value=2.9e-05 Score=79.13 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=110.4
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
.-++++.|+.+..|++..+++..++.+..+.++|.+++-++-.| +-..|++.+..+...+-.+...+++
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~~l~~---------- 323 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAVALIG---------- 323 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 45788999988899999999999999999999999999999999 6999998887766666666666665
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
+.. -+.+.++.|+..+..+|+..+...+..|... +.+++ .-....+|+++-|.+.|+
T Consensus 324 -------------g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~t------s~~s~---~l~maivGGAiiP~l~G~ 380 (422)
T COG0738 324 -------------GVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHT------SVGSG---LLVMAIVGGAIIPPLQGV 380 (422)
T ss_pred -------------ChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCccc------cccce---eeeeheecchHHHHHHHH
Confidence 333 3445678899999999999999999998533 23332 223456899999999999
Q ss_pred hhccccchhhhH
Q 039943 205 IQDNLGWKVGFG 216 (581)
Q Consensus 205 i~~~~g~~~~f~ 216 (581)
+.|..|-...+.
T Consensus 381 i~d~~g~~~~~~ 392 (422)
T COG0738 381 IADMFGIQLTFL 392 (422)
T ss_pred HHHhhhhHHHHH
Confidence 999988877766
No 234
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.19 E-value=4e-05 Score=82.15 Aligned_cols=206 Identities=12% Similarity=0.020 Sum_probs=143.7
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhhhhhHHHHHhhh-hcCCcch------h----hHHHHHHHHHHHHHHHHHHHHhhccc
Q 039943 21 PKGGLRTLPFIIANEAFERMASMGLMPNMILYLCG-EYNMETT------A----GTNVLLIWTAATNFLPIIGAFLADSC 89 (581)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~------~----~~~i~~~~~~~~~i~~~~~G~laDr~ 89 (581)
.++.+|.++.+.+..++..++++.+..+...|+.+ .++-++. + ..+....+.+...+..++--++.+|
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~- 331 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG- 331 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 35667888999999999999999888888888864 3443221 1 2344455555556667777888999
Q ss_pred cCc-hhhHHHHHHHHHHHHHHHHHhhhccc-CCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhc
Q 039943 90 VGR-YPMIGFGCITYLLGVVLLWLTTILSQ-AQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQ 167 (581)
Q Consensus 90 ~Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~ 167 (581)
+|+ |++..++.++.+++.....+..++.+ .++-..+|.. -.++....+..++...+.|+..+.....-++++++.
T Consensus 332 ~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 332 WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGES---LPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccc---cCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 795 77779998888888877776542110 0000000000 001111236667778889999999999999999999
Q ss_pred cCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcccc--chhhhHHHHHHHHHHHHHHHhcCCc
Q 039943 168 LEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLG--WKVGFGVPAVISLLSALSFFLASPF 235 (581)
Q Consensus 168 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g--~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (581)
.++++ ++.|..+|+++.+..+...+..+..|.+.+..| -.+.+.+.++.++++.+..++..|+
T Consensus 409 ~~~~~-----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 409 SSNLG-----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccccC-----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 98644 457999999999999999999988887655444 5567888888888887776665554
No 235
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.17 E-value=0.00046 Score=71.75 Aligned_cols=155 Identities=14% Similarity=0.163 Sum_probs=115.0
Q ss_pred hhHHHHHhhhh-cCCcchhhH-HHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 039943 46 MPNMILYLCGE-YNMETTAGT-NVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPA 123 (581)
Q Consensus 46 ~~~l~~yl~~~-~~~s~~~~~-~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (581)
-+++.+|+.+. .|++..|.. -+.-+.+-.+....++...+.|. +|-|++++.+.+..++...++.+..
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 36778899876 899998875 44555666777888999999999 7999999999999888888888877
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 124 CDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
+...+-+.-+..|++.+. ..+..+++-...|+ ++-.++.+....+.-+|-.++.+++-
T Consensus 93 --------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~-------~~yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 93 --------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDK-------EHYQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred --------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777787888888877665 34555665555555 56777888888888888888876665
Q ss_pred hhhc--cccchhhhHHHHHHHHHHHHHHHhc
Q 039943 204 YIQD--NLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 204 ~i~~--~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
.+.. ..++....++......++++..++.
T Consensus 151 llvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 151 LLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 5543 3457777777776666666554443
No 236
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.16 E-value=3.7e-05 Score=83.52 Aligned_cols=174 Identities=11% Similarity=0.056 Sum_probs=115.9
Q ss_pred HHHHHHHhhhhhHHHHHhhhhcCCcc----hhhHHHHHHHHHHHHHHHHHHHHhhccccCchhh-------HHHHHHHHH
Q 039943 36 AFERMASMGLMPNMILYLCGEYNMET----TAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPM-------IGFGCITYL 104 (581)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~~~~s~----~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~-------~~~~~~~~~ 104 (581)
.+....+......++.|.++..+.+. -..+++.+...+...+..|+.|++.|| +|+|+. +.+|+++.+
T Consensus 279 ~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~r-l~~r~~~~~~~~k~~~G~~l~~ 357 (489)
T PRK10207 279 VVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTH-LGSKGKDLSMPMKFTLGMFLCS 357 (489)
T ss_pred HHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHH-HhhCCCCCCcHHHHHHHHHHHH
Confidence 33445555555677777764322211 123455566667777888889999999 699974 777877777
Q ss_pred HHHHHHHHhhh-cccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 105 LGVVLLWLTTI-LSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
++.+.++.... ... . ....+.+++....++.|+|++...|...+++.+..|+ +.++.+
T Consensus 358 ~~~~~~~~~~~~~~~-------------~-~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~-------~~~g~~ 416 (489)
T PRK10207 358 LGFLTAAAAGMWFAD-------------A-QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ-------HLMGFI 416 (489)
T ss_pred HHHHHHHHHHHhhcC-------------C-CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH-------HHHHHH
Confidence 77654432210 000 0 0122567777889999999999999999999999998 779999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhc----------cccchhhhHHHHHHHHHHHHHHHh
Q 039943 184 FSWYYVSVLASSMVAVTCIVYIQD----------NLGWKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 184 ~~~~~~~~~~g~~~~p~~~~~i~~----------~~g~~~~f~~~~~~~~i~~~~~~~ 231 (581)
.++++...++|..+|..++.+... .-.+.+.|...++..++..++++.
T Consensus 417 ~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 417 LGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877765521 012455666655555544444443
No 237
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.08 E-value=1.7e-05 Score=85.20 Aligned_cols=164 Identities=13% Similarity=0.069 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc---cCchhhHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSC---VGRYPMIGFGCITYL 104 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~---~Grr~~~~~~~~~~~ 104 (581)
+|...+..++.....|++..++|.|+.+..|++..+++.+...+.++..++.+++|+++||. +.+|..+.....++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 56777888899999999999999999986779999999999999999999999999999992 255666555555544
Q ss_pred H-HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHH
Q 039943 105 L-GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSY 183 (581)
Q Consensus 105 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (581)
+ +.+.+.... .....+.+......+.+...++......+..... .+|.+.
T Consensus 355 ~~g~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~------~k~~~~ 405 (495)
T KOG2533|consen 355 IIGAISLLAAA-----------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGN------TKALTT 405 (495)
T ss_pred HHHHHHHHhhc-----------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccch------HHhHHH
Confidence 4 334433333 2223333333344445555666666666666442 345555
Q ss_pred HHHHHHHHhh-HHHHHHHHHHhhhccccchhhhHHHHH
Q 039943 184 FSWYYVSVLA-SSMVAVTCIVYIQDNLGWKVGFGVPAV 220 (581)
Q Consensus 184 ~~~~~~~~~~-g~~~~p~~~~~i~~~~g~~~~f~~~~~ 220 (581)
.+.+..+.+. |.+.+++..+.....++|...|++...
T Consensus 406 ~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 406 VSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred HhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 5555555544 444444444555555788888855433
No 238
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.05 E-value=0.00026 Score=68.02 Aligned_cols=151 Identities=19% Similarity=0.114 Sum_probs=91.5
Q ss_pred HHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccc
Q 039943 51 LYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSD 130 (581)
Q Consensus 51 ~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (581)
.|+.+++++...|.+.+..+-....++...+.|.++|| -|||+... .+.+..++++++..-
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracv----tycitYiLsCiTKhS-------------- 121 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACV----TYCITYILSCITKHS-------------- 121 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hcccccee----eehHHHHHHHHhhcC--------------
Confidence 45667899999999888777667777777889999999 79999765 445555566666522
Q ss_pred cccccchhHHHHHHHHHHHHHhccccchhhhhh-hhhccCCCCCcccchhhhHHHHHHH-HHHhhHHHHHHHHHHhhhcc
Q 039943 131 CESATWSQLMLLYSALGLMSLGGGGIRSSSLAF-GAEQLEKGDENKSKGALQSYFSWYY-VSVLASSMVAVTCIVYIQDN 208 (581)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~~~~~i~~~ 208 (581)
.++-.++++|++-|+..+...++..+. ++|.-.+.+- .++-...-++-.- .+..+-++++.+.+-.+.++
T Consensus 122 ------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~F--eqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~ 193 (454)
T KOG4332|consen 122 ------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGF--EQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDT 193 (454)
T ss_pred ------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCC--hHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 256678999999999999888777664 5555433221 0011111111111 11223333333444445554
Q ss_pred c--cchhhhHHHHHHHHHHHHH
Q 039943 209 L--GWKVGFGVPAVISLLSALS 228 (581)
Q Consensus 209 ~--g~~~~f~~~~~~~~i~~~~ 228 (581)
+ |-..+|-..+....++..+
T Consensus 194 ~slGPVAPFdAAacfLaigmAv 215 (454)
T KOG4332|consen 194 FSLGPVAPFDAAACFLAIGMAV 215 (454)
T ss_pred hccCCCCchHHHHHHHHHHHHH
Confidence 3 5556666555555555433
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.96 E-value=4.8e-05 Score=79.99 Aligned_cols=158 Identities=9% Similarity=0.035 Sum_probs=128.6
Q ss_pred hhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 45 LMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 45 ~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
+.+++--++ ++.+-..+-.|.+......+-.+.-++.+++-.| +|+-+++..++..+.+=.+.+....
T Consensus 390 v~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L~---------- 457 (618)
T KOG3762|consen 390 VFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYLQ---------- 457 (618)
T ss_pred HHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHHhc----------
Confidence 344443344 5667666666655566666667778899999999 6999999999999998888888777
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHH-hhHHHHHHHHHH
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSV-LASSMVAVTCIV 203 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~p~~~~ 203 (581)
|.|+.+-.-+++|+..+..+.++.+|+++..|+ +.|.++-++..... .+|-.+|.+++|
T Consensus 458 -------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp-------~l~at~Q~l~~g~f~GlG~g~GslIGG 517 (618)
T KOG3762|consen 458 -------------NPWMVLPIEILQGITHALIWAAIISYASHVAPP-------GLRATAQGLLQGIFHGLGKGLGSLIGG 517 (618)
T ss_pred -------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCC-------cchHHHHHHHHHHhcccCcchhhhhhh
Confidence 778888889999999999999999999999999 67888888877544 799999999999
Q ss_pred hhhccccchhhhHHHHHHHHHHHHHHHhcCC
Q 039943 204 YIQDNLGWKVGFGVPAVISLLSALSFFLASP 234 (581)
Q Consensus 204 ~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (581)
.+...+|-+..|.+.+++.++.++.+.....
T Consensus 518 ~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 518 FVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999998888777766655443
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.95 E-value=5.3e-05 Score=59.62 Aligned_cols=65 Identities=25% Similarity=0.253 Sum_probs=54.4
Q ss_pred HHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 36 AFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
++...+...+.++++.|++ +.|++..|.|.+.++..+...+++++.|+++|| +||++.++....+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHH
Confidence 3344444557788999987 589999999999999999999999999999999 6998888766544
No 241
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.87 E-value=0.00041 Score=76.03 Aligned_cols=184 Identities=14% Similarity=0.105 Sum_probs=102.1
Q ss_pred CCchHHHHHHHHHHHHHHH-hhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHH
Q 039943 24 GLRTLPFIIANEAFERMAS-MGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
.+|..........+..++. ..+..+.+..+ +..|.+... .+...+..+...++..++.++.|| +|||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHHH
Confidence 3444443444444444444 44555555554 466666443 555666677777888888999999 6999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhH
Q 039943 103 YLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQS 182 (581)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (581)
+.++.++++.......... . .........+....+.......+..|..+.+.+|.+|. +.|+.
T Consensus 369 m~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~-------~~r~~ 431 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYP--------N--SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL-------RLRSK 431 (513)
T ss_pred HHHHHHHHHHHHHHhccCC--------C--cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH-------hHHhh
Confidence 9999988887652221000 0 00000111222222222222233345666788999999 67888
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHH
Q 039943 183 YFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSAL 227 (581)
Q Consensus 183 ~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~ 227 (581)
+.++......+...+--.......+..++...|.+.+....+..+
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 888755444333332222222333333334455555554444444
No 242
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.87 E-value=1.7e-07 Score=100.68 Aligned_cols=184 Identities=14% Similarity=0.156 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
+........+..+..+....+..+++.+..+.+.. -.......+...++.+++.++.|| +|||++++.+.++.+++.
T Consensus 254 ~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~ 330 (451)
T PF00083_consen 254 LLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICS 330 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc-cccccccccccccccccc
Confidence 33333444444444444444444555566777666 233344555666777888899999 799999999988888777
Q ss_pred HHHH-HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 108 VLLW-LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 108 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
+.++ ....... .+...+...+............+..+....+.+|.+|. +.|+++.++
T Consensus 331 ~~~~~~~~~~~~--------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt-------~~R~~~~~~ 389 (451)
T PF00083_consen 331 LILGIIFFLGVS--------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT-------KVRSTGIGL 389 (451)
T ss_pred cccccccccccc--------------cccccccccceeeeeccccccccccccccccccccccc-------ccccccccc
Confidence 6665 1110000 00000111111111111112223446677889999999 679999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPF 235 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (581)
.+....+++.++|.+...+.+..+-...|.+.+.+.++..+...+..|+
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 9988889999999888888777663345555555555555444444443
No 243
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.84 E-value=0.01 Score=61.89 Aligned_cols=126 Identities=15% Similarity=0.115 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHH
Q 039943 65 TNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYS 144 (581)
Q Consensus 65 ~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (581)
+.+..+-.+-..+..+++-++.+| +.-+.=+....++..+|.++.++++ +.+.=++
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~-v~y~~Ri~~~~~l~~~g~l~va~~~-----------------------~v~~~l~ 117 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHR-VPYWIRILICVALSAAGMLLVAFSP-----------------------SVWVRLL 117 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhh-ccchHHHHHHHHHHHHHHhheeecc-----------------------chhHHHH
Confidence 335555556677777788888898 5644334445667788888888876 6777788
Q ss_pred HHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc-cccchhhhHHHHHHHH
Q 039943 145 ALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD-NLGWKVGFGVPAVISL 223 (581)
Q Consensus 145 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~-~~g~~~~f~~~~~~~~ 223 (581)
+..+.+++.|.......++.+ .+++. ..+-+..+...++.+|+..-..+.+ ..+.|..+.+..+..+
T Consensus 118 Gv~las~ssg~GE~tfL~lt~-~y~~~-----------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~ 185 (402)
T PF02487_consen 118 GVVLASLSSGLGEVTFLSLTH-FYGKS-----------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPA 185 (402)
T ss_pred HHHHHhhhhhhhHHHHHHHHH-hcCcc-----------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 899999999998888888744 55541 2333344455566666644333433 2334556666655443
Q ss_pred HHH
Q 039943 224 LSA 226 (581)
Q Consensus 224 i~~ 226 (581)
+-+
T Consensus 186 ~~~ 188 (402)
T PF02487_consen 186 IFL 188 (402)
T ss_pred HHH
Confidence 333
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.69 E-value=0.057 Score=57.88 Aligned_cols=164 Identities=11% Similarity=0.037 Sum_probs=100.4
Q ss_pred chHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCc-----chhhHHHHHHHHHHHHHH-HHHHHHhhccccCchhhHHHH
Q 039943 26 RTLPFIIANEAFERMASMGLMPNMILYLCGEYNME-----TTAGTNVLLIWTAATNFL-PIIGAFLADSCVGRYPMIGFG 99 (581)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-----~~~~~~i~~~~~~~~~i~-~~~~G~laDr~~Grr~~~~~~ 99 (581)
+.++...+..++-.+.|+.+.+ +.|.+..+ .+...++-....+.+.+. .++-+++++| ++|++++.+.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~ 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTV 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHH
Confidence 4455555555666666554443 45666553 345666666665655555 8889999999 6999999988
Q ss_pred HHHHHHHHHHHHHhhh-ccc-CCCC-cccccccccccc---------cchhHHHHHHHHHHHHHhccccch-hhhhhhhh
Q 039943 100 CITYLLGVVLLWLTTI-LSQ-AQPP-ACDQLRSDCESA---------TWSQLMLLYSALGLMSLGGGGIRS-SSLAFGAE 166 (581)
Q Consensus 100 ~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~l~g~~~g~~~~-~~~~~~~~ 166 (581)
...+.....++++.-- ..+ ..|. .+|+... .... +.+....+++..=+.| ....+ ..+++..|
T Consensus 81 ~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~-~~~~~~~~~i~~~~~W~~~~FYv~~elw~---~~vvS~lFW~fand 156 (472)
T TIGR00769 81 ISPFLGFFALFAFVIYPLSDLLHPTALADKLLS-LLPPGFMGFIAILRIWSFALFYVMAELWG---SVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHh-hcchhhHHHHHHHhhhhHHHHHHHHHHHH---HHHHHHHHHHHHHh
Confidence 8888777766666520 000 0000 0000000 0000 1112223443333333 22333 67899999
Q ss_pred ccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 167 QLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 167 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
.+.. ++-.|.++++..+.|+|..+++.+..++.
T Consensus 157 i~t~-------~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 157 ITTI-------DEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred cCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 66888999999999999999998888876
No 245
>PTZ00207 hypothetical protein; Provisional
Probab=97.65 E-value=0.00034 Score=76.83 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=91.7
Q ss_pred hhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 039943 391 ILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAF 470 (581)
Q Consensus 391 ~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 470 (581)
..+++.+|+|+| +.+.+|.++.++++++.+.... + ....+.+.+++..++.++|.+.
T Consensus 80 p~G~L~Dr~G~R-------~vllig~ll~~iG~ll~ala~~---------~-------~i~~s~~~l~l~r~l~G~G~~~ 136 (591)
T PTZ00207 80 PYSFIYDYLGPR-------PIFVLSMTVFCLGTLLFALTFQ---------E-------VIEGSVVRLSVYNGLMTLGCML 136 (591)
T ss_pred HHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHhc---------c-------cccCcHHHHHHHHHHHHHHHHH
Confidence 345677886655 6888999999998887776421 0 0013567777778889999988
Q ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHH
Q 039943 471 NMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASF 550 (581)
Q Consensus 471 ~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~ 550 (581)
..+.......+.+| +.||++.|+......+|+.+.+.+...+... +| ...|++++++.++..
T Consensus 137 ~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-------~~----------~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 137 FDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-------NT----------SAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hH----------HHHHHHHHHHHHHHH
Confidence 88888878888887 5699999999999999998755544443321 22 556777888887777
Q ss_pred HHHhhhhccc
Q 039943 551 IYFLACCKAY 560 (581)
Q Consensus 551 ~~~~~~~~~~ 560 (581)
++.+.+.+..
T Consensus 199 ll~~~~vr~p 208 (591)
T PTZ00207 199 ILAIVFMRLP 208 (591)
T ss_pred HHHHhheeCC
Confidence 7766665543
No 246
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.62 E-value=0.0013 Score=69.61 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=91.8
Q ss_pred chhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHH
Q 039943 390 RILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMA 469 (581)
Q Consensus 390 ~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 469 (581)
.....++||+|.| +.+.++.+..++..++.++.. +++.+.+.-++.|++++
T Consensus 80 Ip~GlLaDrlG~K-------~vL~l~~l~Wsl~t~L~~fa~----------------------Sl~~L~i~R~llGvaEA 130 (511)
T TIGR00806 80 VPVFLLTDYLRYK-------PVLVLQALSFVCVWLLLLLGT----------------------SVWHMQLMEVFYSVTMA 130 (511)
T ss_pred HHHHHHHHHhCch-------HHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHH
Confidence 3344578886655 578888888777777766632 56778888999999999
Q ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHH
Q 039943 470 FNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMAS 549 (581)
Q Consensus 470 ~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~ 549 (581)
... ....+++.-+|++.|++++|+.+....+|.++++.+.+.+.. . +|- .|....++..+...++
T Consensus 131 ~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s-~------gWr-------~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 131 ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-L------GWI-------SYSTLNIISLVFMTFS 195 (511)
T ss_pred HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c------Cch-------hHHHHHHHHHHHHHHH
Confidence 999 999999999999999999999999999999999999998432 2 452 2444444444444445
Q ss_pred HHHHhhhh
Q 039943 550 FIYFLACC 557 (581)
Q Consensus 550 ~~~~~~~~ 557 (581)
+++.+++.
T Consensus 196 ~~~a~~LP 203 (511)
T TIGR00806 196 VFLALFLK 203 (511)
T ss_pred HHHHHhCC
Confidence 55544443
No 247
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.56 E-value=9.7e-05 Score=76.38 Aligned_cols=179 Identities=18% Similarity=0.080 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHH--------HHHHHHH-HHHHHHHHHHHhhccccCchhhHH
Q 039943 27 TLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTN--------VLLIWTA-ATNFLPIIGAFLADSCVGRYPMIG 97 (581)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~--------i~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~ 97 (581)
.++.....+|...+++|+...+...-+ +..|+.+.+... ...+... ++..+..++.++.|+ +|||+.-+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~ 382 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQL 382 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHH
Confidence 344455677777788888766655444 345554443332 1111222 222355666778999 79999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccc
Q 039943 98 FGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSK 177 (581)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (581)
.+.+++.+....++...+.. .+......++..-. =++.-+-....-.+-+|.||.
T Consensus 383 ~GF~~~~i~~~~~~~~y~~~----------------~~~~Gf~v~y~l~~--ff~NFGPn~ttfivpaE~FPa------- 437 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAGPYNQL----------------ENTIGFVVLYSLTF--FFGNFGPNATTFIVPAEIFPA------- 437 (538)
T ss_pred hhHHHHHHHHHHHcCCcccc----------------cccCceeehHHHHH--HHHhcCCCceeEEeehhhchH-------
Confidence 99999998888777765210 01112222222222 233333334555667899999
Q ss_pred hhhhHHHHHHHHHHhhHHHHHHHHHHhhhc-----cccchhhhHHHHHHHHHHHHHHHhc
Q 039943 178 GALQSYFSWYYVSVLASSMVAVTCIVYIQD-----NLGWKVGFGVPAVISLLSALSFFLA 232 (581)
Q Consensus 178 ~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~-----~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (581)
+.|+...++...+.-.|+++|.....++.+ ..+.+++|++.+.+++++.+..++.
T Consensus 438 rvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 438 RVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred HHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 789999999998889999999999999998 7889999999988888777665543
No 248
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.53 E-value=0.00065 Score=73.26 Aligned_cols=122 Identities=13% Similarity=0.070 Sum_probs=81.9
Q ss_pred hhhHhhhh-cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 039943 392 LQPIASKI-RGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAF 470 (581)
Q Consensus 392 ~~~~~~r~-~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 470 (581)
...+.||+ |+| +.+.+|.++++++.++..... .+.......+.+..+|.++
T Consensus 65 gG~LaDRilGrr-------r~iliG~il~~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~ 116 (493)
T PRK15462 65 GGFLADKVLGNR-------MAVMLGALLMAIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGL 116 (493)
T ss_pred HHHHHHHccCcH-------HHHHHHHHHHHHHHHHHHHhh---------------------cchhHHHHHHHHHHHhccc
Confidence 44577776 555 577888888887766543211 0111223334445566666
Q ss_pred HhhhhheeecccCCch--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHH
Q 039943 471 NMIGQIEFYYSELPRS--MSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMA 548 (581)
Q Consensus 471 ~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~ 548 (581)
..+...+++.+.+|++ .|.++.++.....++|+.+++.+.+.+.+.. +| +..|.+.++..++
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------Gw----------~~~F~iaaigm~l 180 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------SW----------AMGFGLAAVGMIA 180 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------Ch----------HHHHHHHHHHHHH
Confidence 6677778888999875 7999999999989999999999999886532 34 7778776666665
Q ss_pred HHHHHhhhh
Q 039943 549 SFIYFLACC 557 (581)
Q Consensus 549 ~~~~~~~~~ 557 (581)
+.+.+++..
T Consensus 181 ~li~~~~~~ 189 (493)
T PRK15462 181 GLVIFLCGN 189 (493)
T ss_pred HHHHHHHhh
Confidence 555554433
No 249
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.50 E-value=0.00064 Score=76.20 Aligned_cols=106 Identities=14% Similarity=0.081 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC---CC--CCcCC
Q 039943 454 AMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGG---KE--GWIPS 528 (581)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~---~~--~w~~~ 528 (581)
+..+++.-++.|+|.+...+....++.|.+|++.|+.+.|+......+|..+++.+.+.+.+...... .+ +.-++
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~ 251 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPT 251 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCC
Confidence 44556788999999999999999999999999999999999999999999999999888775432100 00 00000
Q ss_pred CCC-CchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 529 NIN-KGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 529 ~~~-~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
+-. .+.....|++.+++.++.++.++++.++
T Consensus 252 dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 252 DPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 000 0112345777777777766655544433
No 250
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.49 E-value=0.2 Score=53.19 Aligned_cols=192 Identities=12% Similarity=-0.024 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHH
Q 039943 28 LPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGV 107 (581)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 107 (581)
.+.+-..-++..+..=..-.-.+.|+.+-+.-+---.+..-.+-.+..++..+..|...|| .-|.+++..+++..-++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHH
Confidence 3444445555555554555556777776655444444444555556667778888999999 699999988877654443
Q ss_pred HHHHHhhhcccCCCCcccccccccccc-cchhHHHHHHHHHHHH-HhccccchhhhhhhhhccCCCCCcccchhhhHHHH
Q 039943 108 VLLWLTTILSQAQPPACDQLRSDCESA-TWSQLMLLYSALGLMS-LGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFS 185 (581)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (581)
...+..--.-. ....+.. +......+++...+.| +.-=.......+.=-|+...-.+ ++...+.+..+
T Consensus 83 ~~s~~~~~~l~---------~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~-~~~~~La~~NA 152 (432)
T PF06963_consen 83 AASCALFLLLL---------SYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAG-GDPGALARMNA 152 (432)
T ss_pred HHHHHHHHHHH---------hCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcC-CChhhHHHHHH
Confidence 32222110000 0000000 1112222333222332 22222222233333344332111 11144555555
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
...-.=.+--.++|++.|.+.+..+......+.+...++++.+=.
T Consensus 153 ~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 153 TMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 554444578899999999999888888777777666666665433
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.35 E-value=0.0033 Score=68.90 Aligned_cols=152 Identities=9% Similarity=-0.055 Sum_probs=107.2
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcch---hhHHHHHHHHHHHHHHHHHHHHhhccccCchhhH-HHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETT---AGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMI-GFGC 100 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~-~~~~ 100 (581)
.|.+...++..++..+.+|.+..+.|......++-+.. +.+++...+.++..++.++.|.+.-+ ++|-|.. +++.
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~~ 387 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFGS 387 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHHH
Confidence 46666667777888888888888888877767766653 57788888889999999999999988 6875554 5666
Q ss_pred HHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhh
Q 039943 101 ITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGAL 180 (581)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 180 (581)
+++.++...++... +.+....++..++.|++.|...........-..|+ +..
T Consensus 388 ~~~ta~~Gama~~~---------------------~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~-------~~i 439 (599)
T PF06609_consen 388 VLMTAFCGAMAAVR---------------------PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPD-------EDI 439 (599)
T ss_pred HHHHHHHHHHHHcc---------------------CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCc-------hHH
Confidence 66655544444433 11333345667788888887665555554444455 569
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHhh
Q 039943 181 QSYFSWYYVSVLASSMVAVTCIVYI 205 (581)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~p~~~~~i 205 (581)
+.+.++......+|+.+|..+..-+
T Consensus 440 g~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 440 GTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999998888889998888765444
No 252
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.29 E-value=0.0015 Score=71.76 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=96.1
Q ss_pred ccchhhhHhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHH
Q 039943 388 YDRILQPIASKIRGKPCQLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLA 467 (581)
Q Consensus 388 ~~~~~~~~~~r~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 467 (581)
...+..++.||+||| ..+..++++..++-+..++ ..+++..++.-++.|++
T Consensus 134 G~~i~g~lsD~~GRk-------~~~~~~~~~~~i~~~~~a~----------------------a~~~~~~~~~Rfl~G~~ 184 (521)
T KOG0255|consen 134 GSLIFGPLSDRFGRK-------PVLLVSLLLFIIFGILTAF----------------------APNYWMFLIFRFLSGFF 184 (521)
T ss_pred HHhhheehHhhcccH-------HHHHHHHHHHHHHHHHHHH----------------------hCcHHHHHHHHHHHHhh
Confidence 334456788898888 4677777777666655555 23777888888999999
Q ss_pred HHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHH
Q 039943 468 MAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNM 547 (581)
Q Consensus 468 ~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~ 547 (581)
..........+..|..+++.|+.+..+ ....+.++.+++...+.+.. +| .+.+++..+...
T Consensus 185 ~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W----------r~~~~~~~~~~~ 245 (521)
T KOG0255|consen 185 GSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW----------RWLFWIISIPSG 245 (521)
T ss_pred ccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------HHHHHHHHHHHH
Confidence 999999999999999999999999999 88888888888888877764 45 667777777777
Q ss_pred HHHHHHhhhhccccc
Q 039943 548 ASFIYFLACCKAYGP 562 (581)
Q Consensus 548 ~~~~~~~~~~~~~~~ 562 (581)
+.+++ +++.+|.++
T Consensus 246 ~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 246 LFLLL-WFLPPESPR 259 (521)
T ss_pred HHHHH-HHccCcChH
Confidence 66665 555545444
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.26 E-value=0.0025 Score=50.78 Aligned_cols=65 Identities=8% Similarity=0.025 Sum_probs=59.5
Q ss_pred HHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhh
Q 039943 49 MILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTT 114 (581)
Q Consensus 49 l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 114 (581)
+.+.++++.++|.++++++.+...+++.+|.+...++.++ ..+++.+..+++...+....+++..
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456778999999999999999999999999999999999 5889999999999999999998877
No 254
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.19 E-value=0.0053 Score=62.40 Aligned_cols=124 Identities=10% Similarity=0.015 Sum_probs=103.4
Q ss_pred hhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccC--chhhHHHHHHHHHHHHHHHHHhhhcccCCCCccccccccc
Q 039943 54 CGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVG--RYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDC 131 (581)
Q Consensus 54 ~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (581)
-+.+|+++.|.|-+.+...+.+.+.+..-....||. . -+-.+..++.+..-..++...+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~-~~~~~a~l~~~l~~~vP~~llls~~~----------------- 350 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRY-KGNIKAVLLFSLLLIVPAFLLLSLAR----------------- 350 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhcccccccc-ccchhhHHHHHHHHHHHHHHHHhccc-----------------
Confidence 467999999999999888888888888888888884 4 45556666666666666666666
Q ss_pred ccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhcc
Q 039943 132 ESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDN 208 (581)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~ 208 (581)
....++++..+..+..+...++...++....|+ ++||...|+....+.++-++||+++|.+..+
T Consensus 351 ------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~-------~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 351 ------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQ-------SQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred ------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCc-------ccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 567789999999999999999999999998888 6799999999999999999999999888654
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.05 E-value=0.029 Score=50.67 Aligned_cols=114 Identities=11% Similarity=0.180 Sum_probs=85.9
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchh
Q 039943 59 METTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQ 138 (581)
Q Consensus 59 ~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (581)
++....-.-.++......+++++...+.++ +|.|+.++++.+.+.+-...... + +
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~-~-----------------------~ 88 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFY-P-----------------------N 88 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHh-h-----------------------h
Confidence 333343444566666777888888899999 79999999999888865444322 2 4
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 139 LMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 139 ~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
.+.++.+-++.|++.+..+.....++.+..++ +.+++-.+++......+..+|.++.-.
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~-------~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTE-------ETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH-------HHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788889999999999999999999987766 568888888777777777777655433
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.76 E-value=0.0095 Score=63.78 Aligned_cols=127 Identities=16% Similarity=0.197 Sum_probs=106.5
Q ss_pred HHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHH-HhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 039943 48 NMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGA-FLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ 126 (581)
Q Consensus 48 ~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G-~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (581)
.++.|+...++++.++.+...+.......+++.+.. .+.-. +|-|+++..|+....+...+.+++.
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------ 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------ 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc------------
Confidence 346788889999999999999999999999998887 66666 7999999999999999999999998
Q ss_pred cccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 127 LRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
+.|..+....+.++. +...|...++++.+..+ +++++.+++......+...++|.+-+.+.
T Consensus 330 -----------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~-------~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 -----------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSP-------EEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred -----------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccc-------ccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 667777776655544 56678888988888877 56999999999999999999998876653
No 257
>PRK03612 spermidine synthase; Provisional
Probab=96.47 E-value=0.18 Score=55.21 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=82.0
Q ss_pred HHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHH---HHHHHHhhhcccCCCCccccc
Q 039943 51 LYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLG---VVLLWLTTILSQAQPPACDQL 127 (581)
Q Consensus 51 ~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 127 (581)
-.+.-.+|-+..+.+.+++++.++..+|..++|+++++ .-|+ ...+-+.+..++ ..++.....+.
T Consensus 39 r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~---------- 106 (521)
T PRK03612 39 TLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAG-FVAVELLLALLGGLSALILYAAFAFQ---------- 106 (521)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 33444578888899999999999999999999988755 2222 222222221111 11111111000
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 128 RSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
......++...++.++..|+..|....+..+... ++-++..+..|....+|+++|.++.+++.-
T Consensus 107 --------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~--------~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 107 --------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD--------QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 0011223444556677777777777766544322 123455677777788888888888887654
Q ss_pred -cccchhhhHHHHHHH
Q 039943 208 -NLGWKVGFGVPAVIS 222 (581)
Q Consensus 208 -~~g~~~~f~~~~~~~ 222 (581)
.+|-....++.+.+.
T Consensus 171 p~lG~~~t~~~~a~l~ 186 (521)
T PRK03612 171 PRLGLIRTAALTGSLN 186 (521)
T ss_pred HhcchHHHHHHHHHHH
Confidence 466444444444433
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.44 E-value=0.017 Score=60.11 Aligned_cols=175 Identities=15% Similarity=0.135 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCch-hhHHHHHHHHHHHHHHHH
Q 039943 33 ANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRY-PMIGFGCITYLLGVVLLW 111 (581)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr-~~~~~~~~~~~~~~~~~~ 111 (581)
++....-..+++....+-.-+ ..-|.+...+|.+.....+++++++.+.|.++|| .... ++..+......++...+.
T Consensus 273 ~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk-tk~fk~~~~v~~~~~~v~~~~l~ 350 (480)
T KOG2563|consen 273 ICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADK-TKKFKLTTLVLYLFALVGTLMLL 350 (480)
T ss_pred HHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 333333344444444443222 2456777889999999999999999999999999 4543 444444444444432222
Q ss_pred HhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhcc-CCCCCcccchhhhHHHHHHHHH
Q 039943 112 LTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQL-EKGDENKSKGALQSYFSWYYVS 190 (581)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~ 190 (581)
..... ....+.++..-.+.|+..-+..|.-.-+..|.. |..| +...|+....
T Consensus 351 ~~t~~-------------------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E--------~tSsGll~~~ 403 (480)
T KOG2563|consen 351 TCTLF-------------------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE--------GTSSGLLNLS 403 (480)
T ss_pred Hhhcc-------------------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC--------cccceeEEee
Confidence 22211 114456667777788888888888877777764 4433 2234444444
Q ss_pred HhhHHHHHHHHHHhhhcccc----chhhhHHHHHHHHHHHHHHHhcCCcc
Q 039943 191 VLASSMVAVTCIVYIQDNLG----WKVGFGVPAVISLLSALSFFLASPFY 236 (581)
Q Consensus 191 ~~~g~~~~p~~~~~i~~~~g----~~~~f~~~~~~~~i~~~~~~~~~~~~ 236 (581)
.++-+.+=...-+...+..+ |...-+......++..++..+.++.+
T Consensus 404 gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 404 GQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred hhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 44444444445555655554 33233333334444444444444443
No 259
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.19 E-value=0.041 Score=61.22 Aligned_cols=173 Identities=10% Similarity=0.143 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHH-HHHHHHHHHHhhccc-cCchhhHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAA-TNFLPIIGAFLADSC-VGRYPMIGFGCITYLLG 106 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~-~~i~~~~~G~laDr~-~Grr~~~~~~~~~~~~~ 106 (581)
....+...++...+-|..+++|.|+.++||.+...+..+++...+. ..+|.+++|++.-|+ ..-|.+..+.++...+.
T Consensus 395 ~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 395 MLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred HHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 4566788889999999999999999999999999999999777665 458999999999984 23456665555555544
Q ss_pred HHHHHH-----hhhccc--C------------------------------CCCcccccccc-------------------
Q 039943 107 VVLLWL-----TTILSQ--A------------------------------QPPACDQLRSD------------------- 130 (581)
Q Consensus 107 ~~~~~~-----~~~~~~--~------------------------------~~~~~~~~~~~------------------- 130 (581)
.+.... ..+... + ..++|++++.+
T Consensus 475 l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~ 554 (735)
T KOG3626|consen 475 LLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGN 554 (735)
T ss_pred HHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCc
Confidence 433111 011100 0 01333333111
Q ss_pred -----------------------cccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 131 -----------------------CESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 131 -----------------------~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
|+......+..|++..++..+..+...+....++-+..++ ++|.-+.|+.
T Consensus 555 ~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~-------e~ks~AlG~~ 627 (735)
T KOG3626|consen 555 TIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPP-------EEKSFALGFQ 627 (735)
T ss_pred eeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCc-------hhchhhhHHH
Confidence 1111133445555555555555555555566666677777 5699999998
Q ss_pred HHHH-hhHHHHHHHHHHhhhcc
Q 039943 188 YVSV-LASSMVAVTCIVYIQDN 208 (581)
Q Consensus 188 ~~~~-~~g~~~~p~~~~~i~~~ 208 (581)
.+.. .+|.+-+|++-|++.|.
T Consensus 628 ~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 628 WMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHhcCCchHhhhhhHhh
Confidence 8766 58999999999998874
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.15 E-value=0.058 Score=57.54 Aligned_cols=136 Identities=14% Similarity=0.081 Sum_probs=84.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccc-hHHHHHHHHHHHHHHHHHHhhhhheeecccCCc
Q 039943 407 RLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKM-SAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPR 485 (581)
Q Consensus 407 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 485 (581)
+.++.+..|.+++.++-+++...+.. +. ..+.+.++.++.|+|.+-.. ..-.|+.+..-.
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~------------------~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYV------------------PNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTV 160 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhc------------------ccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCc
Confidence 33567889999999998888655431 12 55677888899888854433 344566665445
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccccc
Q 039943 486 SMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPCR 564 (581)
Q Consensus 486 ~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~ 564 (581)
+.|.++.+.......+|.++|+.+......... .+..|+++ ..-+-|...-|+.++++++.+++.+++.+|..+..
T Consensus 161 ~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~--~G~~i~~~-~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 161 EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGE--KGFMILPG-LIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC--CceEEcCc-ceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 556667766666666666666665444332211 11234333 22233455667888888888888888888754443
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.14 E-value=1.9 Score=44.33 Aligned_cols=60 Identities=3% Similarity=-0.035 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039943 456 WVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDE 515 (581)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~ 515 (581)
..+..+.+.+......+....++-.+++|+...|+.+.+.|...++|+--=..+...+.|
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 344456676666666667777888899999999999999888777766554444444544
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.86 E-value=0.15 Score=54.02 Aligned_cols=147 Identities=16% Similarity=0.103 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCch-------hhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccc
Q 039943 64 GTNVLLIWTAATNFLPIIGAFLADSCVGRY-------PMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATW 136 (581)
Q Consensus 64 ~~~i~~~~~~~~~i~~~~~G~laDr~~Grr-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (581)
.++..+...+.-.+..|+..++--+ .+++ .-+-+++++...+.+++........ ..++.
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~-l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~-------------~~~~~ 391 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTK-LGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG-------------GPSGL 391 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhH-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc-------------CCCCC
Confidence 3456677777777778888888777 4554 2244556666666655555421000 01345
Q ss_pred hhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh------hhcccc
Q 039943 137 SQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY------IQDNLG 210 (581)
Q Consensus 137 ~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~------i~~~~g 210 (581)
.+.++++...+++++|+=+..|...++++...|+ +-.+..++.+......|..++..+.+. ..+...
T Consensus 392 ~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~-------~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~ 464 (498)
T COG3104 392 VSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP-------ALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFI 464 (498)
T ss_pred cCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH-------HHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhh
Confidence 5889999999999999999999999999999998 678888888887777777777666552 222334
Q ss_pred chhhhHHHHHHHHHHHHHHHh
Q 039943 211 WKVGFGVPAVISLLSALSFFL 231 (581)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~~~~ 231 (581)
....|+..+...++..+.+..
T Consensus 465 ~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 465 EGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred hhhhHHHHHHHHHHHHHHHHH
Confidence 555677766655544444433
No 263
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.60 E-value=0.13 Score=50.24 Aligned_cols=93 Identities=10% Similarity=0.088 Sum_probs=65.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCc
Q 039943 406 LRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPR 485 (581)
Q Consensus 406 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 485 (581)
.++...+.+|.+...+++.+...... + ...+.+.|.+.+..++.+.+..+..........+.+|.
T Consensus 63 ~gp~~~l~iG~~~~~~GY~~~~l~~~---------~------~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 63 FGPWVVLLIGAVLGFVGYGLLWLAVS---------G------RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHh---------C------ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 45667788999888888876655432 1 11234667666666676667666666666666678885
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039943 486 SMSSIASALHGLGMSVASLVASFIMNAVD 514 (581)
Q Consensus 486 ~~rg~~~g~~~~~~~ig~~i~~~i~~~i~ 514 (581)
+||++.|+.-....+++.+-+.+...++
T Consensus 128 -~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 128 -SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred -ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 6999999999888888888777666554
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.10 E-value=0.066 Score=55.99 Aligned_cols=125 Identities=10% Similarity=-0.001 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCch---
Q 039943 410 QRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRS--- 486 (581)
Q Consensus 410 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~--- 486 (581)
+.+.+|.++..+|++++...... .. ...+.+.+.+.+.+.++++|.++.-|+...+..++.+++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~-----~~--------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP-----PS--------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS-----SS--------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc-----ch--------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchh
Confidence 46778888888888876654320 00 011223456677888899999999999999999998865
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 039943 487 MSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPC 563 (581)
Q Consensus 487 ~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~ 563 (581)
.|.++-..+..+.++|..++..+.+++.+.. ++...|.+.++..+++.+.++.-.++++.+
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~----------------~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNY----------------GWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-----------------HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhcccc----------------chhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 4556666778888899999988888776432 347788888888888888877776666554
No 265
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.03 E-value=0.94 Score=48.13 Aligned_cols=145 Identities=8% Similarity=-0.040 Sum_probs=107.3
Q ss_pred HHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhc
Q 039943 37 FERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTIL 116 (581)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 116 (581)
+-.++.-++-..+..|+..+ |+++...|..-+.-.+....+++...++.+| +|-.|.=++++........++..+-+.
T Consensus 269 lLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~ 346 (432)
T PF06963_consen 269 LLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWA 346 (432)
T ss_pred HHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhc
Confidence 33344445567788899766 9999999999999999999999999999999 699999999988877766666554432
Q ss_pred ccCCCCcccccccccccc-cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHH
Q 039943 117 SQAQPPACDQLRSDCESA-TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASS 195 (581)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (581)
+. ++ +..+...++.+.++-=+|.=++--+..-++-|..|+ ++|+...+.-....++.-
T Consensus 347 ~~--------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~-------~~Rg~v~gvq~sl~~lf~ 405 (432)
T PF06963_consen 347 PG--------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPE-------SERGAVSGVQNSLQSLFE 405 (432)
T ss_pred CC--------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH-------HHhhHHHHHHHHHHHHHH
Confidence 22 00 122445555555554466666667777788888887 679999999998888888
Q ss_pred HHHHHHHHh
Q 039943 196 MVAVTCIVY 204 (581)
Q Consensus 196 ~~~p~~~~~ 204 (581)
.+-.+++-.
T Consensus 406 ll~~~~~ii 414 (432)
T PF06963_consen 406 LLSFVLTII 414 (432)
T ss_pred HHHHHHHhc
Confidence 887765443
No 266
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.87 E-value=0.0049 Score=67.53 Aligned_cols=104 Identities=11% Similarity=0.024 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh----c--------CC
Q 039943 454 AMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITK----R--------GG 521 (581)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~----~--------~~ 521 (581)
++.+++..++.|+|..-..+-..+|+.|.++++..+.+.|+......+|.++|-.+.+.+..... . ..
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~ 220 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPS 220 (539)
T ss_dssp -----------SSS------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCC
Confidence 45566688999999999999999999999999999999999999999999999888776654321 0 11
Q ss_pred CCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 039943 522 KEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGPC 563 (581)
Q Consensus 522 ~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~ 563 (581)
+..|+ |...--|.+.+++.++..+.++++.|+.++.
T Consensus 221 dp~Wv------GAWWLGfli~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 221 DPRWV------GAWWLGFLICGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp ------------------------------------------
T ss_pred CccHH------HHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 22332 2223346677888888888877776665554
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=93.50 E-value=1 Score=50.58 Aligned_cols=134 Identities=13% Similarity=0.037 Sum_probs=85.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccCCc
Q 039943 406 LRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPR 485 (581)
Q Consensus 406 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 485 (581)
++..+.+.++.++..+++.+...... +. .............+.+.++|.+..-|...++..++.++
T Consensus 51 lG~~~tIl~~~ii~~lG~~llai~a~------~~--------~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 51 LGKFKTILYLSIVYVVGHALLSFGAI------PS--------SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC------cc--------cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 34446788888888888766654211 00 00011223345667888889999999999999998875
Q ss_pred h---hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhccccc
Q 039943 486 S---MSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKAYGP 562 (581)
Q Consensus 486 ~---~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~ 562 (581)
+ .+-..-.++....++|+.+++.+.+.+.+..+ .+ ..+.++...|.+.+++++++.+++....+++++
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~-----~f----g~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~ 187 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVG-----CF----GCQDCYPLAFGVPAILMILALIVFMAGSKMYKK 187 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cc----ccCcchHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 4 35556666777777888888888887753221 00 001134677888888888888887766665543
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=92.93 E-value=0.69 Score=49.48 Aligned_cols=116 Identities=21% Similarity=0.141 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhhhheeecccC---Cc
Q 039943 409 KQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRAVVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSEL---PR 485 (581)
Q Consensus 409 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---P~ 485 (581)
+.-+.++.++.+++.+.++..... ..+.......+++..+|..+.-...-+.+.|.. |.
T Consensus 59 ~~Y~~i~~~~~~~~~~~~~~~~~~------------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 59 KPYMIIGWLLGAVSALVLALLPAS------------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccc------------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 356777777776666555543210 112333444556667777777776666666654 44
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 486 SMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSNINKGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 486 ~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
+ +|..++....+..+|++++..+.|.+.+.. +++..|.+.+++..+..+..+++.+|
T Consensus 121 ~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 121 S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 4 888899999999999999999988776532 12445777777777777676777665
No 269
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.91 E-value=0.36 Score=50.62 Aligned_cols=166 Identities=10% Similarity=-0.039 Sum_probs=99.7
Q ss_pred HhHHhhHhHHHhhHHHHHhhcC-CChhheecccCCCCCCCCcccCcccccchhhHHHHHHhhhccchhhhHhhhhcCCCC
Q 039943 326 KALIKVIPLWSTGIMIAVTISQ-SSFPVLQASTMDRHITPNFEIPSGSFGIFTIITVILWIGFYDRILQPIASKIRGKPC 404 (581)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~r~~ 404 (581)
++++......+.....|+...+ .+.+++. ........ ..+-...++..++..|+++..+|+.-.|+|||+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~-------S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR- 102 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWS-------SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR- 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccc-------cccccccccccceeccccccccccccccccccc-
Confidence 3444444444555666776666 5554433 23333321 122233466667788998888888888888773
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCC-cccchHHHHHHHHHHHHHHHHHHhhhhheeecccC
Q 039943 405 QLRLKQRMGIGLLFSTASMAAWAITETVRRNIAINEGISDDPRA-VVKMSAMWVLPYHVLSGLAMAFNMIGQIEFYYSEL 483 (581)
Q Consensus 405 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 483 (581)
..+..+.+..++++....+..+...-...+ ... .........++.+.+.-++.-+...+.-++..+..
T Consensus 103 -----PfI~~~s~~i~~~l~Lig~aaDig~~lgd~------~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~ 171 (498)
T KOG0637|consen 103 -----PFILAGSLLIAVSLFLIGYAADIGLLLGDN------ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLA 171 (498)
T ss_pred -----chHHHhhHHHHHHHhhhhhHhhhhHHhcCC------cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhc
Confidence 456777777777777666654432222222 221 11223333444555666666677777777888875
Q ss_pred CchhhHH-HHHHHHHHHHHHHHHHHHHHH
Q 039943 484 PRSMSSI-ASALHGLGMSVASLVASFIMN 511 (581)
Q Consensus 484 P~~~rg~-~~g~~~~~~~ig~~i~~~i~~ 511 (581)
-.+.+-+ +.+.+.+...+||.+|-.+.+
T Consensus 172 ~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 172 RGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cChhhhhccchhHHHHHHhcceeeeeccc
Confidence 5544555 999999999999999876655
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.55 E-value=4.9 Score=42.94 Aligned_cols=116 Identities=19% Similarity=0.142 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHhh---ccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccc-ccccccc--ccchhHHHHHH
Q 039943 71 WTAATNFLPIIGAFLA---DSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQ-LRSDCES--ATWSQLMLLYS 144 (581)
Q Consensus 71 ~~~~~~i~~~~~G~la---Dr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 144 (581)
..++..++..+.+.++ ++ +||++++.++.++..++.++.-+.. |. |- .+-|.+. -.+.+.....+
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~------dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PN------DAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cc------cCCCCCCcccccccccchhHHHH
Confidence 3344445555556665 45 6999999999998888877776654 11 10 0111111 12334556666
Q ss_pred HHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHH
Q 039943 145 ALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIV 203 (581)
Q Consensus 145 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 203 (581)
.-++.|++-+......+..+++.+|+ +|..+++++..-..++..++.....
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~~~--------~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLYPD--------DRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcC--------chHHHHHHHHHHHHHHHHHHhhhhh
Confidence 67889999999999999999999954 4777777777766666665544333
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.83 E-value=21 Score=38.30 Aligned_cols=167 Identities=11% Similarity=-0.026 Sum_probs=101.2
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCc---chhhHHHHHHHHH-HHHHHHHHHHHhhccccCchhhHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNME---TTAGTNVLLIWTA-ATNFLPIIGAFLADSCVGRYPMIGFGC 100 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s---~~~~~~i~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~~~~ 100 (581)
++.+..+.+..+|-.+.+..+. -+.|.+.++ ++...++-...-+ .+.+..++-+++.++ .-|.+++..-+
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~ 99 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHH
Confidence 4455555555555555443222 244555544 3444555555555 667888999999999 69999999988
Q ss_pred HHHHHHHHHHHHhhhccc--C-CCCc--ccccccccc-cc-------cchhHHHHHHHHHHHHHhccccchhhhhhhhhc
Q 039943 101 ITYLLGVVLLWLTTILSQ--A-QPPA--CDQLRSDCE-SA-------TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQ 167 (581)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~~~~-~~-------~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~ 167 (581)
..+....+++++.-. |. . .++| .+|.-.+++ +- +.++...+++.-=+.|.- ...-..+.+..|+
T Consensus 100 ~~F~~fF~LFa~Vi~-P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgsl--V~S~lFw~faNei 176 (509)
T COG3202 100 GFFLGFFALFAFVIY-PYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSL--VLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHHh-ccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 888888888887652 11 1 1111 111112222 11 123444444443333311 1112456777888
Q ss_pred cCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 039943 168 LEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD 207 (581)
Q Consensus 168 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~ 207 (581)
... ++-.|.+++++...|++..++..+..++..
T Consensus 177 tt~-------~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 177 TTI-------EEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhH-------HHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 877 568889999999999999999888888765
No 272
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.64 E-value=3.6 Score=37.08 Aligned_cols=62 Identities=10% Similarity=0.050 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039943 453 SAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVD 514 (581)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~ 514 (581)
+.+.+++.-++.|++.+..+++.-.++.+...++.+++-.++.......+.++|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788899999999999999999999999999999999998888888888877655443
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.53 E-value=29 Score=37.66 Aligned_cols=137 Identities=12% Similarity=0.062 Sum_probs=79.8
Q ss_pred cchhhHHHHHHHHH-HHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhccc---CCCCcc-cccc-ccccc
Q 039943 60 ETTAGTNVLLIWTA-ATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQ---AQPPAC-DQLR-SDCES 133 (581)
Q Consensus 60 s~~~~~~i~~~~~~-~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~-~~~~~ 133 (581)
+++....+-....+ ...+...+-.+++|+ ++|.+++.+.+..+.....+.++.- +|. +.+.+. |+.. ...++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~-~s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~ 133 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNR-LSREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPG 133 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccch
Confidence 33334444333333 445667788999999 6999999988877777666666543 111 111110 0000 00000
Q ss_pred c-------cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhh
Q 039943 134 A-------TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQ 206 (581)
Q Consensus 134 ~-------~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~ 206 (581)
- +.++...+|+.-=+.| .-...-..+.+..|.++. ++-.+.++++..+.|+|..++..+..++.
T Consensus 134 ~~~~i~~~~~Wt~slfYv~aElwg--svvlSlLFW~fAN~itt~-------~eAKRfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 134 FKGFIAMFRNWTFSLFYVMAELWG--SVVLSLLFWGFANEITTV-------EEAKRFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122223333333332 111122468888999888 66889999999999999999998888776
Q ss_pred c
Q 039943 207 D 207 (581)
Q Consensus 207 ~ 207 (581)
+
T Consensus 205 ~ 205 (491)
T PF03219_consen 205 S 205 (491)
T ss_pred H
Confidence 6
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.40 E-value=4 Score=42.78 Aligned_cols=61 Identities=11% Similarity=0.009 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhh
Q 039943 138 QLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYI 205 (581)
Q Consensus 138 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i 205 (581)
+.+..++..+..|+..|..+.+....+.|..++ ++|.-.++....+-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~-------~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPP-------EDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCH-------HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 677777888999999999999999999998776 5699999988888888888887766554
No 275
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=90.22 E-value=15 Score=39.69 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHH
Q 039943 142 LYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVI 221 (581)
Q Consensus 142 ~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~ 221 (581)
+.+..++.++..-......-..+.+.+|++ .+|...++-+....++.+.+..++++.+.+..||.....+.-++
T Consensus 269 ia~~vi~y~~~~nlve~~~k~~v~~~~p~~------~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii 342 (472)
T TIGR00769 269 LALLVIAYGISINLVEVTWKSKLKAQYPSP------NEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLV 342 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 333445556666666666778888888764 46899999988888888877777779999999999776664444
Q ss_pred HHH
Q 039943 222 SLL 224 (581)
Q Consensus 222 ~~i 224 (581)
.++
T Consensus 343 ~li 345 (472)
T TIGR00769 343 MLL 345 (472)
T ss_pred HHH
Confidence 443
No 276
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=89.00 E-value=5.9 Score=40.44 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=87.4
Q ss_pred hHHHHHhh-hhcCCcchhhH-HHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 039943 47 PNMILYLC-GEYNMETTAGT-NVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPAC 124 (581)
Q Consensus 47 ~~l~~yl~-~~~~~s~~~~~-~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (581)
+++.+|+. .+.+++..|.. -+.=+.+-.+.+.-++.=-+.|. .--|++++.-.+...+...++-+..
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~-lrYKPvivlq~ls~v~~w~~lv~g~---------- 93 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDY-LRYKPVVVLQALSGVPVWIMLVFGP---------- 93 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhh-hhcceeeeeeccchhHHHHHHHhcC----------
Confidence 45566665 45667666542 23334444555566666678998 5677887776666666666666665
Q ss_pred cccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHh
Q 039943 125 DQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVY 204 (581)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 204 (581)
+.+.+=+.-+.. |...++-.++-++.+.+-++ +.+.++.+....+.-.|-..|..++-.
T Consensus 94 -------------sV~~mQvlE~Fy----G~~tAaEIAYysYIYs~Vd~----~~Yqrvt~y~RaA~L~g~~~g~vlaQl 152 (433)
T KOG3810|consen 94 -------------SVKAMQVLEFFY----GPATAAEIAYYSYIYSKVDP----EMYKRVTGYCRAAFLVGKFVGSVLAQL 152 (433)
T ss_pred -------------Cchheeeehhhc----ChHHHHHHhhhheeeeecCH----HHHHHHHHHhHHHHHHHhHHHhHHHHH
Confidence 222222222233 33344444555555544333 678888888888888888888776665
Q ss_pred hhc--cccchhhhHHHHHHHHHHHHHHH
Q 039943 205 IQD--NLGWKVGFGVPAVISLLSALSFF 230 (581)
Q Consensus 205 i~~--~~g~~~~f~~~~~~~~i~~~~~~ 230 (581)
+.. ..++...=+++.....++.+...
T Consensus 153 Lvs~~~~sy~~LN~ISL~~~~ia~~~A~ 180 (433)
T KOG3810|consen 153 LVSLETLSYTTLNYISLAEVTIAVLLAL 180 (433)
T ss_pred HhhhcccchhhhchhhHHHHHHHHHHHh
Confidence 543 23454444445544444544433
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.87 E-value=36 Score=36.38 Aligned_cols=59 Identities=10% Similarity=0.060 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039943 453 SAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMN 511 (581)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~ 511 (581)
+-++.++.+++.|+..+........+..+.++++.|..+..+..+...+|-.+|+.+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667888999999988888888888899999999999998888888888877643
No 278
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=88.02 E-value=14 Score=37.89 Aligned_cols=93 Identities=15% Similarity=0.066 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhheee-----cccCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhcCCCCCCc
Q 039943 453 SAMWVLPYHVLSGLAMAFNMIGQIEFY-----YSELPRSMSSIASALHG-LGMSVASLVASFIMNAVDEITKRGGKEGWI 526 (581)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~P~~~rg~~~g~~~-~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~ 526 (581)
+.+.+++.=++.|++..+.+...-++. -...|++..+...+... ..+.+-.+.+..+...+.+..+.
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~------- 192 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF------- 192 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC-------
Confidence 455667777777777766665543322 23356665555444443 33444444444444444433221
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 039943 527 PSNINKGRYDYYYWLLAGLNMASFIYFLACCKA 559 (581)
Q Consensus 527 ~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 559 (581)
+....|.....+.+++.++.....+|
T Consensus 193 -------g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 193 -------GPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred -------CCcchHHHHHHHHHHHHHHHHhcccc
Confidence 11335666666666666665554444
No 279
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.78 E-value=6 Score=39.97 Aligned_cols=114 Identities=13% Similarity=0.051 Sum_probs=66.7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHH
Q 039943 25 LRTLPFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYL 104 (581)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~ 104 (581)
.|.++.+....++...++-|. .++......++| ..+ .+...+.-..++++.+.+..+ +|-|.++..+...+.
T Consensus 28 ~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg----~~s--l~~~y~~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~ 99 (390)
T KOG3097|consen 28 LKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLG----TVS--LGALYLSLIDSSMFMPLLIRF-LGTKWTMVLAVFPYA 99 (390)
T ss_pred hhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCcc----cch--hhhhhHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHH
Confidence 444555555444444444333 333333322222 222 233344455566666677777 799999988766655
Q ss_pred HHHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCC
Q 039943 105 LGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEK 170 (581)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 170 (581)
.....--. ..+..++-+-...|+|.+..+..--+++++.-..
T Consensus 100 lyiA~Nl~------------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 100 LYIAANLE------------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHhhcc------------------------hhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 43322111 1456677778889999999998888887776544
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.20 E-value=5.5 Score=42.60 Aligned_cols=57 Identities=11% Similarity=0.079 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 138 QLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 138 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
+-+..++..++.|+..|-.......+..+..++ ++|..+-.+...+..+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~-------~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDP-------HEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCH-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666778999999999988888888887665 557777777777777777777654
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=85.70 E-value=50 Score=34.66 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 039943 453 SAMWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFI 509 (581)
Q Consensus 453 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i 509 (581)
+-+|.++...++++..+-.......++.+..|++.+..+..+..+....|-+.|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 445667777888888888888888888888888888777777777777776666655
No 282
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=84.79 E-value=9.5 Score=37.51 Aligned_cols=138 Identities=10% Similarity=0.076 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCch---hhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHH
Q 039943 64 GTNVLLIWTAATNFLPIIGAFLADSCVGRY---PMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLM 140 (581)
Q Consensus 64 ~~~i~~~~~~~~~i~~~~~G~laDr~~Grr---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (581)
-|.+.+.|.++.++|.-+..++..| .|. +.+.+...+.+....+..+..+ . +++++++.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~--s~~~ve~ymqivf~vs~a~l~Lpilt~~-v---------------sP~kes~~ 345 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSR--SSPKVESYMQIVFLVSIAALLLPILTSS-V---------------SPSKESPS 345 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhc--CCcccchHHHHHHHHHHHHHHHHHHHhc-c---------------CCCcCCch
Confidence 3778888888888888888888776 233 3344443333333322222221 0 11233444
Q ss_pred HHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHHHHhhhc--cccchhhhHHH
Q 039943 141 LLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTCIVYIQD--NLGWKVGFGVP 218 (581)
Q Consensus 141 ~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~i~~--~~g~~~~f~~~ 218 (581)
.-+++..++-.+.|.++|....+=....|+ +.|++.++++..-.++-.-++-..- =.+ ..+-|..|.++
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPE-------earstimNfFRvPLnifvClvLynl--h~~~~p~~tr~mf~ic 416 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPE-------EARSTIMNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMFGIC 416 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCH-------HHHhhhhhheechhhHhhhhhheec--ccccCccccchhhhhh
Confidence 456677777888899999999988888887 5699999988876665443221110 011 13566788887
Q ss_pred HHHHHHHHHH
Q 039943 219 AVISLLSALS 228 (581)
Q Consensus 219 ~~~~~i~~~~ 228 (581)
.+...++.+.
T Consensus 417 S~~~~~a~i~ 426 (454)
T KOG4332|consen 417 SAFLFVASIL 426 (454)
T ss_pred HHHHHHHHHH
Confidence 7766665443
No 283
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=83.04 E-value=8.2 Score=39.94 Aligned_cols=75 Identities=16% Similarity=0.276 Sum_probs=39.8
Q ss_pred eecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhh------hhhc-CCCCCCcCCCCCCchhHHHHHHHHHHHHHHH
Q 039943 478 FYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDE------ITKR-GGKEGWIPSNINKGRYDYYYWLLAGLNMASF 550 (581)
Q Consensus 478 ~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~------~~~~-~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~ 550 (581)
.+..+..++..|-++.........|-+++..+.-.+.. ..+. +..++.+ ....++++.+.+.++..
T Consensus 157 wALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~I-------tL~gy~~fwg~~~~vat 229 (510)
T KOG3574|consen 157 WALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFI-------TLAGYLWFWGALFIVAT 229 (510)
T ss_pred HHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceE-------EhhHHHHHHHHHHHHHH
Confidence 33445566667777766666666666666544332221 0110 1111221 23445677777777777
Q ss_pred HHHhhhhcc
Q 039943 551 IYFLACCKA 559 (581)
Q Consensus 551 ~~~~~~~~~ 559 (581)
....++.++
T Consensus 230 ~Lv~~~kke 238 (510)
T KOG3574|consen 230 TLVALLKKE 238 (510)
T ss_pred HHHHHhcCC
Confidence 776666554
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=80.26 E-value=19 Score=38.71 Aligned_cols=77 Identities=13% Similarity=0.070 Sum_probs=43.2
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCc---CCCCCCchhHHHHHHHHHHHHHHHHHHhhhh
Q 039943 481 SELPRSMSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWI---PSNINKGRYDYYYWLLAGLNMASFIYFLACC 557 (581)
Q Consensus 481 ~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~---~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 557 (581)
.+..++.++-++..+......|-+++-.+.-.+.+..-.. .|+ |.+-.--....+..+.+.+.++..+...++.
T Consensus 145 T~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~N---ky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k 221 (544)
T PF13000_consen 145 TMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCN---KYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFK 221 (544)
T ss_pred hhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHH---HhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEe
Confidence 3456777888888777777777777765555444321000 111 1111111244455667777777777777776
Q ss_pred ccc
Q 039943 558 KAY 560 (581)
Q Consensus 558 ~~~ 560 (581)
+|.
T Consensus 222 ~E~ 224 (544)
T PF13000_consen 222 KEK 224 (544)
T ss_pred ecc
Confidence 663
No 285
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=78.99 E-value=32 Score=35.36 Aligned_cols=129 Identities=9% Similarity=-0.037 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHhhhhcC--CcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHH
Q 039943 31 IIANEAFERMASMGLMPNMILYLCGEYN--METTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVV 108 (581)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~--~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 108 (581)
..+-..+...++|-+..+....-. +.. -.+.--|.+-.+.++.+++..+..|.+.-+ +.|..-++++..-...+..
T Consensus 239 WSlWwAl~scg~~QV~nY~Q~LW~-~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~-w~r~g~~ll~~~s~~~agl 316 (433)
T KOG3810|consen 239 WSLWWALASCGYYQVTNYTQILWK-EVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNIN-WNRWGDLLLAVGSAVQAGL 316 (433)
T ss_pred hHHHHHHhhchhHHHHHHHHHHHH-hhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeec-cchhhHHHHHHHHHHhhhh
Confidence 334444555556655555543332 222 111122555677888899999999999877 5676555544443333444
Q ss_pred HHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHH
Q 039943 109 LLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYY 188 (581)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (581)
+...+. +.+++..+++-++...-.....+.+..-+++.... +.-+-.+|+..
T Consensus 317 lf~m~~---------------------t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~-------e~~gLvFGiNT 368 (433)
T KOG3810|consen 317 LFIMAQ---------------------TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSS-------ELFGLVFGINT 368 (433)
T ss_pred hhhhhc---------------------ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhh-------hhheeeeehHH
Confidence 433333 23688888888888877777777777777777766 45777777655
Q ss_pred H
Q 039943 189 V 189 (581)
Q Consensus 189 ~ 189 (581)
.
T Consensus 369 F 369 (433)
T KOG3810|consen 369 F 369 (433)
T ss_pred H
Confidence 4
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=77.63 E-value=1.1e+02 Score=33.20 Aligned_cols=154 Identities=9% Similarity=0.085 Sum_probs=88.3
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCc------------hh-hH-HHHHHHHHHHHHHHHHhhhccc-CCCC
Q 039943 58 NMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGR------------YP-MI-GFGCITYLLGVVLLWLTTILSQ-AQPP 122 (581)
Q Consensus 58 ~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Gr------------r~-~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 122 (581)
-.+..|+.-....+.+++.++.+++|.+.-. +.+ .. .+ ....++...+.+.+........ +.+.
T Consensus 172 itt~~eAKRfYpl~g~ganigli~sG~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~ 250 (491)
T PF03219_consen 172 ITTVEEAKRFYPLFGLGANIGLIFSGQLTSY-FSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTD 250 (491)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 3467888899999999999999999988665 454 01 11 1111122223333333221110 0000
Q ss_pred ccc--ccccc---------cccc----cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 123 ACD--QLRSD---------CESA----TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 123 ~~~--~~~~~---------~~~~----~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+.. +-..+ .|+. ....+..+.+..+..|+..-......-..+.+++|+++ .+...+|-+
T Consensus 251 ~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~------~ysafmG~~ 324 (491)
T PF03219_consen 251 PRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPN------DYSAFMGKF 324 (491)
T ss_pred cccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch------HHHHHHHHH
Confidence 000 00000 0000 12223334444555566666667777778888888754 588888888
Q ss_pred HHHHhhHHHHHHHHHHhhhccccchhhhHHH
Q 039943 188 YVSVLASSMVAVTCIVYIQDNLGWKVGFGVP 218 (581)
Q Consensus 188 ~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~ 218 (581)
+...++-+.+-..+++.+...+||+..-.+.
T Consensus 325 ~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 325 SSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 7777776666667788899999999876664
No 287
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=77.02 E-value=36 Score=35.93 Aligned_cols=130 Identities=11% Similarity=0.013 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhh--cCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH-
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGE--YNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL- 105 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~- 105 (581)
+.+.+-..+...+++-+.++......+. -+-...--|.+-.+.++.++++.+..|++..+ +.+-.-+..+.+-...
T Consensus 250 l~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~-w~~~~~l~l~~~S~l~a 328 (412)
T PF01770_consen 250 LLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVN-WDRWGELALGVFSLLQA 328 (412)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcc-hHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555444322 12233345888899999999999999999777 5775555555443333
Q ss_pred -HHHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHH
Q 039943 106 -GVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYF 184 (581)
Q Consensus 106 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (581)
..++++... +++..+++-++.+...-...+.+..=++..... +.-+-.+
T Consensus 329 ~~L~lm~~t~-----------------------~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~-------e~yaLVF 378 (412)
T PF01770_consen 329 GLLFLMSFTG-----------------------NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSE-------ERYALVF 378 (412)
T ss_pred HHHHHHHHhh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------cceeeee
Confidence 334444444 788888888888776666666666656655554 3456666
Q ss_pred HHHHH
Q 039943 185 SWYYV 189 (581)
Q Consensus 185 ~~~~~ 189 (581)
|+..+
T Consensus 379 GiNtf 383 (412)
T PF01770_consen 379 GINTF 383 (412)
T ss_pred eeHHH
Confidence 65444
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.37 E-value=16 Score=30.29 Aligned_cols=42 Identities=14% Similarity=-0.023 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHH
Q 039943 69 LIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLL 110 (581)
Q Consensus 69 ~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 110 (581)
+.=.+++.+.....||+-|||+|.++..++.+++...+.-++
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 333444444456678999999999998887666555544433
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=67.93 E-value=16 Score=38.25 Aligned_cols=92 Identities=14% Similarity=0.186 Sum_probs=59.0
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHH
Q 039943 64 GTNVLLI-WTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLL 142 (581)
Q Consensus 64 ~~~i~~~-~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (581)
....... +++.-.+|.+...++-++ +||+... ..++-.+...+..+++-.+ .+ ..-++-+++
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i-~v~lR~lfiPlF~~cn~~~--~~------------v~~~~~~~~ 346 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTI-PVLLRLLFIPLFLLCNYPP--LP------------VVFESDGWF 346 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC--CCceehH-HHHHHHHHHHHHHHhccCC--CC------------ceecCchHH
Confidence 3344455 778888888877777776 5555544 4555555555555443111 00 011255677
Q ss_pred HHHHHHHHHhccccchhhhhhhhhccCCCC
Q 039943 143 YSALGLMSLGGGGIRSSSLAFGAEQLEKGD 172 (581)
Q Consensus 143 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 172 (581)
+....++|+..|=..+....+..+..|+++
T Consensus 347 ~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 347 IFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred HHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 888899999999999999998888877743
No 290
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=66.42 E-value=1.6e+02 Score=30.04 Aligned_cols=81 Identities=14% Similarity=0.116 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccc-cCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccccchhHHHH
Q 039943 64 GTNVLLIWTAATNFLPIIGAFLADSC-VGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLL 142 (581)
Q Consensus 64 ~~~i~~~~~~~~~i~~~~~G~laDr~-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (581)
.|.+...=.+-..+..+..-.+-||+ +|.|-.+ ..++.+.+..+.+++. +.++-
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~--~v~~sa~s~~lVafs~-----------------------s~~~s 118 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIAL--VVLLSALSFFLVAFSN-----------------------SVPMS 118 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHH--HHHHHhcceEEEEecc-----------------------chhHH
Confidence 34455555556666677777888884 3444333 4455566666666666 67777
Q ss_pred HHHHHHHHHhccccchhhhhhhhhccCC
Q 039943 143 YSALGLMSLGGGGIRSSSLAFGAEQLEK 170 (581)
Q Consensus 143 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 170 (581)
+++..+..++.|......-++-+ .+|+
T Consensus 119 L~GV~~aSissGlGEiTFL~lss-~Y~~ 145 (409)
T KOG3880|consen 119 LLGVVFASISSGLGEITFLALSS-RYPS 145 (409)
T ss_pred HhhhhhhhhcCCcceeehhhhhc-cCCC
Confidence 88888888888887666666533 3444
No 291
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=65.42 E-value=1.2e+02 Score=28.97 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhheeecccCCc-hhhHHHHHHHHH-HHHHHHHHHHHHHHhhhh
Q 039943 454 AMWVLPYHVLSGLAMAFNMIGQIEFYYSELPR-SMSSIASALHGL-GMSVASLVASFIMNAVDE 515 (581)
Q Consensus 454 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~ig~~i~~~i~~~i~~ 515 (581)
.+.........+++.+...+....+..+..|+ +.|+...+.... ...++..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555557888888888888999999998 678888887777 566777777766555544
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=57.65 E-value=2.8e+02 Score=30.15 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 039943 455 MWVLPYHVLSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDEI 516 (581)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~ 516 (581)
..++..+++..+.....+.+..++-..++.+..-|++|.+.|...++|+.--..+.-.+.|.
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 34455678888887888888889999999999999999999999998887766555555553
No 293
>PRK03612 spermidine synthase; Provisional
Probab=55.02 E-value=1.5e+02 Score=32.47 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039943 463 LSGLAMAFNMIGQIEFYYSELPRSMSSIASALHGLGMSVASLVASFIMNAVDE 515 (581)
Q Consensus 463 ~~~~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~ 515 (581)
+.++..+...|-...+..+.. .+.-+...|-....+.+|+++|+.+.+.+.-
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 344445555555433332211 1123455666677888888888888776653
No 294
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=52.96 E-value=19 Score=35.23 Aligned_cols=57 Identities=12% Similarity=0.254 Sum_probs=42.8
Q ss_pred HHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHh---------hccccCchhhH
Q 039943 38 ERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFL---------ADSCVGRYPMI 96 (581)
Q Consensus 38 ~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~l---------aDr~~Grr~~~ 96 (581)
+..+---..+++..|++ +.|.++.+.+.++.+-++.-++..++.|.. -|| +|||+..
T Consensus 29 NDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~G~~~~w 94 (412)
T KOG4830|consen 29 NDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-IGRRMSW 94 (412)
T ss_pred hhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-hcceeee
Confidence 33333344577778887 557788888899999999999999999854 578 7998754
No 295
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=50.09 E-value=69 Score=22.94 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHH
Q 039943 71 WTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLL 105 (581)
Q Consensus 71 ~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~ 105 (581)
...+..+.....|+..|+.++.++..++..++..+
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 33445555667788888878997777655544444
No 296
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=48.24 E-value=6.3 Score=39.94 Aligned_cols=116 Identities=6% Similarity=0.006 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCchhhHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccccccc-cchhHHHHHHH
Q 039943 67 VLLIWTAATNFLPIIGAFLADSCVGRYPMIGFGCITYLLGVVLLWLTTILSQAQPPACDQLRSDCESA-TWSQLMLLYSA 145 (581)
Q Consensus 67 i~~~~~~~~~i~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 145 (581)
...+|+++=.+|..+.++.-=+ -.+++.+.+..+.-.+...++.+++--+. +...+ .-.+-+..++.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~cn~~p~-----------~~~~~~~~~~d~~~~i~ 254 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWP-GPSPRWLWILSLLRFLFIPLFLLCNVQPR-----------PRYLPVLFNSDAWFIIL 254 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEec-ccccccHHHHHHHHHHHHHHHHHHHhhcc-----------cccCCCcccchHHHHHH
Confidence 3456677777777766654211 01233444444444444444444321000 00000 01144566777
Q ss_pred HHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHHHHHH
Q 039943 146 LGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMVAVTC 201 (581)
Q Consensus 146 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 201 (581)
.+++|+..|-.......+..+..++ ++|..+-.+...+..+|-.+|..+
T Consensus 255 ~~l~g~TNGyl~tl~m~~~p~~v~~-------~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 255 MLLFGFTNGYLSTLAMMYAPKSVSP-------EERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------------HHHH----------------------------------------
T ss_pred HHHHHHccchhhhceeeeCCCcCCH-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888876 345555555555566666666543
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=47.63 E-value=1.4e+02 Score=33.13 Aligned_cols=92 Identities=13% Similarity=0.072 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeecccCCc----h--hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCcCCC
Q 039943 456 WVLPYHVLSGLAMAFNMIGQIEFYYSELPR----S--MSSIASALHGLGMSVASLVASFIMNAVDEITKRGGKEGWIPSN 529 (581)
Q Consensus 456 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~----~--~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~~~~~~~w~~~~ 529 (581)
.+...+-+.++|.+..-|...++-.++++. + ........+.+..++|..++..+..++.+.. +|
T Consensus 154 ~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~------~w---- 223 (571)
T KOG1237|consen 154 VLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV------GW---- 223 (571)
T ss_pred HHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc------cc----
Confidence 444456667778899999999999999882 2 2235566777888888888887777665433 55
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 039943 530 INKGRYDYYYWLLAGLNMASFIYFLACCKAYGPC 563 (581)
Q Consensus 530 ~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~ 563 (581)
...|.+.+++++++.++++...+.|+.+
T Consensus 224 ------~lgf~i~~~~~~lai~iF~~g~~~y~~~ 251 (571)
T KOG1237|consen 224 ------KLGFGIPTVLNALAILIFLPGFPFYRYK 251 (571)
T ss_pred ------eeeccHHHHHHHHHHHHHHcCceeEEee
Confidence 4457788888888888887777665543
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=38.25 E-value=2.7e+02 Score=27.47 Aligned_cols=45 Identities=13% Similarity=0.021 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHH
Q 039943 138 QLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWY 187 (581)
Q Consensus 138 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (581)
+...+++.-++.|+..=+.++..-- +...+++.++ ++-+..+|+.
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~ViL~-lPhEyK~~~p----k~ig~~Fg~i 247 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGVILN-LPHEYKGYNP----KKIGIQFGLI 247 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhc-ChhhhcCCCc----ceehhHHHHH
Confidence 4566777777777665555554444 3444555444 5556666553
No 299
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=37.90 E-value=3.5e+02 Score=25.37 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHhh---ccccCchhhHHHHHHHHHHHHHHHHH
Q 039943 68 LLIWTAATNFLPIIGAFLA---DSCVGRYPMIGFGCITYLLGVVLLWL 112 (581)
Q Consensus 68 ~~~~~~~~~i~~~~~G~la---Dr~~Grr~~~~~~~~~~~~~~~~~~~ 112 (581)
.....++..+|..+++.+. .+ ..+|+.....+++..+......+
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~-~~~~~~~~~~l~~~~~ll~~~~~ 98 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRR-RRRRRWYRILLLLEAILLLIAAL 98 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-cchhHHHHHHHHHHHHHHHHHHH
Confidence 4444555667777777772 23 24555555555554444444333
No 300
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=37.44 E-value=37 Score=33.31 Aligned_cols=145 Identities=11% Similarity=0.083 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhh-ccccCchh-hHHHHHHHHHHH
Q 039943 29 PFIIANEAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLA-DSCVGRYP-MIGFGCITYLLG 106 (581)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~la-Dr~~Grr~-~~~~~~~~~~~~ 106 (581)
..+.+..+..+........+++.|..++++++.+..+++-.+..+.++....+-.-+- .+ -|+| .+..|.+++..+
T Consensus 204 YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwng--krlKayYsaGgiiwifc 281 (412)
T KOG4830|consen 204 YQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNG--KRLKAYYSAGGIIWIFC 281 (412)
T ss_pred HHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCc--ceeeeeeecccHHHHHh
Confidence 4566667777777667778888888889998888888777766666665544432221 12 1333 344455544443
Q ss_pred HHHHHHhhhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHH
Q 039943 107 VVLLWLTTILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSW 186 (581)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (581)
...+.+-+ ...+ ...++--.++|++.+........+.+++..++. +.++-.+|-
T Consensus 282 ga~ilLlp--------------------r~i~-symyAisvfIGIAnAimlvtslsitavli~~~~-----~~~aFv~Ga 335 (412)
T KOG4830|consen 282 GAVILLLP--------------------RGIK-SYMYAISVFIGIANAIMLVTSLSITAVLINKNT-----ESGAFVYGA 335 (412)
T ss_pred hhheeecc--------------------cchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CCceEEEeh
Confidence 32222222 0111 223444556888888887777777777766644 334555554
Q ss_pred HHHHHhhHHHHHHHH
Q 039943 187 YYVSVLASSMVAVTC 201 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~ 201 (581)
....--+..+++.-+
T Consensus 336 mSF~DKlS~GiA~~l 350 (412)
T KOG4830|consen 336 MSFFDKLSNGIAYQL 350 (412)
T ss_pred HHHHHhhcccHHHHH
Confidence 444444555555444
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.04 E-value=2.4e+02 Score=23.59 Aligned_cols=35 Identities=9% Similarity=0.002 Sum_probs=27.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 039943 484 PRSMSSIASALHGLGMSVASLVASFIMNAVDEITK 518 (581)
Q Consensus 484 P~~~rg~~~g~~~~~~~ig~~i~~~i~~~i~~~~~ 518 (581)
-.+.++.++++-...-.+++++.....|++.|.+-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35667888888888888888888888888887543
No 302
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.75 E-value=1.7e+02 Score=24.13 Aligned_cols=25 Identities=8% Similarity=-0.100 Sum_probs=14.6
Q ss_pred HHHHHHHhhccccCchhhHHHHHHH
Q 039943 78 LPIIGAFLADSCVGRYPMIGFGCIT 102 (581)
Q Consensus 78 ~~~~~G~laDr~~Grr~~~~~~~~~ 102 (581)
...+.|..-|+.+|-++.+.+.+++
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 3445566666667877755544333
No 303
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=29.91 E-value=1e+02 Score=23.95 Aligned_cols=46 Identities=17% Similarity=0.288 Sum_probs=26.7
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 039943 187 YYVSVLASSMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSFFLASPF 235 (581)
Q Consensus 187 ~~~~~~~g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (581)
.+....++++++. +.|++.++ .+..+++.++..++++++.+.-.+.
T Consensus 13 ~~~il~~~~iisf-i~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~ 58 (76)
T PF06645_consen 13 MQYILIISAIISF-IVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHh
Confidence 3344556666665 56777764 5557777766666665554443333
No 304
>PRK01030 tetrahydromethanopterin S-methyltransferase subunit C; Provisional
Probab=29.42 E-value=5.5e+02 Score=25.11 Aligned_cols=31 Identities=6% Similarity=-0.136 Sum_probs=19.9
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039943 481 SELPRSMSSIASALHGLGMSVASLVASFIMN 511 (581)
Q Consensus 481 ~~~P~~~rg~~~g~~~~~~~ig~~i~~~i~~ 511 (581)
-.=|++.|.+...+..-+..+..++-..+.-
T Consensus 185 CLGP~E~q~RTL~la~e~G~ls~ii~gi~s~ 215 (264)
T PRK01030 185 CLGPNESQDRTLTLAVECGFLSMIIFGIASL 215 (264)
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3458877777777766666666666554443
No 305
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=27.18 E-value=6.4e+02 Score=27.05 Aligned_cols=114 Identities=11% Similarity=-0.047 Sum_probs=73.4
Q ss_pred HHHHHHHHhhhhhHHHHHhhhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccCch-hhHHHHHHHHHHHHHHHHHh
Q 039943 35 EAFERMASMGLMPNMILYLCGEYNMETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRY-PMIGFGCITYLLGVVLLWLT 113 (581)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr-~~~~~~~~~~~~~~~~~~~~ 113 (581)
.+---++.|+-....|.-..+.+|++.+|...+.+.-.+...+++++--....+ +|-| +.++.+.+.++...+.....
T Consensus 22 glQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~-~g~~lP~~lG~sFafi~p~i~~~~~ 100 (451)
T COG2233 22 GLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGP-GGSGLPSYLGSSFAFVAPMIAIGGT 100 (451)
T ss_pred HHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccC-cccCCCeeEechHHHHHHHHHHHhc
Confidence 333444556666667777778999999999999999999999999988764443 4544 66665555555444443333
Q ss_pred hhcccCCCCcccccccccccccchhHHHHHHHHHHHHHhccccchhhhhhhhhccCC
Q 039943 114 TILSQAQPPACDQLRSDCESATWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEK 170 (581)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 170 (581)
. + ......+.+.+..|+-.-...+.....+...||+
T Consensus 101 ~--g-------------------~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPP 136 (451)
T COG2233 101 T--G-------------------DGIAALLGGIIAAGLVYFLISPIVKIRLARLFPP 136 (451)
T ss_pred c--C-------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 0 1345566666666655544444333377888888
No 306
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=24.91 E-value=9.2e+02 Score=26.24 Aligned_cols=161 Identities=6% Similarity=-0.020 Sum_probs=87.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhccccCchhhH---------HHHHHHHHH-HHHHHHHhhhcccCCCCcccccc-
Q 039943 60 ETTAGTNVLLIWTAATNFLPIIGAFLADSCVGRYPMI---------GFGCITYLL-GVVLLWLTTILSQAQPPACDQLR- 128 (581)
Q Consensus 60 s~~~~~~i~~~~~~~~~i~~~~~G~laDr~~Grr~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 128 (581)
+..|+.-....+.++..++.+++|.+.-- +++++-. +-.+++... ..+++.+...+.+ +...++-.
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~-~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~--r~il~~~~f 254 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSW-LSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYIN--RNVLTDPLF 254 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHH-HhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhcccCcch
Confidence 56788888999999999999999888776 4652222 111221111 1122222211111 00011100
Q ss_pred -----cccccc--------------cchhHHHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHH
Q 039943 129 -----SDCESA--------------TWSQLMLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYV 189 (581)
Q Consensus 129 -----~~~~~~--------------~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (581)
.+.+.. ....+..+....+..|++.-......-+=+.+.+|..+ ++...++.+..
T Consensus 255 ~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~------~~~~f~~~~~~ 328 (509)
T COG3202 255 YLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTN------EYTAFMGRFQI 328 (509)
T ss_pred hHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChh------HHHHHHHHHHH
Confidence 011111 11122333444455566666666666777888888755 37777887766
Q ss_pred HHhhH-HHHHHHHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 039943 190 SVLAS-SMVAVTCIVYIQDNLGWKVGFGVPAVISLLSALSF 229 (581)
Q Consensus 190 ~~~~g-~~~~p~~~~~i~~~~g~~~~f~~~~~~~~i~~~~~ 229 (581)
..++- ..+.-..++-+....||-+.-.+.-+++++..+++
T Consensus 329 ~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lF 369 (509)
T COG3202 329 WTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLF 369 (509)
T ss_pred HHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 55555 44444557778888899877666555555554433
No 307
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=24.77 E-value=2.6e+02 Score=27.79 Aligned_cols=18 Identities=28% Similarity=0.146 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHHhccc
Q 039943 138 QLMLLYSALGLMSLGGGG 155 (581)
Q Consensus 138 ~~~~~~~~~~l~g~~~g~ 155 (581)
+.+.+.+..++.+++.++
T Consensus 22 ~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 22 YPWLLILVLALLTFFFGM 39 (284)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 445566666666665554
No 308
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=24.37 E-value=1.8e+02 Score=26.10 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhccccchhhhhhhhhccCCCCCcccchhhhHHHHHHHHHHhhHHHH
Q 039943 140 MLLYSALGLMSLGGGGIRSSSLAFGAEQLEKGDENKSKGALQSYFSWYYVSVLASSMV 197 (581)
Q Consensus 140 ~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 197 (581)
..+.....++|+|.-+ +.+..++.-.++ ++-|+.+|+-.+-.|++-+.
T Consensus 98 ~~~~~S~~~Fg~gllG---isYGilSaSWD~-------~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 98 AVLLVSLVFFGLGLLG---ISYGILSASWDP-------EREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHHHh---hhhhhcccccCC-------CCCCCcccHHHHHHhHHHHH
Confidence 3344444444444322 233334444555 45788888888877776553
No 309
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.77 E-value=3.2e+02 Score=26.81 Aligned_cols=28 Identities=11% Similarity=0.060 Sum_probs=18.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 039943 485 RSMSSIASALHGLGMSVASLVASFIMNA 512 (581)
Q Consensus 485 ~~~rg~~~g~~~~~~~ig~~i~~~i~~~ 512 (581)
+-+|..+.|+..+.....+.+.....+.
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~gr 101 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGR 101 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 5556677777666777767766666553
No 310
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.63 E-value=3.5e+02 Score=33.08 Aligned_cols=17 Identities=12% Similarity=0.059 Sum_probs=7.3
Q ss_pred HHHHHHHHHHhhhcccc
Q 039943 194 SSMVAVTCIVYIQDNLG 210 (581)
Q Consensus 194 g~~~~p~~~~~i~~~~g 210 (581)
|+++|..+..++...+|
T Consensus 143 GGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 44444444444433333
No 311
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.94 E-value=1.8e+02 Score=23.52 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=16.4
Q ss_pred HHHHHHhhHHHHHHHHHHhhhccccch
Q 039943 186 WYYVSVLASSMVAVTCIVYIQDNLGWK 212 (581)
Q Consensus 186 ~~~~~~~~g~~~~p~~~~~i~~~~g~~ 212 (581)
++.....+|+++|.+ -|+..+.++|.
T Consensus 27 ~~q~ilti~aiVg~i-~Gf~~Qqls~t 52 (101)
T KOG4112|consen 27 FQQLILTIGAIVGFI-YGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 334456677887764 56666667763
Done!