Query 039949
Match_columns 147
No_of_seqs 101 out of 1025
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 05:13:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1afh_A Maize nonspecific lipid 99.6 2.2E-17 7.6E-22 115.0 0.1 79 36-118 2-92 (93)
2 2ljo_A Non-specific lipid-tran 99.6 1.6E-17 5.5E-22 116.0 -0.6 81 35-118 1-91 (93)
3 1t12_A LTP 1, nonspecific lipi 99.6 3.5E-17 1.2E-21 113.7 -0.2 77 36-118 2-90 (91)
4 1bwo_A NS-LTP1, nonspecific li 99.6 4E-17 1.4E-21 113.1 -0.4 76 37-117 2-89 (90)
5 1siy_A LTP 1, NS-LTP1, nonspec 99.6 1.1E-16 3.8E-21 111.0 1.4 77 37-118 2-90 (91)
6 2alg_A Non-specific lipid tran 99.6 5.3E-17 1.8E-21 112.9 -1.1 78 36-118 2-91 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.5 3.9E-16 1.3E-20 105.0 -0.4 72 35-111 2-74 (77)
8 1n89_A Lipid transfer protein; 99.4 1.3E-14 4.6E-19 95.3 0.9 61 43-111 5-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.4 1.5E-14 5.1E-19 95.6 0.9 64 42-115 5-68 (69)
10 1hyp_A Hydrophobic protein fro 94.6 0.0094 3.2E-07 40.0 0.9 67 44-117 10-79 (80)
11 3ob4_A Conglutin, maltose ABC 93.4 0.0032 1.1E-07 53.6 -4.1 54 61-117 429-490 (500)
12 1s6d_A Albumin 8; all helix, f 88.3 0.14 4.7E-06 35.5 1.0 74 34-110 7-98 (103)
13 1pnb_B Napin BNIB; napin IA an 84.6 0.2 6.8E-06 32.8 0.1 56 58-117 9-72 (75)
14 1sm7_A Recombinant IB pronapin 79.4 0.24 8.3E-06 34.4 -1.0 75 38-116 5-105 (109)
15 1hss_A 0.19 alpha-amylase inhi 79.2 0.34 1.2E-05 34.8 -0.3 65 44-111 16-104 (124)
16 1bea_A Bifunctional amylase/se 77.6 2 6.8E-05 30.9 3.4 72 44-118 16-118 (127)
17 1b1u_A Protein (alpha-amylase/ 75.0 0.89 3E-05 32.5 0.9 71 44-117 16-116 (122)
18 1w2q_A Conglutin, ARA H 6; all 70.8 0.77 2.6E-05 33.0 -0.3 82 34-117 12-119 (127)
19 2ds2_B Sweet protein mabinlin- 27.7 13 0.00044 23.8 0.0 53 61-117 8-69 (72)
20 2lvf_A 2S albumin; allergen, c 21.5 19 0.00064 25.0 -0.1 78 35-117 5-107 (114)
No 1
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.63 E-value=2.2e-17 Score=115.00 Aligned_cols=79 Identities=25% Similarity=0.590 Sum_probs=63.9
Q ss_pred CCchhhhccccCchhhhcCCCCCCChhhHHHHHhhcCC-------CccccccccccCCCCCCCCCCCHHHHhhcccCCCC
Q 039949 36 KECGDQLADFSACLPFVGGKAKSPTPTCCSNITKEGSK-------TRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHA 108 (147)
Q Consensus 36 ~~C~~~~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~-------~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv 108 (147)
.+|+.++..|.||++|++|++..|++.||++++++++. +..|+| ++..... ++ +||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~~-~~-~in~~~A~~LP~~C~v 77 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAG-VS-GLNAGNAASIPSKCGV 77 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHTT-ST-TCCHHHHHHHHHHHHC
T ss_pred CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe--ecccccc-cc-CcCHHHHHHHHHHcCC
Confidence 57999999999999999987778999999999999631 268999 4443222 43 6999999999999999
Q ss_pred CC--CCC---CCCCC
Q 039949 109 PA--KVS---DCPAL 118 (147)
Q Consensus 109 ~~--~~s---~C~~~ 118 (147)
+. +++ ||+++
T Consensus 78 ~~p~~is~~~dC~~v 92 (93)
T 1afh_A 78 SIPYTISTSTDCSRV 92 (93)
T ss_dssp CCSSCCSTTCCSSSC
T ss_pred CCCCCCCCCCCCccC
Confidence 75 454 99874
No 2
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.63 E-value=1.6e-17 Score=115.97 Aligned_cols=81 Identities=28% Similarity=0.576 Sum_probs=66.8
Q ss_pred CCCchhhhccccCchhhhcCCCCCCChhhHHHHHhhcCC-----CccccccccccCCCCCCCCCCCHHHHhhcccCCCCC
Q 039949 35 RKECGDQLADFSACLPFVGGKAKSPTPTCCSNITKEGSK-----TRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHAP 109 (147)
Q Consensus 35 ~~~C~~~~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~-----~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv~ 109 (147)
+.+|++++..|.||++|++|+ ..|++.||++++++++. ++.|+|+.|++.+.. ..+||.++|+.||.+||++
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~-~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~--~~~in~~~a~~LP~~CgV~ 77 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGG-PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGS--ITKLNTNNAAALPGKCGVN 77 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTS-SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGG--CTTCCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhHHHHHcCC-CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhc--cCCcCHHHHHhhhHhcCCC
Confidence 358999999999999999984 57999999999999764 357888889886543 3459999999999999997
Q ss_pred C--CCC---CCCCC
Q 039949 110 A--KVS---DCPAL 118 (147)
Q Consensus 110 ~--~~s---~C~~~ 118 (147)
. +|| ||+++
T Consensus 78 ~p~~Is~~~dC~~v 91 (93)
T 2ljo_A 78 IPYKISTTTNCNTV 91 (93)
T ss_dssp CSSCCSTTCCGGGC
T ss_pred CCCCCCCCCCCCCC
Confidence 6 454 89875
No 3
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.61 E-value=3.5e-17 Score=113.67 Aligned_cols=77 Identities=23% Similarity=0.522 Sum_probs=63.3
Q ss_pred CCchhhhccccCchhhhcCCCCCCChhhHHHHHhhcCC-------CccccccccccCCCCCCCCCCCHHHHhhcccCCCC
Q 039949 36 KECGDQLADFSACLPFVGGKAKSPTPTCCSNITKEGSK-------TRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHA 108 (147)
Q Consensus 36 ~~C~~~~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~-------~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv 108 (147)
.+|+.++..|.||++|++|++. |+ .||++++++++. ++.|+| +++.+.. ++ +||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~-~~-~in~~~A~~LP~~C~v 75 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGA-IS-GINLGKAAGLPSTCGV 75 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHH-CT-TCCHHHHHHHHHHTTC
T ss_pred CChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccc-cC-CcChhHHHHHHHHcCC
Confidence 5799999999999999998766 88 999999999764 479999 5654322 43 6999999999999999
Q ss_pred CC--CCC---CCCCC
Q 039949 109 PA--KVS---DCPAL 118 (147)
Q Consensus 109 ~~--~~s---~C~~~ 118 (147)
+. +|+ ||+++
T Consensus 76 ~~p~~is~~~dC~~v 90 (91)
T 1t12_A 76 NIPYKISPSTDCSKV 90 (91)
T ss_dssp CCSSCSSSSSCCTTC
T ss_pred CCCCCCCCCCCCccC
Confidence 76 454 99874
No 4
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.61 E-value=4e-17 Score=113.11 Aligned_cols=76 Identities=25% Similarity=0.539 Sum_probs=62.1
Q ss_pred CchhhhccccCchhhhcCCCCCCChhhHHHHHhhcCC-------CccccccccccCCCCCCCCCCCHHHHhhcccCCCCC
Q 039949 37 ECGDQLADFSACLPFVGGKAKSPTPTCCSNITKEGSK-------TRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHAP 109 (147)
Q Consensus 37 ~C~~~~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~-------~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv~ 109 (147)
+|+.++..|.||++|++|++. |++.||++++++++. +..|+| +++.+.. ++ +||.++|++||++||++
T Consensus 2 ~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~-~~-~in~~~A~~LP~~C~v~ 76 (90)
T 1bwo_A 2 DCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARG-IH-NLNEDNARSIPPKCGVN 76 (90)
T ss_dssp CHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTT-CT-TCCHHHHHTHHHHHTCC
T ss_pred CHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhc-cC-CcCHHHHHHHHHHcCCC
Confidence 699999999999999998665 999999999998742 368999 6654332 33 69999999999999997
Q ss_pred C--CCC---CCCC
Q 039949 110 A--KVS---DCPA 117 (147)
Q Consensus 110 ~--~~s---~C~~ 117 (147)
+ +++ ||++
T Consensus 77 ~p~~is~~~dC~~ 89 (90)
T 1bwo_A 77 LPYTISLNIDCSR 89 (90)
T ss_dssp CSSCCCTTCCGGG
T ss_pred CCCCCCCCCCCCC
Confidence 6 454 8875
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.60 E-value=1.1e-16 Score=111.00 Aligned_cols=77 Identities=22% Similarity=0.530 Sum_probs=62.8
Q ss_pred CchhhhccccCchhhhcCCCCCCChhhHHHHHhhcCC-------CccccccccccCCCCCCCCCCCHHHHhhcccCCCCC
Q 039949 37 ECGDQLADFSACLPFVGGKAKSPTPTCCSNITKEGSK-------TRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHAP 109 (147)
Q Consensus 37 ~C~~~~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~-------~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv~ 109 (147)
+|+.++..|.||++|++|++. |++.||++++++++. +..|+| +++.+.. ++ +||.++|++||++||++
T Consensus 2 ~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~-~~-~in~~~A~~LP~~Cgv~ 76 (91)
T 1siy_A 2 TCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGA-VR-GINPNNAEALPGKCGVN 76 (91)
T ss_dssp CTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTC-CS-SCCHHHHHHHHHHHTCC
T ss_pred CHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccc-cC-CcCHHHHHHHHHHcCCC
Confidence 699999999999999998665 999999999998653 358999 5654322 43 69999999999999997
Q ss_pred C--CCC---CCCCC
Q 039949 110 A--KVS---DCPAL 118 (147)
Q Consensus 110 ~--~~s---~C~~~ 118 (147)
+ +++ ||+++
T Consensus 77 ~p~~is~~~dC~~v 90 (91)
T 1siy_A 77 IPYKISTSTNCNSI 90 (91)
T ss_dssp CSSCSCTTSCSSTT
T ss_pred CCCCCCCCCCCccC
Confidence 5 454 99874
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.59 E-value=5.3e-17 Score=112.88 Aligned_cols=78 Identities=26% Similarity=0.606 Sum_probs=62.7
Q ss_pred CCchhhhccccCchhhhcCCCCCCChhhHHHHHhhc-------CCCccccccccccCCCCCCCCCCCHHHHhhcccCCCC
Q 039949 36 KECGDQLADFSACLPFVGGKAKSPTPTCCSNITKEG-------SKTRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHA 108 (147)
Q Consensus 36 ~~C~~~~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~-------~~~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv 108 (147)
.+|+.+++.|.||++|++|++ .|++.||+++++++ +.++.|+|.+... +.++ +||.++|++||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~---~~~~-~in~~~A~~LP~~Cgv 76 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS---ASVP-GVNPNNAAALPGKCGV 76 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH---HHST-TCCHHHHHHHHHHTTC
T ss_pred CChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc---cccC-ccChHHHHHHHHHcCC
Confidence 479999999999999999754 58999999999987 3347899964322 2244 6999999999999999
Q ss_pred CC--CCC---CCCCC
Q 039949 109 PA--KVS---DCPAL 118 (147)
Q Consensus 109 ~~--~~s---~C~~~ 118 (147)
++ +++ ||+++
T Consensus 77 ~~p~~is~~~dC~~v 91 (92)
T 2alg_A 77 SIPYKISASTNCATV 91 (92)
T ss_dssp CCSSCSSTTSCGGGC
T ss_pred CCCCCCCCCCCCccC
Confidence 76 454 88874
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.54 E-value=3.9e-16 Score=104.98 Aligned_cols=72 Identities=24% Similarity=0.468 Sum_probs=59.4
Q ss_pred CCCchhhhccccCchhhhcC-CCCCCChhhHHHHHhhcCCCccccccccccCCCCCCCCCCCHHHHhhcccCCCCCCC
Q 039949 35 RKECGDQLADFSACLPFVGG-KAKSPTPTCCSNITKEGSKTRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHAPAK 111 (147)
Q Consensus 35 ~~~C~~~~~~L~pC~~yv~g-~~~~Ps~~CC~al~~~~~~~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv~~~ 111 (147)
..+|+.++.+|.||++|+++ ....|++.||+++++. ++.|||.++++.... .++||+++|++||++||+++|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~---~~~ClC~~~~~~~~~--~~gin~~~A~~LP~~Cgv~~p 74 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA---DFACLCGYKNSPWLG--SFGVDPELASALPKQCGLANA 74 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC---CHHHHHTTTTCHHHH--HHTBCHHHHHHHHHHTTCSCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc---CcCCcCcccCCcchh--hcCcCHHHHHHHHHHcCCCCC
Confidence 35799999999999999997 3578999999999983 579999988752112 234999999999999999875
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.44 E-value=1.3e-14 Score=95.30 Aligned_cols=61 Identities=18% Similarity=0.410 Sum_probs=52.7
Q ss_pred ccccCchhhhcCCCCCCChhhHHHHHhhcCCCccccccccccCCCCCCCCCCCHHHHhhcccCCCCCCC
Q 039949 43 ADFSACLPFVGGKAKSPTPTCCSNITKEGSKTRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHAPAK 111 (147)
Q Consensus 43 ~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv~~~ 111 (147)
++|.||++|++++ ..|+++||++|++. ..|+|+|+++. .++.+||.++|++||++||+++|
T Consensus 5 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~----~~ClC~~~k~~---~~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSG-AKPSGECCGNLRAQ----QGCFCQYAKDP---TYGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTC-CCCCHHHHHHHHHH----SSHHHHGGGCS---TTHHHHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC----CCCCCccccCc---ccccccCHHHHHHHHHHcCCCCC
Confidence 5899999999974 57999999999985 68999999874 24445999999999999999875
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.43 E-value=1.5e-14 Score=95.57 Aligned_cols=64 Identities=27% Similarity=0.542 Sum_probs=54.1
Q ss_pred hccccCchhhhcCCCCCCChhhHHHHHhhcCCCccccccccccCCCCCCCCCCCHHHHhhcccCCCCCCCCCCC
Q 039949 42 LADFSACLPFVGGKAKSPTPTCCSNITKEGSKTRKCLCLLVKDRNDPRHGFKMNATLALSLPSVRHAPAKVSDC 115 (147)
Q Consensus 42 ~~~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~~~~ClC~~l~~~~~~~~g~~in~~~a~~LP~~Cgv~~~~s~C 115 (147)
.++|.||++|++++ ..|+++||++|++. ..|+|+|+++. .++.+||.++|++||++||+++| +|
T Consensus 5 ~~~L~pC~~~v~~~-~~Ps~~CC~~lk~~----~~ClC~~~k~~---~~~~~in~~~A~~Lp~~Cgv~~P--~C 68 (69)
T 1l6h_A 5 AGQLTVCTGAIAGG-ARPTAACCSSLRAQ----QGCFCQFAKDP---RYGRYVNSPNARKAVSSCGIALP--TC 68 (69)
T ss_dssp TTTHHHHHHHHTTC-CSTTHHHHHHHHHH----HHHHHHHTTCS---SHHHHTTTTTGGGCCCCCSSCSC--CC
T ss_pred hhhcccCHHHHcCC-CCCCHHHHHhhCCC----CCCCCccccCc---ccccccCHHHHHHHHHHcCCCCC--CC
Confidence 35899999999974 57999999999985 68999999874 24446999999999999999875 55
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=94.57 E-value=0.0094 Score=39.97 Aligned_cols=67 Identities=27% Similarity=0.569 Sum_probs=49.8
Q ss_pred cccCchhhhcCCCCCCChhhHHHHHhhcCCC-ccccccccccCCCCCCCCCCCHHHHhh-cccCCCCCCC-CCCCCC
Q 039949 44 DFSACLPFVGGKAKSPTPTCCSNITKEGSKT-RKCLCLLVKDRNDPRHGFKMNATLALS-LPSVRHAPAK-VSDCPA 117 (147)
Q Consensus 44 ~L~pC~~yv~g~~~~Ps~~CC~al~~~~~~~-~~ClC~~l~~~~~~~~g~~in~~~a~~-LP~~Cgv~~~-~s~C~~ 117 (147)
+|-.|.+-+.|. ..|...||+-++.+.+.+ ..|+|..+|- +|+ +|....+. |-+.||...| ..+|..
T Consensus 10 kLgvCanvL~g~-~~~~~~CC~Ll~GL~dleAAvCLCtaik~-----Lgi-lnlpv~L~llln~Cgk~~P~gF~C~~ 79 (80)
T 1hyp_A 10 DLSICLNILGGS-LGTVDDCCALIGGLGDIEAIVCLCIQLRA-----LGI-LNLNRNLQLILNSCGRSYPSNATCPR 79 (80)
T ss_dssp CCGGGGGGGGTC-CTTHHHHHHHHHTSCHHHHHHHHHHHHHH-----HTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred chhHHHHHhCcC-CCCCCccchhhhCcchhhhhhhhhhhccc-----cce-eecChhHHHHHHHhCCcCcCCCCCCC
Confidence 688899988753 337789999999997653 6899988872 465 67766665 4578999874 458863
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=93.35 E-value=0.0032 Score=53.58 Aligned_cols=54 Identities=15% Similarity=0.387 Sum_probs=37.0
Q ss_pred hhhHHHHHhhcCCCccccccccccCCCCCC--------CCCCCHHHHhhcccCCCCCCCCCCCCC
Q 039949 61 PTCCSNITKEGSKTRKCLCLLVKDRNDPRH--------GFKMNATLALSLPSVRHAPAKVSDCPA 117 (147)
Q Consensus 61 ~~CC~al~~~~~~~~~ClC~~l~~~~~~~~--------g~~in~~~a~~LP~~Cgv~~~~s~C~~ 117 (147)
..||+.|+.+-+ .+.|.|..|+....... ...+ ..+|..||..||+.. +..|+-
T Consensus 429 ~~cc~~l~~~~~-~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~-~~~c~~ 490 (500)
T 3ob4_A 429 ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRA-PQRCDL 490 (500)
T ss_dssp HHHHHHHGGGTT-CHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCC-CSCCCC
T ss_pred HHHHHHHHhCCc-ccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCC-CccCCc
Confidence 799999998821 28999999876432110 1112 345899999999974 357885
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=88.32 E-value=0.14 Score=35.54 Aligned_cols=74 Identities=15% Similarity=0.293 Sum_probs=50.9
Q ss_pred CCCCchhhhc--c-ccCchhhhcCCC------------CCCChhhHHHHHhhcCCCccccccccccCCCCCC-CC--CCC
Q 039949 34 GRKECGDQLA--D-FSACLPFVGGKA------------KSPTPTCCSNITKEGSKTRKCLCLLVKDRNDPRH-GF--KMN 95 (147)
Q Consensus 34 ~~~~C~~~~~--~-L~pC~~yv~g~~------------~~Ps~~CC~al~~~~~~~~~ClC~~l~~~~~~~~-g~--~in 95 (147)
....|...+. . |.+|..||.... ...-..||..++.+ +..|.|..|+......+ |- .--
T Consensus 7 ~~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~ 83 (103)
T 1s6d_A 7 TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQV 83 (103)
T ss_dssp CSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHH
T ss_pred CCcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHH
Confidence 4556877763 5 889999997320 12458999999997 68999999976542222 21 112
Q ss_pred HHHHhhcccCCCCCC
Q 039949 96 ATLALSLPSVRHAPA 110 (147)
Q Consensus 96 ~~~a~~LP~~Cgv~~ 110 (147)
..+|..||..||++.
T Consensus 84 ~q~A~~LP~~C~i~p 98 (103)
T 1s6d_A 84 MSMAHNLPIECNLMS 98 (103)
T ss_dssp HHHHHHHHHHTTSSS
T ss_pred HHHHHhcHHhcCCCc
Confidence 446778999999963
No 13
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=84.55 E-value=0.2 Score=32.76 Aligned_cols=56 Identities=25% Similarity=0.541 Sum_probs=37.6
Q ss_pred CCChhhHHHHHhhcCCCccccccccccCCC-----CCCCC---CCCHHHHhhcccCCCCCCCCCCCCC
Q 039949 58 SPTPTCCSNITKEGSKTRKCLCLLVKDRND-----PRHGF---KMNATLALSLPSVRHAPAKVSDCPA 117 (147)
Q Consensus 58 ~Ps~~CC~al~~~~~~~~~ClC~~l~~~~~-----~~~g~---~in~~~a~~LP~~Cgv~~~~s~C~~ 117 (147)
..-..||+.|+.+ ++.|.|..|+.... ..++. .--..+|..||..||+.. +..|.-
T Consensus 9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~-~~~C~~ 72 (75)
T 1pnb_B 9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-IGTCPF 72 (75)
T ss_dssp SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTT-TCCCCC
T ss_pred HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCC-CCCCCc
Confidence 4568999999997 68999999876421 00111 112456778999999964 246653
No 14
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=79.45 E-value=0.24 Score=34.38 Aligned_cols=75 Identities=23% Similarity=0.590 Sum_probs=46.5
Q ss_pred chhhhcc---ccCchhhhcC----CC--CCC---------ChhhHHHHHhhcCCCccccccccccCCCCC-----CCC--
Q 039949 38 CGDQLAD---FSACLPFVGG----KA--KSP---------TPTCCSNITKEGSKTRKCLCLLVKDRNDPR-----HGF-- 92 (147)
Q Consensus 38 C~~~~~~---L~pC~~yv~g----~~--~~P---------s~~CC~al~~~~~~~~~ClC~~l~~~~~~~-----~g~-- 92 (147)
|...+.. |.+|..|+.. .. ..| -..||..++.+ +..|.|..|+...... ++.
T Consensus 5 C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~ 81 (109)
T 1sm7_A 5 CQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQ 81 (109)
T ss_dssp HHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTH
T ss_pred hHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHH
Confidence 4444443 8899999972 11 111 36899999997 6899999986532110 110
Q ss_pred -CCCHHHHhhcccCCCCCCCCCCCC
Q 039949 93 -KMNATLALSLPSVRHAPAKVSDCP 116 (147)
Q Consensus 93 -~in~~~a~~LP~~Cgv~~~~s~C~ 116 (147)
.-...+|..||..||+.. +..|.
T Consensus 82 ~~~~~~~a~~LP~~Cnl~~-~~~C~ 105 (109)
T 1sm7_A 82 STRIYQIAKNLPNVCNMKQ-IGTCP 105 (109)
T ss_dssp HHHHHHTTSSHHHHSCCCS-SCSSC
T ss_pred HHHHHHHHHhCHHhcCCCC-CCCCC
Confidence 011334678999999963 24565
No 15
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=79.16 E-value=0.34 Score=34.83 Aligned_cols=65 Identities=25% Similarity=0.500 Sum_probs=41.5
Q ss_pred cccCchhhhcCC---CCCC---ChhhHHHHHhhcCCCccccccccccCCC---CCCC----------C-----CCCHHHH
Q 039949 44 DFSACLPFVGGK---AKSP---TPTCCSNITKEGSKTRKCLCLLVKDRND---PRHG----------F-----KMNATLA 99 (147)
Q Consensus 44 ~L~pC~~yv~g~---~~~P---s~~CC~al~~~~~~~~~ClC~~l~~~~~---~~~g----------~-----~in~~~a 99 (147)
.|..|..||... ...| -..||..|+++ +..|.|..|..... ...| + .+-..+|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A 92 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA 92 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence 467799998621 1112 46799999997 58999998865331 0011 0 0112257
Q ss_pred hhcccCCCCCCC
Q 039949 100 LSLPSVRHAPAK 111 (147)
Q Consensus 100 ~~LP~~Cgv~~~ 111 (147)
..||..||+..+
T Consensus 93 ~~LP~~Cnl~~~ 104 (124)
T 1hss_A 93 ASITAVCRLPIV 104 (124)
T ss_dssp TTHHHHTTCCEE
T ss_pred HhchhhcCCCCC
Confidence 889999999764
No 16
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=77.63 E-value=2 Score=30.86 Aligned_cols=72 Identities=18% Similarity=0.334 Sum_probs=46.1
Q ss_pred cccCchhhhcC----CCC-CC----ChhhHHHHHhhcCCCccccccccccCCCCC--------C-CC-CCC--------H
Q 039949 44 DFSACLPFVGG----KAK-SP----TPTCCSNITKEGSKTRKCLCLLVKDRNDPR--------H-GF-KMN--------A 96 (147)
Q Consensus 44 ~L~pC~~yv~g----~~~-~P----s~~CC~al~~~~~~~~~ClC~~l~~~~~~~--------~-g~-~in--------~ 96 (147)
.|..|..||.. .+. .| -..||+.|+++ .+.|.|..|....... . |. ..- .
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~ 92 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR 92 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence 46779999962 221 23 34699999997 5899999885532110 0 11 011 3
Q ss_pred HHHhhc--ccCCCCCC-CCC-CCCCC
Q 039949 97 TLALSL--PSVRHAPA-KVS-DCPAL 118 (147)
Q Consensus 97 ~~a~~L--P~~Cgv~~-~~s-~C~~~ 118 (147)
..|..| |..||+.. +.+ .|..+
T Consensus 93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~~ 118 (127)
T 1bea_A 93 GFAATLVTEAECNLATISGVAECPWI 118 (127)
T ss_dssp HHHTTTTSTTTTCCCCTTSSSCCTTT
T ss_pred HHHHhcCCcccCCCCCCCCCCCCCcc
Confidence 357889 99999987 233 78774
No 17
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=74.99 E-value=0.89 Score=32.48 Aligned_cols=71 Identities=15% Similarity=0.224 Sum_probs=45.3
Q ss_pred cccCchhhhcCC----CC-CC----ChhhHHHHHhhcCCCccccccccccCCCCCC-----------CCC------CCHH
Q 039949 44 DFSACLPFVGGK----AK-SP----TPTCCSNITKEGSKTRKCLCLLVKDRNDPRH-----------GFK------MNAT 97 (147)
Q Consensus 44 ~L~pC~~yv~g~----~~-~P----s~~CC~al~~~~~~~~~ClC~~l~~~~~~~~-----------g~~------in~~ 97 (147)
.|..|..||... +. .| -..||+.|+++ ++.|.|..|.......+ +.. .-..
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~ 92 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA 92 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence 477899999632 11 23 35799999997 58999998865432100 100 1113
Q ss_pred HHhhc--ccCCCCCCC-C-CCCCC
Q 039949 98 LALSL--PSVRHAPAK-V-SDCPA 117 (147)
Q Consensus 98 ~a~~L--P~~Cgv~~~-~-s~C~~ 117 (147)
.|..| |..||++.+ . ..|..
T Consensus 93 ~A~~Lv~P~~Cnl~~~~g~~~C~~ 116 (122)
T 1b1u_A 93 FAPKLVTEVECNLATIHGGPFCLS 116 (122)
T ss_dssp HGGGTTSTTTTCCCCTTSSSCCSS
T ss_pred HHHhcCCcccCCCCCCCCCccccc
Confidence 57889 999999873 2 26665
No 18
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=70.79 E-value=0.77 Score=32.96 Aligned_cols=82 Identities=18% Similarity=0.408 Sum_probs=53.3
Q ss_pred CCCCchhhh--ccccCchhhhcCC---CC-------CC-------ChhhHHHHHhhcCCCccccccccccCC----CCCC
Q 039949 34 GRKECGDQL--ADFSACLPFVGGK---AK-------SP-------TPTCCSNITKEGSKTRKCLCLLVKDRN----DPRH 90 (147)
Q Consensus 34 ~~~~C~~~~--~~L~pC~~yv~g~---~~-------~P-------s~~CC~al~~~~~~~~~ClC~~l~~~~----~~~~ 90 (147)
....|...+ ..|.+|..||... .. .. -..||..|+.+. .++.|.|..|+..+ ...-
T Consensus 12 ~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~ 90 (127)
T 1w2q_A 12 DSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQ 90 (127)
T ss_dssp TTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTT
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhh
Confidence 345687765 4689999999741 10 11 278999999973 35899999997654 1111
Q ss_pred CCCCC---HHHHhhcccCCCCCCCCCCCCC
Q 039949 91 GFKMN---ATLALSLPSVRHAPAKVSDCPA 117 (147)
Q Consensus 91 g~~in---~~~a~~LP~~Cgv~~~~s~C~~ 117 (147)
+-.+. ..+|..||..|++..+ ..|.-
T Consensus 91 gqq~~~~~~q~A~~LP~~C~i~~~-~~C~~ 119 (127)
T 1w2q_A 91 DRQMVQQFKRELMSLPQQCNFRAP-QRCDL 119 (127)
T ss_dssp TSTTHHHHHHHHHHHHHHHTCCCS-SCCSC
T ss_pred hHHHHHHHHHHHHHhHHhcCCCCC-CcCCC
Confidence 22222 3568899999999432 35653
No 19
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=27.75 E-value=13 Score=23.80 Aligned_cols=53 Identities=23% Similarity=0.652 Sum_probs=36.0
Q ss_pred hhhHHHHHhhcCCCccccccccccCCC-----CC-CC---CCCCHHHHhhcccCCCCCCCCCCCCC
Q 039949 61 PTCCSNITKEGSKTRKCLCLLVKDRND-----PR-HG---FKMNATLALSLPSVRHAPAKVSDCPA 117 (147)
Q Consensus 61 ~~CC~al~~~~~~~~~ClC~~l~~~~~-----~~-~g---~~in~~~a~~LP~~Cgv~~~~s~C~~ 117 (147)
..||+.|+.+ ++.|.|..|+.... .. ++ ..-...+|..||..||+.. +..|.-
T Consensus 8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~-~~~C~~ 69 (72)
T 2ds2_B 8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-IGACPF 69 (72)
T ss_dssp HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT-CCCCCC
T ss_pred HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC-CCcCCC
Confidence 5799999987 78999999876531 00 11 0123566788999999963 245653
No 20
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=21.52 E-value=19 Score=24.97 Aligned_cols=78 Identities=22% Similarity=0.450 Sum_probs=48.7
Q ss_pred CCCchhhh---ccccCchhhhc----C-CCCC-CC-------hhhHHHHHhhcCCCccccccccccCCCCC------C-C
Q 039949 35 RKECGDQL---ADFSACLPFVG----G-KAKS-PT-------PTCCSNITKEGSKTRKCLCLLVKDRNDPR------H-G 91 (147)
Q Consensus 35 ~~~C~~~~---~~L~pC~~yv~----g-~~~~-Ps-------~~CC~al~~~~~~~~~ClC~~l~~~~~~~------~-g 91 (147)
...|...+ ..|..|..||. + .... .. ..||+.|+.+ ++.|.|..|+..+... + +
T Consensus 5 ~q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~ 81 (114)
T 2lvf_A 5 QEECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRG 81 (114)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred hHhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhh
Confidence 34566543 24788999986 1 1111 11 4599999998 7899999886543210 1 1
Q ss_pred CC--CCHHHHhhcccCCCCCCCCCCCCC
Q 039949 92 FK--MNATLALSLPSVRHAPAKVSDCPA 117 (147)
Q Consensus 92 ~~--in~~~a~~LP~~Cgv~~~~s~C~~ 117 (147)
-. ==...|..||..||+.. ..|.-
T Consensus 82 ~~~~~~~q~A~~LP~~C~i~p--~~C~f 107 (114)
T 2lvf_A 82 EQMRRMMRLAENIPSRCNLSP--MRCPM 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHHCCCC--SCCTT
T ss_pred hHHHHHHHHHHhChHhcCCCc--ccCCC
Confidence 00 00346789999999973 56775
Done!