Query 039950
Match_columns 221
No_of_seqs 126 out of 1176
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:14:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 5E-47 1.7E-51 334.3 20.9 200 1-206 232-434 (439)
2 2rkv_A Trichothecene 3-O-acety 100.0 3.8E-43 1.3E-47 310.2 16.0 206 1-214 232-447 (451)
3 2xr7_A Malonyltransferase; xen 100.0 1E-42 3.5E-47 307.7 14.9 189 1-206 241-444 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 8E-43 2.7E-47 308.6 12.2 189 1-206 247-444 (454)
5 2bgh_A Vinorine synthase; VS, 100.0 6.9E-42 2.4E-46 300.0 14.7 193 1-213 217-414 (421)
6 3fot_A 15-O-acetyltransferase; 96.0 0.015 5.2E-07 51.8 7.2 77 2-80 281-362 (519)
7 1q9j_A PAPA5, polyketide synth 95.7 0.1 3.4E-06 44.2 10.9 98 2-107 215-314 (422)
8 1l5a_A Amide synthase, VIBH; n 91.3 1.3 4.6E-05 37.3 9.9 95 2-108 212-306 (436)
9 2jgp_A Tyrocidine synthetase 3 89.5 1.7 5.9E-05 37.8 9.2 95 2-107 307-401 (520)
10 2xhg_A Tyrocidine synthetase A 88.4 4.9 0.00017 34.1 11.2 100 2-108 237-337 (466)
11 4hvm_A Tlmii; PSI-biology, mid 85.4 1.4 4.9E-05 38.0 6.1 100 2-108 219-329 (493)
12 2vsq_A Surfactin synthetase su 79.7 9.8 0.00034 37.3 10.1 98 2-108 232-329 (1304)
13 2xl1_A Arginine attenuator pep 61.5 5.5 0.00019 19.2 1.8 18 23-40 7-24 (26)
14 1x93_A Hypothetical protein HP 54.9 20 0.0007 20.7 3.8 25 2-26 5-29 (55)
15 2k1o_A Putative; repressor, tr 32.3 44 0.0015 20.0 2.9 36 2-43 19-54 (66)
16 2ki0_A DS119; beta-alpha-beta, 27.0 55 0.0019 16.8 2.3 14 6-19 13-26 (36)
17 4ard_A Capsid protein P27; vir 22.7 79 0.0027 21.8 3.3 38 5-43 1-48 (116)
18 1clv_I Protein (alpha-amylase 22.7 24 0.00083 17.7 0.5 9 67-75 23-31 (32)
19 2ba3_A NIKA; dimer, bacterial 22.3 78 0.0027 17.8 2.8 21 2-22 19-39 (51)
20 2p63_A Cell division control p 21.0 32 0.0011 20.2 0.8 34 67-105 21-54 (56)
21 1em9_A GAG polyprotein capsid 20.8 1.1E+02 0.0036 22.3 3.7 33 5-43 14-61 (154)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=5e-47 Score=334.27 Aligned_cols=200 Identities=23% Similarity=0.327 Sum_probs=176.6
Q ss_pred CEEEeCHHHHHHHHHHhhhc--CCCccHHHHHHHHHHHHHHhhcc-CCCceeEEEEEeeCCCCCCCCCCCCcCcccceec
Q 039950 1 RLYHIDASSISRLQQLASVK--GKKRTKVEAFSAYIWKIMVTSID-EKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLS 77 (221)
Q Consensus 1 r~f~~~~~~i~~Lk~~~~~~--~~~~St~d~l~A~lW~~~~~ar~-~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~ 77 (221)
|+|+|++++|++||+.+.++ ..++|+||+|+||+|+|+++||. ++++.+.+.++||+|+|++|| +|++||||++.
T Consensus 232 ~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pp--lp~~Y~GN~v~ 309 (439)
T 4g22_A 232 SIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPS--LPPGYFGNVIF 309 (439)
T ss_dssp EEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSC--CCTTBCSCCEE
T ss_pred EEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCC--CCCCcccceee
Confidence 58999999999999999764 36899999999999999999998 678899999999999999999 99999999999
Q ss_pred ccccccchhhhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhccCCchhhhhhcCCCCCcEEEecCCCCCCCccccC
Q 039950 78 LAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFG 157 (221)
Q Consensus 78 ~~~~~~~~~~l~~~~L~~~A~~iR~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG 157 (221)
.+.+.++++||.+.+|+++|.+||+++.+++ ++++++.++|++..++...+..........++.+|||+++++|++|||
T Consensus 310 ~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFG 388 (439)
T 4g22_A 310 TATPIAIAGDLEFKPVWYAASKIHDALARMD-NDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFG 388 (439)
T ss_dssp EECCEEEHHHHHHSCHHHHHHHHHHHHHTCS-HHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCS
T ss_pred hhhcceEHHHHhhCcHHHHHHHHHHHHHhhC-HHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccC
Confidence 9999999999999999999999999999998 999999999998775543221111111356899999999999999999
Q ss_pred CCcccccccccccCCcceeEEEEecCCCCCCCEEEEEeccHHHHHHhhc
Q 039950 158 FGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALES 206 (221)
Q Consensus 158 ~G~P~~~~~~~~~~~~~~g~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~ 206 (221)
||+|+++++.... .+|.++++|+++++||++|.|+|++++|++|++
T Consensus 389 wGkP~~~~~~~~~---~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 389 WGRPIFMGPGGIA---YEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp SCCCSEEEESSCC---STTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCCcceeeccccC---CCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 9999999976543 478999999988889999999999999999986
No 2
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=3.8e-43 Score=310.21 Aligned_cols=206 Identities=17% Similarity=0.240 Sum_probs=174.8
Q ss_pred CEEEeCHHHHHHHHHHhhhc----CCCccHHHHHHHHHHHHHHhhc-c--CCCceeEEEEEeeCCCCCCCCCCCCcCccc
Q 039950 1 RLYHIDASSISRLQQLASVK----GKKRTKVEAFSAYIWKIMVTSI-D--EKHGKCKMGWLVDGRCRILKHENPMSSYIG 73 (221)
Q Consensus 1 r~f~~~~~~i~~Lk~~~~~~----~~~~St~d~l~A~lW~~~~~ar-~--~~~~~~~l~~~vd~R~rl~p~~~lp~~y~G 73 (221)
|+|+|++++|++||+.+.++ +.++|+||+|+||+|||+++|| . ++++.+.+.++||+|+|++ +|++|+|
T Consensus 232 ~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~----lP~~y~G 307 (451)
T 2rkv_A 232 AFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG----VSNNYPG 307 (451)
T ss_dssp EEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT----CCTTCCS
T ss_pred EEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC----CCCCCcc
Confidence 58999999999999999764 3579999999999999999998 3 5778999999999999997 7889999
Q ss_pred ceecccccccchhhhhcCCHHHHHHHHHHHHhhcChHHH-HHHHHHHHHhccCCchhhhhhcCCCCCcEEEecCCCCCCC
Q 039950 74 NVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAH-FLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVA 152 (221)
Q Consensus 74 N~~~~~~~~~~~~~l~~~~L~~~A~~iR~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y 152 (221)
|++..+.+.++++||.+.+|+++|.+||+++.+++ +++ +++.++|++..++...+........+.++.+|||+++++|
T Consensus 308 N~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y 386 (451)
T 2rkv_A 308 LLQNMTYHNSTIGEIANESLGATASRLRSELDPAS-MRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLW 386 (451)
T ss_dssp CCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGG
T ss_pred cceeeecccCcHHHhccchHHHHHHHHHHHhcccC-chhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCcc
Confidence 99999988889999999999999999999999998 777 9999999998765432211000123467999999999999
Q ss_pred ccccC--CCcccccccccccCCcceeEEEEecCCCCCCCEEEEEeccHHHHHHhhcCCCcCCCC
Q 039950 153 ELDFG--FGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALESDSIFQPMS 214 (221)
Q Consensus 153 ~~DFG--~G~P~~~~~~~~~~~~~~g~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~d~~~~~~~ 214 (221)
++||| ||+|++++..... ..+|.++++|.. ++||++|.++|++++|++|++|++|....
T Consensus 387 ~~DFG~gwG~P~~v~~~~~~--~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~~ 447 (451)
T 2rkv_A 387 DYDFGLGLGKPETVRRPIFE--PVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKYA 447 (451)
T ss_dssp GCCTTCSSCSCSEEECCBCS--CCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTTC
T ss_pred ccccCCCCCCceEEEcCCcc--CCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhhh
Confidence 99998 7999999754322 147888899864 57899999999999999999999997763
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1e-42 Score=307.75 Aligned_cols=189 Identities=20% Similarity=0.277 Sum_probs=164.9
Q ss_pred CEEEeCHHHHHHHHHHhhhcC---CCccHHHHHHHHHHHHHHhhcc------CCCceeEEEEEeeCCCCCCCCCCCCcCc
Q 039950 1 RLYHIDASSISRLQQLASVKG---KKRTKVEAFSAYIWKIMVTSID------EKHGKCKMGWLVDGRCRILKHENPMSSY 71 (221)
Q Consensus 1 r~f~~~~~~i~~Lk~~~~~~~---~~~St~d~l~A~lW~~~~~ar~------~~~~~~~l~~~vd~R~rl~p~~~lp~~y 71 (221)
|+|+|++++|++||+.+.++. .++|+||+|+||+|+|+++||. ++++.+.+.++||+|+|++|| +|++|
T Consensus 241 ~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pp--lP~~Y 318 (453)
T 2xr7_A 241 GTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPP--LPPSY 318 (453)
T ss_dssp EEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSC--CCTTB
T ss_pred EEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCC--CCccc
Confidence 589999999999999997632 5899999999999999999986 356789999999999999999 99999
Q ss_pred ccceecccccccchhhhhc-CCHHHHHHHHHHHHhh--cChHH-HHHHHHHHHHhccCCchhhhhhcCCCCCcEEEecCC
Q 039950 72 IGNVLSLAVGEASVTELKQ-GSISEIANRVHDSITK--VTNEA-HFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGR 147 (221)
Q Consensus 72 ~GN~~~~~~~~~~~~~l~~-~~L~~~A~~iR~~i~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~ 147 (221)
|||++..+.+.++++||.+ .+|+++|.+||+++.+ ++ ++ ++++ +|++..+.. .....+.+|||+
T Consensus 319 ~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~-~e~~~~~--~~~~~~~~~---------~~~~~~~vssw~ 386 (453)
T 2xr7_A 319 FGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKD-EEWILSG--SWFKEYDKV---------DAKRSLSVAGSP 386 (453)
T ss_dssp CSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSC-HHHHHSS--CTTSCCCCS---------CGGGEEEECSCS
T ss_pred ccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccC-Cccchhh--HHHHHHHhh---------ccCCcEEEeccc
Confidence 9999999998899999994 8999999999999999 56 77 8887 676643321 123479999999
Q ss_pred CCCCCccccCCCcccccccccccCCccee--EEEEecCCCCCCCEEEEEeccHHHHHHhhc
Q 039950 148 RFPVAELDFGFGNPVLGAVSSIIERSGVG--YINQRPSATCDGSWTVSAILWPELATALES 206 (221)
Q Consensus 148 ~~~~y~~DFG~G~P~~~~~~~~~~~~~~g--~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~ 206 (221)
++++|++|||||+|+++++...+ .+| .++++|+++++||++|.++|++++|++|++
T Consensus 387 ~~~~y~~DFG~G~P~~v~~~~~~---~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 387 KLDLYAADFGWGRPEKLEFVSID---NDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp SCCGGGCCCSSCSCSEEEEGGGS---SCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred cCCccccccCCCcceEEEeeeec---CCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 99999999999999999976543 367 788889888889999999999999999975
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=8e-43 Score=308.60 Aligned_cols=189 Identities=16% Similarity=0.192 Sum_probs=161.0
Q ss_pred CEEEeCHHHHHHHHHHhhhcC---CCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCCCCCCCcCcccceec
Q 039950 1 RLYHIDASSISRLQQLASVKG---KKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLS 77 (221)
Q Consensus 1 r~f~~~~~~i~~Lk~~~~~~~---~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~ 77 (221)
|+|+|++++|++||+.+.++. .++|+||+|+||+|+|+++|| +++.+.+.++||+|+|++|| +|++|+||++.
T Consensus 247 ~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar--~~~~~~l~~~vd~R~rl~pp--lP~~Y~GN~~~ 322 (454)
T 2e1v_A 247 ATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR--NDKLQLFGFPIDRRARMKPP--IPTAYFGNCVG 322 (454)
T ss_dssp EEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH--CCSEEEEEEEEECGGGSSSC--CCTTBCSCCEE
T ss_pred EEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEecchhccCCC--CCcccccceee
Confidence 589999999999999997632 579999999999999999999 67889999999999999999 99999999999
Q ss_pred ccccccchhhhhc-CCHHHHHHHHHHHHhhcChHHHH----HH-HHHHHHhccCCchhhhhhcCCCCCcEEEecCCCCCC
Q 039950 78 LAVGEASVTELKQ-GSISEIANRVHDSITKVTNEAHF----LD-LIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPV 151 (221)
Q Consensus 78 ~~~~~~~~~~l~~-~~L~~~A~~iR~~i~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~ 151 (221)
.+.+.++++||.+ .+|+++|.+||+++.+++ ++|+ ++ ..+|++... .. .....+.+|||+++++
T Consensus 323 ~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~vssw~~~~~ 392 (454)
T 2e1v_A 323 GCAAIAKTNLLIGKEGFITAAKLIGENLHKTL-TDYKDGVLKDDMESFNDLVS-------EG--MPTTMTWVSGTPKLRF 392 (454)
T ss_dssp EEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHH-HHHHTTCCCC-----CHHHH-------HC--CCSEEEEEECCTTSCG
T ss_pred eEEeecchhhccccccHHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHH-------hh--cCCceEEEecCCCCCc
Confidence 9998899999984 899999999999999986 5443 44 445544311 01 1244899999999999
Q ss_pred CccccCCCcccccccccccCCcceeEEEEecCCCCCCCEEEEEeccHHHHHHhhc
Q 039950 152 AELDFGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALES 206 (221)
Q Consensus 152 y~~DFG~G~P~~~~~~~~~~~~~~g~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~ 206 (221)
|++|||||+|+++++...+ .+|.++++|+++++||++|.++|++++|++|++
T Consensus 393 y~~DFG~G~P~~v~~~~~~---~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 393 YDMDFGWGKPKKLETVSID---HNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp GGCCSSSCSCSEEEEGGGG---GSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred ccccccCccceEEEeeeeC---CCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 9999999999999976543 468899999988889999999999999999975
No 5
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=6.9e-42 Score=300.02 Aligned_cols=193 Identities=18% Similarity=0.227 Sum_probs=163.9
Q ss_pred CEEEeCHHHHHHHHHHhhhcC--CCccHHHHHHHHHHHHHHhhcc---CCCceeEEEEEeeCCCCCCCCCCCCcCcccce
Q 039950 1 RLYHIDASSISRLQQLASVKG--KKRTKVEAFSAYIWKIMVTSID---EKHGKCKMGWLVDGRCRILKHENPMSSYIGNV 75 (221)
Q Consensus 1 r~f~~~~~~i~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~ar~---~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~ 75 (221)
|+|+|++++|++||+.+.++. .++|+||+|+||+|+|+++|+. ++++.+.+.++||+|+|++|| +|++|+||+
T Consensus 217 ~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pp--lP~~y~GN~ 294 (421)
T 2bgh_A 217 KRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPP--LPHYAMGNI 294 (421)
T ss_dssp EEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSC--CCTTBCSCC
T ss_pred EEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCC--CCCCccceE
Confidence 579999999999999997642 6899999999999999999986 356789999999999999999 999999999
Q ss_pred ecccccccchhhhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhccCCchhhhhhcCCCCCcEEEecCCCCCCCccc
Q 039950 76 LSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELD 155 (221)
Q Consensus 76 ~~~~~~~~~~~~l~~~~L~~~A~~iR~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~D 155 (221)
+..+.+.+++++ +.+|+++|.+||+++.+++ ++++++..++.+..... .....+.+|||+++++|++|
T Consensus 295 ~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~vssw~~~~~y~~D 362 (421)
T 2bgh_A 295 ATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTE-DDHNHELLKGMTCLYEL---------EPQELLSFTSWCRLGFYDLD 362 (421)
T ss_dssp EEEEEEEECTTC--CCCGGGGHHHHHHHTCCCS-SCHHHHHHHHHHHHHTS---------CGGGEEEEEEETTSCGGGCC
T ss_pred EEEEEEEecccc--cccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc---------CCCCeEEEeccccCCCcccc
Confidence 999888878775 7899999999999999998 88999887776532210 11246899999999999999
Q ss_pred cCCCcccccccccccCCcceeEEEEecCCCCCCCEEEEEeccHHHHHHhhcCCCcCCC
Q 039950 156 FGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALESDSIFQPM 213 (221)
Q Consensus 156 FG~G~P~~~~~~~~~~~~~~g~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~d~~~~~~ 213 (221)
||||+|+++++...+ .+|.++++|+++++ |++|.|+|++++|++|++ ||...
T Consensus 363 FGwGkP~~v~~~~~~---~~g~~~~~p~~~~~-gi~v~v~L~~~~m~~f~~--e~~~~ 414 (421)
T 2bgh_A 363 FGWGKPLSACTTTFP---KRNAALLMDTRSGD-GVEAWLPMAEDEMAMLPV--ELLSL 414 (421)
T ss_dssp SSSCCCSEEECCCCC---STTEEEEEECTTSS-SEEEEEEEEHHHHHHSCH--HHHTT
T ss_pred cCCCccCeecccccC---cCCEEEEEecCCCC-eEEEEEEcCHHHHHHHHH--HHHHh
Confidence 999999999976543 47889999998754 699999999999999998 55433
No 6
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=95.98 E-value=0.015 Score=51.75 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=58.6
Q ss_pred EEEeCHHHHHHHHHHhhhc-CCCccHHHHHHHHHHHHHHhhcc----CCCceeEEEEEeeCCCCCCCCCCCCcCccccee
Q 039950 2 LYHIDASSISRLQQLASVK-GKKRTKVEAFSAYIWKIMVTSID----EKHGKCKMGWLVDGRCRILKHENPMSSYIGNVL 76 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~-~~~~St~d~l~A~lW~~~~~ar~----~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~ 76 (221)
.+.|++++.++|++.|.+. ++.+|-+.+|.|.+-.++.+... .......+.++||+|+.+.++ .-.+|||.++
T Consensus 281 ~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~--~~~n~~~~~~ 358 (519)
T 3fot_A 281 IHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLRED--IASNFYAMCQ 358 (519)
T ss_dssp EEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHH--HHTSCCSCCE
T ss_pred EEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCc--ccccccceee
Confidence 4789999999999999884 56899999998877766665432 123357789999999999876 5567888877
Q ss_pred cccc
Q 039950 77 SLAV 80 (221)
Q Consensus 77 ~~~~ 80 (221)
....
T Consensus 359 ~~~~ 362 (519)
T 3fot_A 359 TAAV 362 (519)
T ss_dssp EEEE
T ss_pred eeee
Confidence 6443
No 7
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=95.67 E-value=0.1 Score=44.17 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=65.7
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCCCCC--CCcCcccceeccc
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHEN--PMSSYIGNVLSLA 79 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p~~~--lp~~y~GN~~~~~ 79 (221)
.+.++.+..++|++.|.+ ..+|.++++.|.+-..+.+-.........+.+++++|....|+.+ --++.+|.++-..
T Consensus 215 ~~~l~~~~~~~l~~~a~~--~~~t~~~~l~aa~~~~l~r~~~~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~l 292 (422)
T 1q9j_A 215 RLWLSKQQTSDLMAFGRE--HRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLA 292 (422)
T ss_dssp EECCCHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHTCSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEE
T ss_pred EEEeCHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHhcccCCCceEEEeeeeecccccCCCCChhhhhhhheeeeeee
Confidence 466889999999999875 468999999998766666553344566888999999998765411 1233455554222
Q ss_pred ccccchhhhhcCCHHHHHHHHHHHHhhc
Q 039950 80 VGEASVTELKQGSISEIANRVHDSITKV 107 (221)
Q Consensus 80 ~~~~~~~~l~~~~L~~~A~~iR~~i~~~ 107 (221)
++. .+.++.+++..+++.+.+.
T Consensus 293 ----p~~--~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 293 ----EIG--PNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp ----CCC--SSCCHHHHHHHHHHHHHHH
T ss_pred ----ecc--CCCCHHHHHHHHHHHHHHH
Confidence 221 1346777888877777643
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=91.34 E-value=1.3 Score=37.33 Aligned_cols=95 Identities=13% Similarity=0.029 Sum_probs=63.9
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCCCCCCCcCcccceeccccc
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVG 81 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~~~~~ 81 (221)
.+.++.+..++|++.|.+ ..+|.+.++.|.+-..+.+- .. ....+.+++++|.. + --++-+|+++-....
T Consensus 212 ~~~l~~~~~~~l~~~a~~--~~~t~~~~l~aa~~~~L~~~--~g-~dv~ig~~~~~R~~--~---~~~~~vG~f~n~lpl 281 (436)
T 1l5a_A 212 SYTLNSQLNHLLLKLANA--NQIGWPDALVALCALYLESA--EP-DAPWLWLPFMNRWG--S---VAANVPGLMVNSLPL 281 (436)
T ss_dssp EEECCHHHHHHHHHHHHH--TTCCHHHHHHHHHHHHHHHH--ST-TCCEEEEEECCCTT--S---GGGGSCSCCCEEEEE
T ss_pred EEecCHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHh--hC-CceEEeeecccCCC--h---HHhcCcceEEEEEEE
Confidence 467899999999999876 46899999999755444443 34 67889999999975 2 234556665443333
Q ss_pred ccchhhhhcCCHHHHHHHHHHHHhhcC
Q 039950 82 EASVTELKQGSISEIANRVHDSITKVT 108 (221)
Q Consensus 82 ~~~~~~l~~~~L~~~A~~iR~~i~~~~ 108 (221)
...... +.++.+++..+++.+.+.-
T Consensus 282 r~~~~~--~~t~~~~l~~v~~~~~~~~ 306 (436)
T 1l5a_A 282 LRLSAQ--QTSLGNYLKQSGQAIRSLY 306 (436)
T ss_dssp ECCCCT--TCBHHHHHHHHHHHHHHHH
T ss_pred EEecCC--CCCHHHHHHHHHHHHHHHh
Confidence 332221 4568888888887776543
No 9
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=89.54 E-value=1.7 Score=37.77 Aligned_cols=95 Identities=14% Similarity=0.117 Sum_probs=62.9
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCCCCCCCcCcccceeccccc
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVG 81 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~~~~~ 81 (221)
.+.++.+..++|++.|.+ ..+|.+.++.|.+-..+.+-. ......+.+++++|...+ -++-+|+++-....
T Consensus 307 ~~~l~~~~~~~l~~~a~~--~~~T~~~~l~aa~a~~L~~~~--~~~dv~~g~~~~gR~~~~-----~~~~vG~f~n~lpl 377 (520)
T 2jgp_A 307 TIGAGKALTEGLHQLAQA--TGTTLYMVLLAAYNVLLAKYA--GQEDIIVGTPITGRSHAD-----LEPIVGMFVNTLAM 377 (520)
T ss_dssp EEECCHHHHHHHHHHHHH--HTCCHHHHHHHHHHHHHHHHH--TCSCEEEEEEECCCCSGG-----GTTCCSCCCEEEEE
T ss_pred EEeCCHHHHHHHHHHHHH--cCCCHHHHHHHHHHHHHHHhc--CCCCeEEEeccCCCCchh-----hhccEEeeeeeeeE
Confidence 467888899999998875 458999999987555554443 345688999999997622 24556665543333
Q ss_pred ccchhhhhcCCHHHHHHHHHHHHhhc
Q 039950 82 EASVTELKQGSISEIANRVHDSITKV 107 (221)
Q Consensus 82 ~~~~~~l~~~~L~~~A~~iR~~i~~~ 107 (221)
..... .+.++.+++..+++.+.+.
T Consensus 378 r~~~~--~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 378 RNKPQ--REKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp EECCC--TTSBHHHHHHHHHHHHHHH
T ss_pred EecCC--CCCCHHHHHHHHHHHHHHH
Confidence 33222 1356778888877776543
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=88.42 E-value=4.9 Score=34.11 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=66.3
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCC-CCCCCcCcccceecccc
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILK-HENPMSSYIGNVLSLAV 80 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p-~~~lp~~y~GN~~~~~~ 80 (221)
.+.++.+..++|++.+.. ...+|.++++.|.+-..+.+-. ......+.+++++|....+ + --++-+|+++-..-
T Consensus 237 ~~~l~~~~~~~l~~~~~~-~~~~t~~~~llaa~~~~l~~~~--~~~dv~ig~~~~gR~~~~~~~--~~~~~vG~f~n~lp 311 (466)
T 2xhg_A 237 RIRLHPEETEQLLKHANQ-AYQTEINDLLLAALGLAFAEWS--KLAQIVIHLEGHGREDIIEQA--NVARTVGWFTSQYP 311 (466)
T ss_dssp EEECCHHHHHHHHHTGGG-TTTCCHHHHHHHHHHHHHHHHH--CCSEEEEEEEECCCCSCSTTC--CCTTCCSCCCEEEE
T ss_pred EEEcCHHHHHHHHHHhHH-hhCCCHHHHHHHHHHHHHHHHh--CCCceEEEecCCCCCccccCC--Cccccccceeeecc
Confidence 367889999999887743 1358999999997665555543 3456788999999987532 1 12345566543332
Q ss_pred cccchhhhhcCCHHHHHHHHHHHHhhcC
Q 039950 81 GEASVTELKQGSISEIANRVHDSITKVT 108 (221)
Q Consensus 81 ~~~~~~~l~~~~L~~~A~~iR~~i~~~~ 108 (221)
....+. .+.++.+++..|++.+..+.
T Consensus 312 lr~~~~--~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 312 VLLDLK--QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEECS--CCCSHHHHHHHHHHHHHHSG
T ss_pred EEEecC--CCCCHHHHHHHHHHHHHhCc
Confidence 332222 14578899999999988764
No 11
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=85.40 E-value=1.4 Score=37.99 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=59.3
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCcc--HHHHHHHHHHHHHHhhcc---------CCCceeEEEEEeeCCCCCCCCCCCCcC
Q 039950 2 LYHIDASSISRLQQLASVKGKKRT--KVEAFSAYIWKIMVTSID---------EKHGKCKMGWLVDGRCRILKHENPMSS 70 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~S--t~d~l~A~lW~~~~~ar~---------~~~~~~~l~~~vd~R~rl~p~~~lp~~ 70 (221)
.+.++.+..++|++.|.+ ..+| .+.++.|.+-..+.+-+. .......+.+++++|..- --++
T Consensus 219 ~~~l~~~~~~~l~~~a~~--~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~-----~~~~ 291 (493)
T 4hvm_A 219 RLRVPGSRWQALTEPGGP--LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL-----QLGS 291 (493)
T ss_dssp EEEEEHHHHHHHHCC--------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT-----TCCS
T ss_pred EEEcCHHHHHHHHHHHHH--cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc-----chhc
Confidence 467888999999988865 4578 999999986555555410 234567889999999662 2345
Q ss_pred cccceecccccccchhhhhcCCHHHHHHHHHHHHhhcC
Q 039950 71 YIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVT 108 (221)
Q Consensus 71 y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~~i~~~~ 108 (221)
.+|+++-..-.........+.++.+++..+++.+.+.-
T Consensus 292 ~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~ 329 (493)
T 4hvm_A 292 VVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAV 329 (493)
T ss_dssp BCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHH
T ss_pred CeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHH
Confidence 66776544333333332114567888888877766543
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=79.70 E-value=9.8 Score=37.32 Aligned_cols=98 Identities=14% Similarity=0.217 Sum_probs=64.3
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCCCCCCCcCcccceeccccc
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVG 81 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~~~~~ 81 (221)
.+.++++..++||+.|.+ ..+|.+.++.|.+-..+.|-. ......+.+++++|....+. + ++.+|+++-....
T Consensus 232 ~~~l~~~~~~~L~~~a~~--~~~T~~~vllaa~a~~L~r~t--g~~dvv~G~pvsgR~~~~~~--~-~~~vG~fvntlpl 304 (1304)
T 2vsq_A 232 LFSPSEAETKAFTELAKS--QHTTLSTALQAVWSVLISRYQ--QSGDLAFGTVVSGRPAEIKG--V-EHMVGLFINVVPR 304 (1304)
T ss_dssp EECCCHHHHHHHHHHHHH--TTCCHHHHHHHHHHHHHHHHH--TCSEEEEEEEECCCCTTSTT--G-GGCCSSCCEEEEE
T ss_pred EEecCHHHHHHHHHHHHH--cCCCHHHHHHHHHHHHHHHhc--CCCCEEEEEEeCCCCccchh--h-hcccccceeEEEE
Confidence 366889999999999876 458999999987544444433 34568899999999764332 2 3455555433322
Q ss_pred ccchhhhhcCCHHHHHHHHHHHHhhcC
Q 039950 82 EASVTELKQGSISEIANRVHDSITKVT 108 (221)
Q Consensus 82 ~~~~~~l~~~~L~~~A~~iR~~i~~~~ 108 (221)
...+. .+.++.++...+++...+.-
T Consensus 305 r~~~~--~~~s~~~ll~~v~~~~~~a~ 329 (1304)
T 2vsq_A 305 RVKLS--EGITFNGLLKRLQEQSLQSE 329 (1304)
T ss_dssp EEECC--TTCBHHHHHHHHHHHHHHHG
T ss_pred EecCC--CCCcHHHHHHHHHHHHHHhh
Confidence 32222 14578888888888776543
No 13
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=61.51 E-value=5.5 Score=19.16 Aligned_cols=18 Identities=17% Similarity=0.344 Sum_probs=15.1
Q ss_pred CccHHHHHHHHHHHHHHh
Q 039950 23 KRTKVEAFSAYIWKIMVT 40 (221)
Q Consensus 23 ~~St~d~l~A~lW~~~~~ 40 (221)
-+++.|-|+-|+|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 478899999999998753
No 14
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=54.90 E-value=20 Score=20.68 Aligned_cols=25 Identities=8% Similarity=0.130 Sum_probs=20.3
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccH
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTK 26 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St 26 (221)
.|+|+.++-+.|++.|.++...++.
T Consensus 5 s~Y~SkEey~~L~klA~eE~eSV~s 29 (55)
T 1x93_A 5 SLYFSDEQYQKLEKMANEEEESVGS 29 (55)
T ss_dssp EEEECHHHHHHHHHHHHHTTSCTTH
T ss_pred EEEecHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876554544
No 15
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=32.33 E-value=44 Score=20.00 Aligned_cols=36 Identities=11% Similarity=0.221 Sum_probs=25.2
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhcc
Q 039950 2 LYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSID 43 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~ 43 (221)
.|+|+.++-+.|.+.|.++...+ ..++=|.+.++..
T Consensus 19 s~Y~SkEey~~L~klA~eE~eSV------~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 19 TFYLSKEEHDVLRRLADEEVESV------NSFVKRHILKTII 54 (66)
T ss_dssp EEEEEHHHHHHHHHHHHTTCSCH------HHHHHHHHHHHHC
T ss_pred EEEecHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 48999999999999998754433 3345555555543
No 16
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=27.02 E-value=55 Score=16.85 Aligned_cols=14 Identities=14% Similarity=0.276 Sum_probs=11.8
Q ss_pred CHHHHHHHHHHhhh
Q 039950 6 DASSISRLQQLASV 19 (221)
Q Consensus 6 ~~~~i~~Lk~~~~~ 19 (221)
+++++++||.++..
T Consensus 13 tpeelkklkeeakk 26 (36)
T 2ki0_A 13 TPEELKKLKEEAKK 26 (36)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 57899999998865
No 17
>4ard_A Capsid protein P27; viral protein, retrovirus, GAG; 7.00A {Mason-pfizer monkey virus}
Probab=22.73 E-value=79 Score=21.85 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=23.2
Q ss_pred eCHHHHHHHHHHhhhcCC---C-------ccHHHHHHHHHHHHHHhhcc
Q 039950 5 IDASSISRLQQLASVKGK---K-------RTKVEAFSAYIWKIMVTSID 43 (221)
Q Consensus 5 ~~~~~i~~Lk~~~~~~~~---~-------~St~d~l~A~lW~~~~~ar~ 43 (221)
|.-+.|+.||+.|...|+ . ++. ++|+--=|+++.|+..
T Consensus 1 fd~k~iKdLKka~t~YG~ts~y~~~lL~~la~-~~LtP~DWkslar~~L 48 (116)
T 4ard_A 1 FDFAVIKELKTAASQYGATAPYTLAIVESVAD-NWLTPTDWNTLVRAVL 48 (116)
T ss_pred CCHHHHHHHHHHHHHhCCChHHHHHHHHHHHH-hccChHhHHHHHHHHc
Confidence 445789999999975321 1 111 2333334888888875
No 18
>1clv_I Protein (alpha-amylase inhibitor); insect alpha-amylase inhibitor, amaranthus hypochondriacus, yellow MEAL WORM, knottin, hydrolase; 2.00A {Tenebrio molitor} SCOP: g.3.2.1 PDB: 1htx_A 1qfd_A
Probab=22.69 E-value=24 Score=17.70 Aligned_cols=9 Identities=44% Similarity=0.611 Sum_probs=6.6
Q ss_pred CCcCcccce
Q 039950 67 PMSSYIGNV 75 (221)
Q Consensus 67 lp~~y~GN~ 75 (221)
-..+|+||+
T Consensus 23 ctsdyygnc 31 (32)
T 1clv_I 23 CTSDYYGNC 31 (32)
T ss_dssp BSCSSSEEB
T ss_pred ccccccccC
Confidence 346799997
No 19
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=22.32 E-value=78 Score=17.81 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=17.3
Q ss_pred EEEeCHHHHHHHHHHhhhcCC
Q 039950 2 LYHIDASSISRLQQLASVKGK 22 (221)
Q Consensus 2 ~f~~~~~~i~~Lk~~~~~~~~ 22 (221)
.|.++.++.+.|++.|...+-
T Consensus 19 ~vRlt~eE~~~l~~~A~~~g~ 39 (51)
T 2ba3_A 19 TLRFSPVEDETIRKKAEDSGL 39 (51)
T ss_dssp EEEECHHHHHHHHHHHHHHTC
T ss_pred EEEECHHHHHHHHHHHHHhCC
Confidence 478999999999999987553
No 20
>2p63_A Cell division control protein 4; ubiquitination, helix bundle, SCF complex, cell cycle; 2.67A {Saccharomyces cerevisiae}
Probab=20.98 E-value=32 Score=20.22 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=22.2
Q ss_pred CCcCcccceecccccccchhhhhcCCHHHHHHHHHHHHh
Q 039950 67 PMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSIT 105 (221)
Q Consensus 67 lp~~y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~~i~ 105 (221)
+|..+|-|.++.....+...| |+++.-.|+..++
T Consensus 21 lp~~~~knLiF~Lvs~m~Rse-----LSDl~TlikDNLK 54 (56)
T 2p63_A 21 LPHAYFKNLLFRLVANMDRSE-----LSDLGTLIKDNLK 54 (56)
T ss_dssp SCTTHHHHHHHHHHHHCCHHH-----HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHH-----HHHHHHHHHhhhc
Confidence 666777777776655554444 5677777776654
No 21
>1em9_A GAG polyprotein capsid protein P27; virus/viral protein; 2.05A {Rous sarcoma virus - prague C} SCOP: a.73.1.1
Probab=20.84 E-value=1.1e+02 Score=22.27 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=23.6
Q ss_pred eCHHHHHHHHHHhhhcC---------------CCccHHHHHHHHHHHHHHhhcc
Q 039950 5 IDASSISRLQQLASVKG---------------KKRTKVEAFSAYIWKIMVTSID 43 (221)
Q Consensus 5 ~~~~~i~~Lk~~~~~~~---------------~~~St~d~l~A~lW~~~~~ar~ 43 (221)
++..-|++||+.|...| .+++.+| |+.++||..
T Consensus 14 l~~K~ikeLk~A~~~yG~~aP~T~a~lEaL~~~~L~P~D------wk~laRa~L 61 (154)
T 1em9_A 14 LEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHD------VTNLMRVIL 61 (154)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHTSSCCCHHH------HHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHcCCCChHH------HHHHHHHHh
Confidence 57788999999998643 3455555 777777765
Done!