BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039957
(481 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 163/388 (42%), Gaps = 50/388 (12%)
Query: 1 MTGQIPTE-IGNLQNLKSLFLGANNLSGLIPPMIFNIS-TIRNLNLGGNRLSGH-LPSMI 57
+G++P + + ++ LK L L N SG +P + N+S ++ L+L N SG LP++
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 58 GHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117
+ ++ L L +N G IP +++N ++L+ L L FN SG IP++ G+L L L L
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 118 LMNNLTTESSSAYQW----------------SFLSSLTNCRYLVYLILSGNPLGGILPPS 161
+N L E + S L+NC L ++ LS N L G +P
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 506
Query: 162 IGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSI---------- 211
IG +L S G IP E+G R LI+L L N NGTIP ++
Sbjct: 507 IGRLE-NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 212 -------------GTLKQLQGFFLPETNL---QGYVPXXXXXXXXXXXXXXXXXKLSGHI 255
G K+ G NL QG GH
Sbjct: 566 FIAGKRYVYIKNDGMKKECHG----AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 621
Query: 256 PPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVLRV 315
P + S+ LD+ N L+ IP + S+ Y+ + V L+ L +
Sbjct: 622 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 681
Query: 316 LDLSRNQLSGDIPSTIGALVDLETISLA 343
LDLS N+L G IP + AL L I L+
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLS 709
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 52/300 (17%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS 60
+ G+IP E+ ++ L++L L N+L+G IP + N + + ++L NRL+G +P IG
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR- 509
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIP------------NTFGN 108
L N+ L+L +N+ G IP + + LI LDL N F+G IP N
Sbjct: 510 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 569
Query: 109 LRHLSVLSLLM--------NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPP 160
R++ + + M N L + + Q + LS+ C ++ GG P
Sbjct: 570 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN------ITSRVYGGHTSP 623
Query: 161 SIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGF 220
+ N + S+ S L G IPKEIG + L L+LG ND++G+IP +G L+ L
Sbjct: 624 TFDN-NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 682
Query: 221 FLPETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIP 280
L KL G IP +++LT L E+DL +N L+ IP
Sbjct: 683 DLSSN------------------------KLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 161/366 (43%), Gaps = 50/366 (13%)
Query: 9 IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLE 68
+G+ L+ L + N LSG I + ++ LN+ N+ G +P + L +++YL
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLS 272
Query: 69 LGDNNLIGTIPNSITNATKLII-LDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE-- 125
L +N G IP+ ++ A + LDL N F G +P FG+ L L+L NN + E
Sbjct: 273 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Query: 126 ---------------SSSAYQWSFLSSLTN-CRYLVYLILSGNPLGG-ILPPSIGNFSTS 168
S + + SLTN L+ L LS N G ILP N +
Sbjct: 333 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 392
Query: 169 LQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQ 228
LQ G IP + + L+ L L FN L+GTIP+S+G+L +L+ L L+
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 229 GYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGY 288
G +P L+G IP L++ T+L + L +N+LT IP W
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK--W---- 506
Query: 289 ILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGS 348
+ +L+ L +L LS N SG+IP+ +G L + L +
Sbjct: 507 ------------------IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN---TN 545
Query: 349 VYKGTI 354
++ GTI
Sbjct: 546 LFNGTI 551
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 132/287 (45%), Gaps = 11/287 (3%)
Query: 1 MTGQIPTEI-GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGH 59
TG+IP + G L L L N+ G +PP + S + +L L N SG LP
Sbjct: 278 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 337
Query: 60 SLPNIKYLELGDNNLIGTIPNSITN-ATKLIILDLGFNTFSGHI-PNTFGNLRHLSVLSL 117
+ +K L+L N G +P S+TN + L+ LDL N FSG I PN N ++
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASEC 177
L NN + +L+NC LV L LS N L G +P S+G+ S L+
Sbjct: 398 LQNN-------GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLN 449
Query: 178 KLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXXXX 237
L+G IP+E+ +++ L L L FNDL G IP+ + L L L G +P
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Query: 238 XXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLW 284
SG+IP L SL LDL +N +IP++++
Sbjct: 510 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 150/350 (42%), Gaps = 56/350 (16%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS 60
TG+IP + N L SL L N LSG IP + ++S +R+L L N L G +P + +
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY- 461
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+ ++ L L N+L G IP+ ++N T L + L N +G IP G L +L++L L
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL--- 518
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQ-RFSASE--C 177
S++++ + + L +CR L++L L+ N G +P ++ S + F A +
Sbjct: 519 -----SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 573
Query: 178 KLKGTIPKEIGHLRGLIYLSLG-----FNDLNGTIPTSIGTLKQLQGFFLPETN------ 226
+K K+ H G + G N L+ P +I T + G P +
Sbjct: 574 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI-TSRVYGGHTSPTFDNNGSMM 632
Query: 227 --------LQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSS 278
L GY+P +SG IP + L L LDL SNKL
Sbjct: 633 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 692
Query: 279 IPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIP 328
IP ++ +L + EI DLS N LSG IP
Sbjct: 693 IPQAMSALTMLTEI------------------------DLSNNNLSGPIP 718
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 18/333 (5%)
Query: 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL 74
LK L + N +SG + + + L++ N S +P + S +++L++ N L
Sbjct: 177 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPFLGDCSA--LQHLDISGNKL 232
Query: 75 IGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSF 134
G +I+ T+L +L++ N F G IP L+ L LSL N T E F
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPD-----F 285
Query: 135 LSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKE-IGHLRGL 193
LS C L L LSGN G +PP G+ S +S G +P + + +RGL
Sbjct: 286 LSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN-NFSGELPMDTLLKMRGL 342
Query: 194 IYLSLGFNDLNGTIPTSIGTL-KQLQGFFLPETNLQGYV-PXXXXXXXXXXXXXXXXXK- 250
L L FN+ +G +P S+ L L L N G + P
Sbjct: 343 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 402
Query: 251 LSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKL 310
+G IPP L++ + L L L N L+ +IPSSL SL + ++ + +
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Query: 311 KVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343
K L L L N L+G+IPS + +L ISL+
Sbjct: 463 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 495
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIG-H 59
++G IP E+G+L+ L L L +N L G IP + ++ + ++L N LSG +P M
Sbjct: 665 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 724
Query: 60 SLPNIKYL 67
+ P K+L
Sbjct: 725 TFPPAKFL 732
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 163/388 (42%), Gaps = 50/388 (12%)
Query: 1 MTGQIPTE-IGNLQNLKSLFLGANNLSGLIPPMIFNIS-TIRNLNLGGNRLSGH-LPSMI 57
+G++P + + ++ LK L L N SG +P + N+S ++ L+L N SG LP++
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 58 GHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSL 117
+ ++ L L +N G IP +++N ++L+ L L FN SG IP++ G+L L L L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 118 LMNNLTTESSSAYQW----------------SFLSSLTNCRYLVYLILSGNPLGGILPPS 161
+N L E + S L+NC L ++ LS N L G +P
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509
Query: 162 IGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSI---------- 211
IG +L S G IP E+G R LI+L L N NGTIP ++
Sbjct: 510 IGRLE-NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 212 -------------GTLKQLQGFFLPETNL---QGYVPXXXXXXXXXXXXXXXXXKLSGHI 255
G K+ G NL QG GH
Sbjct: 569 FIAGKRYVYIKNDGMKKECHG----AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 624
Query: 256 PPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVLRV 315
P + S+ LD+ N L+ IP + S+ Y+ + V L+ L +
Sbjct: 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684
Query: 316 LDLSRNQLSGDIPSTIGALVDLETISLA 343
LDLS N+L G IP + AL L I L+
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLS 712
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 52/300 (17%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS 60
+ G+IP E+ ++ L++L L N+L+G IP + N + + ++L NRL+G +P IG
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR- 512
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIP------------NTFGN 108
L N+ L+L +N+ G IP + + LI LDL N F+G IP N
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 572
Query: 109 LRHLSVLSLLM--------NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPP 160
R++ + + M N L + + Q + LS+ C ++ GG P
Sbjct: 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN------ITSRVYGGHTSP 626
Query: 161 SIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGF 220
+ N + S+ S L G IPKEIG + L L+LG ND++G+IP +G L+ L
Sbjct: 627 TFDN-NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685
Query: 221 FLPETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIP 280
L KL G IP +++LT L E+DL +N L+ IP
Sbjct: 686 DLSSN------------------------KLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 161/366 (43%), Gaps = 50/366 (13%)
Query: 9 IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLE 68
+G+ L+ L + N LSG I + ++ LN+ N+ G +P + L +++YL
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLS 275
Query: 69 LGDNNLIGTIPNSITNATKLII-LDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE-- 125
L +N G IP+ ++ A + LDL N F G +P FG+ L L+L NN + E
Sbjct: 276 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Query: 126 ---------------SSSAYQWSFLSSLTN-CRYLVYLILSGNPLGG-ILPPSIGNFSTS 168
S + + SLTN L+ L LS N G ILP N +
Sbjct: 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395
Query: 169 LQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQ 228
LQ G IP + + L+ L L FN L+GTIP+S+G+L +L+ L L+
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 229 GYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGY 288
G +P L+G IP L++ T+L + L +N+LT IP W
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK--W---- 509
Query: 289 ILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGS 348
+ +L+ L +L LS N SG+IP+ +G L + L +
Sbjct: 510 ------------------IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN---TN 548
Query: 349 VYKGTI 354
++ GTI
Sbjct: 549 LFNGTI 554
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 132/287 (45%), Gaps = 11/287 (3%)
Query: 1 MTGQIPTEI-GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGH 59
TG+IP + G L L L N+ G +PP + S + +L L N SG LP
Sbjct: 281 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 340
Query: 60 SLPNIKYLELGDNNLIGTIPNSITN-ATKLIILDLGFNTFSGHI-PNTFGNLRHLSVLSL 117
+ +K L+L N G +P S+TN + L+ LDL N FSG I PN N ++
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 118 LMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASEC 177
L NN + +L+NC LV L LS N L G +P S+G+ S L+
Sbjct: 401 LQNN-------GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLN 452
Query: 178 KLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXXXX 237
L+G IP+E+ +++ L L L FNDL G IP+ + L L L G +P
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 238 XXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLW 284
SG+IP L SL LDL +N +IP++++
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 150/350 (42%), Gaps = 56/350 (16%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS 60
TG+IP + N L SL L N LSG IP + ++S +R+L L N L G +P + +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY- 464
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+ ++ L L N+L G IP+ ++N T L + L N +G IP G L +L++L L
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL--- 521
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQ-RFSASE--C 177
S++++ + + L +CR L++L L+ N G +P ++ S + F A +
Sbjct: 522 -----SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576
Query: 178 KLKGTIPKEIGHLRGLIYLSLG-----FNDLNGTIPTSIGTLKQLQGFFLPETN------ 226
+K K+ H G + G N L+ P +I T + G P +
Sbjct: 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI-TSRVYGGHTSPTFDNNGSMM 635
Query: 227 --------LQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSS 278
L GY+P +SG IP + L L LDL SNKL
Sbjct: 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695
Query: 279 IPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIP 328
IP ++ +L + EI DLS N LSG IP
Sbjct: 696 IPQAMSALTMLTEI------------------------DLSNNNLSGPIP 721
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 18/333 (5%)
Query: 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL 74
LK L + N +SG + + + L++ N S +P + S +++L++ N L
Sbjct: 180 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPFLGDCSA--LQHLDISGNKL 235
Query: 75 IGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSF 134
G +I+ T+L +L++ N F G IP L+ L LSL N T E F
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPD-----F 288
Query: 135 LSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKE-IGHLRGL 193
LS C L L LSGN G +PP G+ S +S G +P + + +RGL
Sbjct: 289 LSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN-NFSGELPMDTLLKMRGL 345
Query: 194 IYLSLGFNDLNGTIPTSIGTL-KQLQGFFLPETNLQGYV-PXXXXXXXXXXXXXXXXXK- 250
L L FN+ +G +P S+ L L L N G + P
Sbjct: 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 405
Query: 251 LSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKL 310
+G IPP L++ + L L L N L+ +IPSSL SL + ++ + +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Query: 311 KVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343
K L L L N L+G+IPS + +L ISL+
Sbjct: 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIG-H 59
++G IP E+G+L+ L L L +N L G IP + ++ + ++L N LSG +P M
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 727
Query: 60 SLPNIKYL 67
+ P K+L
Sbjct: 728 TFPPAKFL 735
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFR-SFNSECEVLRNVRHQNLIKILSSCSTPD 402
G FG VYKG ++DGT VA+K +R + F +E E++ H+NL+++ C TP
Sbjct: 49 GGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 108
Query: 403 -----FKFMPNGS----LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ +M NGS L +R S LD +R I + L YLH H IIH
Sbjct: 109 ERLLVYPYMANGSVASCLRERPESQPP-LDWPKRQRIALGSARGLAYLH-DHCDPKIIHR 166
Query: 454 DLKPTSILLDENMVAHVSDFGISKLL 479
D+K +ILLDE A V DFG++KL+
Sbjct: 167 DVKAANILLDEEFEAVVGDFGLAKLM 192
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFR-SFNSECEVLRNVRHQNLIKILSSCSTPD 402
G FG VYKG ++DG VA+K +R + F +E E++ H+NL+++ C TP
Sbjct: 41 GGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 100
Query: 403 -----FKFMPNGS----LEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ +M NGS L +R S LD +R I + L YLH H IIH
Sbjct: 101 ERLLVYPYMANGSVASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHD-HCDPKIIHR 158
Query: 454 DLKPTSILLDENMVAHVSDFGISKLL 479
D+K +ILLDE A V DFG++KL+
Sbjct: 159 DVKAANILLDEEFEAVVGDFGLAKLM 184
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD- 402
G FG VYKG + DG VA+K + + F +E E L RH +L+ ++ C +
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 403 ----FKFMPNGSLEKRLYSHN---YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
+K+M NG+L++ LY + + +RL I I L YLH + IIH D+
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDV 165
Query: 456 KPTSILLDENMVAHVSDFGISK 477
K +ILLDEN V ++DFGISK
Sbjct: 166 KSINILLDENFVPKITDFGISK 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD- 402
G FG VYKG + DG VA+K + + F +E E L RH +L+ ++ C +
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 403 ----FKFMPNGSLEKRLYSHN---YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
+K+M NG+L++ LY + + +RL I I L YLH + IIH D+
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDV 165
Query: 456 KPTSILLDENMVAHVSDFGISK 477
K +ILLDEN V ++DFGISK
Sbjct: 166 KSINILLDENFVPKITDFGISK 187
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFR--SFNSECEVLRNVRHQNLIKILSSCST 400
AGSFG+V++ G+DVA+KI Q A R F E +++ +RH N++ + + +
Sbjct: 47 AGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 401 PD-----FKFMPNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
P +++ GSL + L+ LD RL++ DV + YLH+ + PI+H
Sbjct: 106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN--RNPPIVHR 163
Query: 454 DLKPTSILLDENMVAHVSDFGISKL 478
DLK ++L+D+ V DFG+S+L
Sbjct: 164 DLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFR--SFNSECEVLRNVRHQNLIKILSSCST 400
AGSFG+V++ G+DVA+KI Q A R F E +++ +RH N++ + + +
Sbjct: 47 AGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 401 PD-----FKFMPNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
P +++ GSL + L+ LD RL++ DV + YLH+ + PI+H
Sbjct: 106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN--RNPPIVHR 163
Query: 454 DLKPTSILLDENMVAHVSDFGISKL 478
+LK ++L+D+ V DFG+S+L
Sbjct: 164 NLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 16/145 (11%)
Query: 344 GSFGSVYKGTISDGTDVAIK----IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG VYKG +++ T VA+K + ++ E + F+ E +V+ +H+NL+++L S
Sbjct: 42 GGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS 100
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYF--LDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
D + +MPNGSL RL + L R I + + +LH H IH
Sbjct: 101 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH----IH 156
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
D+K +ILLDE A +SDFG+++
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLAR 181
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 16/145 (11%)
Query: 344 GSFGSVYKGTISDGTDVAIK----IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG VYKG +++ T VA+K + ++ E + F+ E +V+ +H+NL+++L S
Sbjct: 42 GGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS 100
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYF--LDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
D + +MPNGSL RL + L R I + + +LH H IH
Sbjct: 101 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH----IH 156
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
D+K +ILLDE A +SDFG+++
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLAR 181
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 16/145 (11%)
Query: 344 GSFGSVYKGTISDGTDVAIK----IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG VYKG +++ T VA+K + ++ E + F+ E +V+ +H+NL+++L S
Sbjct: 36 GGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS 94
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYF--LDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
D + +MPNGSL RL + L R I + + +LH H IH
Sbjct: 95 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH----IH 150
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
D+K +ILLDE A +SDFG+++
Sbjct: 151 RDIKSANILLDEAFTAKISDFGLAR 175
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 314 RVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ER 371
R+ L R S D G + + I +GSFG+VYKG DVA+K+ N+ +
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIG-SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ 74
Query: 372 AFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIM 431
++F +E VLR RH N++ + + P + LY H + ++ + +
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 134
Query: 432 IDVGST----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
ID+ ++YLH + IIH DLK +I L E++ + DFG++
Sbjct: 135 IDIARQTAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 314 RVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ER 371
R+ L R S D G + + I +GSFG+VYKG DVA+K+ N+ +
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIG-SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ 74
Query: 372 AFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIM 431
++F +E VLR RH N++ + + P + LY H + ++ + +
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 134
Query: 432 IDVGST----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
ID+ ++YLH + IIH DLK +I L E++ + DFG++
Sbjct: 135 IDIARQTAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 314 RVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ER 371
R+ L R S D G + + I +GSFG+VYKG DVA+K+ N+ +
Sbjct: 10 RMKTLGRRDSSDDWEIPDGQITVGQRIG-SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ 66
Query: 372 AFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIM 431
++F +E VLR RH N++ + + P + LY H + ++ + +
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 126
Query: 432 IDVGST----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
ID+ ++YLH + IIH DLK +I L E++ + DFG++
Sbjct: 127 IDIARQTAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 314 RVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQR--ER 371
R+ L R S D G + + I +GSFG+VYKG DVA+K+ N+ +
Sbjct: 17 RMKTLGRRDSSDDWEIPDGQITVGQRIG-SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ 73
Query: 372 AFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIM 431
++F +E VLR RH N++ + + P + LY H + ++ + +
Sbjct: 74 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 133
Query: 432 IDVGST----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
ID+ ++YLH + IIH DLK +I L E++ + DFG++
Sbjct: 134 IDIARQTAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 18 SGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + ++ + +ID+ ++YLH + IIH DLK
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLK 131
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E++ + DFG++
Sbjct: 132 SNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 18 SGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + ++ + +ID+ ++YLH + IIH DLK
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLK 131
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E++ + DFG++
Sbjct: 132 SNNIFLHEDLTVKIGDFGLA 151
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 23 SGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + ++ + +ID+ ++YLH + IIH DLK
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLK 136
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E++ + DFG++
Sbjct: 137 SNNIFLHEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 18 SGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + ++ + +ID+ ++YLH + IIH DLK
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLK 131
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E++ + DFG++
Sbjct: 132 SNNIFLHEDLTVKIGDFGLA 151
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 23 SGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + ++ + +ID+ ++YLH + IIH DLK
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLK 136
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E++ + DFG++
Sbjct: 137 SNNIFLHEDLTVKIGDFGLA 156
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 20 SGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + ++ + +ID+ ++YLH + IIH DLK
Sbjct: 78 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHRDLK 133
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E++ + DFG++
Sbjct: 134 SNNIFLHEDLTVKIGDFGLA 153
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 1 MTGQIPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS 60
+ G IP I L L L++ N+SG IP + I T+ L+ N LSG LP I S
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS-S 147
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLII-LDLGFNTFSGHIPNTFGNLRHLSVLSLLM 119
LPN+ + N + G IP+S + +KL + + N +G IP TF NL +L+ + L
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSR 206
Query: 120 NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKL 179
N L ++S + S N + + L+ N L L +G S +L ++
Sbjct: 207 NMLEGDASVLF-----GSDKNTQKIH---LAKNSLAFDL-GKVG-LSKNLNGLDLRNNRI 256
Query: 180 KGTIPKEIGHLRGLIYLSLGFNDLNGTIP 208
GT+P+ + L+ L L++ FN+L G IP
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 102/246 (41%), Gaps = 16/246 (6%)
Query: 39 IRNLNLGGNRLSGHLPSMIGHSLPNIKYLEL----GDNNLIGTIPNSITNATKLIILDLG 94
+ NL+L G L P I SL N+ YL G NNL+G IP +I T+L L +
Sbjct: 52 VNNLDLSGLNLPKPYP--IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYIT 109
Query: 95 FNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPL 154
SG IP+ ++ L L N L+ + +SSL N LV + GN +
Sbjct: 110 HTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS-----ISSLPN---LVGITFDGNRI 161
Query: 155 GGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTL 214
G +P S G+FS + S +L G IP +L L ++ L N L G G+
Sbjct: 162 SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSD 220
Query: 215 KQLQGFFLPETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNK 274
K Q L + +L + ++ G +P L L L L++ N
Sbjct: 221 KNTQKIHLAKNSL-AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 275 LTSSIP 280
L IP
Sbjct: 280 LCGEIP 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 104/247 (42%), Gaps = 15/247 (6%)
Query: 136 SSLTNCRYLVYLILSG-NPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLI 194
SSL N YL +L + G N L G +PP+I T L + + G IP + ++ L+
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKL-TQLHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 195 YLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXX-XXXXXXXXXXXXXXKLSG 253
L +N L+GT+P SI +L L G + G +P +L+G
Sbjct: 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188
Query: 254 HIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVL 313
IPP A+L +L +DL N L S L+ + V K L
Sbjct: 189 KIPPTFANL-NLAFVDLSRNMLEGDA-SVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 314 RVLDLSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAF 373
LDL N++ G +P + L L ++++ SF ++ G I G NLQR
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNV--SFNNLC-GEIPQGG-------NLQRFDVS 296
Query: 374 RSFNSEC 380
N++C
Sbjct: 297 AYANNKC 303
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 16/145 (11%)
Query: 344 GSFGSVYKGTISDGTDVAIK----IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG VYKG +++ T VA+K + ++ E + F+ E +V +H+NL+++L S
Sbjct: 33 GGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSS 91
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYF--LDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
D + + PNGSL RL + L R I + + +LH H IH
Sbjct: 92 DGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH----IH 147
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
D+K +ILLDE A +SDFG+++
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLAR 172
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 34 SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + + + +ID+ ++YLH + IIH DLK
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLK 147
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E+ + DFG++
Sbjct: 148 SNNIFLHEDNTVKIGDFGLA 167
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 34 SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + + + +ID+ ++YLH + IIH DLK
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLK 147
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E+ + DFG++
Sbjct: 148 SNNIFLHEDNTVKIGDFGLA 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+K+ N+ + ++F +E VLR RH N++ + +
Sbjct: 22 SGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 401 PDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----LEYLHHGHSSAPIIHCDLK 456
P + LY H + + + +ID+ ++YLH + IIH DLK
Sbjct: 80 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLK 135
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E+ + DFG++
Sbjct: 136 SNNIFLHEDNTVKIGDFGLA 155
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNL-------QRERAFRSFNS 378
+P+ ++ E G FG V+KG + D + VAIK L + F+ F
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 379 ECEVLRNVRHQNLIKILSSCSTPD---FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVG 435
E ++ N+ H N++K+ P +F+P G L RL + + +L +M+D+
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSIL---LDEN--MVAHVSDFGISK 477
+EY+ + + PI+H DL+ +I LDEN + A V+DFG+S+
Sbjct: 133 LGIEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNL--QRERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+GSFG+VYKG DVA+KI + F++F +E VLR RH N++ + +
Sbjct: 46 SGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 401 PDF----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+ ++ SL K L+ + + ++I ++YLH + IIH D+K
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMK 159
Query: 457 PTSILLDENMVAHVSDFGIS 476
+I L E + + DFG++
Sbjct: 160 SNNIFLHEGLTVKIGDFGLA 179
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNL-------QRERAFRSFNS 378
+P+ ++ E G FG V+KG + D + VAIK L + F+ F
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 379 ECEVLRNVRHQNLIKILSSCSTPD---FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVG 435
E ++ N+ H N++K+ P +F+P G L RL + + +L +M+D+
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSIL---LDEN--MVAHVSDFGISK 477
+EY+ + + PI+H DL+ +I LDEN + A V+DFG S+
Sbjct: 133 LGIEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 335 VDLETISLAGSFGSVYKGT--ISDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQ 389
+ +E I +G G V G + DV + I L+ ER R F SE ++ H
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 390 NLIKILSSCSTPDF-----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + ++M NGSL+ L +H+ I++ + ++ VG+ + YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
S +H DL ++L+D N+V VSDFG+S++L
Sbjct: 168 -SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 335 VDLETISLAGSFGSVYKGT--ISDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQ 389
+ +E I +G G V G + DV + I L+ ER R F SE ++ H
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 390 NLIKILSSCSTPDF-----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + ++M NGSL+ L +H+ I++ + ++ VG+ + YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
S +H DL ++L+D N+V VSDFG+S++L
Sbjct: 168 -SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 18/167 (10%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNL-------QRERAFRSFNS 378
+P+ ++ E G FG V+KG + D + VAIK L + F+ F
Sbjct: 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQR 72
Query: 379 ECEVLRNVRHQNLIKILSSCSTPD---FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVG 435
E ++ N+ H N++K+ P +F+P G L RL + + +L +M+D+
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSIL---LDEN--MVAHVSDFGISK 477
+EY+ + + PI+H DL+ +I LDEN + A V+DF +S+
Sbjct: 133 LGIEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFR---SFNSECEVLRNVRHQNLIKILSSC 398
G+FG V G G VA+KI N Q+ R+ E + L+ RH ++IK+
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 399 STP-DF----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
STP DF +++ G L + H ++ +E + + S ++Y H ++H
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH----RHMVVHR 135
Query: 454 DLKPTSILLDENMVAHVSDFGISKLLGE 481
DLKP ++LLD +M A ++DFG+S ++ +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFR---SFNSECEVLRNVRHQNLIKILSSC 398
G+FG V G G VA+KI N Q+ R+ E + L+ RH ++IK+
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 399 STP-DF----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
STP DF +++ G L + H ++ +E + + S ++Y H ++H
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH----RHMVVHR 135
Query: 454 DLKPTSILLDENMVAHVSDFGISKLLGE 481
DLKP ++LLD +M A ++DFG+S ++ +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 151
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 152 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 134
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 333 ALVDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVR 387
+ V +E + AG FG V +G + + VAIK ER R F SE ++
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 73
Query: 388 HQNLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
H N+I++ + + S P +FM NG+L+ L ++ +++ + ++ + S + YL
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL- 132
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ +H DL +IL++ N+V VSDFG+S+ L E
Sbjct: 133 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 161
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 162 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 333 ALVDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVR 387
+ V +E + AG FG V +G + + VAIK ER R F SE ++
Sbjct: 16 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 75
Query: 388 HQNLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
H N+I++ + + S P +FM NG+L+ L ++ +++ + ++ + S + YL
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL- 134
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ +H DL +IL++ N+V VSDFG+S+ L E
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG++++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 19 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 77
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 78 XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 133
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 134 NILVGENLVCKVADFGLARLI 154
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 22 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 80
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 81 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 136
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 137 NILVGENLVCKVADFGLARLI 157
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 344 GSFGSVYKGTISDGTDVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
G FG V+ GT + T VAIK N+ E +F E +V++ +RH+ L+++ + S
Sbjct: 196 GCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 401 PDF----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
++M GSL L +L + + +++ + S + Y+ + +H DL
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDL 307
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ +IL+ EN+V V+DFG+ +L+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLI 331
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 23 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 82
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +F+P GSL + L H +D ++ L + +EYL +
Sbjct: 83 CYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 138
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 18 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 76
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 77 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 132
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 133 NILVGENLVCKVADFGLARLI 153
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 20 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 78
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 79 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 134
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 135 NILVGENLVCKVADFGLARLI 155
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P ++M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+ ++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 343 AGSFGSVYKG---TISDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKILS 396
AG FG VYKG T S +V + I L+ E+ F E ++ H N+I++
Sbjct: 54 AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEG 113
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S ++M NG+L+K L + +L+ + ++ + + ++YL ++ +
Sbjct: 114 VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL----ANMNYV 169
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H DL +IL++ N+V VSDFG+S++L
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 278 GCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 336
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 392
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 393 NILVGENLVCKVADFGLARLI 413
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P + M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 253
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 254 YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 309
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 310 NILVGENLVCKVADFGLARLI 330
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 253
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 309
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 310 NILVGENLVCKVADFGLARLI 330
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 195 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 253
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 309
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 310 NILVGENLVCKVADFGLARLI 330
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 38 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 97
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 98 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 153
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P + M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 134
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 84
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 85 YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRDLRAA 140
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 141 NILVGENLVCKVADFGLARLI 161
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 335 VDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
+ ++ + AG FG V G + VAIK + E+ R F E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 390 NLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHG 444
N+I++ + + S P + M NGSL+ L H+ +++ + ++ + S ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL--- 163
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
S +H DL +IL++ N+V VSDFG+S++L +
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 347 GSVYKGTISDGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFK 404
G ++KG G D+ +K+ ++ R R FN EC LR H N++ +L +C +P
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 405 -------FMPNGSLEKRLYS-HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII-HCDL 455
+MP GSL L+ N+ +D + + +D+ + +L H+ P+I L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHAL 139
Query: 456 KPTSILLDENMVAHVS 471
S+++DE+M A +S
Sbjct: 140 NSRSVMIDEDMTARIS 155
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 38 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 97
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 98 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 153
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 26 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 84
Query: 404 ----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL+
Sbjct: 85 YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRDLRAA 140
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 141 NILVGENLVCKVADFGLARLI 161
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 321 NQLSGDIPSTIGA-LVDLETISLAGSFGSVYKG--TISDGTDVAIKIFNLQR---ERAFR 374
NQ + I A + +E + G FG V G + ++ + I L+ ++ R
Sbjct: 1 NQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 60
Query: 375 SFNSECEVLRNVRHQNLIK---ILSSCSTPDF--KFMPNGSLEKRLYSHNYFLDILERLN 429
F SE ++ H N+I +++ C ++M NGSL+ L ++ +++ +
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 120
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
++ +GS ++YL S +H DL +IL++ N+V VSDFG+S++L
Sbjct: 121 MLRGIGSGMKYL----SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 51 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 110
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 166
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 79
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 135
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L +L + + +++ + S + Y+ + +H DL
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLAAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 27 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 86
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 87 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 142
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 35 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAAR 149
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYV 170
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 35 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAAR 149
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYV 170
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 79
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 135
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 79
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 135
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 18 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 77
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 78 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 133
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 26 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 84
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 85 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAAR 140
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 141 NCLVNDQGVVKVSDFGLSRYV 161
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 321 NQLSGDIPSTIGA-LVDLETISLAGSFGSVYKG--TISDGTDVAIKIFNLQR---ERAFR 374
NQ + I A + +E + G FG V G + ++ + I L+ ++ R
Sbjct: 16 NQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 75
Query: 375 SFNSECEVLRNVRHQNLIK---ILSSCSTPDF--KFMPNGSLEKRLYSHNYFLDILERLN 429
F SE ++ H N+I +++ C ++M NGSL+ L ++ +++ +
Sbjct: 76 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 135
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
++ +GS ++YL S +H DL +IL++ N+V VSDFG+S++L
Sbjct: 136 MLRGIGSGMKYL----SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 26 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 85
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 86 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 141
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 23 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 82
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 83 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 138
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 25 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 84
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 85 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 140
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 19 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 78
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 79 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 134
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 24 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 83
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 84 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 139
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD- 402
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 403 ---FKFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M G L L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFR---SFNSECEVLRNVRHQNLIKILSSC 398
G+FG V G G VA+KI N Q+ R+ E + L+ RH ++IK+
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
STP FM G L + N LD E + + S ++Y H ++H
Sbjct: 86 STPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM----VVHR 140
Query: 454 DLKPTSILLDENMVAHVSDFGISKLLGE 481
DLKP ++LLD +M A ++DFG+S ++ +
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSD 168
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 78
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDLAAR 134
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYV 155
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 23 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 82
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L +H +D ++ L + +EYL +
Sbjct: 83 CYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL----GTKRY 138
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL +IL++ + DFG++K+L
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 332 GALVDLETISLAGSFGSVYKGTIS--DGTDVAIKIFNLQ---RERAFRSFNSECEVLRNV 386
+ + +E + AG FG V G + DVA+ I L+ E+ R F E ++
Sbjct: 42 ASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 387 RHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
H N++ + + +FM NG+L+ L H+ +++ + ++ + + + YL
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 442 HHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ +H DL +IL++ N+V VSDFG+S+++
Sbjct: 162 ----ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 195
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + +F E +V++ +RH+ L+++ + S
Sbjct: 29 GCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI 87
Query: 404 ----KFMPNGSLEKRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M G L L +L + + +++ + S + Y+ + +H DL+
Sbjct: 88 YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAA 143
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ EN+V V+DFG+++L+
Sbjct: 144 NILVGENLVCKVADFGLARLI 164
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 20 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 78
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 79 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDLAAR 134
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 135 NCLVNDQGVVKVSDFGLSRYV 155
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 332 GALVDLETISLAGSFGSVYKG--TISDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNV 386
+ + +E + G FG V G + ++ + I L+ ++ R F SE ++
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 387 RHQNLIK---ILSSCSTPDF--KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
H N+I +++ C ++M NGSL+ L ++ +++ + ++ +GS ++YL
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 442 HHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
S +H DL +IL++ N+V VSDFG+S++L
Sbjct: 127 ----SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 333 ALVDLETISLAGSFGSVYKG--TISDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVR 387
+ V +E + AG FG V G + ++ + I L+ E+ R F SE ++
Sbjct: 33 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 92
Query: 388 HQNLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
H N+I + + + STP +FM NGSL+ L ++ +++ + ++ + + ++YL
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL- 151
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ +H DL +IL++ N+V VSDFG+S+ L +
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 19 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 77
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 78 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDLAAR 133
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 134 NCLVNDQGVVKVSDFGLSRYV 154
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST--P 401
G FG V G DVAIK+ + + F E +V+ N+ H+ L+++ C+ P
Sbjct: 15 GQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 73
Query: 402 DF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
F ++M NG L L + + L + DV +EYL S +H DL
Sbjct: 74 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDLAAR 129
Query: 459 SILLDENMVAHVSDFGISKLL 479
+ L+++ V VSDFG+S+ +
Sbjct: 130 NCLVNDQGVVKVSDFGLSRYV 150
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 402 DF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F ++MP G+L L N + + L + + S +EYL + IH DL
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN----FIHRDLA 157
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V V+DFG+S+L+
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLM 180
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKILSSC-- 398
+G FG V+ G + VAIK RE A F E EV+ + H L+++ C
Sbjct: 17 SGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 399 STP---DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
P F+FM +G L L + L + +DV + YL A +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ASVIHRDL 129
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V VSDFG+++ +
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFV 153
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FG V+ D VA+K + A + F+ E E+L N++H++++K
Sbjct: 24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGV 83
Query: 398 CSTPD-----FKFMPNGSLEKRLYSHNYFLDIL------------ERLNIMIDVGSTLEY 440
C D F++M +G L K L +H ++ + L+I + + + Y
Sbjct: 84 CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVY 143
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
L +S +H DL + L+ EN++ + DFG+S+
Sbjct: 144 L----ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKILSSC-- 398
+G FG V+ G + VAIK RE A F E EV+ + H L+++ C
Sbjct: 20 SGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 399 STP---DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
P F+FM +G L L + L + +DV + YL A +IH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 132
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V VSDFG+++ +
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFV 156
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FGSV + D T + + LQ E R F E E+L++++H N++K
Sbjct: 21 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV 80
Query: 398 CSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
C + +++P GSL L H +D ++ L + +EYL +
Sbjct: 81 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTKRY 136
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH +L +IL++ + DFG++K+L
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKILSSC-- 398
+G FG V+ G + VAIK RE A F E EV+ + H L+++ C
Sbjct: 17 SGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 399 STP---DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
P F+FM +G L L + L + +DV + YL A +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 129
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V VSDFG+++ +
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFV 153
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKILSSC-- 398
+G FG V+ G + VAIK RE A F E EV+ + H L+++ C
Sbjct: 15 SGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 399 STP---DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
P F+FM +G L L + L + +DV + YL A +IH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 127
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V VSDFG+++ +
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFV 151
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G FG VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 136
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLM 159
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 84 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 139
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLM 162
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTI--SDGT--DVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSS 397
G FGSV +G + DGT VA+K L +R F SE +++ H N+I++L
Sbjct: 45 GEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV 104
Query: 398 C------STPD----FKFMPNGSLE-----KRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
C P FM G L RL + + + L M+D+ +EYL
Sbjct: 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL- 163
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
S+ +H DL + +L ++M V+DFG+SK
Sbjct: 164 ---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 143
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM 166
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 140
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLM 163
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 143
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM 166
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 84 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 139
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLM 162
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 143
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM 166
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 86
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 87 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 142
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLM 165
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 140
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLM 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 138
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM 161
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 88 PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 143
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM 166
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 138
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM 161
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 95
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 96 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 151
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 152 ARNCLVGENHLVKVADFGLSRLM 174
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 325 GDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLR 384
G + STI + L+ G FG V++G G +VA+KIF+ + ER S+ E E+ +
Sbjct: 1 GAMGSTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQ 56
Query: 385 NV--RHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID--------V 434
V RH+N++ +++ D L + H D L R + ++
Sbjct: 57 TVMLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 115
Query: 435 GSTLEYLHH---GHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
S L +LH G P I H DLK +IL+ +N ++D G++
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 343 AGSFGSVYKGT-ISDGTDV----AIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG + +G V AIKI N +A F E ++ ++ H +L+++L
Sbjct: 48 SGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLG 107
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C +P + MP+G L + ++ H + LN + + + YL ++H
Sbjct: 108 VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR----LVH 163
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLL 479
DL ++L+ ++DFG+++LL
Sbjct: 164 RDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH DL
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRDLA 140
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLM 163
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G FG VY G +VAI++ +++R E ++F E R RH+N++ + +C +P
Sbjct: 44 GRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101
Query: 402 DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLE----------YLHHGHSSAPII 451
P+ ++ L ++ I++DV T + YLH + I+
Sbjct: 102 -----PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGIL 152
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLLG 480
H DLK ++ D V ++DFG+ + G
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISG 180
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 138
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM 161
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 333 ALVDLETISLAGSFGSVYKG--TISDGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVR 387
+ V +E + AG FG V G + ++ + I L+ E+ R F SE ++
Sbjct: 7 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 66
Query: 388 HQNLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
H N+I + + + STP +FM NGSL+ L ++ +++ + ++ + + ++YL
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL- 125
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ +H L +IL++ N+V VSDFG+S+ L +
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED 161
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 81 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 136
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLM 159
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 138
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM 161
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 138
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM 161
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSC--ST 400
+G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 37 SGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQA 95
Query: 401 P---DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
P F+FM +G L L + L + +DV + YL A +IH DL
Sbjct: 96 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDLAA 151
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+ L+ EN V VSDFG+++ +
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFV 173
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 136
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLM 159
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 143
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM 166
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH DL
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRDLA 138
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM 161
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILS 396
L+TI G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 17 LQTIG-KGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 397 SCSTPD------FKFMPNGSLEKRLYSHNYFL---DILERLNIMIDVGSTLEYLHHGHSS 447
++M GSL L S + D L L +DV +EYL +
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN-- 128
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H DL ++L+ E+ VA VSDFG++K
Sbjct: 129 --FVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 321 NQLSGDIPSTIGA-LVDLETISLAGSFGSVYKGTIS----DGTDVAIKIFNL-QRERAFR 374
NQ + I A + +E + AG FG V G + VAIK + E+ R
Sbjct: 9 NQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRR 68
Query: 375 SFNSECEVLRNVRHQNLIKI--LSSCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLN 429
F E ++ H N+I + + + S P ++M NGSL+ L ++ +++ +
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVG 128
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
++ + + ++YL S +H DL +IL++ N+V VSDFG+S++L
Sbjct: 129 MLRGISAGMKYL----SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILS 396
L+TI G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 26 LQTIG-KGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 397 SCSTPD------FKFMPNGSLEKRLYSHNYFL---DILERLNIMIDVGSTLEYLHHGHSS 447
++M GSL L S + D L L +DV +EYL +
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN-- 137
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H DL ++L+ E+ VA VSDFG++K
Sbjct: 138 --FVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILS 396
L+TI G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 11 LQTIG-KGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 397 SCSTPD------FKFMPNGSLEKRLYSHNYFL---DILERLNIMIDVGSTLEYLHHGHSS 447
++M GSL L S + D L L +DV +EYL +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN-- 122
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H DL ++L+ E+ VA VSDFG++K
Sbjct: 123 --FVHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 343 AGSFGSVYKGT-ISDGTDV----AIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG + +G V AIKI N +A F E ++ ++ H +L+++L
Sbjct: 25 SGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLG 84
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C +P + MP+G L + ++ H + LN + + + YL ++H
Sbjct: 85 VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLL 479
DL ++L+ ++DFG+++LL
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV 386
+ TI + L+ G FG V++G G +VA+KIF+ + ER S+ E E+ + V
Sbjct: 23 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTV 78
Query: 387 --RHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID--------VGS 436
RH+N++ +++ D L + H D L R + ++ S
Sbjct: 79 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTAS 137
Query: 437 TLEYLHH---GHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
L +LH G P I H DLK +IL+ +N ++D G++
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 286
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH +L
Sbjct: 287 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRNLA 342
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 343 ARNCLVGENHLVKVADFGLSRLM 365
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILS 396
L+TI G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 198 LQTIG-KGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 397 SCSTPD------FKFMPNGSLEKRLYSHNYFL---DILERLNIMIDVGSTLEYLHHGHSS 447
++M GSL L S + D L L +DV +EYL +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN-- 309
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H DL ++L+ E+ VA VSDFG++K
Sbjct: 310 --FVHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV 386
+ TI + L+ G FG V++G G +VA+KIF+ + ER S+ E E+ + V
Sbjct: 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTV 91
Query: 387 --RHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID--------VGS 436
RH+N++ +++ D L + H D L R + ++ S
Sbjct: 92 MLRHENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTAS 150
Query: 437 TLEYLHH---GHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
L +LH G P I H DLK +IL+ +N ++D G++
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKILSSC-- 398
+G FG V+ G + VAIK RE A F E EV+ + H L+++ C
Sbjct: 18 SGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 399 STPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
P +FM +G L L + L + +DV + YL A +IH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 130
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V VSDFG+++ +
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFV 154
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 328
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N ++ + L + + S +EYL + IH +L
Sbjct: 329 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHRNLA 384
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 385 ARNCLVGENHLVKVADFGLSRLM 407
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FG V+ D VA+K A + F E E+L N++H++++K
Sbjct: 26 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGV 85
Query: 398 CSTPD-----FKFMPNGSLEKRLYSHNYFLDIL---------------ERLNIMIDVGST 437
C D F++M +G L K L +H IL + L+I + S
Sbjct: 86 CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASG 145
Query: 438 LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+ YL +S +H DL + L+ N++ + DFG+S+
Sbjct: 146 MVYL----ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST-- 400
+G FG V G DVA+K+ + + F E + + + H L+K CS
Sbjct: 18 SGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY 76
Query: 401 PDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
P + +++ NG L L SH L+ + L + DV + +L S IH DL
Sbjct: 77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL----ESHQFIHRDLAA 132
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+ L+D ++ VSDFG+++ +
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYV 154
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS-TP 401
G +G VY+G + VA+K + F E V++ ++H NL+++L C+ P
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289
Query: 402 DF----KFMPNGSLEKRLYSHN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
F +FM G+L L N + + L + + S +EYL + IH +L
Sbjct: 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHRNLA 345
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
+ L+ EN + V+DFG+S+L+
Sbjct: 346 ARNCLVGENHLVKVADFGLSRLM 368
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 330 TIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV--R 387
TI + L+ G FG V++G G +VA+KIF+ + ER S+ E E+ + V R
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLR 58
Query: 388 HQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID--------VGSTLE 439
H+N++ +++ D L + H D L R + ++ S L
Sbjct: 59 HENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA 117
Query: 440 YLHH---GHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
+LH G P I H DLK +IL+ +N ++D G++
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 330 TIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV--R 387
TI + L+ G FG V++G G +VA+KIF+ + ER S+ E E+ + V R
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLR 56
Query: 388 HQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID--------VGSTLE 439
H+N++ +++ D L + H D L R + ++ S L
Sbjct: 57 HENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA 115
Query: 440 YLHH---GHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
+LH G P I H DLK +IL+ +N ++D G++
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV--RHQNLIKILSSCSTP 401
G FG V++G G +VA+KIF+ + ER S+ E E+ + V RH+N++ +++
Sbjct: 14 GRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAA-DNK 68
Query: 402 DFKFMPNGSLEKRLYSHNYFLDILERLNIMID--------VGSTLEYLHH---GHSSAPI 450
D L + H D L R + ++ S L +LH G P
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 451 I-HCDLKPTSILLDENMVAHVSDFGIS 476
I H DLK +IL+ +N ++D G++
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
GSFG V Y T G VA+KI N L + E LR +RH ++IK+
Sbjct: 24 GSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDIL---ERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ D M L+ + D + E + S +EY H I+H D
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR----HKIVHRD 137
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
LKP ++LLDE++ ++DFG+S ++ +
Sbjct: 138 LKPENLLLDEHLNVKIADFGLSNIMTD 164
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
GSFG V Y T G VA+KI N L + E LR +RH ++IK+
Sbjct: 19 GSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDIL---ERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ D M L+ + D + E + S +EY H I+H D
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR----HKIVHRD 132
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
LKP ++LLDE++ ++DFG+S ++ +
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIMTD 159
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 347 GSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFK 404
G ++KG G D+ +K+ ++ R R FN EC LR H N++ +L +C +P
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 405 -------FMPNGSLEKRLYS-HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII--HCD 454
+ P GSL L+ N+ +D + + +D +L H+ P+I H
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL---HTLEPLIPRHA- 138
Query: 455 LKPTSILLDENMVAHVS 471
L S+ +DE+ A +S
Sbjct: 139 LNSRSVXIDEDXTARIS 155
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
GSFG V Y T G VA+KI N L + E LR +RH ++IK+
Sbjct: 25 GSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDIL---ERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ D M L+ + D + E + S +EY H I+H D
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR----HKIVHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
LKP ++LLDE++ ++DFG+S ++ +
Sbjct: 139 LKPENLLLDEHLNVKIADFGLSNIMTD 165
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K L C
Sbjct: 48 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LYFCF 106
Query: 400 TPDFK------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
D K + NG L K + F + R ++ S LEYLH IIH
Sbjct: 107 QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHR 161
Query: 454 DLKPTSILLDENMVAHVSDFGISKLL 479
DLKP +ILL+E+M ++DFG +K+L
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVL 187
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
GSFG V Y T G VA+KI N L + E LR +RH ++IK+
Sbjct: 15 GSFGKVKLAYHTTT--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDIL---ERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ D M L+ + D + E + S +EY H I+H D
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK----IVHRD 128
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
LKP ++LLDE++ ++DFG+S ++ +
Sbjct: 129 LKPENLLLDEHLNVKIADFGLSNIMTD 155
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 76
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 77 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 137 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 167
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 68
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 129 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ G ++ T VA+K + ++F E +++ ++H L+++ + + +
Sbjct: 22 AGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE 80
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERL-NIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+FM GSL L S +L +L + + + Y+ + IH DL+
Sbjct: 81 PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRDLR 136
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
++L+ E+++ ++DFG+++++
Sbjct: 137 AANVLVSESLMCKIADFGLARVI 159
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 74
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 75 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 135 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 165
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 20 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 78
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 79 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 139 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 169
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 12 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 70
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 71 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 131 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 161
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 74
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 75 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ IH DL+ +IL+ + + ++DFG+++L+ +
Sbjct: 135 N----YIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 77
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 78 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 138 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 168
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 344 GSFGSVYKGTISDGTD-VAIKIFNL-QRERAFRSFNS----ECEVLRNVRHQNLIKILSS 397
G F +VYK + VAIK L R A N E ++L+ + H N+I +L +
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80
Query: 398 CSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
F FM LE + ++ L M+ LEYLH I+H
Sbjct: 81 FGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW----ILH 135
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++LLDEN V ++DFG++K G
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLAKSFG 163
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ G + T VA+K Q + +F +E +++ ++HQ L+++ + +
Sbjct: 24 AGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP 82
Query: 403 F----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
++M NGSL L + + L I + L++ + + ++ + IH DL+
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRDLRA 138
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+IL+ + + ++DFG+++L+
Sbjct: 139 ANILVSDTLSCKIADFGLARLI 160
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ G + T VA+K Q + +F +E +++ ++HQ L+++ + +
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP 81
Query: 403 F----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
++M NGSL L + + L I + L++ + + ++ + IH DL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRDLRA 137
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+IL+ + + ++DFG+++L+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI 159
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ G + T VA+K Q + +F +E +++ ++HQ L+++ + +
Sbjct: 23 AGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP 81
Query: 403 F----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
++M NGSL L + + L I + L++ + + ++ + IH DL+
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRDLRA 137
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+IL+ + + ++DFG+++L+
Sbjct: 138 ANILVSDTLSCKIADFGLARLI 159
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 15 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 73
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 74 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 134 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 164
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 344 GSFGSV----YKGTISDGTD--VAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILS 396
G FG V Y T +DGT VA+K RS + E ++LR + H+++IK
Sbjct: 42 GHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG 100
Query: 397 SCSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
C +++P GSL L H+ + + + L + + YLH H
Sbjct: 101 CCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH---- 154
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
IH DL ++LLD + + + DFG++K + E
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ G + T VA+K Q + +F +E +++ ++HQ L+++ + +
Sbjct: 18 AGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP 76
Query: 403 F----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
++M NGSL L + + L I + L++ + + ++ + IH DL+
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRDLRA 132
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+IL+ + + ++DFG+++L+
Sbjct: 133 ANILVSDTLSCKIADFGLARLI 154
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FG V+ D VA+K E A + F E E+L ++HQ++++
Sbjct: 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 111
Query: 398 CSTPD-----FKFMPNGSLEKRLYSHNYFLDIL--------------ERLNIMIDVGSTL 438
C+ F++M +G L + L SH +L + L + V + +
Sbjct: 112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 171
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
YL H +H DL + L+ + +V + DFG+S+
Sbjct: 172 VYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 335 VDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI 394
+++E + G+FG V K DVAIK + ER ++F E L V H N++K+
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 67
Query: 395 LSSCSTP---DFKFMPNGSLEKRLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+C P ++ GSL L+ + ++ + + YLH A
Sbjct: 68 YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA- 126
Query: 450 IIHCDLKPTSILLDE-NMVAHVSDFGIS 476
+IH DLKP ++LL V + DFG +
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 335 VDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI 394
+++E + G+FG V K DVAIK + ER ++F E L V H N++K+
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 66
Query: 395 LSSCSTP---DFKFMPNGSLEKRLYSHN--YFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+C P ++ GSL L+ + ++ + + YLH A
Sbjct: 67 YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA- 125
Query: 450 IIHCDLKPTSILLDE-NMVAHVSDFGIS 476
+IH DLKP ++LL V + DFG +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FG V+ D VA+K E A + F E E+L ++HQ++++
Sbjct: 23 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 82
Query: 398 CSTPD-----FKFMPNGSLEKRLYSHNYFLDIL--------------ERLNIMIDVGSTL 438
C+ F++M +G L + L SH +L + L + V + +
Sbjct: 83 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 142
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
YL H +H DL + L+ + +V + DFG+S+
Sbjct: 143 VYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKGTIS-DG--TDVAIK-IFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSC 398
G+FG V K I DG D AIK + + R F E EVL + H N+I +L +C
Sbjct: 26 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 85
Query: 399 STPDF-----KFMPNGSL-----EKRLYSHNYFLDIL----------ERLNIMIDVGSTL 438
+ ++ P+G+L + R+ + I + L+ DV +
Sbjct: 86 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 145
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+YL S IH DL +IL+ EN VA ++DFG+S+
Sbjct: 146 DYL----SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF 403
G FG V+ GT + T VAIK + SF E ++++ ++H L+++ + S
Sbjct: 20 GQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPI 78
Query: 404 ----KFMPNGSLEKRLYS-HNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPT 458
++M GSL L L + +++ V + + Y+ + IH DL+
Sbjct: 79 YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN----YIHRDLRSA 134
Query: 459 SILLDENMVAHVSDFGISKLL 479
+IL+ ++ ++DFG+++L+
Sbjct: 135 NILVGNGLICKIADFGLARLI 155
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKGTIS-DG--TDVAIK-IFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSC 398
G+FG V K I DG D AIK + + R F E EVL + H N+I +L +C
Sbjct: 36 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 95
Query: 399 STPDF-----KFMPNGSL-----EKRLYSHNYFLDIL----------ERLNIMIDVGSTL 438
+ ++ P+G+L + R+ + I + L+ DV +
Sbjct: 96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+YL S IH DL +IL+ EN VA ++DFG+S+
Sbjct: 156 DYL----SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 46 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 105
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 106 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 160
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 161 LKPENILLNEDMHIQITDFGTAKVL 185
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL 182
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMPNGSLEKRLYSHNYFLDILER 427
E E+LRN+ H+N++K C+ +F+P+GSL++ L + +++ ++
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
L + + ++YL S +H DL ++L++ + DFG++K +
Sbjct: 129 LKYAVQICKGMDYL----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSS 397
G+FG V+ D VA+K E A + F E E+L ++HQ++++
Sbjct: 29 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 88
Query: 398 CSTPD-----FKFMPNGSLEKRLYSHNYFLDIL--------------ERLNIMIDVGSTL 438
C+ F++M +G L + L SH +L + L + V + +
Sbjct: 89 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 148
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
YL H +H DL + L+ + +V + DFG+S+
Sbjct: 149 VYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 158
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + ++ RE +A + E V+ +V + ++ ++L
Sbjct: 59 SGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLG 118
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 119 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 174
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLG 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-------FKFMPNGSLEKRLYSHNYFLDILER 427
E E+LRN+ H+N++K C+ +F+P+GSL++ L + +++ ++
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 116
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
L + + ++YL S +H DL ++L++ + DFG++K +
Sbjct: 117 LKYAVQICKGMDYL----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 16/163 (9%)
Query: 325 GDIPSTIGALVDLETISL--AGSFGSVYKGTISDGTDV-AIKIF---NLQRERAFRSFNS 378
++P + D + + G FG+VY + A+K+ L++E
Sbjct: 4 AEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 379 ECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMID 433
E E+ ++RH N++++ + +F P G L K L H F D M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 122
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ L Y H +IH D+KP ++L+ ++DFG S
Sbjct: 123 LADALHYCH----ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 158
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVL 183
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 155
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL 180
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 155
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 155
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL 180
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 343 AGSFGSVYKGTISDGTDV-AIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG+VY + A+K+ L++E E E+ ++RH N++++ +
Sbjct: 25 KGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF 84
Query: 399 STPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+F P G L K L H F D M ++ L Y H +IH
Sbjct: 85 HDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCH----ERKVIHR 139
Query: 454 DLKPTSILLDENMVAHVSDFGIS 476
D+KP ++L+ ++DFG S
Sbjct: 140 DIKPENLLMGYKGELKIADFGWS 162
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGS-VYKGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF + V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 41 GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 155
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 103 DDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 343 AGSFGSVYKGTISDGTDV-AIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG+VY + A+K+ L++E E E+ ++RH N++++ +
Sbjct: 24 KGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF 83
Query: 399 STPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+F P G L K L H F D M ++ L Y H +IH
Sbjct: 84 HDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCH----ERKVIHR 138
Query: 454 DLKPTSILLDENMVAHVSDFGIS 476
D+KP ++L+ ++DFG S
Sbjct: 139 DIKPENLLMGYKGELKIADFGWS 161
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 154
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVL 179
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 154
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVL 179
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ T + T VA+K + +F +E V++ ++H L+K+ + +
Sbjct: 25 AGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP 83
Query: 403 F----KFMPNGSLEKRLYSHNYFLDILERL-NIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+FM GSL L S L +L + + + ++ + IH DL+
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YIHRDLRA 139
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+IL+ ++V ++DFG+++++
Sbjct: 140 ANILVSASLVCKIADFGLARVI 161
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 80
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 81 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 135
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 136 LKPENILLNEDMHIQITDFGTAKVL 160
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ G ++ T VA+K + ++F E +++ ++H L+++ + + +
Sbjct: 23 AGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREE 81
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERL-NIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
++M GSL L S +L +L + + + Y+ + IH DL+
Sbjct: 82 PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRDLR 137
Query: 457 PTSILLDENMVAHVSDFGISKLL 479
++L+ E+++ ++DFG+++++
Sbjct: 138 AANVLVSESLMCKIADFGLARVI 160
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 331 IGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFN---LQRERAFRSFNSECEVLRNV 386
IG + ET+ GSFG V T VA+K + L++ E L+ +
Sbjct: 8 IGPYIIRETLG-EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL 66
Query: 387 RHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGS--------TL 438
RH ++IK+ +TP M L+ + I+E+ + D G +
Sbjct: 67 RHPHIIKLYDVITTPTDIVMVIEYAGGELFDY-----IVEKKRMTEDEGRRFFQQIICAI 121
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
EY H I+H DLKP ++LLD+N+ ++DFG+S ++ +
Sbjct: 122 EYCHRHK----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 39/158 (24%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIF------NLQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GS+G V K D G VAIK F + ++ A R E ++L+ +RH+NL+ +L
Sbjct: 36 GSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKLLKQLRHENLVNLLE 91
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLD--ILERLNIM---IDVGSTLEYLH--------- 442
C +KR Y F+D IL+ L + +D +YL
Sbjct: 92 VCKK-----------KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
H H+ IIH D+KP +IL+ ++ V + DFG ++ L
Sbjct: 141 HSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 25 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 84
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 85 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 139
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 140 LKPENILLNEDMHIQITDFGTAKVL 164
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG FG V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 6 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 64
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 65 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH +L+ +IL+ + + ++DFG+++L+
Sbjct: 125 N----YIHRNLRAANILVSDTLSCKIADFGLARLI 155
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 77
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 78 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 132
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 133 LKPENILLNEDMHIQITDFGTAKVL 157
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 79 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVL 158
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF +V ++ + AIKI + +E E +V+ + H +K+ +
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 79
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ + NG L K + F + R ++ S LEYLH IIH D
Sbjct: 80 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH----GKGIIHRD 134
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
LKP +ILL+E+M ++DFG +K+L
Sbjct: 135 LKPENILLNEDMHIQITDFGTAKVL 159
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILSSCSTP 401
G+FG V+ G + +D T VA+K ++ F E +L+ H N+++++ C+
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 402 D-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+ + G L + L + L ++ D + +EYL S IH DL
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL----ESKCCIHRDLA 240
Query: 457 PTSILLDENMVAHVSDFGISK 477
+ L+ E V +SDFG+S+
Sbjct: 241 ARNCLVTEKNVLKISDFGMSR 261
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ T + T VA+K + +F +E V++ ++H L+K+ + +
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP 256
Query: 403 F----KFMPNGSLEKRLYSHNYFLDILERL-NIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+FM GSL L S L +L + + + ++ + IH DL+
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YIHRDLRA 312
Query: 458 TSILLDENMVAHVSDFGISKLL 479
+IL+ ++V ++DFG+++++
Sbjct: 313 ANILVSASLVCKIADFGLARVI 334
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 333 ALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE----RAFRSFNSECEVLRNVRH 388
A + LE I G FG VY+ G +VA+K + + + E ++ ++H
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 389 QNLIKILSSC-STPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHH 443
N+I + C P+ +F G L + L DIL +N + + + YLH
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHD 123
Query: 444 GHSSAPIIHCDLKPTSILLDE--------NMVAHVSDFGISK 477
+ PIIH DLK ++IL+ + N + ++DFG+++
Sbjct: 124 -EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILSSCSTP 401
G+FG V+ G + +D T VA+K ++ F E +L+ H N+++++ C+
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 402 D-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+ + G L + L + L ++ D + +EYL S IH DL
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL----ESKCCIHRDLA 240
Query: 457 PTSILLDENMVAHVSDFGISK 477
+ L+ E V +SDFG+S+
Sbjct: 241 ARNCLVTEKNVLKISDFGMSR 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 83 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 136
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 89 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 142
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 79 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 132
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 89 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 142
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 59 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 118
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 119 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 174
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 29 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 88
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 89 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 144
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGLAKLLG 172
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 60 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 119
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 120 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 175
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 87 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLG 170
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 33 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 92
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 93 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 148
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 88 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 143
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLG 171
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 155
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 79 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 132
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 83 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 136
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 92 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 147
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLG 175
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 38 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 97
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 98 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 153
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 26 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 85
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 86 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 141
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLG 169
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 156
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 349 VYKGTISDGTDVAIKIFNLQRER--------AFRSFNSECEVLRNVR-HQNLIKILSSCS 399
V++ T G + A+KI + ER + E +LR V H ++I ++ S
Sbjct: 114 VHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 400 TPDFKF-----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ F F M G L L + L E +IM + + +LH + I+H D
Sbjct: 171 SSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANN----IVHRD 225
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
LKP +ILLD+NM +SDFG S
Sbjct: 226 LKPENILLDDNMQIRLSDFGFS 247
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILS 396
GSFG V +G VA+K L + A F E + ++ H+NLI++
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 397 SCSTPDFKFM----PNGSLEKRLYSH--NYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
TP K + P GSL RL H ++ L L R + + G + YL S
Sbjct: 79 VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG--MGYL----ESKRF 132
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH DL ++LL + + DFG+ + L
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 26 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 85
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 86 ICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 141
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLG 169
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 92 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 147
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLG 175
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 88 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 143
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLG 171
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 154
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 87 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLG 170
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 12/144 (8%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIK---ILSS 397
G FG K T + +V + + L R E R+F E +V+R + H N++K +L
Sbjct: 20 KGCFGQAIKVTHRETGEVMV-MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK 78
Query: 398 CSTPDF--KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
+F +++ G+L + S + +R++ D+ S + YLH S IIH DL
Sbjct: 79 DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH----SMNIIHRDL 134
Query: 456 KPTSILLDENMVAHVSDFGISKLL 479
+ L+ EN V+DFG+++L+
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLM 158
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 88 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 143
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLG 171
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 92 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 147
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLG 175
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV 386
+ T+ + L G +G V++G+ G +VA+KIF+ + E+ S+ E E+ V
Sbjct: 31 VQRTVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEK---SWFRETELYNTV 86
Query: 387 --RHQNLIKILSSCSTPDFK---------FMPNGSLEKRLYSHNYFLDILERLNIMIDVG 435
RH+N++ ++S T + GSL Y LD + L I++ +
Sbjct: 87 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIA 144
Query: 436 STLEYLH---HGHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
S L +LH G P I H DLK +IL+ +N ++D G++
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 156
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 85 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLG 168
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 95
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 96 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 151
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V ++YL +S +H
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASKKFVH 155
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
AG FG V+ T + T VA+K + +F +E V++ ++H L+K+ + +
Sbjct: 192 AGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP 250
Query: 403 F----KFMPNGSLEKRLYSHNYFLDILERL-NIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+FM GSL L S L +L + + + ++ + IH DL+
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YIHRDLRA 306
Query: 458 TSILLDENMVAHVSDFGISKL 478
+IL+ ++V ++DFG++++
Sbjct: 307 ANILVSASLVCKIADFGLARV 327
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 87
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 88 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 143
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLG 171
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 85 ICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLG 168
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 31 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 90
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 91 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 146
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLG 174
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 85 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLG 168
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 85 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLG 168
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 22 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 81
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 82 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR----LVH 137
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLG 165
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 50 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 109
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 110 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 165
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLG 193
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 335 VDLETISL-----AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ 389
V ET+ L AG G V+ G + T VA+K Q + +F +E +++ ++HQ
Sbjct: 10 VPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQ 68
Query: 390 NLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYF-LDILERLNIMIDVGSTLEYLHHG 444
L+++ + + ++M NGSL L + + L I + L++ + + ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ IH DL+ +IL+ + + ++DFG+++L+
Sbjct: 129 N----YIHRDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 35 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 94
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 95 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 150
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLG 178
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 85 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLG 168
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 343 AGSFGSVYKGTISDGTDV-AIKIFNLQR--ER-AFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V +D + A+K N Q+ ER R+ E ++++ + H L+ + S
Sbjct: 25 KGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF 84
Query: 399 STPDFKFMP-----NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ FM G L L + +F + +L I ++ L+YL + IIH
Sbjct: 85 QDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CELVMALDYLQNQR----IIHR 139
Query: 454 DLKPTSILLDENMVAHVSDFGISKLL 479
D+KP +ILLDE+ H++DF I+ +L
Sbjct: 140 DMKPDNILLDEHGHVHITDFNIAAML 165
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKGTIS-DG--TDVAIK-IFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSC 398
G+FG V K I DG D AIK + + R F E EVL + H N+I +L +C
Sbjct: 33 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 92
Query: 399 STPDF-----KFMPNGSL-----EKRLYSHNYFLDIL----------ERLNIMIDVGSTL 438
+ ++ P+G+L + R+ + I + L+ DV +
Sbjct: 93 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 152
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+YL S IH +L +IL+ EN VA ++DFG+S+
Sbjct: 153 DYL----SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 19 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 78
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 79 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 134
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG++KLLG
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLG 162
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKIL-- 395
G++G VYK S G VA+K L E A R E +L+ + H N++ ++
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKELHHPNIVSLIDV 87
Query: 396 ---SSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T F+FM L+K L + L + I I + L + H H I+H
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHR-ILH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ + ++DFG+++ G
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKIL-- 395
G++G VYK S G VA+K L E A R E +L+ + H N++ ++
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKELHHPNIVSLIDV 87
Query: 396 ---SSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T F+FM L+K L + L + I I + L + H H I+H
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHR-ILH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ + ++DFG+++ G
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV--RHQNLIKILSSCSTP 401
G +G V++G+ G +VA+KIF+ + E+ S+ E E+ V RH+N++ ++S T
Sbjct: 19 GRYGEVWRGSWQ-GENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 402 DFK---------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH---HGHSSAP 449
+ GSL Y LD + L I++ + S L +LH G P
Sbjct: 75 RHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 450 II-HCDLKPTSILLDENMVAHVSDFGIS 476
I H DLK +IL+ +N ++D G++
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV--RHQNLIKILSSCSTP 401
G +G V++G+ G +VA+KIF+ + E+ S+ E E+ V RH+N++ ++S T
Sbjct: 19 GRYGEVWRGSWQ-GENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 402 DFK---------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH---HGHSSAP 449
+ GSL Y LD + L I++ + S L +LH G P
Sbjct: 75 RHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 450 II-HCDLKPTSILLDENMVAHVSDFGIS 476
I H DLK +IL+ +N ++D G++
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 26/163 (15%)
Query: 336 DLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ--- 389
D E I++ G+FG V K + D AIK E + SE +L ++ HQ
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 390 ----------NLIKILSSCSTP-----DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDV 434
N +K +++ ++ NG+L ++S N E + +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
L Y+H S IIH DLKP +I +DE+ + DFG++K
Sbjct: 126 LEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 344 GSFGSV----YKGTISDGTD--VAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILS 396
G FG V Y T +DGT VA+K RS + E ++LR + H+++IK
Sbjct: 25 GHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG 83
Query: 397 SCSTPDFK-------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
C K ++P GSL L H+ + + + L + + YLH H
Sbjct: 84 CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH---- 137
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
IH +L ++LLD + + + DFG++K + E
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 344 GSFGSV----YKGTISDGTD--VAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILS 396
G FG V Y T +DGT VA+K RS + E ++LR + H+++IK
Sbjct: 25 GHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG 83
Query: 397 SCSTPDFK-------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
C K ++P GSL L H+ + + + L + + YLH H
Sbjct: 84 CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHSQH---- 137
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
IH +L ++LLD + + + DFG++K + E
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 46 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 105
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 106 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 161
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 159
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 160 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 215
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 157
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 156
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 87 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG +KLLG
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLG 170
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 157
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 87 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG +KLLG
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLG 170
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 156
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRN--VRHQNLIKIL--SSCS 399
G +G+VYKG++ D VA+K+F+ + +F +E + R + H N+ + +
Sbjct: 24 GRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 400 TPD--------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHH-----GHS 446
T D ++ PNGSL K L H D + + V L YLH H
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H DL ++L+ + +SDFG+S L
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 29 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 88
Query: 397 SCSTPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 89 ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 144
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG +KLLG
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGRAKLLG 172
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRER---AFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY GT+ +DG + + +L R F +E ++++ H N++ +L C
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
+ +M +G L + + + + + + + V +++L +S +H
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASKKFVH 154
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE V+DFG+++
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 92 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 147
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG +KLLG
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLG 175
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 86
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 87 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG +KLLG
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLG 170
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQ-RE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I +G V I + + RE +A + E V+ +V + ++ ++L
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + H + LN + + + YL ++H
Sbjct: 85 ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVH 140
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DL ++L+ ++DFG +KLLG
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLG 168
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 360 VAIKIFNL---QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411
VAIK + ++E + F E + HQN++ ++ D +++ +L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVS 471
+ + SH L + +N L+ + H H I+H D+KP +IL+D N +
Sbjct: 99 SEYIESHGP-LSVDTAINF---TNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKIF 153
Query: 472 DFGISKLLGE 481
DFGI+K L E
Sbjct: 154 DFGIAKALSE 163
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 25/155 (16%)
Query: 340 ISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEV--LRNVRHQNLIKILSS 397
+ G FG V+K + + VA+KIF +Q ++ S+ +E EV L ++H+N+++ + +
Sbjct: 31 VKARGRFGCVWKAQLLNEY-VAVKIFPIQDKQ---SWQNEYEVYSLPGMKHENILQFIGA 86
Query: 398 ---CSTPDFK------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHH----- 443
++ D F GSL L ++ + E +I + L YLH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 444 --GHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
GH A I H D+K ++LL N+ A ++DFG++
Sbjct: 145 KDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 331 IGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSFNSECEVL 383
IG L+TI G+F V I G +VA+KI + + ++ FR E ++
Sbjct: 6 IGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR----EVRIM 60
Query: 384 RNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTL 438
+ + H N++K+ T ++ G + L +H + + R + S +
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAV 119
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 120 QYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSF 376
S D IG L+TI G+F V I G +VA+KI + + ++ FR
Sbjct: 6 SADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-- 62
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 63 --EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 121 -QIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSF 376
S D IG L+TI G+F V I G +VA+KI + + ++ FR
Sbjct: 6 SADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-- 62
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 63 --EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 121 -QIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSF 376
S D IG L+TI G+F V I G +VA+KI + + ++ FR
Sbjct: 6 SADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-- 62
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 63 --EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 121 -QIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 344 GSFGSV----YKGTISDGTD--VAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILS 396
G FG V Y T +DGT VA+K RS + E E+LR + H++++K
Sbjct: 20 GHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG 78
Query: 397 SCSTPDFK-------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
C K ++P GSL R Y + + + + L + + YLH H
Sbjct: 79 CCEDQGEKSVQLVMEYVPLGSL--RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH---- 132
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
IH L ++LLD + + + DFG++K + E
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 344 GSFGSV----YKGTISDGTD--VAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILS 396
G FG V Y T +DGT VA+K RS + E E+LR + H++++K
Sbjct: 19 GHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG 77
Query: 397 SCSTPDFK-------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
C K ++P GSL R Y + + + + L + + YLH H
Sbjct: 78 CCEDQGEKSVQLVMEYVPLGSL--RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH---- 131
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
IH L ++LLD + + + DFG++K + E
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 344 GSFGSVYK-GTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G FG V+K + G +A KI + + +E V+ + H NLI++ + + +
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 159
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+++ G L R+ +Y L L+ + M + + ++H + I+H DLKP
Sbjct: 160 DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY----ILHLDLKP 215
Query: 458 TSILLDENMVAHVS--DFGISK 477
+IL + DFG+++
Sbjct: 216 ENILCVNRDAKQIKIIDFGLAR 237
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 27/171 (15%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVL 383
SG +P G+L LE I G FG V+K + + VA+KIF LQ ++ S+ SE E+
Sbjct: 9 SGLVPR--GSLQLLE-IKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQ---SWQSEREIF 61
Query: 384 RN--VRHQNLIKILSSCSTPD---------FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
++H+NL++ +++ F GSL Y + E ++
Sbjct: 62 STPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAE 119
Query: 433 DVGSTLEYLHH------GHSSAP-IIHCDLKPTSILLDENMVAHVSDFGIS 476
+ L YLH G P I H D K ++LL ++ A ++DFG++
Sbjct: 120 TMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 330 TIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV--R 387
T+ V L G +G V++G + G VA+KIF+ + E+ S+ E E+ V R
Sbjct: 5 TVARQVALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQ---SWFRETEIYNTVLLR 60
Query: 388 HQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNY----FLDILER--------LNIMIDVG 435
H N++ ++S T N S + L +H + D L+R L + +
Sbjct: 61 HDNILGFIASDMTSR-----NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAA 115
Query: 436 STLEYLH---HGHSSAPII-HCDLKPTSILLDENMVAHVSDFGIS 476
L +LH G P I H D K ++L+ N+ ++D G++
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 343 AGSFGSVYKGT-ISDGTD----VAIKIFNLQRER-AFRSFNSECEVLRNVRHQNLIKILS 396
+G FG+V+KG I +G V IK+ + R +F++ + ++ H +++++L
Sbjct: 23 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82
Query: 397 SCSTPDFK----FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH-HGHSSAPII 451
C + ++P GSL + H L LN + + + YL HG ++
Sbjct: 83 LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG-----MV 137
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H +L ++LL V+DFG++ LL
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLL 165
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + + +AF+ N E +++R + H N++++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVRL-------R 79
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSF 376
S D IG L+TI G+F V I G +VA++I + + ++ FR
Sbjct: 6 SADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-- 62
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 63 --EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 121 -QIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + + +AF+ N E +++R + H N++++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVRL-------R 79
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 140 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSF 376
S D IG L+TI G+F V I G +VA++I + + ++ FR
Sbjct: 6 SADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-- 62
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 63 --EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 121 -QIVSAVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 343 AGSFGSVYKGT-ISDGTD----VAIKIFNLQRER-AFRSFNSECEVLRNVRHQNLIKILS 396
+G FG+V+KG I +G V IK+ + R +F++ + ++ H +++++L
Sbjct: 41 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 100
Query: 397 SCSTPDFK----FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH-HGHSSAPII 451
C + ++P GSL + H L LN + + + YL HG ++
Sbjct: 101 LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG-----MV 155
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H +L ++LL V+DFG++ LL
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLL 183
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 318 LSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAI-KIFNLQRERAFRSF 376
++R+ D IG L D G+FG VYK + + +A K+ + + E +
Sbjct: 29 VTRDLNPEDFWEIIGELGD-------GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILER---- 427
E ++L + H N++K+L + + +F G+++ + LER
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-------LERPLTE 134
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
I + TL+ L++ H + IIH DLK +IL + ++DFG+S
Sbjct: 135 SQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 318 LSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAI-KIFNLQRERAFRSF 376
++R+ D IG L D G+FG VYK + + +A K+ + + E +
Sbjct: 29 VTRDLNPEDFWEIIGELGD-------GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILER---- 427
E ++L + H N++K+L + + +F G+++ + LER
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-------LERPLTE 134
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
I + TL+ L++ H + IIH DLK +IL + ++DFG+S
Sbjct: 135 SQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 36 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRL-------R 84
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 145 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 343 AGSFGSVYKGT-ISDGTDVAIKI-FNLQRE----RAFRSFNSECEVLRNVRHQNLIKILS 396
+G+FG+VYKG I DG +V I + + RE +A + E V+ V + ++L
Sbjct: 27 SGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLG 86
Query: 397 SCSTPDFKF----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
C T + MP G L + + L + LN + + + YL ++H
Sbjct: 87 ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE----DVRLVH 142
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLL 479
DL ++L+ ++DFG+++LL
Sbjct: 143 RDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 336 DLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ--- 389
D E I++ G+FG V K + D AIK E + SE +L ++ HQ
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 390 ----------NLIKILSSCSTP-----DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDV 434
N +K +++ ++ N +L ++S N E + +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
L Y+H S IIH DLKP +I +DE+ + DFG++K
Sbjct: 126 LEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 110 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRL-------R 158
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 219 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 61 LPNIKY--LELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118
+PNI Y +EL + +P S N LDL FN +F + L VL L
Sbjct: 7 VPNITYQCMELNFYKIPDNLPFSTKN------LDLSFNPLRHLGSYSFFSFPELQVLDLS 60
Query: 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASE 176
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 61 RCEIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVE 109
Query: 177 CKLKGTIPKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQG 229
L IGHL+ L L++ N + +P L L+ L +Q
Sbjct: 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 318 LSRNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAI-KIFNLQRERAFRSF 376
++R+ D IG L D G+FG VYK + + +A K+ + + E +
Sbjct: 29 VTRDLNPEDFWEIIGELGD-------GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILER---- 427
E ++L + H N++K+L + + +F G+++ + LER
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-------LERPLTE 134
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
I + TL+ L++ H + IIH DLK +IL + ++DFG+S
Sbjct: 135 SQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLN 429
S +E VLR ++H+N++ + +P+ + + G L R+ ++ + +
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-KDAST 124
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
++ V + YLH I+H DLKP ++L DE +SDFG+SK+ G+
Sbjct: 125 LIRQVLDAVYYLHR----MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK 175
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 323 LSGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRS 375
+ D IG L+TI G+F V I G +VAIKI + + ++ FR
Sbjct: 3 MGSDEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR- 60
Query: 376 FNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNI 430
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 61 ---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF 117
Query: 431 MIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 118 R-QIVSAVQYCHQKR----IVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 35 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 90
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 91 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 146
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 147 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 59 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLR------- 107
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 168 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + + +AF+ N E +++R + H N++++ SS
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 87 EKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 142
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 32 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 87
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 88 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 143
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 144 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 87 EKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 142
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 142
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 44 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRL-------R 92
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 153 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 69 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLR------- 117
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 178 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 65 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLR------- 113
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 174 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 142
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 142
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G++G VY G +S+ +AIK + R + + E + ++++H+N+++ L S S
Sbjct: 19 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG 78
Query: 403 F-----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
F + +P GSL L S L E+ I LE L + H + I+H D+K
Sbjct: 79 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQ-IVHRDIKG 136
Query: 458 TSILLDE-NMVAHVSDFGISKLLG 480
++L++ + V +SDFG SK L
Sbjct: 137 DNVLINTYSGVLKISDFGTSKRLA 160
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 65 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLR------- 113
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 174 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 43 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRL-------R 91
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 152 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 67 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLR------- 115
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 176 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAI-KIFNLQRERAFRSFNSECEVLRNVRHQNLIKILS 396
E I G FG VYK + + +A K+ + + E + E ++L + H N++K+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILER----LNIMIDVGSTLEYLHHGHSS 447
+ + +F G+++ + LER I + TL+ L++ H +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGIS 476
IIH DLK +IL + ++DFG+S
Sbjct: 128 K-IIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSC 398
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++ SS
Sbjct: 43 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRLRYFFYSSG 98
Query: 399 STPD-------FKFMPNGSLE-KRLYSH-NYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
D ++P R YS L ++ M + +L Y+H S
Sbjct: 99 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFG 154
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K L
Sbjct: 155 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSYCH----SKRVIHRD 137
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL N ++DFG S
Sbjct: 138 IKPENLLLGSNGELKIADFGWS 159
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 120
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 121 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 168
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFN-SECEVLRNVRHQNLIKILSSCSTP 401
G++ +VYKG + G VA+K L E S E +++ ++H+N++++ T
Sbjct: 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE 75
Query: 402 D-----FKFMPNGSLEKRLYSHNY-------FLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+ F+FM N L+K + S L++++ + G L + H
Sbjct: 76 NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG--LAFCHENK---- 128
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
I+H DLKP ++L+++ + DFG+++ G
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 39 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRL-------R 87
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 148 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 121
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 122 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 127
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 128 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 175
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 121
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 122 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VY+ + D G VAIK + +++ F+ N E +++R + H N++++
Sbjct: 50 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVRL-------R 98
Query: 403 FKFMPNGSLEKRLYSH---NYFLDILERLN-----------------IMIDVGSTLEYLH 442
+ F +G + +Y + +Y + + R+ M + +L Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 443 HGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
S I H D+KP ++LLD + V + DFG +K L
Sbjct: 159 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 325 GDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSFN 377
D IG L+TI G+F V I G +VAIKI + + ++ FR
Sbjct: 8 ADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR--- 63
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
E +++ + H N++K+ T ++ G + L +H + R
Sbjct: 64 -EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR- 121
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD +M ++DFG S
Sbjct: 122 QIVSAVQYCHQKR----IVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 121
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 122 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSYCH----SKRVIHRD 137
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL N ++DFG S
Sbjct: 138 IKPENLLLGSNGELKIADFGWS 159
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 260
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 261 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 308
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G++G VY G +S+ +AIK + R + + E + ++++H+N+++ L S S
Sbjct: 33 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG 92
Query: 403 F-----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
F + +P GSL L S L E+ I LE L + H + I+H D+K
Sbjct: 93 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQ-IVHRDIKG 150
Query: 458 TSILLDE-NMVAHVSDFGISKLLG 480
++L++ + V +SDFG SK L
Sbjct: 151 DNVLINTYSGVLKISDFGTSKRLA 174
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPDF----KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E E+L+ + H +IKI + D+ + M G L ++ + + +L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 246
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLLGE 481
+ ++YLH IIH DLKP ++LL +E+ + ++DFG SK+LGE
Sbjct: 247 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + K L + F D + ++ + L Y H S +IH D
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 139 IKPENLLLGSAGELKIADFGWS 160
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 61 LPNIKY--LELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118
+PNI Y +EL + +P S N LDL FN +F + L VL L
Sbjct: 9 VPNITYQCMELNFYKIPDNLPFSTKN------LDLSFNPLRHLGSYSFFSFPELQVLDLS 62
Query: 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASE 176
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 63 RCEIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVALE 111
Query: 177 CKLKGTIPKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQG 229
L IGHL+ L L++ N + +P L L+ L +Q
Sbjct: 112 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 329 STIGALVDLETISLAGSFG-SVYKGTISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRN 385
++ V L+ I GSFG ++ + DG IK N+ R + E VL N
Sbjct: 21 QSMEKYVRLQKIG-EGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 386 VRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN----IMIDVGSTLEY- 440
++H N+++ S F NGSL + + D+ +R+N ++ L++
Sbjct: 80 MKHPNIVQYRES-------FEENGSLYI-VMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 441 ------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
L H H I+H D+K +I L ++ + DFGI+++L
Sbjct: 132 VQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 26/156 (16%)
Query: 344 GSFGSVYKGTI--SDGTDVAIKIFNLQRE----RAFRSFNSECEVLRNVRHQNLIKILSS 397
G FGSV + + DG+ V + + L+ + F E ++ H ++ K++
Sbjct: 34 GEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGV 93
Query: 398 CSTPDFK-----------FMPNGSLEK-----RLYSHNYFLDILERLNIMIDVGSTLEYL 441
K FM +G L R+ + + L + + M+D+ +EYL
Sbjct: 94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL 153
Query: 442 HHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
SS IH DL + +L E+M V+DFG+S+
Sbjct: 154 ----SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+PNI Y + N IP+++ +TK LDL FN +F + L VL L
Sbjct: 31 VPNITYQCMELN--FYKIPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 86
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASECK 178
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 87 EIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVETN 135
Query: 179 LKGTIPKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQG 229
L IGHL+ L L++ N + +P L L+ L +Q
Sbjct: 136 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 33 IFN-ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIIL 91
IFN +S++ L + GN + I L N+ +L+L L P + + + L +L
Sbjct: 464 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523
Query: 92 DLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLT 139
++ N F + L L VL +N++ T Q F SSL
Sbjct: 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ-HFPSSLA 570
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+FG VYK + G A K+ + E + E E+L H ++K+L +
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 81
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDI-LERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+F P G+++ + LD L I + LE L+ HS IIH DLK
Sbjct: 82 KLWIMIEFCPGGAVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLK 136
Query: 457 PTSILLDENMVAHVSDFGIS 476
++L+ ++DFG+S
Sbjct: 137 AGNVLMTLEGDIRLADFGVS 156
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + K L + F D + ++ + L Y H S +IH D
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 139 IKPENLLLGSAGELKIADFGWS 160
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 343 AGSFGSVYKGTI---SDGTDVAIKIFNLQRERA-FRSFNSECEVLRNVRHQNLIKILSSC 398
G+FGSV +G DVAIK+ E+A E +++ + + +++++ C
Sbjct: 20 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 79
Query: 399 STPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ G L K L + + ++ V ++YL + +H D
Sbjct: 80 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FVHRD 135
Query: 455 LKPTSILLDENMVAHVSDFGISKLLG 480
L ++LL A +SDFG+SK LG
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALG 161
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKI 394
LE I G++G VYK + G A+K L++E + E +L+ ++H N++K+
Sbjct: 7 LEKIG-EGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 395 LSSCSTPDFKFMPNGSLEKRLYSHNYFLDILE-------RLNIMIDVGSTLEYLHHGHSS 447
T + L++ L LD+ E + ++ + + + Y H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKK---LLDVCEGGLESVTAKSFLLQLLNGIAYCH----D 118
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
++H DLKP ++L++ ++DFG+++ G
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKI 394
LE I G++G VYK + G A+K L++E + E +L+ ++H N++K+
Sbjct: 7 LEKIG-EGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 395 LSSCSTPDFKFMPNGSLEKRLYSHNYFLDILE-------RLNIMIDVGSTLEYLHHGHSS 447
T + L++ L LD+ E + ++ + + + Y H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKK---LLDVCEGGLESVTAKSFLLQLLNGIAYCH----D 118
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
++H DLKP ++L++ ++DFG+++ G
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 337 LETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAF--RSFNSECEVLRNVRHQNLIKI 394
LE I G++G VYK + G A+K L++E + E +L+ ++H N++K+
Sbjct: 7 LEKIG-EGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 395 LSSCSTPDFKFMPNGSLEKRLYSHNYFLDILE-------RLNIMIDVGSTLEYLHHGHSS 447
T + L++ L LD+ E + ++ + + + Y H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKK---LLDVCEGGLESVTAKSFLLQLLNGIAYCH----D 118
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
++H DLKP ++L++ ++DFG+++ G
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+PNI Y + N IP+++ +TK LDL FN +F + L VL L
Sbjct: 7 VPNITYQCMELN--FYKIPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 62
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASECK 178
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 63 EIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVETN 111
Query: 179 LKGTIPKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQG 229
L IGHL+ L L++ N + +P L L+ L +Q
Sbjct: 112 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 33 IFN-ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIIL 91
IFN +S++ L + GN + I L N+ +L+L L P + + + L +L
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 92 DLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQ 131
++ N F + L L VL +N++ T Q
Sbjct: 500 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 539
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 72/185 (38%), Gaps = 37/185 (20%)
Query: 43 NLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL--IGTIPNSITNATKLIILDLGFN---- 96
N GGN S LP++++L+L N L G S T L LDL FN
Sbjct: 335 NKGGNAFSEV-------DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387
Query: 97 ---TFSG-----HIPNTFGNLRHLSVLSLLMN--NLT------TESSSAYQWSF--LSSL 138
F G H+ NL+ +S S+ ++ NL T + A+ F LSSL
Sbjct: 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 447
Query: 139 TNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSL 198
L ++GN P I +L S+C+L+ P L L L++
Sbjct: 448 E------VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501
Query: 199 GFNDL 203
N+
Sbjct: 502 SHNNF 506
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+PNI Y + N IP+++ +TK LDL FN +F + L VL L
Sbjct: 7 VPNITYQCMELN--FYKIPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 62
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASECK 178
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 63 EIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVETN 111
Query: 179 LKGTIPKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQG 229
L IGHL+ L L++ N + +P L L+ L +Q
Sbjct: 112 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 77/204 (37%), Gaps = 37/204 (18%)
Query: 43 NLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL--IGTIPNSITNATKLIILDLGFN---- 96
N GGN S LP++++L+L N L G S T L LDL FN
Sbjct: 335 NKGGNAFSEV-------DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387
Query: 97 ---TFSG-----HIPNTFGNLRHLSVLSLLMN--NLT------TESSSAYQWSF--LSSL 138
F G H+ NL+ +S S+ ++ NL T + A+ F LSSL
Sbjct: 388 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 447
Query: 139 TNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSL 198
L ++GN P I +L S+C+L+ P L L L++
Sbjct: 448 E------VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501
Query: 199 GFNDLNGTIPTSIGTLKQLQGFFL 222
N L L LQ +L
Sbjct: 502 ASNQLKSVPDGIFDRLTSLQKIWL 525
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSC 398
G+FGSV + D T + + LQ R F E ++L+ + ++K
Sbjct: 34 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 93
Query: 399 STPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
P +++P+G L L H LD L + +EYL S +
Sbjct: 94 YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSRRCV 149
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H DL +IL++ ++DFG++KLL
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+PNI Y + + N IP+++ +TK LDL FN +F + L VL L
Sbjct: 8 VPNITY-QCEELNFY-KIPDNLPFSTK--NLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 63
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASECK 178
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 64 EIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVETN 112
Query: 179 LKGTIPKEIGHLRGLIYLSLGFNDLNG-TIPTSIGTLKQLQGFFLPETNLQG 229
L IGHL+ L L++ N + +P L L+ L +Q
Sbjct: 113 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSC 398
G+FGSV + D T + + LQ R F E ++L+ + ++K
Sbjct: 22 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 81
Query: 399 STPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
P +++P+G L L H LD L + +EYL S +
Sbjct: 82 YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSRRCV 137
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H DL +IL++ ++DFG++KLL
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+PNI Y + D L +P+ I ++TK I DL FN +F N L L L
Sbjct: 6 VPNITY-QCMDQKL-SKVPDDIPSSTKNI--DLSFNPLKILKSYSFSNFSELQWLDLSRC 61
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASECK 178
+ T A W L L+N LIL+GNP+ P G+FS TSL+ A E K
Sbjct: 62 EIETIEDKA--WHGLHHLSN------LILTGNPIQSFSP---GSFSGLTSLENLVAVETK 110
Query: 179 LKGTIPKEIGHLRGLIYLSLGFN 201
L IG L L L++ N
Sbjct: 111 LASLESFPIGQLITLKKLNVAHN 133
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+FG VYK + G A K+ + E + E E+L H ++K+L +
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 89
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDI-LERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+F P G+++ + LD L I + LE L+ HS IIH DLK
Sbjct: 90 KLWIMIEFCPGGAVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLK 144
Query: 457 PTSILLDENMVAHVSDFGIS 476
++L+ ++DFG+S
Sbjct: 145 AGNVLMTLEGDIRLADFGVS 164
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
+PNI Y + D L +P+ I ++TK I DL FN +F N L L L
Sbjct: 11 VPNITY-QCMDQKL-SKVPDDIPSSTKNI--DLSFNPLKILKSYSFSNFSELQWLDLSRC 66
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASECK 178
+ T A W L L+N LIL+GNP+ P G+FS TSL+ A E K
Sbjct: 67 EIETIEDKA--WHGLHHLSN------LILTGNPIQSFSP---GSFSGLTSLENLVAVETK 115
Query: 179 LKGTIPKEIGHLRGLIYLSLGFN 201
L IG L L L++ N
Sbjct: 116 LASLESFPIGQLITLKKLNVAHN 138
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILS 396
ETI G I G VAIKI + +E E L+N+RHQ++ ++
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 397 SCSTPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
T + FM P G L + S + + R+ + + S + Y+H S
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH----SQGYA 130
Query: 452 HCDLKPTSILLDENMVAHVSDFGI 475
H DLKP ++L DE + DFG+
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSC 398
G+FGSV + D T + + LQ R F E ++L+ + ++K
Sbjct: 21 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 80
Query: 399 STPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
P +++P+G L L H LD L + +EYL S +
Sbjct: 81 YGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSRRCV 136
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H DL +IL++ ++DFG++KLL
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQ---RERAFRSFNSECEVL-RNVRHQNLIKILSSC 398
GSFG V ++ A+K+ + +++ + SE VL +NV+H L+ + S
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 108
Query: 399 STPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
T D ++ G L L FL+ R ++ S L YLH S I++
Sbjct: 109 QTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH----SLNIVYR 163
Query: 454 DLKPTSILLDENMVAHVSDFGISK 477
DLKP +ILLD ++DFG+ K
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 357 GTDVAIKIFNLQR------ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKF 405
G +VA+KI + + ++ FR E +++ + H N++K+ T ++
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIVKLFEVIETEKTLYLVMEY 95
Query: 406 MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN 465
G + L +H + R + S ++Y H + I+H DLK ++LLD +
Sbjct: 96 ASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY----IVHRDLKAENLLLDGD 150
Query: 466 MVAHVSDFGIS 476
M ++DFG S
Sbjct: 151 MNIKIADFGFS 161
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 344 GSFGSV---YKGTISDGTDVAIKIFNLQRE--RAFRSFNSECEVLRNVRHQNLIKILSSC 398
G+FGSV + D T + + LQ R F E ++L+ + ++K
Sbjct: 18 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 77
Query: 399 STPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
P +++P+G L L H LD L + +EYL S +
Sbjct: 78 YGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSRRCV 133
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLL 479
H DL +IL++ ++DFG++KLL
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
G+F V + I G + A KI N ++ R + E + R ++H N++++ S S
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 74
Query: 401 PDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
F ++ G L + + + Y+ + + + LE ++H H + I+H DL
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNHCHLNG-IVHRDL 129
Query: 456 KPTSILL---DENMVAHVSDFGIS 476
KP ++LL + ++DFG++
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLA 153
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 24/151 (15%)
Query: 344 GSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI----LSSCS 399
GSFG V++ + + +VAIK + +++ F+ N E +++R V+H N++ + S+
Sbjct: 51 GSFGVVFQAKLVESDEVAIK--KVLQDKRFK--NRELQIMRIVKHPNVVDLKAFFYSNGD 106
Query: 400 TPDFKFMPNGSLE---KRLY-SHNYFLDILERLNI------MIDVGSTLEYLHHGHSSAP 449
D F+ N LE + +Y + ++ + + + + M + +L Y+H S
Sbjct: 107 KKDEVFL-NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH----SIG 161
Query: 450 IIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
I H D+KP ++LLD + V + DFG +K+L
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ + HQN+++ +
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIG 101
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 161
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 162 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
G+F V + I G + A KI N ++ R + E + R ++H N++++ S S
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 74
Query: 401 PDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
F ++ G L + + + Y+ + + + LE ++H H + I+H DL
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNHCHLNG-IVHRDL 129
Query: 456 KPTSILL---DENMVAHVSDFGIS 476
KP ++LL + ++DFG++
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLA 153
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GS G V T+ S G VA+K +L++++ +E ++R+ +H+N++++ +S D
Sbjct: 35 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD 94
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+F+ G+L + +H ++ + + + V L LH + +IH D+K
Sbjct: 95 ELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKS 148
Query: 458 TSILLDENMVAHVSDFG 474
SILL + +SDFG
Sbjct: 149 DSILLTHDGRVKLSDFG 165
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ + HQN+++ +
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIG 115
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 175
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 176 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 30/176 (17%)
Query: 320 RNQLSGDIPSTIGALVDLETISLAGSFGSVYKGTI-SDGTDVAIKIF------NLQRERA 372
R +++ DL+ + +G++G+V G VAIK L +RA
Sbjct: 13 RQEVTKTAWEVRAVYRDLQPVG-SGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA 71
Query: 373 FRSFNSECEVLRNVRHQNLIKILSSCSTPD---------FKFMP-NGSLEKRLYSHNYFL 422
+R E +L+++RH+N+I +L TPD + MP G+ +L H
Sbjct: 72 YR----ELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG 126
Query: 423 DILERLNIMI-DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+ +R+ ++ + L Y+H +A IIH DLKP ++ ++E+ + DFG+++
Sbjct: 127 E--DRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GS G V T+ S G VA+K +L++++ +E ++R+ +H+N++++ +S D
Sbjct: 31 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD 90
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+F+ G+L + +H ++ + + + V L LH + +IH D+K
Sbjct: 91 ELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKS 144
Query: 458 TSILLDENMVAHVSDFG 474
SILL + +SDFG
Sbjct: 145 DSILLTHDGRVKLSDFG 161
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS------DGTDVAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S VA+K + E+ F E ++ HQN+++ +
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIG 115
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 175
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 176 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 33 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 92
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 93 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 152
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 153 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 343 AGSFGSVY-KGTISDGTDVAIKIFNLQRERA-FRSFNSECEVLRNVRHQNLIKILSSCST 400
+G+FG V+ S G + IK N R + +E EVL+++ H N+IKI
Sbjct: 32 SGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE- 90
Query: 401 PDFKFM-------PNGSLEKRLYSHNYFLDILER---LNIMIDVGSTLEYLHHGHSSAPI 450
D+ M G L +R+ S L +M + + L Y H H +
Sbjct: 91 -DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH----V 145
Query: 451 IHCDLKPTSILLDE---NMVAHVSDFGISKLL 479
+H DLKP +IL + + + DFG+++L
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 344 GSFGSVYKGT------ISDGTDVAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILS 396
G+FG V++ T VA+K+ + ++ F E ++ + N++K+L
Sbjct: 58 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLG 117
Query: 397 SCSTPD-----FKFMPNGSLEKRLYS----------HNYF-------------LDILERL 428
C+ F++M G L + L S H+ L E+L
Sbjct: 118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL 177
Query: 429 NIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
I V + + YL S +H DL + L+ ENMV ++DFG+S+
Sbjct: 178 CIARQVAAGMAYL----SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GS G V T+ S G VA+K +L++++ +E ++R+ +H+N++++ +S D
Sbjct: 42 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD 101
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+F+ G+L + +H ++ + + + V L LH + +IH D+K
Sbjct: 102 ELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKS 155
Query: 458 TSILLDENMVAHVSDFG 474
SILL + +SDFG
Sbjct: 156 DSILLTHDGRVKLSDFG 172
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 87/221 (39%), Gaps = 68/221 (30%)
Query: 61 LPNIKY--LELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118
+PNI Y +EL + +P S N LDL +N +F + L VL L
Sbjct: 9 VPNITYQCMELNFYKIPDNLPFSTKN------LDLSWNPLRHLGSYSFFSFPELQVLDLS 62
Query: 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASE 176
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 63 RCEIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVE 111
Query: 177 CKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXXX 236
L IGHL+ L L++ N +Q F LPE
Sbjct: 112 TNLASLENFPIGHLKTLKELNVAHN--------------LIQSFKLPEY----------- 146
Query: 237 XXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTS 277
++LT+L LDL SNK+ S
Sbjct: 147 ----------------------FSNLTNLEHLDLSSNKIQS 165
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 59 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 118
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 119 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 178
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 179 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 141
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 201
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 202 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 87/221 (39%), Gaps = 68/221 (30%)
Query: 61 LPNIKY--LELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118
+PNI Y +EL + +P S N LDL +N +F + L VL L
Sbjct: 8 VPNITYQCMELNFYKIPDNLPFSTKN------LDLSWNPLRHLGSYSFFSFPELQVLDLS 61
Query: 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFS--TSLQRFSASE 176
+ T AYQ SL+ +L LIL+GNP+ + ++G FS +SLQ+ A E
Sbjct: 62 RCEIQTIEDGAYQ-----SLS---HLSTLILTGNPIQSL---ALGAFSGLSSLQKLVAVE 110
Query: 177 CKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXXX 236
L IGHL+ L L++ N +Q F LPE
Sbjct: 111 TNLASLENFPIGHLKTLKELNVAHN--------------LIQSFKLPEY----------- 145
Query: 237 XXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTS 277
++LT+L LDL SNK+ S
Sbjct: 146 ----------------------FSNLTNLEHLDLSSNKIQS 164
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 336 DLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E I++ G+FG V K + D AIK E+ + SE +L ++ HQ ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVXLLASLNHQYVV 65
Query: 393 KILSSCSTPDFKFMPNGSLEKR-------LYSHNYFL-DIL--ERLNIMID-----VGST 437
+ ++ P +++K+ Y N L D++ E LN D
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 438 LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
LE L + HS IIH +LKP +I +DE+ + DFG++K
Sbjct: 126 LEALSYIHSQG-IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+ G+VY ++ G +VAI+ NLQ++ +E V+R ++ N++ L S D
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+++ GSL + +D + + + LE+LH S +IH D+K
Sbjct: 91 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKS 144
Query: 458 TSILLDENMVAHVSDFG 474
+ILL + ++DFG
Sbjct: 145 DNILLGMDGSVKLTDFG 161
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 357 GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411
G VA+K +L++++ +E ++R+ H N++ + SS D +F+ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 412 EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVS 471
+ +H ++ + + + V L YLH + +IH D+K SILL + +S
Sbjct: 130 TD-IVTHTR-MNEEQIATVCLSVLRALSYLH----NQGVIHRDIKSDSILLTSDGRIKLS 183
Query: 472 DFG 474
DFG
Sbjct: 184 DFG 186
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GS G V T+ S G VA+K +L++++ +E ++R+ +H+N++++ +S D
Sbjct: 85 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD 144
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+F+ G+L + +H ++ + + + V L LH + +IH D+K
Sbjct: 145 ELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKS 198
Query: 458 TSILLDENMVAHVSDFG 474
SILL + +SDFG
Sbjct: 199 DSILLTHDGRVKLSDFG 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 160
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 161 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 117
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 118 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 177
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 178 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GS G V T+ S G VA+K +L++++ +E ++R+ +H+N++++ +S D
Sbjct: 40 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD 99
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+F+ G+L + +H ++ + + + V L LH + +IH D+K
Sbjct: 100 ELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKS 153
Query: 458 TSILLDENMVAHVSDFG 474
SILL + +SDFG
Sbjct: 154 DSILLTHDGRVKLSDFG 170
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+ G+VY ++ G +VAI+ NLQ++ +E V+R ++ N++ L S D
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+++ GSL + +D + + + LE+LH S +IH D+K
Sbjct: 91 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKS 144
Query: 458 TSILLDENMVAHVSDFG 474
+ILL + ++DFG
Sbjct: 145 DNILLGMDGSVKLTDFG 161
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+ G+VY ++ G +VAI+ NLQ++ +E V+R ++ N++ L S D
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 90
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+++ GSL + +D + + + LE+LH S +IH D+K
Sbjct: 91 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKS 144
Query: 458 TSILLDENMVAHVSDFG 474
+ILL + ++DFG
Sbjct: 145 DNILLGMDGSVKLTDFG 161
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 101
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 161
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 162 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 101 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 160
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 161 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 343 AGSFGSVY-KGTISDGTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V+ + +G A+K+ + R + N E +L V H +I++ +
Sbjct: 16 TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF 75
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
FM G L L F + + + +V LEYLH S II+
Sbjct: 76 QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH----SKDIIYR 130
Query: 454 DLKPTSILLDENMVAHVSDFGISKLL 479
DLKP +ILLD+N ++DFG +K +
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 115
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 116 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 175
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 176 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 107
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 108 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 167
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 168 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 317 DLSRNQLSGDIPSTIGALVDLETISL--AGSFGSVYKGTISDGTDV-AIKI-FNLQRERA 372
+L+ Q + + AL D E G FG+VY + A+K+ F Q E+A
Sbjct: 16 ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 75
Query: 373 --FRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDIL 425
E E+ ++RH N++++ ++ P G++ + L + F D
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQ 134
Query: 426 ERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ ++ + L Y H S +IH D+KP ++LL ++DFG S
Sbjct: 135 RTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 344 GSFGSVYKGTISDGTDV----AIKIFNLQ----RERAFRSFNSECEVLRNVRHQNLIKIL 395
GSFG V+ G+D A+K+ R+R E ++L V H ++K+
Sbjct: 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV--RTKMERDILVEVNHPFIVKLH 92
Query: 396 SSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
+ T F+ G L RL F + + + ++ L++LH S I
Sbjct: 93 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH----SLGI 147
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISK 477
I+ DLKP +ILLDE ++DFG+SK
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+ G+VY ++ G +VAI+ NLQ++ +E V+R ++ N++ L S D
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 91
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+++ GSL + +D + + + LE+LH S +IH D+K
Sbjct: 92 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKS 145
Query: 458 TSILLDENMVAHVSDFG 474
+ILL + ++DFG
Sbjct: 146 DNILLGMDGSVKLTDFG 162
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFN-ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELG 70
L LK L+L N + IP FN I ++R L+LG + ++ L N++YL L
Sbjct: 135 LSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 193
Query: 71 DNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAY 130
NL IPN +T KL LDL N S P +F L HL L ++ + + +A+
Sbjct: 194 MCNL-REIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAF 251
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 325 GDIPSTIGALVDLETISL--AGSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNS 378
G + S AL D E G FG+VY + A+K+ F Q E+A
Sbjct: 1 GAMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 379 ECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMID 433
E E+ ++RH N++++ ++ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L Y H S +IH D+KP ++LL ++DFG S
Sbjct: 120 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 344 GSFGSVYKGTISDGTDV----AIKIFNLQ----RERAFRSFNSECEVLRNVRHQNLIKIL 395
GSFG V+ G+D A+K+ R+R E ++L V H ++K+
Sbjct: 36 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV--RTKMERDILVEVNHPFIVKLH 93
Query: 396 SSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
+ T F+ G L RL F + + + ++ L++LH S I
Sbjct: 94 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH----SLGI 148
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISK 477
I+ DLKP +ILLDE ++DFG+SK
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 49 LSGHLPSMIGHSLPNIKYLELGD--NNLIGTIPN-SITNATKLIILDLGFNTFSGHIPNT 105
L G+ +++ L N K+L L D NN I T+ N S +N T+L+ L L +N P T
Sbjct: 38 LDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRT 97
Query: 106 FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPL 154
F L+ L +LSL N+++ A+ + LS+L+ +L + NPL
Sbjct: 98 FDGLKSLRLLSLHGNDISVVPEGAF--NDLSALS------HLAIGANPL 138
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 127
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 128 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 187
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 188 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSC- 398
G FG+VY + + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 399 -STPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
ST + ++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKKVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 344 GSFGSVYKGT-ISDGTDVAIK---IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSS-- 397
G F VY+ + DG VA+K IF+L +A E ++L+ + H N+IK +S
Sbjct: 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI 102
Query: 398 -----------CSTPDF-KFMPNGSLEKRLYSHNYFLDILER--LNIMIDVGSTLEYLHH 443
D + + + +KRL I ER + + S LE++H
Sbjct: 103 EDNELNIVLELADAGDLSRMIKHFKKQKRL--------IPERTVWKYFVQLCSALEHMH- 153
Query: 444 GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
S ++H D+KP ++ + V + D G+ +
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 343 AGSFGSVYKGTI---SDGTDVAIKIFNLQRERA-FRSFNSECEVLRNVRHQNLIKILSSC 398
G+FGSV +G DVAIK+ E+A E +++ + + +++++ C
Sbjct: 346 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 405
Query: 399 STPD----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ G L K L + + ++ V ++YL + +H +
Sbjct: 406 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FVHRN 461
Query: 455 LKPTSILLDENMVAHVSDFGISKLLG 480
L ++LL A +SDFG+SK LG
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALG 487
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 139
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L YS+N + E+L+
Sbjct: 140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 200 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 344 GSFGSVYKGTISDGTD----VAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY G D AIK + + + +F E ++R + H N++ ++
Sbjct: 32 GHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIM 91
Query: 399 STPD------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
P+ +M +G L + + S + + ++ + V +EYL + +H
Sbjct: 92 LPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL----AEQKFVH 147
Query: 453 CDLKPTSILLDENMVAHVSDFGISK 477
DL + +LDE+ V+DFG+++
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLAR 172
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 137
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 138 IKPENLLLGSAGELKIADFGWS 159
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 317 DLSRNQLSGDIPSTIGALVDLETISL--AGSFGSVYKGTISDGTDV-AIKI-FNLQRERA 372
+L+ Q + + AL D E G FG+VY + A+K+ F Q E+A
Sbjct: 7 ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 66
Query: 373 --FRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDIL 425
E E+ ++RH N++++ ++ P G++ + L + F D
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQ 125
Query: 426 ERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ ++ + L Y H S +IH D+KP ++LL ++DFG S
Sbjct: 126 RTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 344 GSFGSVYKGTIS----DGTDVAIKIFNLQR---ERAFRSFNSECEVLRNVRHQNLIKIL- 395
G+FG VY+G +S D + + + + L E+ F E ++ HQN+++ +
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 101
Query: 396 -SSCSTPDF---KFMPNGSLEKRLY------SHNYFLDILERLNIMIDVGSTLEYLHHGH 445
S S P F + M G L+ L S L +L+ L++ D+ +YL H
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 161
Query: 446 SSAPIIHCDLKPTSILLD---ENMVAHVSDFGISK 477
IH D+ + LL VA + DFG+++
Sbjct: 162 ----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 325 GDIPSTIGALVDLETISL--AGSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNS 378
G + S AL D E G FG+VY + A+K+ F Q E+A
Sbjct: 1 GPLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 379 ECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMID 433
E E+ ++RH N++++ ++ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L Y H S +IH D+KP ++LL ++DFG S
Sbjct: 120 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 317 DLSRNQLSGDIPSTIGALVDLETISL--AGSFGSVYKGTISDGTDV-AIKI-FNLQRERA 372
+L+ Q + + AL D E G FG+VY + A+K+ F Q E+A
Sbjct: 16 ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 75
Query: 373 --FRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDIL 425
E E+ ++RH N++++ ++ P G++ + L + F D
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQ 134
Query: 426 ERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ ++ + L Y H S +IH D+KP ++LL ++DFG S
Sbjct: 135 RTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 134
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 135 IKPENLLLGSAGELKIADFGWS 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 77
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 78 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 132
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 133 IKPENLLLGSAGELKIADFGWS 154
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 344 GSFGSVYKGTISDGTDV----AIKIFNLQ----RERAFRSFNSECEVLRNVRHQNLIKIL 395
GSFG V+ G+D A+K+ R+R E ++L V H ++K+
Sbjct: 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV--RTKMERDILVEVNHPFIVKLH 92
Query: 396 SSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
+ T F+ G L RL F + + + ++ L++LH S I
Sbjct: 93 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH----SLGI 147
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISK 477
I+ DLKP +ILLDE ++DFG+SK
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 137 IKPENLLLGSAGELKIADFGWS 158
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 344 GSFGSVYKGTISDGTDV--AIKIFNLQRERAFRSFNSECEVL-RNVRHQNLIKILSSCST 400
GS+ SV K I T++ A+KI + ++ R E E+L R +H N+I +
Sbjct: 33 GSY-SVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 401 PDFKF-----MPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
+ + M G L ++ +F + E ++ + T+EYLH + ++H DL
Sbjct: 88 GKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH----AQGVVHRDL 142
Query: 456 KPTSIL-LDEN---MVAHVSDFGISKLL 479
KP++IL +DE+ + DFG +K L
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++MP G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK 189
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++MP G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK 189
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 139 IKPENLLLGSAGELKIADFGWS 160
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L YS+N + E+L+
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 159 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 137 IKPENLLLGSAGELKIADFGWS 158
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L YS+N + E+L+
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 159 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 137 IKPENLLLGSAGELKIADFGWS 158
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV + G +A+K + + +R +R E +L++++H+N+I +L
Sbjct: 61 SGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 116
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 117 DV-------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 169
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 170 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 139 IKPENLLLGSAGELKIADFGWS 160
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKGTI-SDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GS G V T+ S G VA+K +L++++ +E ++R+ +H+N++++ +S D
Sbjct: 162 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD 221
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+F+ G+L + +H ++ + + + V L LH + +IH D+K
Sbjct: 222 ELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKS 275
Query: 458 TSILLDENMVAHVSDFG 474
SILL + +SDFG
Sbjct: 276 DSILLTHDGRVKLSDFG 292
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 20/148 (13%)
Query: 343 AGSFGSVY--KGTISDGTDVAIKIFNLQRERAFR--SFNSECEVLRNVRHQNLIKI--LS 396
+G+F V+ K ++ G A+K +++ AFR S +E VL+ ++H+N++ + +
Sbjct: 19 SGAFSEVFLVKQRLT-GKLFALKC--IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 397 SCSTPDF---KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+T + + + G L R+ + + L ++ V S ++YLH I+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYLHEN----GIVHR 130
Query: 454 DLKPTSILL---DENMVAHVSDFGISKL 478
DLKP ++L +EN ++DFG+SK+
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 139 IKPENLLLGSAGELKIADFGWS 160
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 344 GSFGSVYKGTISDGTD--VAIKIFNLQRER-AFRSFNSECEVLRNVRHQNLIKILSSCST 400
G++ +VYKG S TD VA+K L+ E A + E +L++++H N++ + T
Sbjct: 13 GTYATVYKGK-SKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT 71
Query: 401 PDFKFMPNGSLEKRLYSHNYFLD----ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+ L+K L +LD I+ N+ + + L L + H ++H DLK
Sbjct: 72 EKSLTLVFEYLDKDL---KQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLK 127
Query: 457 PTSILLDENMVAHVSDFGISK 477
P ++L++E ++DFG+++
Sbjct: 128 PQNLLINERGELKLADFGLAR 148
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 135
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 136 IKPENLLLGSAGELKIADFGWS 157
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 43 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 98
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 99 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 152 IH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 32 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 91
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L YS+N + E+L+
Sbjct: 92 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 151
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 152 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 31 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 90
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L YS+N + E+L+
Sbjct: 91 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 150
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 151 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIT 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 28 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 87
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L YS+N + E+L+
Sbjct: 88 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 147
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 148 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 36/163 (22%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQ-----RERAFRSFNSECEVLRNVRHQNLIKILSS 397
G FG V + D G VAIK + RER + E ++++ + H N++ S+
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER----WCLEIQIMKKLNHPNVV---SA 77
Query: 398 CSTPD--FKFMPN------------GSLEKRLYSHNYFLDILER--LNIMIDVGSTLEYL 441
PD K PN G L K L + E ++ D+ S L YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 442 HHGHSSAPIIHCDLKPTSILLD---ENMVAHVSDFGISKLLGE 481
H IIH DLKP +I+L + ++ + D G +K L +
Sbjct: 138 HENR----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIH 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 134 IKPENLLLGSAGELKIADFGWS 155
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 55 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 110
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 111 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 164 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 51 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 106
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 107 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 160 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 75
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 76 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 130
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 131 IKPENLLLGSAGELKIADFGWS 152
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFN---LQRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSF VY+ +I G +VAIK+ + + + + +E ++ ++H +++++ +
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81
Query: 400 TPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH-HGHSSAPIIHC 453
++ ++ NG + + L + E + M + + + YLH HG I+H
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG-----ILHR 136
Query: 454 DLKPTSILLDENMVAHVSDFGISKLL 479
DL +++LL NM ++DFG++ L
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 39 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 94
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 95 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 148 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 36/163 (22%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQ-----RERAFRSFNSECEVLRNVRHQNLIKILSS 397
G FG V + D G VAIK + RER + E ++++ + H N++ S+
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER----WCLEIQIMKKLNHPNVV---SA 78
Query: 398 CSTPD--FKFMPN------------GSLEKRLYSHNYFLDILER--LNIMIDVGSTLEYL 441
PD K PN G L K L + E ++ D+ S L YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 442 HHGHSSAPIIHCDLKPTSILLD---ENMVAHVSDFGISKLLGE 481
H IIH DLKP +I+L + ++ + D G +K L +
Sbjct: 139 HENR----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 134
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 135 IKPENLLLGSAGELKIADFGWS 156
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 134
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 135 IKPENLLLGSAGELKIADFGWS 156
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 52 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 107
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 108 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 161 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 39 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 94
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 95 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 148 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 52 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 107
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 108 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 161 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 34 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 89
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 90 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 143 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 52 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 107
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 108 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 161 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 30 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 85
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 86 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 139 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 51 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 106
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 107 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 160 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 34 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 89
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 90 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 143 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH----SLDLIYRD 167
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 37 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 92
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 93 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 146 IH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 39 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 94
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 95 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 148 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 27/120 (22%)
Query: 362 IKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYF 421
I IFN+QR +F +FN E +++ + +L +++S+
Sbjct: 72 ITIFNIQRPDSFENFN-EVYIIQELMQTDLHRVIST------------------------ 106
Query: 422 LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+L +I + TL + H S +IH DLKP+++L++ N V DFG+++++ E
Sbjct: 107 -QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 43 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 98
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 99 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 152 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 28 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 83
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 84 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 137 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 28 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 83
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 84 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 137 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 29 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 84
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 85 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 138 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 44 SGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 99
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 100 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 153 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 27/120 (22%)
Query: 362 IKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYF 421
I IFN+QR +F +FN E +++ + +L +++S+
Sbjct: 72 ITIFNIQRPDSFENFN-EVYIIQELMQTDLHRVIST------------------------ 106
Query: 422 LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+L +I + TL + H S +IH DLKP+++L++ N V DFG+++++ E
Sbjct: 107 -QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 44 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 99
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 100 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 153 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 44 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 99
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 100 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 153 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 37 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 92
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 93 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 146 IH----SADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 29 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 84
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 85 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 138 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 37 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 92
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 93 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 146 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 28 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 83
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 84 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 137 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 39 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 94
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 95 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 148 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 27/120 (22%)
Query: 362 IKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYF 421
I IFN+QR +F +FN E +++ + +L +++S+
Sbjct: 72 ITIFNIQRPDSFENFN-EVYIIQELMQTDLHRVIST------------------------ 106
Query: 422 LDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+L +I + TL + H S +IH DLKP+++L++ N V DFG+++++ E
Sbjct: 107 -QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 38 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 93
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 94 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 147 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 55 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 110
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 111 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 164 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 34 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 89
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 90 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 143 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 22/165 (13%)
Query: 324 SGDIPSTIGALVDLETISLAGSFGSVYKGT-ISDGTDVAIKIFNLQR------ERAFRSF 376
S D IG L+TI G+F V I G +VA+KI + + ++ FR
Sbjct: 6 SADEQPHIGNYRLLKTIG-KGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-- 62
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
E + + + H N++K+ T ++ G + L +H + R
Sbjct: 63 --EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR 120
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ S ++Y H I+H DLK ++LLD + ++DFG S
Sbjct: 121 -QIVSAVQYCHQKF----IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 335 VDLETISLAGS--FGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNL 391
+D + I L GS FG V+K DG IK E+A R E + L + H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNI 66
Query: 392 I---------------------KILSSCSTPDFKFMPNGSLEKRLYSHN-YFLDILERLN 429
+ + + C +F G+LE+ + LD + L
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGI 475
+ + ++Y+H S +I+ DLKP++I L + + DFG+
Sbjct: 127 LFEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 37 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 92
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 93 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 146 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 31 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 86
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 87 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 140 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 45 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH----SLDLI 156
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYK-GTISDGTDVAIKIFNL--QRERAFRSFNSECEVL 383
+PS L TI GS+G K SDG + K + E + SE +L
Sbjct: 1 MPSRAEDYEVLYTIG-TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 384 RNVRHQNLIK---------------ILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERL 428
R ++H N+++ ++ C D + ++R Y F+ L
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-----L 114
Query: 429 NIMIDVGSTLEYLHH----GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+M + L+ H GH+ ++H DLKP ++ LD + DFG++++L
Sbjct: 115 RVMTQLTLALKECHRRSDGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 38 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 93
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 94 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 147 IH----SADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYK-GTISDGTDVAIKIFNL--QRERAFRSFNSECEVL 383
+PS L TI GS+G K SDG + K + E + SE +L
Sbjct: 1 MPSRAEDYEVLYTIG-TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 384 RNVRHQNLIK---------------ILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERL 428
R ++H N+++ ++ C D + ++R Y F+ L
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-----L 114
Query: 429 NIMIDVGSTLEYLHH----GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+M + L+ H GH+ ++H DLKP ++ LD + DFG++++L
Sbjct: 115 RVMTQLTLALKECHRRSDGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 34 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 89
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 90 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 143 IH----SADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 92 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 151
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 152 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 211
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 212 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 5 IPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNI 64
+P I NLQNLKSL + + LS L P I ++ + L+L G + P + G P +
Sbjct: 198 LPASIANLQNLKSLKIRNSPLSALG-PAIHHLPKLEELDLRGCTALRNYPPIFGGRAP-L 255
Query: 65 KYLELGDNNLIGTIPNSITNATKLIILDL 93
K L L D + + T+P I T+L LDL
Sbjct: 256 KRLILKDCSNLLTLPLDIHRLTQLEKLDL 284
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ + G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 42 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 97
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 98 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 151 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 38 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 93
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 94 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 147 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 52 GSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 163
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 38 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 93
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 94 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 147 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 52 GSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 163
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 73 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 184
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 35 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 94
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 95 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 154
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 155 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 48/171 (28%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 394 ILSSCSTP---------------------------DFKFMPNGSLEKRLYSHNYFLDILE 426
+L +C+ +F F P+ + E++L S +
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL------ 152
Query: 427 RLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 153 -VSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 336 DLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNV-------R 387
+LE I +G FGSV+K DG AIK + ++ E LR V +
Sbjct: 15 ELEKIG-SGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 388 HQNLIKILSSCSTPDFKFMPN-----GSLEKRLYSHNY----FLDILERLNIMIDVGSTL 438
H ++++ S+ + D + N GSL + S NY + E ++++ VG L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 439 EYLHHGHSSAPIIHCDLKPTSILL 462
Y+H S ++H D+KP++I +
Sbjct: 129 RYIH----SMSLVHMDIKPSNIFI 148
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 52 GSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 163
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYK-GTISDGTDVAIKIFNL--QRERAFRSFNSECEVL 383
+PS L TI GS+G K SDG + K + E + SE +L
Sbjct: 1 MPSRAEDYEVLYTIG-TGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 384 RNVRHQNLIK---------------ILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERL 428
R ++H N+++ ++ C D + ++R Y F+ L
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-----L 114
Query: 429 NIMIDVGSTLEYLHH----GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+M + L+ H GH+ ++H DLKP ++ LD + DFG++++L
Sbjct: 115 RVMTQLTLALKECHRRSDGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 38 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 97
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 98 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 157
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 158 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 338 ETISLAGSFGS----VYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVL-RNVRHQNLI 392
ETI + GS+ V+K T + A+K+ + ++ R + E E+L R +H N+I
Sbjct: 33 ETIGV-GSYSECKRCVHKAT---NMEYAVKVID----KSKRDPSEEIEILLRYGQHPNII 84
Query: 393 KILSSCSTPDF-----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSS 447
+ + M G L ++ +F + E ++ +G T+EYLH S
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE-REASFVLHTIGKTVEYLH----S 139
Query: 448 APIIHCDLKPTSIL-LDEN---MVAHVSDFGISKLL 479
++H DLKP++IL +DE+ + DFG +K L
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 336 DLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNV-------R 387
+LE I +G FGSV+K DG AIK + ++ E LR V +
Sbjct: 13 ELEKIG-SGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 388 HQNLIKILSSCSTPDFKFMPN-----GSLEKRLYSHNY----FLDILERLNIMIDVGSTL 438
H ++++ S+ + D + N GSL + S NY + E ++++ VG L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 439 EYLHHGHSSAPIIHCDLKPTSILL 462
Y+H S ++H D+KP++I +
Sbjct: 127 RYIH----SMSLVHMDIKPSNIFI 146
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 336 DLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNV-------R 387
+LE I +G FGSV+K DG AIK + ++ E LR V +
Sbjct: 11 ELEKIG-SGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 388 HQNLIKILSSCSTPDFKFMPN-----GSLEKRLYSHNY----FLDILERLNIMIDVGSTL 438
H ++++ S+ + D + N GSL + S NY + E ++++ VG L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 439 EYLHHGHSSAPIIHCDLKPTSILL 462
Y+H S ++H D+KP++I +
Sbjct: 125 RYIH----SMSLVHMDIKPSNIFI 144
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 344 GSFGSVY---KGTISD-GTDVAIKIFNLQ----RERAFRSFNSECEVLRNVRHQNLIKIL 395
GSFG V+ K T D G A+K+ R+R E ++L +V H ++K+
Sbjct: 39 GSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV--RTKMERDILADVNHPFVVKLH 96
Query: 396 SSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
+ T F+ G L RL F + + + ++ L++LH S I
Sbjct: 97 YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALGLDHLH----SLGI 151
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISK 477
I+ DLKP +ILLDE ++DFG+SK
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 19/147 (12%)
Query: 14 NLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNN 73
N + L+L N ++ L P + ++ ++ L LG N+L G LP + SL + L+LG N
Sbjct: 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQ 99
Query: 74 LIGTIPNSITNATKLIILDLGFNTFSG--HIPNTFGNLRHLSVLSLLMNNLTTESSSAYQ 131
L +P+++ + +L+ L F + +P L HL+ L+L N L + A+
Sbjct: 100 LT-VLPSAVFD--RLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156
Query: 132 WSFLSSLTN-----------CRYLVYL 147
LSSLT+ CR ++YL
Sbjct: 157 --RLSSLTHAYLFGNPWDCECRDIMYL 181
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 261 SLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSR 320
SLT L LDLG+N+LT +PS+++ L+ +++L L L L +
Sbjct: 86 SLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQ 144
Query: 321 NQLSGDIPSTIGALVDLETISLAGSFGSVYKGTISD 356
NQL IP GA L +++ A FG+ + D
Sbjct: 145 NQLKS-IPH--GAFDRLSSLTHAYLFGNPWDCECRD 177
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 53 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 164
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 167
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 167
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 53 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 164
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
G+F V + + G + A KI N ++ R + E + R ++H N++++ S S
Sbjct: 15 GAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISE 74
Query: 401 PDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
F ++ G L + + + Y+ + + + LE + H H ++H DL
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAVLHCHQMG-VVHRDL 129
Query: 456 KPTSILLD---ENMVAHVSDFGIS 476
KP ++LL + ++DFG++
Sbjct: 130 KPENLLLASKCKGAAVKLADFGLA 153
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 152
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAK 175
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 33 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 92
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ ++ G+L + L + Y DI E++ V T
Sbjct: 93 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 152
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 153 LARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 53 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 164
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 336 DLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNV-------R 387
+LE I +G FGSV+K DG AIK + ++ E LR V +
Sbjct: 13 ELEKIG-SGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 388 HQNLIKILSSCSTPDFKFMPN-----GSLEKRLYSHNY----FLDILERLNIMIDVGSTL 438
H ++++ S+ + D + N GSL + S NY + E ++++ VG L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 439 EYLHHGHSSAPIIHCDLKPTSILL 462
Y+H S ++H D+KP++I +
Sbjct: 127 RYIH----SMSLVHMDIKPSNIFI 146
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-----NYFLDI----LERLNIMIDVGST-- 437
+L +C+ + G+L + L + Y DI E++ V T
Sbjct: 106 LLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 438 ----LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+EYL +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 338 ETISLAGSFGS----VYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVL-RNVRHQNLI 392
ETI + GS+ V+K T + A+K+ + ++ R + E E+L R +H N+I
Sbjct: 33 ETIGV-GSYSECKRCVHKAT---NMEYAVKVID----KSKRDPSEEIEILLRYGQHPNII 84
Query: 393 KILSSCSTPDF-----KFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSS 447
+ + M G L ++ +F + E ++ +G T+EYLH S
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE-REASFVLHTIGKTVEYLH----S 139
Query: 448 APIIHCDLKPTSIL-LDEN---MVAHVSDFGISKLL 479
++H DLKP++IL +DE+ + DFG +K L
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 344 GSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G+ G+VY ++ G +VAI+ NLQ++ +E V+R ++ N++ L S D
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD 91
Query: 403 -----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
+++ GSL + +D + + + LE+LH S +IH ++K
Sbjct: 92 ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRNIKS 145
Query: 458 TSILLDENMVAHVSDFG 474
+ILL + ++DFG
Sbjct: 146 DNILLGMDGSVKLTDFG 162
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 45 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S +++P G + L F + R + T EYLH S +I
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 156
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++L+D+ V+DFG +K
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 29/169 (17%)
Query: 327 IPSTIGALVDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV 386
+ TI + + G +G V+ G G VA+K+F E S+ E E+ + V
Sbjct: 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEA---SWFRETEIYQTV 86
Query: 387 --RHQNLIKILSSCSTPDFK-------------FMPNGSLEKRLYSHNYFLDILERLNIM 431
RH+N++ +++ D K + NGSL L S LD L +
Sbjct: 87 LMRHENILGFIAA----DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLA 140
Query: 432 IDVGSTLEYLH----HGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S L +LH I H DLK +IL+ +N ++D G++
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 28 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 83
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI----------LERLNIMI-DVGSTLEY 440
F P SLE+ L +H D+ + + +I + L+Y
Sbjct: 84 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+++
Sbjct: 137 IH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 11/154 (7%)
Query: 7 TEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKY 66
+ + L NL L L N L L + ++ ++ L L N+L LP + L N+ Y
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTY 137
Query: 67 LELGDNNLIGTIPNSITNA-TKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE 125
L L N L ++P + + T L LDL +N F L L L L N L +
Sbjct: 138 LNLAHNQL-QSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196
Query: 126 SSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILP 159
+ L+SL Y+ L NP P
Sbjct: 197 PDGVF--DRLTSLQ------YIWLHDNPWDCTCP 222
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 65/163 (39%), Gaps = 13/163 (7%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPN-TFGNLRHLSVLSLLM 119
LPN++YL LG N L +++ T L L L N +PN F L +L L L+
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVE 118
Query: 120 NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKL 179
N L + + LTN L YL L+ N L LP + + T+L S +L
Sbjct: 119 NQLQSLPDGVF-----DKLTN---LTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQL 169
Query: 180 KGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFL 222
+ L L L L N L L LQ +L
Sbjct: 170 QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNS--ECEVLRNVRHQNLIKILSSCST 400
G+FG V+K G VA+K ++ E+ + E ++L+ ++H+N++ ++ C T
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 401 PDFKFMPNGSLEKRLY------SHN-----------YFLDILERLNIMIDVGSTLEYLHH 443
K P + +Y H+ + L ++R+ M+ G L Y+H
Sbjct: 89 ---KASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG--LYYIHR 143
Query: 444 GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
I+H D+K ++L+ + V ++DFG+++
Sbjct: 144 NK----ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 100/247 (40%), Gaps = 40/247 (16%)
Query: 5 IPTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGN--------RLSGHLPSM 56
+P+ I + +LK L L AN+ L + ++R+L + GN R L ++
Sbjct: 292 LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENL 351
Query: 57 ----IGHS--------------LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTF 98
+ HS L +++YL L N +G + +L +LD+ F
Sbjct: 352 QKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHL 411
Query: 99 SGHIPNT-FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPL--G 155
P++ F NL L VL+L L T + L+ L + R+L L GN G
Sbjct: 412 HVKAPHSPFQNLHLLRVLNLSHCLLDTSNQ-----HLLAGLQDLRHLN---LQGNSFQDG 463
Query: 156 GILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLK 215
I ++ SL+ S C L + LR + +L L N L G S+ L
Sbjct: 464 SISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTG---DSMDALS 520
Query: 216 QLQGFFL 222
L+G +L
Sbjct: 521 HLKGLYL 527
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + D+G+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+++P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++L+D+ V+DFG +K
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK 189
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 27/165 (16%)
Query: 334 LVDLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ 389
L D E I G FG V++ D + AIK L RE A E + L + H
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 390 NLIKILSSC-----------STPDFKFMPNGSLEKRLYSHNYF---LDILER-----LNI 430
+++ ++ S+P L ++ ++ I ER L+I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 431 MIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGI 475
+ + +E+LH S ++H DLKP++I + V V DFG+
Sbjct: 124 FLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L Y +N + E+L+
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 159 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 332 GALVDLETISLA-----GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSE 379
G LVD+E G++G VYK G VA+K L E A R E
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----E 56
Query: 380 CEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTL 438
+L+ + H N++K+L T + ++ L + L F+D I + + S L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYL 113
Query: 439 EYLHHGHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
L G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 27/139 (19%)
Query: 360 VAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSH 418
VAIK NL++ + + E + + H N++ +S D + L +L S
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-----LVMKLLSG 92
Query: 419 NYFLDILERL-----------------NIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL 461
LDI++ + I+ +V LEYLH IH D+K +IL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ----IHRDVKAGNIL 148
Query: 462 LDENMVAHVSDFGISKLLG 480
L E+ ++DFG+S L
Sbjct: 149 LGEDGSVQIADFGVSAFLA 167
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 335 VDLETISLAGSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIK 393
+DL+ + G+ G V+ +D VAIK L ++ + E +++R + H N++K
Sbjct: 14 MDLKPLGCGGN-GLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 394 ILSSCSTPDFKFMPN-GSLEK-------RLYSHNYFLDILE---------RLNIMIDVGS 436
+ + + GSL + + Y ++LE RL M +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLR 131
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLD-ENMVAHVSDFGISKLL 479
L+Y+H SA ++H DLKP ++ ++ E++V + DFG+++++
Sbjct: 132 GLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 344 GSFGSVYKGTISDGT--DVAIKIFNLQRERAFRSFNSECEVL-RNVRHQNLIKILSSCST 400
GS+ SV K I T + A+KI + ++ R E E+L R +H N+I +
Sbjct: 33 GSY-SVCKRCIHKATNXEFAVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 401 PDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
+ ++ G L ++ +F + E ++ + T+EYLH + ++H DL
Sbjct: 88 GKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH----AQGVVHRDL 142
Query: 456 KPTSIL-LDEN---MVAHVSDFGISKLL 479
KP++IL +DE+ + DFG +K L
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG++K
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAK 189
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIFNLQR-ERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + T VA+K+ E+ SE E+++ + +H+N+I
Sbjct: 24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 83
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRL---------YSHNYFLDILERLN------IMID 433
+L +C+ ++ G+L + L Y +N + E+L+
Sbjct: 84 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQ 143
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +EYL +S IH DL ++L+ E+ V ++DFG+++
Sbjct: 144 VARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 378 SECEVLRNVR-HQNLIKILSSCSTPDFKF-----MPNGSLEKRLYSHNYFLDILERLNIM 431
E ++LR V H N+I++ + T F F M G L L + L E IM
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 117
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + LH I+H DLKP +ILLD++M ++DFG S
Sbjct: 118 RALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 349 VYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNV-RHQNLIKILSSCSTPDFKFMP 407
VY+G D DVA+K + F + E ++LR H N+I+ + F+++
Sbjct: 41 VYRGMF-DNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96
Query: 408 ----NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD 463
+L++ + ++ LE + ++ S L +LH S I+H DLKP +IL+
Sbjct: 97 IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH----SLNIVHRDLKPHNILIS 152
Query: 464 E-----NMVAHVSDFGISKLLG 480
+ A +SDFG+ K L
Sbjct: 153 MPNAHGKIKAMISDFGLCKKLA 174
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL +++FG S
Sbjct: 137 IKPENLLLGSAGELKIANFGWS 158
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 344 GSFGSVYKGTISDGTD--VAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
GSFG V+KG I + T VAIKI +L+ Q I +LS C +P
Sbjct: 18 GSFGEVFKG-IDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEITVLSQCDSP 65
Query: 402 DF-KFMPNGSLEKRLYSHNYFL------DILER--------LNIMIDVGSTLEYLHHGHS 446
K+ + + +L+ +L D+LE I+ ++ L+YLH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---- 121
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S IH D+K ++LL E+ ++DFG++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 45/165 (27%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIK 393
+G++GSV Y + VA+K + + R +R E +L++++H+N+I
Sbjct: 30 SGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIG 83
Query: 394 ILSSCSTPDFKFMPNGSLEKRLYSHNYFLDIL----------------ERLNIMI-DVGS 436
+L F P S+E +S Y + L E + ++ +
Sbjct: 84 LLDV-------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+Y+H SA IIH DLKP+++ ++E+ + DFG+++ E
Sbjct: 135 GLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE 175
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 34/160 (21%)
Query: 334 LVDLETISLAGSFGSVYKGTISDGTD--VAIKIFNLQRERAFRSFNSECEVLRNVRHQNL 391
LE I GSFG V+KG I + T VAIKI +L+ Q
Sbjct: 9 FTKLEKIG-KGSFGEVFKG-IDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQE 55
Query: 392 IKILSSCSTPDF-KFMPNGSLEKRLYSHNYFL------DILER--------LNIMIDVGS 436
I +LS C +P K+ + + +L+ +L D+LE I+ ++
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 115
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
L+YLH S IH D+K ++LL E+ ++DFG++
Sbjct: 116 GLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 45/165 (27%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIK 393
+G++GSV Y + VA+K + + R +R E +L++++H+N+I
Sbjct: 38 SGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIG 91
Query: 394 ILSSCSTPDFKFMPNGSLEKRLYSHNYFLDIL----------------ERLNIMI-DVGS 436
+L F P S+E +S Y + L E + ++ +
Sbjct: 92 LLDV-------FTPATSIED--FSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+Y+H SA IIH DLKP+++ ++E+ + DFG+++ E
Sbjct: 143 GLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE 183
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 344 GSFGSVY--------KGTISDGTDVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIK 393
G+FG V K + VA+K+ + E+ SE E+++ + +H+N+I
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSH-------NYFLD-ILERLNIMIDVGSTLEY 440
+L +C+ ++ G+L + L + +Y ++ + E D+ S
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 441 LHHGH---SSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
L G +S IH DL ++L+ EN V ++DFG+++
Sbjct: 166 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 344 GSFGSVYKGTISDGTD--VAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
GSFG V+KG I + T VAIKI +L+ Q I +LS C +P
Sbjct: 38 GSFGEVFKG-IDNRTQKVVAIKIIDLEEAED-----------EIEDIQQEITVLSQCDSP 85
Query: 402 DF-KFMPNGSLEKRLYSHNYFL------DILER--------LNIMIDVGSTLEYLHHGHS 446
K+ + + +L+ +L D+LE I+ ++ L+YLH
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---- 141
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S IH D+K ++LL E+ ++DFG++
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNS--ECEVLRNVRHQNLIKILSSCST 400
G+FG V+K G VA+K ++ E+ + E ++L+ ++H+N++ ++ C T
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 401 PDFKFMPNGSLEKRLY------SHN-----------YFLDILERLNIMIDVGSTLEYLHH 443
K P + +Y H+ + L ++R+ M+ G L Y+H
Sbjct: 89 ---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG--LYYIHR 143
Query: 444 GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
I+H D+K ++L+ + V ++DFG+++
Sbjct: 144 NK----ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DFG+ +
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 27/139 (19%)
Query: 360 VAIKIFNLQR-ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSH 418
VAIK NL++ + + E + + H N++ +S D + L +L S
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-----LVMKLLSG 97
Query: 419 NYFLDILERL-----------------NIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL 461
LDI++ + I+ +V LEYLH IH D+K +IL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ----IHRDVKAGNIL 153
Query: 462 LDENMVAHVSDFGISKLLG 480
L E+ ++DFG+S L
Sbjct: 154 LGEDGSVQIADFGVSAFLA 172
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+DE V+DFG +K
Sbjct: 140 TFEYLH----SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG +K
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 5 IPTE-IGNLQNLKSLFLGANNLSGLIPPMIFN-ISTIRNLNLGGNRLSGHLPSMIGHSLP 62
+PT+ L L+ L+L N + IP FN + ++R L+LG + ++ L
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLV 156
Query: 63 NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNL 122
N++YL LG NL IPN +T +L L+L N P +F L L L L+ +
Sbjct: 157 NLRYLNLGMCNL-KDIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
Query: 123 TTESSSAY 130
T +A+
Sbjct: 215 ATIERNAF 222
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 94/265 (35%), Gaps = 59/265 (22%)
Query: 60 SLP-NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118
S+P N +YL L +N++ ++ + L IL L N F L L+ L L
Sbjct: 32 SIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 91
Query: 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECK 178
N LTT + A++ +LS L L L NP+ I P N SL+R
Sbjct: 92 DNRLTTVPTQAFE--YLSKLRE------LWLRNNPIESI-PSYAFNRVPSLRRL------ 136
Query: 179 LKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXXXXX 238
++G L+ L Y+S + L L+ L NL+
Sbjct: 137 -------DLGELKRLEYIS----------EAAFEGLVNLRYLNLGMCNLKDI-------- 171
Query: 239 XXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXX 298
P L +L L EL+L N+L P S L + ++
Sbjct: 172 ------------------PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 213
Query: 299 XXXXXXXXVQKLKVLRVLDLSRNQL 323
LK L L+LS N L
Sbjct: 214 VATIERNAFDDLKSLEELNLSHNNL 238
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 43/173 (24%)
Query: 75 IGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSV-------------------- 114
+ +P SI T+ L+L N+ +TF +LRHL +
Sbjct: 26 LAEVPASIPVNTR--YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLP 83
Query: 115 ----LSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQ 170
L L N LTT + A++ +LS L L L NP+ I P N SL+
Sbjct: 84 SLNTLELFDNRLTTVPTQAFE--YLSKLRE------LWLRNNPIESI-PSYAFNRVPSLR 134
Query: 171 RFSASECKLKGTIPKEIGHLRGLI---YLSLGFNDLNGTIP--TSIGTLKQLQ 218
R E K I + GL+ YL+LG +L IP T++ L++L+
Sbjct: 135 RLDLGELKRLEYISE--AAFEGLVNLRYLNLGMCNLKD-IPNLTALVRLEELE 184
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGTDV-AIKI-FNLQRERA--FRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY + A+K+ F Q E+A E E+ ++RH N++++
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G++ + L + F D + ++ + L Y H S +IH D
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYCH----SKRVIHRD 135
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL +++FG S
Sbjct: 136 IKPENLLLGSAGELKIANFGWS 157
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 378 SECEVLRNVR-HQNLIKILSSCSTPDFKF-----MPNGSLEKRLYSHNYFLDILERLNIM 431
E ++LR V H N+I++ + T F F M G L L + L E IM
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + LH I+H DLKP +ILLD++M ++DFG S
Sbjct: 131 RALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
G+F V + + G + A KI N ++ R + E + R ++H N++++ S S
Sbjct: 33 GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 92
Query: 401 PD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
F + G L + + + Y+ + + + LE + H H ++H DL
Sbjct: 93 EGHHYLIFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAVLHCHQMG-VVHRDL 147
Query: 456 KPTSILLDENM---VAHVSDFGIS 476
KP ++LL + ++DFG++
Sbjct: 148 KPENLLLASKLKGAAVKLADFGLA 171
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 33/150 (22%)
Query: 344 GSFGSVYKGTISDGTD--VAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
GSFG V+KG I + T VAIKI +L+ Q I +LS C +P
Sbjct: 33 GSFGEVFKG-IDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEITVLSQCDSP 80
Query: 402 DF-KFMPNGSLEKRLYSHNYFL------DILER--------LNIMIDVGSTLEYLHHGHS 446
K+ + + +L+ +L D+LE I+ ++ L+YLH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---- 136
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S IH D+K ++LL E+ ++DFG++
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 378 SECEVLRNVR-HQNLIKILSSCSTPDFKF-----MPNGSLEKRLYSHNYFLDILERLNIM 431
E ++LR V H N+I++ + T F F M G L L + L E IM
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + LH I+H DLKP +ILLD++M ++DFG S
Sbjct: 131 RALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 45/165 (27%)
Query: 343 AGSFGSV---YKGTISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIK 393
+G++GSV Y + VA+K + + R +R E +L++++H+N+I
Sbjct: 38 SGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIG 91
Query: 394 ILSSCSTPDFKFMPNGSLEKRLYSHNYFLDIL----------------ERLNIMI-DVGS 436
+L F P S+E +S Y + L E + ++ +
Sbjct: 92 LLDV-------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+Y+H SA IIH DLKP+++ ++E+ + DFG+++ E
Sbjct: 143 GLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE 183
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNS--ECEVLRNVRHQNLIKILSSCST 400
G+FG V+K G VA+K ++ E+ + E ++L+ ++H+N++ ++ C T
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 401 PDFKFMPNGSLEKRLY------SHN-----------YFLDILERLNIMIDVGSTLEYLHH 443
K P + +Y H+ + L ++R+ M+ G L Y+H
Sbjct: 89 ---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG--LYYIHR 143
Query: 444 GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
I+H D+K ++L+ + V ++DFG+++
Sbjct: 144 NK----ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNS--ECEVLRNVRHQNLIKILSSCST 400
G+FG V+K G VA+K ++ E+ + E ++L+ ++H+N++ ++ C T
Sbjct: 28 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 87
Query: 401 PDFKFMPNGSLEKRLY------SHN-----------YFLDILERLNIMIDVGSTLEYLHH 443
K P + +Y H+ + L ++R+ M+ G L Y+H
Sbjct: 88 ---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG--LYYIHR 142
Query: 444 GHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
I+H D+K ++L+ + V ++DFG+++
Sbjct: 143 NK----ILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG +K
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAK 189
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG++K
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVR----------HQNL 391
G++G V+K G VA+K + F +F + + R R H+N+
Sbjct: 19 KGAYGIVWKSIDRRTGEVVAVK-------KIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 392 IKILSSCSTPDFK--FMPNGSLEKRLYS--HNYFLDILERLNIMIDVGSTLEYLHHGHSS 447
+ +L+ + + ++ +E L++ L+ + + ++ + ++YLH G
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG--- 128
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISK 477
++H D+KP++ILL+ V+DFG+S+
Sbjct: 129 -GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 37/168 (22%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERA----FRSFNSECEVLRNVRHQNLIK 393
G FG V K T + T VA+K+ +E A R SE VL+ V H ++IK
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVKML---KENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 394 ILSSCSTPD-----FKFMPNGSL-----EKRLYSHNYFLDIL-----------ERLNIMI 432
+ +CS ++ GSL E R Y ER M
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 433 DVGSTLEYLHHGH---SSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
D+ S + G + ++H DL +IL+ E +SDFG+S+
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 37/168 (22%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERA----FRSFNSECEVLRNVRHQNLIK 393
G FG V K T + T VA+K+ +E A R SE VL+ V H ++IK
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVKML---KENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 394 ILSSCSTPD-----FKFMPNGSL-----EKRLYSHNYFLDIL-----------ERLNIMI 432
+ +CS ++ GSL E R Y ER M
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 433 DVGSTLEYLHHGH---SSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
D+ S + G + ++H DL +IL+ E +SDFG+S+
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
G+F V + T + A KI N ++ R + E + R ++H N++++ S S
Sbjct: 42 GAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 101
Query: 401 PDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
F ++ G L + + + Y+ + + + LE ++H H I+H DL
Sbjct: 102 EGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIHQILESVNHIHQH-DIVHRDL 156
Query: 456 KPTSILLD---ENMVAHVSDFGIS 476
KP ++LL + ++DFG++
Sbjct: 157 KPENLLLASKCKGAAVKLADFGLA 180
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 344 GSFGSVYKGTISDGTDV-AIKIFN-LQRERAFRSFNSECEVLRNVRHQNLIKILS--SCS 399
G+ +V++G D+ AIK+FN + R E EVL+ + H+N++K+ + +
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET 79
Query: 400 TPDFK-----FMPNGSLEKRLY--SHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
T K F P GSL L S+ Y L E L ++ DV + +L I+H
Sbjct: 80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN----GIVH 135
Query: 453 CDLKPTSILL----DENMVAHVSDFGISKLL 479
++KP +I+ D V ++DFG ++ L
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 14/142 (9%)
Query: 344 GSFGSVYKGTISDGT-DVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
G FG+VY VA+K+ +++E E E+ ++ H N++++ +
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFY 93
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G L K L F D IM ++ L Y H +IH D
Sbjct: 94 DRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCH----GKKVIHRD 148
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
+KP ++LL ++DFG S
Sbjct: 149 IKPENLLLGLKGELKIADFGWS 170
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 1/119 (0%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L+ L+L N L L + + + L + N+L LP + L N+ L L
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDR 118
Query: 72 NNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAY 130
N L P + TKL L LG+N F L L L L N L A+
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 76/189 (40%), Gaps = 12/189 (6%)
Query: 37 STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATK-LIILDLGF 95
+ + L+L N+LS LPS H L ++ L L DN L T+P I K L L +
Sbjct: 37 ADTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTD 94
Query: 96 NTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLG 155
N F L +L+ L L N L + + SLT L YL L N L
Sbjct: 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVF-----DSLTK---LTYLSLGYNELQ 146
Query: 156 GILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLK 215
LP + + TSL+ +LK L L L L N L + +L+
Sbjct: 147 S-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLE 205
Query: 216 QLQGFFLPE 224
+L+ L E
Sbjct: 206 KLKMLQLQE 214
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Query: 75 IGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSF 134
+ IP++I TK LDL N S F L L +L L N L T + ++
Sbjct: 28 LTAIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK--- 82
Query: 135 LSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLI 194
L N L L ++ N L LP + + +L +LK P+ L L
Sbjct: 83 --ELKN---LETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLT 136
Query: 195 YLSLGFNDLNGTIPTSI 211
YLSLG+N+L ++P +
Sbjct: 137 YLSLGYNELQ-SLPKGV 152
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L+K+ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 166
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG +K
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 152/421 (36%), Gaps = 46/421 (10%)
Query: 37 STIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFN 96
+ R L+LG NR+ L S P+++ LEL +N + P + N L L L N
Sbjct: 32 TETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90
Query: 97 TFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQ--WSFLSSLTNCRYLVYLILSGNPL 154
F L +L+ L + N + +Q ++ S LVY +S
Sbjct: 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY--ISHRAF 148
Query: 155 GGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTL 214
G+ SL++ + +C L + + HL GLI L L ++N S L
Sbjct: 149 SGL---------NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRL 199
Query: 215 KQLQGFFLPETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNK 274
+L+ + + L+ + L LR L+L N
Sbjct: 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 275 LTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIPSTIGAL 334
+++ S L L + EI + L LRVL++S NQL+ S ++
Sbjct: 260 ISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319
Query: 335 VDLETISLAGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKI 394
+LET+ L S+ ++ + R R +FN R Q
Sbjct: 320 GNLETLILD-----------SNPLACDCRLLWVFRRRWRLNFN---------RQQ----- 354
Query: 395 LSSCSTP------DFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSA 448
+C+TP +FK P+ L + + + +D G T++++
Sbjct: 355 -PTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDP 413
Query: 449 P 449
P
Sbjct: 414 P 414
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 37/168 (22%)
Query: 344 GSFGSVYKGTI------SDGTDVAIKIFNLQRERA----FRSFNSECEVLRNVRHQNLIK 393
G FG V K T + T VA+K+ +E A R SE VL+ V H ++IK
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVKML---KENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 394 ILSSCSTPD-----FKFMPNGSL-----EKRLYSHNYFLDIL-----------ERLNIMI 432
+ +CS ++ GSL E R Y ER M
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 433 DVGSTLEYLHHGH---SSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
D+ S + G + ++H DL +IL+ E +SDFG+S+
Sbjct: 151 DLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 344 GSFGSVY--KGTISDGTDVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V K I+ G + A+K+ ++++ S E ++L+ + H N++K+
Sbjct: 60 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 118
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ ++ G L + S F ++ + I+ V S + Y+H I+H
Sbjct: 119 EDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN----KIVHR 173
Query: 454 DLKPTSILLD---ENMVAHVSDFGIS 476
DLKP ++LL+ ++ + DFG+S
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLS 199
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 438 LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
L+Y+H SA +IH DLKP+++L++EN + DFG+++
Sbjct: 171 LKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 344 GSFGSVY--KGTISDGTDVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V K I+ G + A+K+ ++++ S E ++L+ + H N++K+
Sbjct: 61 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 119
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ ++ G L + S F ++ + I+ V S + Y+H I+H
Sbjct: 120 EDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN----KIVHR 174
Query: 454 DLKPTSILLD---ENMVAHVSDFGIS 476
DLKP ++LL+ ++ + DFG+S
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLS 200
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 20/146 (13%)
Query: 344 GSFGSV----YKGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILS 396
GSFG V +K T G A+KI + Q+ + +E +L+ V L+K+
Sbjct: 53 GSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
S ++ P G + L F + R + T EYLH S +I
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLI 164
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLKP ++++D+ V+DFG +K
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 21/128 (16%)
Query: 357 GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSL 411
G VA+K+ +L++++ +E ++R+ +H N++++ S + +F+ G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 412 EKRLYSHNYFLDILE--RLN---IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM 466
DI+ RLN I + L+ L + H+ +IH D+K SILL +
Sbjct: 130 ----------TDIVSQVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178
Query: 467 VAHVSDFG 474
+SDFG
Sbjct: 179 RVKLSDFG 186
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 438 LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
L+Y+H SA +IH DLKP+++L++EN + DFG+++
Sbjct: 172 LKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 344 GSFGSVY--KGTISDGTDVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V K I+ G + A+K+ ++++ S E ++L+ + H N++K+
Sbjct: 37 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ ++ G L + S F ++ + I+ V S + Y+H I+H
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN----KIVHR 150
Query: 454 DLKPTSILLD---ENMVAHVSDFGIS 476
DLKP ++LL+ ++ + DFG+S
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 344 GSFGSVYKGTISDGTDV-AIKIFN-LQRERAFRSFNSECEVLRNVRHQNLIKILS--SCS 399
G+ +V++G D+ AIK+FN + R E EVL+ + H+N++K+ + +
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET 79
Query: 400 TPDFK-----FMPNGSLEKRLY--SHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIH 452
T K F P GSL L S+ Y L E L ++ DV + +L I+H
Sbjct: 80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN----GIVH 135
Query: 453 CDLKPTSILL----DENMVAHVSDFGISKLL 479
++KP +I+ D V ++DFG ++ L
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLN 429
S +E VL ++H N++ + + + + G L R+ ++ + +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASR 120
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL---LDENMVAHVSDFGISKL 478
++ V ++YLH I+H DLKP ++L LDE+ +SDFG+SK+
Sbjct: 121 LIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 344 GSFGSVY--KGTISDGTDVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V K I+ G + A+K+ ++++ S E ++L+ + H N++K+
Sbjct: 43 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 101
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ ++ G L + S F ++ + I+ V S + Y+H I+H
Sbjct: 102 EDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN----KIVHR 156
Query: 454 DLKPTSILLD---ENMVAHVSDFGIS 476
DLKP ++LL+ ++ + DFG+S
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLS 182
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKXVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 148 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ S L + H+ I H D+KP++IL+D+N +SDFG S+ +
Sbjct: 157 IKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 154 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 174 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKXVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 174 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDF-----KFMPNGSLEKRLYSHNYFLDI 424
E+ +E +L+++ H N+IK+ + +F G L +++ + + F D
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DE 145
Query: 425 LERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN---MVAHVSDFGIS 476
+ NIM + S + YLH + I+H D+KP +ILL+ + + DFG+S
Sbjct: 146 CDAANIMKQILSGICYLHKHN----IVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 424 ILERL--NIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I ER+ + + + L YL H +IH D+KP++ILLDE + DFGIS L
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRL 175
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L K+ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH----SLDLIYRD 167
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG +K
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 343 AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
+G+FG V++ + G K N + +E ++ + H LI + +
Sbjct: 61 SGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK 120
Query: 402 D-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
+F+ G L R+ + +Y + E +N M L+++H HS I+H D+K
Sbjct: 121 YEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-HS---IVHLDIK 176
Query: 457 PTSILLDENMVAHVS--DFGISKLL 479
P +I+ + + V DFG++ L
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKL 201
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 5 IPTE-IGNLQNLKSLFLGANNLSGLIPPMIFN-ISTIRNLNLGGNRLSGHLPSMIGHSLP 62
+PT+ L L+ L+L N + IP FN + ++R L+LG + ++ L
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLV 156
Query: 63 NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNL 122
N++YL LG NL IPN +T +L L+L N P +F L L L L+ +
Sbjct: 157 NLRYLNLGMCNL-KDIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
Query: 123 TTESSSAY 130
T +A+
Sbjct: 215 ATIERNAF 222
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 94/265 (35%), Gaps = 59/265 (22%)
Query: 60 SLP-NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLL 118
S+P N +YL L +N++ ++ + L IL L N F L L+ L L
Sbjct: 32 SIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 91
Query: 119 MNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECK 178
N LTT + A++ +LS L L L NP+ I P N SL+R
Sbjct: 92 DNRLTTVPTQAFE--YLSKLRE------LWLRNNPIESI-PSYAFNRVPSLRRL------ 136
Query: 179 LKGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLPETNLQGYVPXXXXXX 238
++G L+ L Y+S + L L+ L NL+
Sbjct: 137 -------DLGELKRLEYIS----------EAAFEGLVNLRYLNLGMCNLKDI-------- 171
Query: 239 XXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXX 298
P L +L L EL+L N+L P S L + ++
Sbjct: 172 ------------------PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 213
Query: 299 XXXXXXXXVQKLKVLRVLDLSRNQL 323
LK L L+LS N L
Sbjct: 214 VATIERNAFDDLKSLEELNLSHNNL 238
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLN 429
S +E VL ++H N++ + + + + G L R+ ++ + +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASR 120
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL---LDENMVAHVSDFGISKL 478
++ V ++YLH I+H DLKP ++L LDE+ +SDFG+SK+
Sbjct: 121 LIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLN 429
S +E VL ++H N++ + + + + G L R+ ++ + +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASR 120
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL---LDENMVAHVSDFGISKL 478
++ V ++YLH I+H DLKP ++L LDE+ +SDFG+SK+
Sbjct: 121 LIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + FG+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKXVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 375 SFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLN 429
S +E VL ++H N++ + + + + G L R+ ++ + +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASR 120
Query: 430 IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL---LDENMVAHVSDFGISKL 478
++ V ++YLH I+H DLKP ++L LDE+ +SDFG+SK+
Sbjct: 121 LIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + D G+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 111
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 112 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++L+D+ V+DFG +K
Sbjct: 154 TFEYLH----SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 114
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 115 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 111
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 112 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 70 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 116
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 117 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 175
Query: 477 KLLG 480
+ G
Sbjct: 176 RTAG 179
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 99/238 (41%), Gaps = 26/238 (10%)
Query: 63 NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNL 122
N +YL L +NN+ ++ + L +L LG N+ F L L+ L L N L
Sbjct: 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135
Query: 123 TTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGT 182
T S A++ +LS L L L NP+ I P N SL R E K
Sbjct: 136 TVIPSGAFE--YLSKLRE------LWLRNNPIESI-PSYAFNRVPSLMRLDLGELKKLEY 186
Query: 183 IPKEIGHLRGLI---YLSLGFNDLNGTIP--TSIGTLKQLQ--GFFLPETNLQGYVPXXX 235
I + G GL YL+LG ++ +P T + L++L+ G PE P
Sbjct: 187 ISE--GAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIR-----PGSF 238
Query: 236 XXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWS-LGYILEI 292
++S L SL EL+L N L SS+P L++ L Y++E+
Sbjct: 239 HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNL-SSLPHDLFTPLRYLVEL 295
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFN-ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELG 70
L L+ L+L N + IP FN + ++ L+LG + ++ L N+KYL LG
Sbjct: 146 LSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204
Query: 71 DNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAY 130
N I +PN +T L L++ N F P +F L L L ++ + ++ +A+
Sbjct: 205 MCN-IKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262
Query: 131 Q-----------WSFLSSL-----TNCRYLVYLILSGNP 153
+ LSSL T RYLV L L NP
Sbjct: 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 301
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + D G+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 111
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 112 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 29/114 (25%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-------FKFMPNGSLEK--------RLYSHNYFL 422
E +L+ + H N++K++ P+ F+ + G + + + YF
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 423 DILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
D+++ +EYLH+ IIH D+KP+++L+ E+ ++DFG+S
Sbjct: 145 DLIK----------GIEYLHY----QKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 61 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 107
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 108 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLA 166
Query: 477 KLLG 480
+ G
Sbjct: 167 RTAG 170
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKVVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 18/169 (10%)
Query: 327 IPSTIGALVDLETISLA-----GSFGSVYKGTI----SDGTDVAIKIF-NLQRERAFRSF 376
+PST + E I L G FG V++G + VAIK N + F
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 377 NSECEVLRNVRHQNLIKILSSCST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMI 432
E +R H +++K++ + P + M G L L + LD+ +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ + L YL S +H D+ ++L+ N + DFG+S+ + +
Sbjct: 499 QLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + DF +++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G S S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 111
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 112 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKVVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 111
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 112 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM- 431
+E VL+N RH L + + T D ++ G L L F + ER
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYG 116
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S LEYLH S +++ D+K +++LD++ ++DFG+ K
Sbjct: 117 AEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 38 GAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 395 LSSCSTPD------FKFMPNGSLEKRLYS-----------HNYFLDILERLNIMIDVGST 437
L +C+ P +F G+L L S + FL + + V
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKG 156
Query: 438 LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+E+L +S IH DL +ILL E V + DFG+++
Sbjct: 157 MEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKVVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 46/179 (25%)
Query: 335 VDLETISLAGS--FGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNL 391
+D + I L GS FG V+K DG I+ E+A R E + L + H N+
Sbjct: 12 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNI 67
Query: 392 I----------------------------------KILSSCSTPDFKFMPNGSLEKRLYS 417
+ + + C +F G+LE+ +
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 418 HN-YFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGI 475
LD + L + + ++Y+H S +IH DLKP++I L + + DFG+
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 69 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 115
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Query: 477 KLLG 480
+ G
Sbjct: 175 RTAG 178
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 106 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 152
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Query: 477 KLLG 480
+ G
Sbjct: 212 RTAG 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 328 PSTIGALVDLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSEC 380
P ++ +E I G++G VYK G VA+K L E A R E
Sbjct: 2 PGSMENFQKVEKIG-EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 381 EVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLE 439
+L+ + H N++K+L T + ++ L + L + F+D I + + S L
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKT---FMDASALTGIPLPLIKSYLF 113
Query: 440 YLHHGHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
L G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
T EYLH S +I+ DLKP ++++D+ V+DFG +K
Sbjct: 153 TFEYLH----SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L K+ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 167
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG +K
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 6 PTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIK 65
P L L+ L+L N L L ++ + +L L GNR+S +P L ++
Sbjct: 121 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRGLHSLD 179
Query: 66 YLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE 125
L L N + P++ + +L+ L L N S LR L L L N +
Sbjct: 180 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 239
Query: 126 SSSAYQWSFLSSL 138
+ W++L
Sbjct: 240 CRARPLWAWLQKF 252
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 19/146 (13%)
Query: 344 GSFGSVYKGTISDGTDV-AIKIFNLQRERAFRSFNSEC-----EVLRNVRHQNLIKILSS 397
GSFG V + + D+ A+K+ L+++ + + EC +L R+ + L
Sbjct: 34 GSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFC 91
Query: 398 C-STPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
C TPD +F+ G L + F + R ++ S L +LH II
Sbjct: 92 CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH----DKGII 146
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK 477
+ DLK ++LLD ++DFG+ K
Sbjct: 147 YRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 73 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 119
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 120 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 178
Query: 477 KLLG 480
+ G
Sbjct: 179 RTAG 182
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNLQRERAFRSFN---SECEVLRNVRHQNLIKILSSCS 399
GSFG V + G A+KI + Q+ + +E +L+ V L K+ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
++ P G + L F + R + T EYLH S +I+ D
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH----SLDLIYRD 167
Query: 455 LKPTSILLDENMVAHVSDFGISK 477
LKP ++++D+ V+DFG +K
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKVVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 38/157 (24%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN--LQRE----RAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VAIK + Q E RA+R E +L++++H+N+I +L
Sbjct: 52 SGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIGLL 107
Query: 396 SSCSTPDFKFMPNGSLEKRLYSHNYFLDIL--------------ERLNIMI-DVGSTLEY 440
F P SL + Y + + E++ ++ + L+Y
Sbjct: 108 DV-------FTPASSL-RNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA ++H DLKP ++ ++E+ + DFG+++
Sbjct: 160 IH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 6 PTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIK 65
P L L+ L+L N L L ++ + +L L GNR+S +P L ++
Sbjct: 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRGLHSLD 180
Query: 66 YLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE 125
L L N + P++ + +L+ L L N S LR L L L N +
Sbjct: 181 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240
Query: 126 SSSAYQWSFLSSL 138
+ W++L
Sbjct: 241 CRARPLWAWLQKF 253
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 328 PSTIGALVDLETISLAGSFGSVYKGTIS-DGTDVAIKIFNL--QRERAFRSFNSECEVLR 384
P ++ +E I G++G VYK G VA+K L + E + E +L+
Sbjct: 2 PGSMENFQKVEKIG-EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 385 NVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHH 443
+ H N++K+L T + ++ +++ L F+D I + + S L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDL---KKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 444 GHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 62 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 108
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 167
Query: 477 KLLG 480
+ G
Sbjct: 168 RTAG 171
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 69 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 115
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 174
Query: 477 KLLG 480
+ G
Sbjct: 175 RTAG 178
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 69 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 115
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 174
Query: 477 KLLG 480
+ G
Sbjct: 175 RTAG 178
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN------LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VA+K + + +R +R E +L++++H+N+I +L
Sbjct: 32 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR----ELRLLKHMKHENVIGLL 87
Query: 396 SSCSTPDFKFMPNGSLEK----RLYSHNYFLDI-----LERLN------IMIDVGSTLEY 440
F P SLE+ L +H D+ ++L ++ + L+Y
Sbjct: 88 DV-------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA IIH DLKP+++ ++E+ + D G+++
Sbjct: 141 IH----SADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 62 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 108
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 167
Query: 477 KLLG 480
+ G
Sbjct: 168 RTAG 171
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 328 PSTIGALVDLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSEC 380
P ++ +E I G++G VYK G VA+K L E A R E
Sbjct: 2 PGSMENFQKVEKIG-EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 56
Query: 381 EVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLE 439
+L+ + H N++K+L T + ++ L + L F+D I + + S L
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLF 113
Query: 440 YLHHGHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
L G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 67 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 113
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 172
Query: 477 KLLG 480
+ G
Sbjct: 173 RTAG 176
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 61 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 107
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 166
Query: 477 KLLG 480
+ G
Sbjct: 167 RTAG 170
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 85
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H DL + ++ + + DFG+++ + E
Sbjct: 146 LN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 25 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 82
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 83 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 142
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H DL + ++ + + DFG+++ + E
Sbjct: 143 LN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 328 PSTIGALVDLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSEC 380
P ++ +E I G++G VYK G VA+K L E A R E
Sbjct: 1 PGSMENFQKVEKIG-EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 381 EVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLE 439
+L+ + H N++K+L T + ++ L + L F+D I + + S L
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLF 112
Query: 440 YLHHGHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
L G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 62 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 108
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 167
Query: 477 KLLG 480
+ G
Sbjct: 168 RTAG 171
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 38/157 (24%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFN--LQRE----RAFRSFNSECEVLRNVRHQNLIKIL 395
+G++GSV G VAIK + Q E RA+R E +L++++H+N+I +L
Sbjct: 34 SGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIGLL 89
Query: 396 SSCSTPDFKFMPNGSLEKRLYSHNYFLDIL--------------ERLNIMI-DVGSTLEY 440
F P SL + Y + + E++ ++ + L+Y
Sbjct: 90 DV-------FTPASSL-RNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+H SA ++H DLKP ++ ++E+ + DFG+++
Sbjct: 142 IH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 85
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H DL + ++ + + DFG+++ + E
Sbjct: 146 LN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 76
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 77 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFG 161
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P +LE+ + Y + L N
Sbjct: 106 KRAYR----ELVLMKCVNHKNIISLLNV-------FTPQKTLEE--FQDVYLVMELMDAN 152
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 211
Query: 477 KLLG 480
+ G
Sbjct: 212 RTAG 215
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 33/121 (27%)
Query: 377 NSECEVLRNVRHQNLIK---------------ILSSCSTPDFKFMPNGSLEKRL---YSH 418
E ++LR +RH+N+I+ ++ C + M + EKR +H
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVC-GMQEMLDSVPEKRFPVCQAH 112
Query: 419 NYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
YF +++ LEYLH S I+H D+KP ++LL +S G+++
Sbjct: 113 GYFCQLID----------GLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158
Query: 479 L 479
L
Sbjct: 159 L 159
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 328 PSTIGALVDLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSEC 380
P ++ +E I G++G VYK G VA+K L E A R E
Sbjct: 1 PGSMENFQKVEKIG-EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 381 EVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLE 439
+L+ + H N++K+L T + ++ L + L F+D I + + S L
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLF 112
Query: 440 YLHHGHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
L G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS+ IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 27/124 (21%)
Query: 370 ERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLN 429
+RA+R E +++ V H+N+I +L+ F P SLE+ + Y + L N
Sbjct: 68 KRAYR----ELVLMKCVNHKNIIGLLNV-------FTPQKSLEE--FQDVYIVMELMDAN 114
Query: 430 IMIDVGSTLEY-------------LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ + L++ + H HS A IIH DLKP++I++ + + DFG++
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 477 KLLG 480
+ G
Sbjct: 174 RTAG 177
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 344 GSFGSVYKG------TISDGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKIL 395
G+FG V + + VA+K+ R+ SE ++L ++ H N++ +L
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97
Query: 396 SSCSTPD------FKFMPNGSLEKRLYS-----------HNYFLDILERLNIMIDVGSTL 438
+C+ P +F G+L L S + FL + + V +
Sbjct: 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGM 157
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
E+L +S IH DL +ILL E V + DFG+++
Sbjct: 158 EFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 73
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 74 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 72
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 73 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 328 PSTIGALVDLETISLAGSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSEC 380
P ++ +E I G++G VYK G VA+K L E A R E
Sbjct: 1 PGSMENFQKVEKIG-EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EI 55
Query: 381 EVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLE 439
+L+ + H N++K+L T + ++ L + L F+D I + + S L
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLF 112
Query: 440 YLHHGHS---SAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
L G + S ++H DLKP ++L++ ++DFG+++ G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 156
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 76
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 77 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFG 161
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 70
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 71 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 15 LKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNL 74
L L+L N+L+ L P I N+S +R L+L NRL+ LP+ +G S +KY D N+
Sbjct: 249 LTRLYLNGNSLTEL-PAEIKNLSNLRVLDLSHNRLTS-LPAELG-SCFQLKYFYFFD-NM 304
Query: 75 IGTIPNSITNATKLIIL 91
+ T+P N L L
Sbjct: 305 VTTLPWEFGNLCNLQFL 321
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 337 LETISLAGSFGSVYKGTISDGTD-VAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIK 393
LE I G++G+V+K + + VA+K L E S E +L+ ++H+N+++
Sbjct: 7 LEKIG-EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSA 448
+ + F+F + L+K S N LD + + + L + H S
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH----SR 120
Query: 449 PIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
++H DLKP ++L++ N ++DFG+++ G
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTI----SDGTDVAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 31/149 (20%)
Query: 344 GSFGSVYKGTISDGTDV-AIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
GSFG VYKG + +V AIKI +L+ Q I +LS C +P
Sbjct: 30 GSFGEVYKGIDNHTKEVVAIKIIDLE-----------EAEDEIEDIQQEITVLSQCDSPY 78
Query: 403 FKFMPNGSLE--KRLYSHNYF-----LDILER--------LNIMIDVGSTLEYLHHGHSS 447
L+ K Y LD+L+ I+ ++ L+YLH S
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLH----S 134
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGIS 476
IH D+K ++LL E ++DFG++
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 70
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 71 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 27 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 84
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 85 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 144
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L ++ +H DL + ++ + + DFG+++ + E
Sbjct: 145 L----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISDGTD----VAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 85
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 86 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 141
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRYMED 168
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 68
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 69 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 68
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 69 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISDGTD----VAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 49 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 108
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 109 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 164
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 165 IAARNVLVSSNDCVKLGDFGLSRYMED 191
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 70
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 71 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+T++ L+H + IIH D+KP++ILLD + + DFGIS
Sbjct: 133 ATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 68
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 69 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 70
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 71 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 3 GQIPTE--IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS 60
G+I ++ G L +L L L N L+G+ P S I+ L LG N++ + + +
Sbjct: 42 GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLG 100
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFS 99
L +K L L DN + +P S + L L+L N F+
Sbjct: 101 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
LP++ LEL N L G PN+ A+ + L LG N F L L L+L N
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112
Query: 121 NLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPL 154
++ +++ L+SLT+ L L+ NP
Sbjct: 113 QISCVMPGSFE--HLNSLTS------LNLASNPF 138
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 68
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 69 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGI 475
L+I I + +E+LH S ++H DLKP++I + V V DFG+
Sbjct: 167 LHIFIQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISD--GTDVAIKIFNLQRERAF---RSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY+G ++ G + + + +++ F SE +++N+ H +++K++
Sbjct: 35 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 94
Query: 399 ST-PDFKFM---PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
P + M P G L L + L +L + + + + YL S +H D
Sbjct: 95 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRD 150
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ +IL+ + DFG+S+ + +
Sbjct: 151 IAVRNILVASPECVKLGDFGLSRYIED 177
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISD--GTDVAIKIFNLQRERAF---RSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY+G ++ G + + + +++ F SE +++N+ H +++K++
Sbjct: 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 82
Query: 399 ST-PDFKFM---PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
P + M P G L L + L +L + + + + YL S +H D
Sbjct: 83 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ +IL+ + DFG+S+ + +
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIED 165
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISDGTD----VAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 21 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 68
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ + + L + F+D I + + S L L G + S ++H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKT---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 41/194 (21%)
Query: 308 QKLKVLRVLDLSRNQLSGDI--PSTIGALVD--LETISL--AGSFGSVYKGTIS-DGTDV 360
+KL+ L + + R +L + +G L D E IS AG+ G V+K + G +
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVM 61
Query: 361 AIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------------F 403
A K+ +L+ + A R+ +++R +++L C++P
Sbjct: 62 ARKLIHLEIKPAIRN-----QIIRE------LQVLHECNSPYIVGFYGAFYSDGEISICM 110
Query: 404 KFMPNGSLEKRLYSHNYFLD-ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL 462
+ M GSL++ L + IL +++I + G L YL H I+H D+KP++IL+
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREKHK---IMHRDVKPSNILV 165
Query: 463 DENMVAHVSDFGIS 476
+ + DFG+S
Sbjct: 166 NSRGEIKLCDFGVS 179
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 31/161 (19%)
Query: 344 GSFGSVYKG------TISDGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKIL 395
G+FG V + + VA+K+ R+ SE ++L ++ H N++ +L
Sbjct: 40 GAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 99
Query: 396 SSCSTPD------FKFMPNGSLEKRLYS-------------HNYFLDILERLNIMIDVGS 436
+C+ P +F G+L L S + FL + + V
Sbjct: 100 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAK 159
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+E+L +S IH DL +ILL E V + DFG+++
Sbjct: 160 GMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 40 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 98
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 99 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD--FLTLEHLICYS 156
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 157 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 343 AGSFGSVYKGTISD-GTDVAIKIF-NLQRERAFRSFN-SECEVLRNVRHQNLIKILSSCS 399
GS+G V+K D G VAIK F + + + E +L+ ++H NL+ +L
Sbjct: 13 EGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR 72
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
F++ + L + Y + E L I TL+ ++ H IH D
Sbjct: 73 RKRRLHLVFEYCDHTVLHE---LDRYQRGVPEHLVKSI-TWQTLQAVNFCHKHN-CIHRD 127
Query: 455 LKPTSILLDENMVAHVSDFGISKLL 479
+KP +IL+ ++ V + DFG ++LL
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLL 152
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 43/193 (22%)
Query: 308 QKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISL--AGSFGSVYKGT-ISDGTDVAIKI 364
Q+ K L L++ Q G++ D E IS AG+ G V+K + G +A K+
Sbjct: 47 QQRKRLEAF-LTQKQKVGELKDD-----DFEKISELGAGNGGVVFKVSHKPSGLVMARKL 100
Query: 365 FNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------------FKFMP 407
+L+ + A R+ +++R +++L C++P + M
Sbjct: 101 IHLEIKPAIRN-----QIIRE------LQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 149
Query: 408 NGSLEKRLYSHNYFLD-ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM 466
GSL++ L + IL +++I + G L YL H I+H D+KP++IL++
Sbjct: 150 GGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREKHK---IMHRDVKPSNILVNSRG 204
Query: 467 VAHVSDFGISKLL 479
+ DFG+S L
Sbjct: 205 EIKLCDFGVSGQL 217
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISDGTD----VAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 24 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 83
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 84 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 139
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLSRYMED 166
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 85
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H DL + ++ + + DFG+++ + E
Sbjct: 146 LN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 33/140 (23%)
Query: 357 GTDVAIKIF------NLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGS 410
G +VA+K +RA+R E +L+ V H+N+I +L+ F P +
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIISLLNV-------FTPQKT 95
Query: 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEY-------------LHHGHSSAPIIHCDLKP 457
LE+ + Y + L N+ + L++ + H HS A IIH DLKP
Sbjct: 96 LEE--FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKP 152
Query: 458 TSILLDENMVAHVSDFGISK 477
++I++ + + DFG+++
Sbjct: 153 SNIVVKSDCTLKILDFGLAR 172
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 33/140 (23%)
Query: 357 GTDVAIKIF------NLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGS 410
G +VA+K +RA+R E +L+ V H+N+I +L+ F P +
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIISLLNV-------FTPQKT 97
Query: 411 LEKRLYSHNYFLDILERLNIMIDVGSTLEY-------------LHHGHSSAPIIHCDLKP 457
LE+ + Y + L N+ + L++ + H HS A IIH DLKP
Sbjct: 98 LEE--FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKP 154
Query: 458 TSILLDENMVAHVSDFGISK 477
++I++ + + DFG+++
Sbjct: 155 SNIVVKSDCTLKILDFGLAR 174
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFG 154
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 87
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 148 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 18 LFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGT 77
L L N+L L + ++++ L LGGN+L LP+ + + L ++ YL L N L +
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQL-QS 90
Query: 78 IPNSITNA-TKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLS 136
+PN + + T+L L L N F L L L L N L + +
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVF-----D 145
Query: 137 SLTNCRYLVYLILSGNPLGGILP 159
LT+ L Y+ L NP P
Sbjct: 146 RLTS---LQYIWLHDNPWDCTCP 165
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFN-ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELG 70
L +L L+LG N L L P +FN ++++ LNL N+L LP+ + L +K L L
Sbjct: 51 LTSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALN 108
Query: 71 DNNLIGTIPNSITNA-TKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMN 120
N L ++P+ + + T+L L L N F L L + L N
Sbjct: 109 TNQL-QSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISDGTD----VAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 23 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 82
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 83 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 138
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLSRYMED 165
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 85
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H DL + ++ + + DFG+++ + E
Sbjct: 146 LN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNL---QRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSFG+VY + + VAIK + Q ++ E L+ +RH N I+
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 400 TPDFKFMPN----GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
++ GS L H L +E + L YLH S +IH D+
Sbjct: 125 REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDV 180
Query: 456 KPTSILLDENMVAHVSDFGISKLLG 480
K +ILL E + + DFG + ++
Sbjct: 181 KAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 21 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 78
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 79 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 138
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 139 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 75 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYS 191
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 192 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E VL+N RH L + S T D ++ G L L F + R
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 255
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S L+YLH S +++ DLK +++LD++ ++DFG+ K
Sbjct: 256 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 54 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 113
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + L L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 114 TIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 169
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 170 LKPSNLLLNTTXDLKICDFGLARV 193
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISD--GTDVAIKIFNLQRERAF---RSFNSECEVLRNVRHQNLIKILSSC 398
G FG VY+G ++ G + + + +++ F SE +++N+ H +++K++
Sbjct: 19 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 78
Query: 399 ST-PDFKFM---PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
P + M P G L L + L +L + + + + YL S +H D
Sbjct: 79 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRD 134
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ +IL+ + DFG+S+ + +
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRYIED 161
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 43/191 (22%)
Query: 307 VQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISL--AGSFGSVYKGTIS-DGTDVAIK 363
+Q+ K L L++ Q G++ D E IS AG+ G V+K + G +A K
Sbjct: 3 LQQRKRLEAF-LTQKQKVGELKDD-----DFEKISELGAGNGGVVFKVSHKPSGLVMARK 56
Query: 364 IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD-----------------FKFM 406
+ +L+ + A R+ +++R +++L C++P + M
Sbjct: 57 LIHLEIKPAIRN-----QIIRE------LQVLHECNSPYIVGFYGAFYSDGEISICMEHM 105
Query: 407 PNGSLEKRLYSHNYFLD-ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDEN 465
GSL++ L + IL +++I + G L YL H I+H D+KP++IL++
Sbjct: 106 DGGSLDQVLKKAGRIPEQILGKVSIAVIKG--LTYLREKHK---IMHRDVKPSNILVNSR 160
Query: 466 MVAHVSDFGIS 476
+ DFG+S
Sbjct: 161 GEIKLCDFGVS 171
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 8 EIGN-----LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGN------RLSGHLPSM 56
++GN L +L+ L L NN+ L P + +S +R L+L L+ H P++
Sbjct: 262 DVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASH-PNI 320
Query: 57 IGHSLPNIKYLE---LGDNNLIGTIPNSITNATKLIILDLG--FNTFSGHIPNTFGNLRH 111
S +KYLE + DNN+ T N+ T L L L F + TF +L H
Sbjct: 321 DDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAH 380
Query: 112 --LSVLSLLMNNLTTESSSAYQW 132
L L+L N+++ ++ + W
Sbjct: 381 SPLLTLNLTKNHISKIANGTFSW 403
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 57 IGHSLP-NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVL 115
I LP NI L L N L P + T ++L ILD GFN+ S P L L VL
Sbjct: 19 IPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVL 78
Query: 116 SLLMNNLTTESSSAY 130
+L N L+ S +
Sbjct: 79 NLQHNELSQISDQTF 93
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTISDGTD----VAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 18 GQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 77
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L Y LD+ + + + L YL S +H D
Sbjct: 78 TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRD 133
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRYMED 160
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 37/165 (22%)
Query: 344 GSFGSVYKG------TISDGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKIL 395
G+FG V + + VA+K+ R+ SE ++L ++ H N++ +L
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 88
Query: 396 SSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+C+ P +F +F+P + LY FL + +
Sbjct: 89 GACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYSF 146
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 147 QVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E VL+N RH L + S T D ++ G L L F + R
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 258
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S L+YLH S +++ DLK +++LD++ ++DFG+ K
Sbjct: 259 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAP 97
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 98 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 153
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARV 177
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 37/165 (22%)
Query: 344 GSFGSVYKG------TISDGTDVAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKIL 395
G+FG V + + VA+K+ R+ SE ++L ++ H N++ +L
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 88
Query: 396 SSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+C+ P +F +F+P + LY FL + +
Sbjct: 89 GACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYSF 146
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 147 QVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 29 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 87
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 88 LGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYS 145
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 426 ERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISK 477
E IM D+G+ +++LH S I H D+KP ++L +++ V ++DFG +K
Sbjct: 129 EAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSC-STP 401
GS+GSVYK + G VAIK + E + E +++ +++K S
Sbjct: 40 GSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNT 97
Query: 402 D----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKP 457
D ++ GS+ + N L E I+ LEYLH IH D+K
Sbjct: 98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK----IHRDIKA 153
Query: 458 TSILLDENMVAHVSDFGIS 476
+ILL+ A ++DFG++
Sbjct: 154 GNILLNTEGHAKLADFGVA 172
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 34/163 (20%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 39 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 97
Query: 395 LSSCSTPD------FKFMPNGSLEKRLYS--------------HNYFLDILERLNIMIDV 434
L +C+ P +F G+L L S + FL + + V
Sbjct: 98 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQV 157
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+E+L +S IH DL +ILL E V + DFG+++
Sbjct: 158 AKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 38 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYS 154
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E VL+N RH L + S T D ++ G L L F + R
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 115
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S L+YLH S +++ DLK +++LD++ ++DFG+ K
Sbjct: 116 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E VL+N RH L + S T D ++ G L L F + R
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 116
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S L+YLH S +++ DLK +++LD++ ++DFG+ K
Sbjct: 117 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 344 GSFGSVY--KGTISDGTDVAIKIF---NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
GSFG V K I+ G + A+K+ ++++ S E ++L+ + H N+ K+
Sbjct: 37 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFF 95
Query: 399 STPDFKFM-----PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHC 453
+ ++ G L + S F ++ + I+ V S + Y H I+H
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYXHKN----KIVHR 150
Query: 454 DLKPTSILLD---ENMVAHVSDFGIS 476
DLKP ++LL+ ++ + DFG+S
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMI 432
+E VL+N RH L + S T D ++ G L L F + R
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 117
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ S L+YLH S +++ DLK +++LD++ ++DFG+ K
Sbjct: 118 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 423 DILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
DIL ++ + S ++ L H HS +IH D+KP+++L++ + DFGIS L
Sbjct: 153 DILGKIAV-----SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 354 ISDGTDVAIKIF--NLQRERAFR-SFNSECEVLRNVRHQNLIKILSS--CSTPD------ 402
+ D DVA+K+ +L R+ +F F E + + H ++ + + TP
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 403 -FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL 461
+++ +L +++ + + ++ D L + H IIH D+KP +IL
Sbjct: 94 VMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIL 148
Query: 462 LDENMVAHVSDFGISKLLGE 481
+ V DFGI++ + +
Sbjct: 149 ISATNAVKVVDFGIARAIAD 168
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 38 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYS 154
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 29 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 87
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 88 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYS 145
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 72
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
T + F+F+ S++ + + L + I + L+ L HS ++
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VL 128
Query: 452 HCDLKPTSILLDENMVAHVSDFGISKLLG 480
H DLKP ++L++ ++DFG+++ G
Sbjct: 129 HRDLKPENLLINTEGAIKLADFGLARAFG 157
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 97
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 98 TIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 153
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 379 ECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHN-YFLDILERLN------IM 431
E ++L RH+N+I I P + M + + + L + Y L + L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+ L+Y+H SA ++H DLKP+++LL+ + DFG++++
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 39/166 (23%)
Query: 344 GSFGSVYKGTISDGTD-------VAIKIFNL-QRERAFRSFNSECEVLRNVRHQ-NLIKI 394
G+FG V + + G D VA+K+ R+ SE ++L ++ H N++ +
Sbjct: 38 GAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 395 LSSCSTP--------DF---------------KFMPNGSLEKRLYSHNYFLDILERLNIM 431
L +C+ P +F +F+P + LY FL + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLICYS 154
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 426 ERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISK 477
E IM D+G+ +++LH S I H D+KP ++L +++ V ++DFG +K
Sbjct: 110 EAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 54 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 113
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 114 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 169
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 170 LKPSNLLLNTTCDLKICDFGLARV 193
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 97
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 98 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 153
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARV 177
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 344 GSFGSVYKGTISDGTDV----AIKIFN----LQRERAFRSFNSECEVLRNVRHQNLIKIL 395
G++G V+ G D A+K+ +Q+ + +E +VL ++R + L
Sbjct: 65 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL 124
Query: 396 SSCSTPDFK------FMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+ K ++ G L L F + + I VG + L H H
Sbjct: 125 HYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEIVLALEHLHKLG- 179
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISK 477
II+ D+K +ILLD N ++DFG+SK
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSK 207
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 379 ECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHN-YFLDILERLN------IM 431
E ++L RH+N+I I P + M + + + L + Y L + L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+ L+Y+H SA ++H DLKP+++LL+ + DFG++++
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 28/153 (18%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 70
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---S 447
T + F+F+ + L+K F+D I + + S L L G + S
Sbjct: 71 VIHTENKLYLVFEFL-SMDLKK-------FMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 448 APIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
++H DLKP ++L++ ++DFG+++ G
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 97
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 98 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 153
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 39 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 98
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 99 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 154
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARV 178
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 32 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 91
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 92 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 147
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARV 171
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 32 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 91
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 92 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 147
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARV 171
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 36 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 95
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 96 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 151
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 39 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 98
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 99 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 154
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 40 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 99
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 100 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 155
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 156 LKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 31 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 90
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 91 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 146
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 147 LKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 38 GAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 97
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 98 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 153
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 423 DILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
DIL ++ + S ++ L H HS +IH D+KP+++L++ + DFGIS L
Sbjct: 109 DILGKIAV-----SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 42 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 101
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 102 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 157
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 158 LKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 34 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 93
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 94 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 149
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 150 LKPSNLLLNTTCDLKICDFGLARV 173
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAI-KIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAI KI + + + E ++L RH+N+I I P
Sbjct: 38 GAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 97
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 98 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 153
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARV 177
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 379 ECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHN-YFLDILERLN------IM 431
E ++L RH+N+I I P + M + + + L + Y L + L+ +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+ L+Y+H SA ++H DLKP+++LL+ + DFG++++
Sbjct: 131 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 344 GSFGSVY-KGTISDGTDVAIKIFNL---QRERAFRSFNSECEVLRNVRHQNLIKILSSCS 399
GSFG+VY + + VAIK + Q ++ E L+ +RH N I+
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 400 TPDFKFMPN----GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
++ GS L H L +E + L YLH S +IH D+
Sbjct: 86 REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDV 141
Query: 456 KPTSILLDENMVAHVSDFGISKLLG 480
K +ILL E + + DFG + ++
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 86
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 147 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 80
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 141 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
+E VL + H N+IK+ TP + + G L R+ Y+ + + + +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-RDAADAV 154
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDE---NMVAHVSDFGISKLL 479
+ + YLH I+H DLKP ++L + ++DFG+SK++
Sbjct: 155 KQILEAVAYLHENG----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 72
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L L F+D I + + S L L G + S ++H
Sbjct: 73 VIHTENKLYLVFEFLSMDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 27 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 84
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 85 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 144
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 145 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 115
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 116 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 175
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H DL + ++ E+ + DFG+++ + E
Sbjct: 176 LN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 37/165 (22%)
Query: 336 DLETISL--AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V+K + G +A K+ +L+ + A R+ +++R +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------L 55
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYFLD-ILERLNIMIDV 434
++L C++P + M GSL++ L + IL +++I +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
G L YL H I+H D+KP++IL++ + DFG+S L
Sbjct: 116 G--LTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 87
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 148 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 37/162 (22%)
Query: 336 DLETISL--AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V+K + G +A K+ +L+ + A R+ +++R +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------L 55
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYFLD-ILERLNIMIDV 434
++L C++P + M GSL++ L + IL +++I +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
G L YL H I+H D+KP++IL++ + DFG+S
Sbjct: 116 G--LTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 34 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 93
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 94 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 149
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 150 LKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 86
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 147 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 37/162 (22%)
Query: 336 DLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V+K + G +A K+ +L+ + A R+ +++R +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------L 58
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYFLD-ILERLNIMIDV 434
++L C++P + M GSL++ L + IL +++I +
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 118
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
G L YL H I+H D+KP++IL++ + DFG+S
Sbjct: 119 G--LTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 37/162 (22%)
Query: 336 DLETISL--AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V+K + G +A K+ +L+ + A R+ +++R +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------L 55
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYFLD-ILERLNIMIDV 434
++L C++P + M GSL++ L + IL +++I +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
G L YL H I+H D+KP++IL++ + DFG+S
Sbjct: 116 G--LTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 18/169 (10%)
Query: 327 IPSTIGALVDLETISLA-----GSFGSVYKGTI----SDGTDVAIKIF-NLQRERAFRSF 376
+PST + E I L G FG V++G + VAIK N + F
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 377 NSECEVLRNVRHQNLIKILSSCST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMI 432
E +R H +++K++ + P + M G L L + LD+ +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
+ + L YL S +H D+ ++L+ + DFG+S+ + +
Sbjct: 499 QLSTALAYLE----SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 8 EIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYL 67
+ NL+NL +L L N +S + P + + L L N+L LP + +L ++
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVH 129
Query: 68 ELGDNNLIGTIPNSITNA-TKLIILDLGFNTF--SGHIPNTFGNLRHLSVLSLLMNNLTT 124
E N I + S+ N ++I+++LG N SG F ++ LS + + N+TT
Sbjct: 130 E----NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 354 ISDGTDVAIKIF--NLQRERAFR-SFNSECEVLRNVRHQNLIKILSS--CSTPD------ 402
+ D DVA+K+ +L R+ +F F E + + H ++ + + TP
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 403 -FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL 461
+++ +L +++ + + ++ D L + H IIH D+KP +I+
Sbjct: 94 VMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIM 148
Query: 462 LDENMVAHVSDFGISKLLGE 481
+ V DFGI++ + +
Sbjct: 149 ISATNAVKVMDFGIARAIAD 168
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTI----SDGTDVAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L + LD+ + + + L YL S +H D
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE----SKRFVHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ N + DFG+S+ + +
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+K L E A R E +L+ + H N++K+L
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 71
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L L F+D I + + S L L G + S ++H
Sbjct: 72 VIHTENKLYLVFEFLSMDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 37/162 (22%)
Query: 336 DLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V+K + G +A K+ +L+ + A R+ +++R +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------L 55
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYFLD-ILERLNIMIDV 434
++L C++P + M GSL++ L + IL +++I +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
G L YL H I+H D+KP++IL++ + DFG+S
Sbjct: 116 G--LTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 37/162 (22%)
Query: 336 DLETISL--AGSFGSVYKGTIS-DGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V+K + G +A K+ +L+ + A R+ +++R +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------L 55
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYFLD-ILERLNIMIDV 434
++L C++P + M GSL++ L + IL +++I +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
G L YL H I+H D+KP++IL++ + DFG+S
Sbjct: 116 G--LTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 93
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 154 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 354 ISDGTDVAIKIF--NLQRERAFR-SFNSECEVLRNVRHQNLIKILSS--CSTPD------ 402
+ D DVA+K+ +L R+ +F F E + + H ++ + + TP
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 403 -FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL 461
+++ +L +++ + + ++ D L + H IIH D+KP +I+
Sbjct: 94 VMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIM 148
Query: 462 LDENMVAHVSDFGISKLLGE 481
+ V DFGI++ + +
Sbjct: 149 ISATNAVKVMDFGIARAIAD 168
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 344 GSFGSVYKGTIS-DGTDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
G++G V + + VAIK I + + + E ++L RH+N+I I P
Sbjct: 36 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAP 95
Query: 402 DFKFMPNGSLEKRLYSHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCD 454
+ M + + + L + Y L + L+ + + L+Y+H SA ++H D
Sbjct: 96 TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH----SANVLHRD 151
Query: 455 LKPTSILLDENMVAHVSDFGISKL 478
LKP+++LL+ + DFG++++
Sbjct: 152 LKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 26 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 83
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYS------HNYFL---DILERLNIMIDVGSTLEY 440
L S + M G L+ L S +N L + + + + ++ + Y
Sbjct: 84 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 143
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 144 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 8 EIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYL 67
+ NL+NL +L L N +S + P + + L L N+L LP + +L ++
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVH 129
Query: 68 ELGDNNLIGTIPNSITNA-TKLIILDLGFNTF--SGHIPNTFGNLRHLSVLSLLMNNLTT 124
E N I + S+ N ++I+++LG N SG F ++ LS + + N+TT
Sbjct: 130 E----NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 93
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYS------HNYFL---DILERLNIMIDVGSTLEY 440
L S + M G L+ L S +N L + + + + ++ + Y
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + ++ E+ + DFG+++ + E
Sbjct: 154 LNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 379 ECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHN-YFLDILERLN------IM 431
E ++L RH+N+I I P + M + + + L + Y L + L+ +
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+ L+Y+H SA ++H DLKP+++LL+ + DFG++++
Sbjct: 133 YQILRGLKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 423 DILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
DIL ++ + I ++ L H HS +IH D+KP+++L++ DFGIS L
Sbjct: 136 DILGKIAVSI-----VKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 337 LETISLAGSFGSVYKGTISDGTD-VAIKIFNLQR--ERAFRSFNSECEVLRNVRHQNLIK 393
LE I G++G+V+K + + VA+K L E S E +L+ ++H+N+++
Sbjct: 7 LEKIG-EGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 394 ILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSA 448
+ + F+F + L+K S N LD + + + L + H S
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH----SR 120
Query: 449 PIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
++H DLKP ++L++ N +++FG+++ G
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 379 ECEVLRNVRHQNLIKILSSCSTPDFKFMPN--------GSLEKRLYSHNYFLDILERLNI 430
E +L + H +++K+L D + S K+L+ +L L +
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL 161
Query: 431 MIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
+ ++ ++Y+H SA I+H DLKP + L++++ V DFG+++ +
Sbjct: 162 LYNLLVGVKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Query: 6 PTEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIK 65
P L L+ L+L NNL L ++ + +L L GNR+ +P L ++
Sbjct: 121 PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPS-VPEHAFRGLHSLD 179
Query: 66 YLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTE 125
L L N++ P++ + +L+ L L N S LR L L L N +
Sbjct: 180 RLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWVCD 239
Query: 126 SSSAYQWSFLSSL 138
+ W++L
Sbjct: 240 CRARPLWAWLQKF 252
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 87/242 (35%), Gaps = 61/242 (25%)
Query: 13 QNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGN-----------RLSGHLPSM----- 56
+NL L+L +N L+G+ ++ + L+L N R GHL ++
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 57 --------IGHSLPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFN--------TFSG 100
+ L ++YL L DNNL N+ + L L L N F G
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRG 174
Query: 101 ------------HI----PNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYL 144
H+ P+ F +L L L L NNL+ + L R L
Sbjct: 175 LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEV--------LVPLRSL 226
Query: 145 VYLILSGNPLGGILPPSIGNFSTSLQRFSASECKLKGTIPKEIGHLRGLIYLSLGFNDLN 204
YL L+ NP + LQ+F S ++ +P+ + G L +DL
Sbjct: 227 QYLRLNDNPW--VCDCRARPLWAWLQKFRGSSSEVPCNLPQRLA---GRDLKRLAASDLE 281
Query: 205 GT 206
G
Sbjct: 282 GC 283
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 11 NLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELG 70
+L L +L L N L+ L + +++ + L LGGN+L LPS + L +K L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLN 139
Query: 71 DNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNL 122
N L + T L L L N F L L ++L N
Sbjct: 140 TNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L L L N L L + +++ + L L N+L+ LP + L + L LG
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 72 NNLIGTIPNSITNA-TKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAY 130
N L ++P+ + + TKL L L N F L +L LSL N L + A+
Sbjct: 117 NQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Query: 11 NLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELG 70
+L L +L L N L+ L + +++ + L LGGN+L LPS + L +K L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLN 139
Query: 71 DNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLT---TESS 127
N L + T L L L N F L L ++L N E+
Sbjct: 140 TNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETL 199
Query: 128 SAYQW 132
QW
Sbjct: 200 YLSQW 204
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L L L N L L + +++ + L L N+L+ LP + L + L LG
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 72 NNLIGTIPNSITNA-TKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAY 130
N L ++P+ + + TKL L L N F L +L LSL N L + A+
Sbjct: 117 NQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ------NLIKILS 396
GSFG V K VA+K+ ++ R R E +L ++R Q N+I +L
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166
Query: 397 S-------CSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+ C T + M L K+ + L ++ + S L+ L H +
Sbjct: 167 NFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKF-----AHSILQCLDALHKNR- 220
Query: 450 IIHCDLKPTSILLDENMVA--HVSDFGIS 476
IIHCDLKP +ILL + + V DFG S
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 359 DVAIKIF--NLQRERAFR-SFNSECEVLRNVRHQNLIKILSS--CSTPD-------FKFM 406
DVA+K+ +L R+ +F F E + + H ++ + ++ TP +++
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM 466
+L +++ + + ++ D L + H IIH D+KP +I++
Sbjct: 99 DGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATN 153
Query: 467 VAHVSDFGISKLLGE 481
V DFGI++ + +
Sbjct: 154 AVKVMDFGIARAIAD 168
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ------NLIKILS 396
GSFG V K VA+K+ ++ R R E +L ++R Q N+I +L
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166
Query: 397 S-------CSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+ C T + M L K+ + L ++ + S L+ L H +
Sbjct: 167 NFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKF-----AHSILQCLDALHKNR- 220
Query: 450 IIHCDLKPTSILLDENMVA--HVSDFGIS 476
IIHCDLKP +ILL + + V DFG S
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS 249
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+ L E A R E +L+ + H N++K+L
Sbjct: 14 GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 69
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 70 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRER------AFRSFNSECEVLRNVRHQNLIKILS 396
G++G VYK G VA+ L E A R E +L+ + H N++K+L
Sbjct: 13 GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR----EISLLKELNHPNIVKLLD 68
Query: 397 SCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMID-VGSTLEYLHHGHS---SAPIIH 452
T + ++ L + L F+D I + + S L L G + S ++H
Sbjct: 69 VIHTENKLYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 453 CDLKPTSILLDENMVAHVSDFGISKLLG 480
DLKP ++L++ ++DFG+++ G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 29 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 86
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 87 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 146
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ + +H +L + ++ + + DFG+++ + E
Sbjct: 147 LN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVYKGTISD------GTDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY+G D T VA+K N RER F +E V++ +++++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHVVRL 85
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M +G L+ L S + + E + + ++ + Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L ++ +H +L + ++ + + DFG+++ + E
Sbjct: 146 L----NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 344 GSFGSVY----KGTISDG--TDVAIKIFNLQ---RERAFRSFNSECEVLRNVRHQNLIKI 394
GSFG VY KG + D T VAIK N RER F +E V++ +++++
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEFNCHHVVRL 80
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLD---------ILERLNIMIDVGSTLEY 440
L S + M G L+ L S ++ + + + + ++ + Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 441 LHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLGE 481
L+ +H DL + + E+ + DFG+++ + E
Sbjct: 141 LNANK----FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S LE+LH + II+ DLKP ++LLD++ +SD G++
Sbjct: 300 SGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S LE+LH + II+ DLKP ++LLD++ +SD G++
Sbjct: 300 SGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S LE+LH + II+ DLKP ++LLD++ +SD G++
Sbjct: 300 SGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 344 GSFGSVYKGTISDGTD--VAIKIFNLQRERAFRSF-NSECEVLRNVRHQNLIKILSSCST 400
GSFG V+KG I + T VAIKI +L+ E VL + K S
Sbjct: 34 GSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLK 92
Query: 401 PD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDL 455
+++ GS L + + D + ++ ++ L+YLH S IH D+
Sbjct: 93 GSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH----SEKKIHRDI 146
Query: 456 KPTSILLDENMVAHVSDFGIS 476
K ++LL E ++DFG++
Sbjct: 147 KAANVLLSEQGDVKLADFGVA 167
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHS-LP-NIKYLEL 69
L +L+ L+L N L+ L P + +++ +R L+L NRL +++ H+ LP N++ L++
Sbjct: 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRL-----TVLSHNDLPANLEILDI 533
Query: 70 GDNNLIGTIPNSITNATKLIILDLGFNTF 98
N L+ P+ + L +LD+ N F
Sbjct: 534 SRNQLLAPNPDVFVS---LSVLDITHNKF 559
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 261 SLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXX--XXXXXXXXXVQKLKVLRVLDL 318
+L +LR LDLGS+K+ P + L ++ E+ + LK L LDL
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 319 SRNQL-SGDIPSTIGALVDLETISLAGS 345
S+NQ+ S + + G L L++I + +
Sbjct: 131 SKNQIRSLYLHPSFGKLNSLKSIDFSSN 158
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 436 STLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
S LE+LH + II+ DLKP ++LLD++ +SD G++
Sbjct: 300 SGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 30/151 (19%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
GSFG V K + A+K+ N + + + E E+L+ + H N++K+
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL------ 86
Query: 401 PDFKFMPNGS---LEKRLYSHNYFLD-ILER--------LNIMIDVGSTLEYLHHGHSSA 448
F+ + + S + LY+ D I++R I+ V S + Y+H +
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 449 PIIHCDLKPTSILL---DENMVAHVSDFGIS 476
I+H DLKP +ILL +++ + DFG+S
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 359 DVAIKIF--NLQRERAFR-SFNSECEVLRNVRHQNLIKILSS--CSTPD-------FKFM 406
DVA+K+ +L R+ +F F E + + H ++ + + TP +++
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM 466
+L +++ + + ++ D L + H IIH D+KP +I++
Sbjct: 99 DGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATN 153
Query: 467 VAHVSDFGISKLLGE 481
V DFGI++ + +
Sbjct: 154 AVKVMDFGIARAIAD 168
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 358 TDVAIK-IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLY 416
T VAIK I + + + E ++L RH+N+I I + M + + + L
Sbjct: 69 TRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLM 128
Query: 417 SHN-YFLDILERLN------IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAH 469
+ Y L ++L+ + + L+Y+H SA ++H DLKP+++L++
Sbjct: 129 ETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLINTTCDLK 184
Query: 470 VSDFGISKL 478
+ DFG++++
Sbjct: 185 ICDFGLARI 193
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 359 DVAIKIF--NLQRERAFR-SFNSECEVLRNVRHQNLIKILSS--CSTPD-------FKFM 406
DVA+K+ +L R+ +F F E + + H ++ + + TP +++
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 407 PNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENM 466
+L +++ + + ++ D L + H IIH D+KP +I++
Sbjct: 116 DGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATN 170
Query: 467 VAHVSDFGISKLLGE 481
V DFGI++ + +
Sbjct: 171 AVKVMDFGIARAIAD 185
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 30/151 (19%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
GSFG V K + A+K+ N + + + E E+L+ + H N++K+
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL------ 86
Query: 401 PDFKFMPNGS---LEKRLYSHNYFLD-ILER--------LNIMIDVGSTLEYLHHGHSSA 448
F+ + + S + LY+ D I++R I+ V S + Y+H +
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 449 PIIHCDLKPTSILL---DENMVAHVSDFGIS 476
I+H DLKP +ILL +++ + DFG+S
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 30/151 (19%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
GSFG V K + A+K+ N + + + E E+L+ + H N++K+
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL------ 86
Query: 401 PDFKFMPNGS---LEKRLYSHNYFLD-ILER--------LNIMIDVGSTLEYLHHGHSSA 448
F+ + + S + LY+ D I++R I+ V S + Y+H +
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 449 PIIHCDLKPTSILL---DENMVAHVSDFGIS 476
I+H DLKP +ILL +++ + DFG+S
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
Query: 422 LDILERL----NIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVS--DFGI 475
LD ++R NIM + S L YLH + I H D+KP + L N + DFG+
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLH----NQGICHRDIKPENFLFSTNKSFEIKLVDFGL 216
Query: 476 SK 477
SK
Sbjct: 217 SK 218
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 7 TEIGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKY 66
+ + L NL L L N L L + ++ ++ L L N+L LP + L N+ Y
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTY 137
Query: 67 LELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTES 126
L L N L T L LDL N F L L LSL N L +
Sbjct: 138 LYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Query: 127 SSAYQWSFLSSLT 139
+ L+SLT
Sbjct: 198 DGVF--DRLTSLT 208
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 61 LPNIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPN-TFGNLRHLSVLSLLM 119
LPN++YL LG N L +++ T L L L N +PN F L +L L L+
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVE 118
Query: 120 NNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNFSTSLQRFSASECKL 179
N L + + LTN L YL L N L LP + + T+L R +L
Sbjct: 119 NQLQSLPDGVF-----DKLTN---LTYLYLYHNQLQS-LPKGVFDKLTNLTRLDLDNNQL 169
Query: 180 KGTIPKEIGHLRGLIYLSLGFNDLNGTIPTSI 211
+ L L LSL N L ++P +
Sbjct: 170 QSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGV 200
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L SS IH DL +ILL EN V + DFG+++
Sbjct: 208 VARGMEFL----SSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 344 GSFGSVYKGT--ISDGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR---HQNLIKILS 396
G++G V+K + G VA+K +Q E S E VLR++ H N++++
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 81
Query: 397 SC--STPDFKFMPNGSLEKRLYSHNYFLDILER--------LNIMIDVGSTLEYLHHGHS 446
C S D + E +LD + ++M + L++LH
Sbjct: 82 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---- 137
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
S ++H DLKP +IL+ + ++DFG++++
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 336 DLETISL--AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLI 392
D E IS AG+ G V K G +A K+ +L+ + A R+ +++R +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-----QIIRE------L 65
Query: 393 KILSSCSTPD-----------------FKFMPNGSLEKRLYSHNYF-LDILERLNIMIDV 434
++L C++P + M GSL++ L +IL +++I +
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLR 125
Query: 435 GSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
G L YL H I+H D+KP++IL++ + DFG+S L
Sbjct: 126 G--LAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQL 165
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 344 GSFGSVYKGT--ISDGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR---HQNLIKILS 396
G++G V+K + G VA+K +Q E S E VLR++ H N++++
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 81
Query: 397 SC--STPDFKFMPNGSLEKRLYSHNYFLDILER--------LNIMIDVGSTLEYLHHGHS 446
C S D + E +LD + ++M + L++LH
Sbjct: 82 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---- 137
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
S ++H DLKP +IL+ + ++DFG++++
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 343 AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIK-- 393
+G F V K S G + A K ++ RA R E +LR V H N+I
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 394 -----------ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
IL S + F F+ + ++ IL+ +N YL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----------YL 131
Query: 442 HHGHSSAPIIHCDLKPTSI-LLDENM-VAHVS--DFGIS 476
H + I H DLKP +I LLD+N+ + H+ DFG++
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 344 GSFGSVYKGT--ISDGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR---HQNLIKILS 396
G++G V+K + G VA+K +Q E S E VLR++ H N++++
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 81
Query: 397 SC--STPDFKFMPNGSLEKRLYSHNYFLDILER--------LNIMIDVGSTLEYLHHGHS 446
C S D + E +LD + ++M + L++LH
Sbjct: 82 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---- 137
Query: 447 SAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
S ++H DLKP +IL+ + ++DFG++++
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
TPD M G L L H F + R ++ LE++H+ +++ D
Sbjct: 262 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRD 316
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
LKP +ILLDE+ +SD G++
Sbjct: 317 LKPANILLDEHGHVRISDLGLA 338
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 55 SMIGHSLP-NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLS 113
+ + LP NI L L N L + T ++L LD+GFNT S P L L
Sbjct: 17 TQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 76
Query: 114 VLSLLMNNLTTESSSAYQWSFLSSLT 139
VL+L N L+ S + +F ++LT
Sbjct: 77 VLNLQHNELSQLSDKTF--AFCTNLT 100
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLS-----GHLPSMIGHSLPNIKY 66
L L+ FL NN+ L + + +R LNL + LP + S +K
Sbjct: 271 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 330
Query: 67 LE---LGDNNLIGTIPNSITNATKLIILDL--GFNTFSGHIPNTFGNLRH--LSVLSLLM 119
LE + DN++ G N T L L L F + TF +L H L +L+L
Sbjct: 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 390
Query: 120 NNLTTESSSAYQW 132
N ++ S A+ W
Sbjct: 391 NKISKIESDAFSW 403
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 48/213 (22%)
Query: 166 STSLQRFSASECKLKGTIPKEIGHLR--GLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLP 223
+TS++ S S +L T L+ L L L +N+LN S L QL+ FFL
Sbjct: 221 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 280
Query: 224 ETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSL 283
N+Q L H L L ++R L+L + SI SL
Sbjct: 281 YNNIQ---------------------HLFSH---SLHGLFNVRYLNLKRSFTKQSI--SL 314
Query: 284 WSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343
SL I + Q LK L L++ N + G + L++L+ +SL+
Sbjct: 315 ASLPKIDDF-------------SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS 361
Query: 344 GSFGSVYKGTISDGTDVAIK-----IFNLQRER 371
SF S+ T+++ T V++ I NL + +
Sbjct: 362 NSFTSL--RTLTNETFVSLAHSPLHILNLTKNK 392
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 4 QIPTEI-GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLP 62
+IP E+ +L LK + LG NNL+ L + N ++++LNL N ++ + G +
Sbjct: 550 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609
Query: 63 NIKYLELGDN 72
N+ L++ N
Sbjct: 610 NLTELDMRFN 619
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
TPD M G L L H F + R ++ LE++H+ +++ D
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRD 317
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
LKP +ILLDE+ +SD G++
Sbjct: 318 LKPANILLDEHGHVRISDLGLA 339
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 53 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 113 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 168
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 169 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 202
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 13/147 (8%)
Query: 344 GSFGSVYKGTI----SDGTDVAIKIF-NLQRERAFRSFNSECEVLRNVRHQNLIKILSSC 398
G FG V++G + VAIK N + F E +R H +++K++
Sbjct: 21 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 80
Query: 399 ST-PDFKFMPN---GSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
+ P + M G L L + LD+ + + + L YL S +H D
Sbjct: 81 TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE----SKRFVHRD 136
Query: 455 LKPTSILLDENMVAHVSDFGISKLLGE 481
+ ++L+ + DFG+S+ + +
Sbjct: 137 IAARNVLVSATDCVKLGDFGLSRYMED 163
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 66 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 125
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 126 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 181
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 182 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 215
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 344 GSFGSVYKGTISD-GTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQ------NLIKILS 396
G FG V K VA+K+ ++ R R E +L ++R Q N+I +L
Sbjct: 108 GXFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166
Query: 397 S-------CSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAP 449
+ C T + M L K+ + L ++ + S L+ L H +
Sbjct: 167 NFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKF-----AHSILQCLDALHKNR- 220
Query: 450 IIHCDLKPTSILLDENMVA--HVSDFGIS 476
IIHCDLKP +ILL + + V DFG S
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS 249
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
TPD M G L L H F + R ++ LE++H+ +++ D
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRD 317
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
LKP +ILLDE+ +SD G++
Sbjct: 318 LKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 400 TPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCD 454
TPD M G L L H F + R ++ LE++H+ +++ D
Sbjct: 263 TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRD 317
Query: 455 LKPTSILLDENMVAHVSDFGIS 476
LKP +ILLDE+ +SD G++
Sbjct: 318 LKPANILLDEHGHVRISDLGLA 339
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 47 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 107 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 163 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 55 SMIGHSLP-NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLS 113
+ + LP NI L L N L + T ++L LD+GFNT S P L L
Sbjct: 27 TQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 86
Query: 114 VLSLLMNNLTTESSSAYQWSFLSSLT 139
VL+L N L+ S + +F ++LT
Sbjct: 87 VLNLQHNELSQLSDKTF--AFCTNLT 110
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLS-----GHLPSMIGHSLPNIKY 66
L L+ FL NN+ L + + +R LNL + LP + S +K
Sbjct: 281 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 340
Query: 67 LE---LGDNNLIGTIPNSITNATKLIILDL--GFNTFSGHIPNTFGNLRH--LSVLSLLM 119
LE + DN++ G N T L L L F + TF +L H L +L+L
Sbjct: 341 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 400
Query: 120 NNLTTESSSAYQW 132
N ++ S A+ W
Sbjct: 401 NKISKIESDAFSW 413
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 48/213 (22%)
Query: 166 STSLQRFSASECKLKGTIPKEIGHLR--GLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLP 223
+TS++ S S +L T L+ L L L +N+LN S L QL+ FFL
Sbjct: 231 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 290
Query: 224 ETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSL 283
N+Q L H L L ++R L+L + SI SL
Sbjct: 291 YNNIQ---------------------HLFSH---SLHGLFNVRYLNLKRSFTKQSI--SL 324
Query: 284 WSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343
SL I + Q LK L L++ N + G + L++L+ +SL+
Sbjct: 325 ASLPKIDDF-------------SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS 371
Query: 344 GSFGSVYKGTISDGTDVAIK-----IFNLQRER 371
SF S+ T+++ T V++ I NL + +
Sbjct: 372 NSFTSL--RTLTNETFVSLAHSPLHILNLTKNK 402
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 4 QIPTEI-GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLP 62
+IP E+ +L LK + LG NNL+ L + N ++++LNL N ++ + G +
Sbjct: 560 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR 619
Query: 63 NIKYLELGDN 72
N+ L++ N
Sbjct: 620 NLTELDMRFN 629
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 46 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 106 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 162 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 47 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 107 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 163 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 46 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 106 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 162 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 55 SMIGHSLP-NIKYLELGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLS 113
+ + LP NI L L N L + T ++L LD+GFNT S P L L
Sbjct: 22 TQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 81
Query: 114 VLSLLMNNLTTESSSAYQWSFLSSLT 139
VL+L N L+ S + +F ++LT
Sbjct: 82 VLNLQHNELSQLSDKTF--AFCTNLT 105
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLS-----GHLPSMIGHSLPNIKY 66
L L+ FL NN+ L + + +R LNL + LP + S +K
Sbjct: 276 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 335
Query: 67 LE---LGDNNLIGTIPNSITNATKLIILDL--GFNTFSGHIPNTFGNLRH--LSVLSLLM 119
LE + DN++ G N T L L L F + TF +L H L +L+L
Sbjct: 336 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 395
Query: 120 NNLTTESSSAYQW 132
N ++ S A+ W
Sbjct: 396 NKISKIESDAFSW 408
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 48/213 (22%)
Query: 166 STSLQRFSASECKLKGTIPKEIGHLR--GLIYLSLGFNDLNGTIPTSIGTLKQLQGFFLP 223
+TS++ S S +L T L+ L L L +N+LN S L QL+ FFL
Sbjct: 226 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 285
Query: 224 ETNLQGYVPXXXXXXXXXXXXXXXXXKLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSL 283
N+Q L H L L ++R L+L + SI SL
Sbjct: 286 YNNIQ---------------------HLFSH---SLHGLFNVRYLNLKRSFTKQSI--SL 319
Query: 284 WSLGYILEIXXXXXXXXXXXXXXVQKLKVLRVLDLSRNQLSGDIPSTIGALVDLETISLA 343
SL I + Q LK L L++ N + G + L++L+ +SL+
Sbjct: 320 ASLPKIDDF-------------SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS 366
Query: 344 GSFGSVYKGTISDGTDVAIK-----IFNLQRER 371
SF S+ T+++ T V++ I NL + +
Sbjct: 367 NSFTSL--RTLTNETFVSLAHSPLHILNLTKNK 397
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 3 GQIPTEI-GNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSL 61
+IP E+ +L LK + LG NNL+ L + N ++++LNL N ++ + G +
Sbjct: 554 DEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAF 613
Query: 62 PNIKYLELGDN 72
N+ L++ N
Sbjct: 614 RNLTELDMRFN 624
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 47 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 107 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 163 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 450 IIHCDLKPTSILL--DENMVAHVSDFGISKLLGE 481
IIHCDLKP +ILL + + DFG S LG+
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ 213
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 61 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 120
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 121 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 177 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 210
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 46 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 106 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 162 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 61 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 120
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 121 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 177 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 210
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 47 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 106
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 107 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 163 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 196
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 343 AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIK-- 393
+G F V K S G + A K ++ RA R E +LR V H N+I
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 394 -----------ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
IL S + F F+ + ++ IL+ +N YL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----------YL 131
Query: 442 HHGHSSAPIIHCDLKPTSI-LLDENM-VAHVS--DFGIS 476
H + I H DLKP +I LLD+N+ + H+ DFG++
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 445 HSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
H S IIH DLKP + LL+++ V DFG+++ +
Sbjct: 146 HESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 343 AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIK-- 393
+G F V K S G + A K ++ RA R E +LR V H N+I
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 394 -----------ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
IL S + F F+ + ++ IL+ +N YL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----------YL 131
Query: 442 HHGHSSAPIIHCDLKPTSI-LLDENM-VAHVS--DFGIS 476
H + I H DLKP +I LLD+N+ + H+ DFG++
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 343 AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
+GSFG +Y GT I+ G +VAIK+ ++ + + E ++ + ++ I + C
Sbjct: 19 SGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCGAE 76
Query: 402 -DFKFMP----NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
D+ M SLE + + L + + S +EY+H S IH D+K
Sbjct: 77 GDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVK 132
Query: 457 PTSILL---DENMVAHVSDFGISK 477
P + L+ + + ++ DFG++K
Sbjct: 133 PDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 19 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 79 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 135 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 168
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 34 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 94 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 150 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 183
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 34 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 94 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 150 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 183
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 343 AGSFGSVYKGTI-----SDGT-DVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIKI 394
AG+FG V + T D VA+K+ + + SE +++ ++ +H+N++ +
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH---- 445
L +C+ ++ G L L + L+ I ST + LH
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ 175
Query: 446 -----SSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+S IH D+ ++LL VA + DFG+++
Sbjct: 176 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 343 AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIK-- 393
+G F V K S G + A K ++ RA R E +LR V H N+I
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 394 -----------ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
IL S + F F+ + ++ IL+ +N YL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----------YL 131
Query: 442 HHGHSSAPIIHCDLKPTSI-LLDENM-VAHVS--DFGIS 476
H + I H DLKP +I LLD+N+ + H+ DFG++
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 343 AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIK-- 393
+G F V K S G + A K ++ RA R E +LR V H N+I
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLH 81
Query: 394 -----------ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
IL S + F F+ + ++ IL+ +N YL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----------YL 131
Query: 442 HHGHSSAPIIHCDLKPTSI-LLDENM-VAHVS--DFGIS 476
H + I H DLKP +I LLD+N+ + H+ DFG++
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 343 AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTP 401
+GSFG +Y GT I+ G +VAIK+ ++ + + E ++ + ++ I + C
Sbjct: 17 SGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCGAE 74
Query: 402 -DFKFMP----NGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLK 456
D+ M SLE + + L + + S +EY+H S IH D+K
Sbjct: 75 GDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVK 130
Query: 457 PTSILL---DENMVAHVSDFGISK 477
P + L+ + + ++ DFG++K
Sbjct: 131 PDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 34 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 93
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 94 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 150 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 183
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 46 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 105
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 106 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 162 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 195
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 41 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 100
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 101 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 156
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 157 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 190
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 33 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 92
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 93 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 149 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 182
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 33 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 92
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 93 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 149 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 182
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 346 FGSVYKGTI------SDGTDVAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILSSC 398
FG VYKG + VAIK + E R F E + ++H N++ +L
Sbjct: 39 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 98
Query: 399 STPD-----FKFMPNGSLEKRLYSHNYFLDI------------LER---LNIMIDVGSTL 438
+ F + +G L + L + D+ LE ++++ + + +
Sbjct: 99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM 158
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
EYL SS ++H DL ++L+ + + +SD G+ +
Sbjct: 159 EYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 19 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 79 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 135 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 168
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 18 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 77
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 78 LLDWFERPDSFVLI----LERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 134 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 167
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 450 IIHCDLKPTSILL--DENMVAHVSDFGISKLLGE 481
IIHCDLKP +ILL + + DFG S LG+
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 346 FGSVYKGTI------SDGTDVAIKIFNLQRERAFRS-FNSECEVLRNVRHQNLIKILSSC 398
FG VYKG + VAIK + E R F E + ++H N++ +L
Sbjct: 22 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 81
Query: 399 STPD-----FKFMPNGSLEKRLYSHNYFLDI---------------LERLNIMIDVGSTL 438
+ F + +G L + L + D+ + ++++ + + +
Sbjct: 82 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM 141
Query: 439 EYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
EYL SS ++H DL ++L+ + + +SD G+ +
Sbjct: 142 EYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 476
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 477 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 450 IIHCDLKPTSILL--DENMVAHVSDFGISKLLGE 481
IIHCDLKP +ILL + + DFG S LG+
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 194
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 475
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 476 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 18 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 77
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 78 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 134 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 167
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 19 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 78
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 79 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 135 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 168
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 50 SGHLPSMIGHSLPNIKYLELGDNNLIGTIPNS----ITNATKLIILDLGFNTFSGHIPNT 105
SG L S+ +K L+L NN I I NS N L++ G NT ++
Sbjct: 14 SGSLNSIPSGLTEAVKSLDLS-NNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS 72
Query: 106 FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNF 165
G+L H L L N L+ SSS ++ LSSLT +L L GNP + S+ +
Sbjct: 73 LGSLEH---LDLSYNYLSNLSSSWFK--PLSSLT------FLNLLGNPYKTLGETSLFSH 121
Query: 166 STSLQRFSASECKLKGTIP-KEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFL 222
T LQ I K+ L L L + +DL P S+ +++ + L
Sbjct: 122 LTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 179
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%)
Query: 344 GSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD 402
G++G VYKG + G AIK+ ++ + E +L+ H I
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKK 93
Query: 403 ------------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPI 450
+F GS+ + N + L+ I L L H H +
Sbjct: 94 NPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQHK-V 150
Query: 451 IHCDLKPTSILLDENMVAHVSDFGISKLL 479
IH D+K ++LL EN + DFG+S L
Sbjct: 151 IHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 14 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 74 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 130 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 16/133 (12%)
Query: 354 ISDGTDVAIKIFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPD---------FK 404
+ DG A+K ++ E ++ R H N++++++ C
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 405 FMPNGSLE---KRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSIL 461
F G+L +RL FL + L +++ + LE +H + H DLKPT+IL
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNIL 166
Query: 462 LDENMVAHVSDFG 474
L + + D G
Sbjct: 167 LGDEGQPVLMDLG 179
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 14 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 74 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 130 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 50 SGHLPSMIGHSLPNIKYLELGDNNLIGTIPNS----ITNATKLIILDLGFNTFSGHIPNT 105
SG L S+ +K L+L NN I I NS N L++ G NT ++
Sbjct: 40 SGSLNSIPSGLTEAVKSLDLS-NNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS 98
Query: 106 FGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLTNCRYLVYLILSGNPLGGILPPSIGNF 165
G+L H L L N L+ SSS ++ LSSLT +L L GNP + S+ +
Sbjct: 99 LGSLEH---LDLSYNYLSNLSSSWFK--PLSSLT------FLNLLGNPYKTLGETSLFSH 147
Query: 166 STSLQRFSASECKLKGTIP-KEIGHLRGLIYLSLGFNDLNGTIPTSIGTLKQLQGFFL 222
T LQ I K+ L L L + +DL P S+ +++ + L
Sbjct: 148 LTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 14 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 73
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 74 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNX 129
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 130 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 163
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
IIH DLKP + LL+++ + DFG+++ +
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 343 AGSFGSVYKG-TISDGTDVAIKIFNLQRERAFRSFNS------ECEVLRNVR--HQNLIK 393
+G FGSVY G +SD VAIK R + + E +L+ V +I+
Sbjct: 17 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 76
Query: 394 ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST-----LEYLHHGHSS 447
+L PD F + LE+ + F I ER + ++ + LE + H H+
Sbjct: 77 LLDWFERPDSFVLI----LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 132
Query: 448 APIIHCDLKPTSILLDENMVA-HVSDFGISKLLGE 481
++H D+K +IL+D N + DFG LL +
Sbjct: 133 G-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 166
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 117
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 118 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 36/159 (22%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR---HQNLIKILSS 397
G++G+VYK G VA+K + E S E +LR + H N+++++
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDV 74
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST------------------LE 439
C+T ++ + F + + L +D L+
Sbjct: 75 CAT--------SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 440 YLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+LH + I+H DLKP +IL+ ++DFG++++
Sbjct: 127 FLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 117
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 118 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 111
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 112 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 123
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 124 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 36/159 (22%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR---HQNLIKILSS 397
G++G+VYK G VA+K + E S E +LR + H N+++++
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDV 74
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST------------------LE 439
C+T ++ + F + + L +D L+
Sbjct: 75 CAT--------SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 440 YLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+LH + I+H DLKP +IL+ ++DFG++++
Sbjct: 127 FLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 36/159 (22%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQ--RERAFRSFNSECEVLRNVR---HQNLIKILSS 397
G++G+VYK G VA+K + E S E +LR + H N+++++
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDV 74
Query: 398 CSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST------------------LE 439
C+T ++ + F + + L +D L+
Sbjct: 75 CAT--------SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 440 YLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
+LH + I+H DLKP +IL+ ++DFG++++
Sbjct: 127 FLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 343 AGSFGSVYK-GTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIK-- 393
+G F V K S G + A K ++ RA R E +LR V H N+I
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH 81
Query: 394 -----------ILSSCSTPD-FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYL 441
IL S + F F+ + ++ IL+ +N YL
Sbjct: 82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----------YL 131
Query: 442 HHGHSSAPIIHCDLKPTSI-LLDENM-VAHVS--DFGIS 476
H + I H DLKP +I LLD+N+ + H+ DFG++
Sbjct: 132 H----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVF 153
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 33 IFN-ISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGDNNLIGTIPNSITNATKLIIL 91
IFN +S++ L + GN + I L N+ +L+L L P + + + L +L
Sbjct: 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204
Query: 92 DLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQ 131
++ N F + L L VL +N++ T Q
Sbjct: 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
+E +L V+H ++ ++ + T +++ G L +L F++ +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YL 127
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ L +LH II+ DLKP +I+L+ ++DFG+ K
Sbjct: 128 AEISMALGHLHQ----KGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 377 NSECEVLRNVRHQNLIKILSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIM 431
+E +L V+H ++ ++ + T +++ G L +L F++ +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YL 127
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
++ L +LH II+ DLKP +I+L+ ++DFG+ K
Sbjct: 128 AEISMALGHLHQ----KGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 113
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 114 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 131
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 132 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF 154
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 450 IIHCDLKPTSILLDENMVAHVSDFGISKLL 479
I H D+KP ++LLDE +SDFG++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF 155
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 133
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 134 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPN----GSLEKRLYSHNYFLD--ILERLNIM 431
+E V++ + + +++++ C + + G L K L + + D I+E ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE---LV 133
Query: 432 IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
V ++YL + +H DL ++LL A +SDFG+SK L
Sbjct: 134 HQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 343 AGSFGSVY--KGTISDGTDVAIKIFNLQRERAFRSFNS-----ECEVLRNVRHQNLIKIL 395
+G++G V K ++ G + AIKI +++ + NS E VL+ + H N++K+
Sbjct: 31 SGAYGEVLLCKDKLT-GAERAIKI--IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 396 SSCSTPDFKFMPNGSLEKRLYSHNYFLD-ILERLN--------IMIDVGSTLEYLHHGHS 446
F+ N L +Y D I+ R IM V S YLH +
Sbjct: 88 EF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN- 141
Query: 447 SAPIIHCDLKPTSILLD---ENMVAHVSDFGIS 476
I+H DLKP ++LL+ + + + DFG+S
Sbjct: 142 ---IVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 368 QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKR----LYSHNYFLD 423
QRE+ + E + R++ HQ+++ DF F+ +R L+ L
Sbjct: 64 QREK----MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 119
Query: 424 ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
E + + +YLH +IH DLK ++ L+E++ + DFG++
Sbjct: 120 EPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 351 KGTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLIKILSSCSTPDFK 404
KGT G + A K +R + R E +LR +RH N+I + F+
Sbjct: 48 KGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDI-----FE 99
Query: 405 FMPNGSLEKRLYSHNYFLDILERLNIMIDVGST------LEYLHHGHSSAPIIHCDLKPT 458
+ L L S D L + + +T L+ +H+ HS I H DLKP
Sbjct: 100 NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPE 158
Query: 459 SI-LLDENM---VAHVSDFGIS 476
+I LLD+N+ + DFGI+
Sbjct: 159 NIMLLDKNVPNPRIKLIDFGIA 180
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 9 IGNLQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLE 68
+ NL NL+ L+L +N+S + P + N++ +LNLG N L + + + YL
Sbjct: 106 LQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSPL--SNXTGLNYLT 161
Query: 69 LGDNNLIGTIPNSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLT 123
+ ++ + P I N T L L L +N P +L L + +N +T
Sbjct: 162 VTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQIT 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 368 QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKR----LYSHNYFLD 423
QRE+ + E + R++ HQ+++ DF F+ +R L+ L
Sbjct: 84 QREK----MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 139
Query: 424 ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
E + + +YLH +IH DLK ++ L+E++ + DFG++
Sbjct: 140 EPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 368 QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKR----LYSHNYFLD 423
QRE+ + E + R++ HQ+++ DF F+ +R L+ L
Sbjct: 60 QREK----MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 424 ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
E + + +YLH +IH DLK ++ L+E++ + DFG++
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 368 QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKR----LYSHNYFLD 423
QRE+ + E + R++ HQ+++ DF F+ +R L+ L
Sbjct: 60 QREK----MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 424 ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
E + + +YLH +IH DLK ++ L+E++ + DFG++
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 343 AGSFGSVYKGTI-----SDGT-DVAIKIF-NLQRERAFRSFNSECEVLRNV-RHQNLIKI 394
AG+FG V + T D VA+K+ + + SE +++ ++ +H+N++ +
Sbjct: 56 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 395 LSSCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGH---- 445
L +C+ ++ G L L + L+ I ST + LH
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQ 175
Query: 446 -----SSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
+S IH D+ ++LL VA + DFG+++
Sbjct: 176 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 421 FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
FL + + V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 189 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 421 FLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
FL + + V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 187 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
++ LE LH I++ DLKP +ILLD++ +SD G++
Sbjct: 294 EICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 368 QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKR----LYSHNYFLD 423
QRE+ + E + R++ HQ+++ DF F+ +R L+ L
Sbjct: 82 QREK----MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 137
Query: 424 ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
E + + +YLH +IH DLK ++ L+E++ + DFG++
Sbjct: 138 EPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 29/154 (18%)
Query: 343 AGSFGSV----YKGTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLI 392
+G F V KGT G + A K +R + R E +LR +RH N+I
Sbjct: 22 SGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 393 KILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST------LEYLHHGHS 446
+ F+ + L L S D L + + +T L+ +H+ HS
Sbjct: 79 TLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 447 SAPIIHCDLKPTSI-LLDENM---VAHVSDFGIS 476
I H DLKP +I LLD+N+ + DFGI+
Sbjct: 134 KR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 39/162 (24%)
Query: 344 GSFGSVYKGTIS-DGTDVAIKIFNLQRERAFR-----SFNSECEVLRNVR---HQNLIKI 394
G++G+VYK G VA+K + S E +LR + H N++++
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL 79
Query: 395 LSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST----------------- 437
+ C+T ++ + F + + L +D
Sbjct: 80 MDVCAT--------SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 438 -LEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKL 478
L++LH + I+H DLKP +IL+ ++DFG++++
Sbjct: 132 GLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 368 QRERAFRSFNSECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKR----LYSHNYFLD 423
QRE+ + E + R++ HQ+++ DF F+ +R L+ L
Sbjct: 58 QREK----MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 113
Query: 424 ILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
E + + +YLH +IH DLK ++ L+E++ + DFG++
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 433 DVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
++ LE LH I++ DLKP +ILLD++ +SD G++
Sbjct: 294 EICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 209 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 29/154 (18%)
Query: 343 AGSFGSV----YKGTISDGTDVAIKIFNLQRERAFR------SFNSECEVLRNVRHQNLI 392
+G F V KGT G + A K +R + R E +LR +RH N+I
Sbjct: 15 SGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 393 KILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGST------LEYLHHGHS 446
+ F+ + L L S D L + + +T L+ +H+ HS
Sbjct: 72 TLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 447 SAPIIHCDLKPTSI-LLDENM---VAHVSDFGIS 476
I H DLKP +I LLD+N+ + DFGI+
Sbjct: 127 KR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +S IH DL +ILL E V + DFG+++
Sbjct: 207 VAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 326 DIPSTIGALVDLETISL-------AGSFGSVYKGT-ISDGTDVAIKIFNLQRERAFRSFN 377
D +G V+L + L G F VY+ + G + A+K E R+
Sbjct: 14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII 73
Query: 378 SECEVLRNVR-HQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVG- 435
E ++ + H N+++ S+ S + G E L + ++E L M G
Sbjct: 74 QEVCFMKKLSGHPNIVQFCSAASIGKEE-SDTGQAEFLLLTELCKGQLVEFLKKMESRGP 132
Query: 436 -----------STLEYLHHGHSSAP-IIHCDLKPTSILLDENMVAHVSDFG 474
T + H H P IIH DLK ++LL + DFG
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 343 AGSFGSVY--KGTISDGTDVAIKIFNLQRERAFRSFNS-----ECEVLRNVRHQNLIKIL 395
+G++G V K ++ G + AIKI +++ + NS E VL+ + H N++K+
Sbjct: 14 SGAYGEVLLCKDKLT-GAERAIKI--IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 396 SSCSTPDFKFMPNGSLEKRLYSHNYFLD-ILERLN--------IMIDVGSTLEYLHHGHS 446
F+ N L +Y D I+ R IM V S YLH +
Sbjct: 71 EF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN- 124
Query: 447 SAPIIHCDLKPTSILLD---ENMVAHVSDFGIS 476
I+H DLKP ++LL+ + + + DFG+S
Sbjct: 125 ---IVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 34/163 (20%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------------RAFRSFNSECEVL 383
E IS+ G S+ K S G+ ++ N +++ + S+ +E L
Sbjct: 1 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 60
Query: 384 RNVRHQ--NLIKILSSCSTPDFKFMP--------NGSLEKRLYSHNYFLDILERLNIMID 433
++ +I++ T + +M N L+K+ +D ER +
Sbjct: 61 NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-----SIDPWERKSYW-- 113
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ LE +H H I+H DLKP + L+ + M+ + DFGI+
Sbjct: 114 -KNMLEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIA 153
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L+ L+L N L L P ++ + L+L N+L+ LP+ + + L N+ L L +
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQE 181
Query: 72 NNLIGTIPN 80
N+L TIP
Sbjct: 182 NSLY-TIPK 189
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 34/163 (20%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------------RAFRSFNSECEVL 383
E IS+ G S+ K S G+ ++ N +++ + S+ +E L
Sbjct: 5 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 64
Query: 384 RNVRHQ--NLIKILSSCSTPDFKFMP--------NGSLEKRLYSHNYFLDILERLNIMID 433
++ +I++ T + +M N L+K+ +D ER +
Sbjct: 65 NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-----SIDPWERKSYW-- 117
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ LE +H H I+H DLKP + L+ + M+ + DFGI+
Sbjct: 118 -KNMLEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIA 157
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L+ L+L N L L P ++ + L+L N+L+ LP+ + + L N+ L L +
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQE 181
Query: 72 NNLIGTIPN 80
N+L TIP
Sbjct: 182 NSLY-TIPK 189
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 357 GTDVAIKIFNLQRERA-----FRSFNSECEVLRNVRHQNLIKILSSCSTPD-----FKFM 406
G A+KI ++ + + E + ++H +++++L + S+ F+FM
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 407 PNGSL----EKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL 462
L KR + + + + + M + L Y H + IIH D+KP ++LL
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVAS-HYMRQILEALRYCHDNN----IIHRDVKPENVLL 163
Query: 463 ---DENMVAHVSDFGISKLLGE 481
+ + + DFG++ LGE
Sbjct: 164 ASKENSAPVKLGDFGVAIQLGE 185
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 17/65 (26%)
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-------------ENMVAHVSDFG 474
++++ + S + +LH S IIH DLKP +IL+ EN+ +SDFG
Sbjct: 136 ISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 475 ISKLL 479
+ K L
Sbjct: 192 LCKKL 196
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 17/65 (26%)
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-------------ENMVAHVSDFG 474
++++ + S + +LH S IIH DLKP +IL+ EN+ +SDFG
Sbjct: 136 ISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 475 ISKLL 479
+ K L
Sbjct: 192 LCKKL 196
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRN------VRHQNLIKILS 396
GSFG V+ T+ I L+++ + EC ++ H L +
Sbjct: 27 KGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFC 85
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
+ T + +++ G L + S + F D+ ++ L++LH S I+
Sbjct: 86 TFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEIILGLQFLH----SKGIV 140
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK--LLGE 481
+ DLK +ILLD++ ++DFG+ K +LG+
Sbjct: 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 34/163 (20%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------------RAFRSFNSECEVL 383
E IS+ G S+ K S G+ ++ N +++ + S+ +E L
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61
Query: 384 RNVRHQ--NLIKILSSCSTPDFKFMP--------NGSLEKRLYSHNYFLDILERLNIMID 433
++ +I++ T + +M N L+K+ +D ER + +
Sbjct: 62 NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-----SIDPWERKSYWKN 116
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ LE +H H I+H DLKP + L+ + M+ + DFGI+
Sbjct: 117 M---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIA 154
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L+ L+L N L L P ++ + L+L N+L+ LP+ + + L N+ L L +
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQE 181
Query: 72 NNLIGTIPN 80
N+L TIP
Sbjct: 182 NSLY-TIPK 189
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 17/65 (26%)
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-------------ENMVAHVSDFG 474
++++ + S + +LH S IIH DLKP +IL+ EN+ +SDFG
Sbjct: 118 ISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 475 ISKLL 479
+ K L
Sbjct: 174 LCKKL 178
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 12 LQNLKSLFLGANNLSGLIPPMIFNISTIRNLNLGGNRLSGHLPSMIGHSLPNIKYLELGD 71
L L+ L+L N L L P ++ + L+L N+L+ LP+ + + L N+ L L +
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQE 181
Query: 72 NNLIGTIPN 80
N+L TIP
Sbjct: 182 NSLY-TIPK 189
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 17/65 (26%)
Query: 428 LNIMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILLD-------------ENMVAHVSDFG 474
++++ + S + +LH S IIH DLKP +IL+ EN+ +SDFG
Sbjct: 118 ISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 475 ISKLL 479
+ K L
Sbjct: 174 LCKKL 178
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFRSFNSECEVLRN------VRHQNLIKILS 396
GSFG V+ T+ I L+++ + EC ++ H L +
Sbjct: 28 KGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFC 86
Query: 397 SCSTPD-----FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLHHGHSSAPII 451
+ T + +++ G L + S + F D+ ++ L++LH S I+
Sbjct: 87 TFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEIILGLQFLH----SKGIV 141
Query: 452 HCDLKPTSILLDENMVAHVSDFGISK--LLGE 481
+ DLK +ILLD++ ++DFG+ K +LG+
Sbjct: 142 YRDLKLDNILLDKDGHIKIADFGMCKENMLGD 173
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 39/93 (41%)
Query: 250 KLSGHIPPCLASLTSLRELDLGSNKLTSSIPSSLWSLGYILEIXXXXXXXXXXXXXXVQK 309
K+ + + T L +L L N++ ++ W L ++L++ +
Sbjct: 286 KIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345
Query: 310 LKVLRVLDLSRNQLSGDIPSTIGALVDLETISL 342
L L VLDLS N + + L +L+ ++L
Sbjct: 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 80 NSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLT 139
N+ + LIIL L +N F F L +L VL+L NL S +F LT
Sbjct: 73 NTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG---NFFKPLT 129
Query: 140 NCRYLVYLILSGNPLGGILPPSIGNFSTSLQRF 172
+ L L+L N + I P S F +++RF
Sbjct: 130 S---LEMLVLRDNNIKKIQPAS---FFLNMRRF 156
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 34/163 (20%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------------RAFRSFNSECEVL 383
E IS+ G S+ K S G+ ++ N +++ + S+ +E L
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 384 RNVRHQN--LIKILSSCSTPDFKFMP--------NGSLEKRLYSHNYFLDILERLNIMID 433
++ + +I++ T + +M N L+K+ +D ER + +
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-----SIDPWERKSYWKN 163
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ LE +H H I+H DLKP + L+ + M+ + DFGI+
Sbjct: 164 M---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIA 201
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 26/155 (16%)
Query: 343 AGSFGSVYKGTISDGTDVAIKIFNLQRERAFR----------SFNSECEVLRNVRHQNLI 392
+G+FG V+ + + F +++E+ E +L V H N+I
Sbjct: 34 SGAFGFVWTAVDKEKNKEVVVKF-IKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANII 92
Query: 393 KILSSCSTPDFKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLE-YLHHGHSSA--- 448
K+L F G + + H LD+ ++ + L Y+ SA
Sbjct: 93 KVLDI-------FENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 449 ----PIIHCDLKPTSILLDENMVAHVSDFGISKLL 479
IIH D+K +I++ E+ + DFG + L
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 390 NLIKILSSCSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
N+IK++ + P F+++ N K+LY IL +I + L+ L
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ------ILTDFDIRFYMYELLKALD 151
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVA-HVSDFGISKL 478
+ HS I+H D+KP ++++D + D+G+++
Sbjct: 152 YCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 378 SECEVLRNVRHQNLIKILSSCSTPDFKFMPNGSLEKRLYSHNYFLD-ILERLN------- 429
E VL+ + H N++K+ F+ N L Y D I+ R+
Sbjct: 85 EEVAVLKLLDHPNIMKLYDF-----FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA 139
Query: 430 -IMIDVGSTLEYLHHGHSSAPIIHCDLKPTSILL---DENMVAHVSDFGISKLL 479
I+ V S + YLH + I+H DLKP ++LL +++ + + DFG+S +
Sbjct: 140 VIIKQVLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 34/163 (20%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------------RAFRSFNSECEVL 383
E IS+ G S+ K S G+ ++ N +++ + S+ +E L
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 384 RNVRHQN--LIKILSSCSTPDFKFMP--------NGSLEKRLYSHNYFLDILERLNIMID 433
++ + +I++ T + +M N L+K+ +D ER + +
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-----SIDPWERKSYWKN 163
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ LE +H H I+H DLKP + L+ + M+ + DFGI+
Sbjct: 164 M---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIA 201
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 390 NLIKILSSCSTPD-------FKFMPNGSLEKRLYSHNYFLDILERLNIMIDVGSTLEYLH 442
N+IK++ + P F+++ N K+LY IL +I + L+ L
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ------ILTDFDIRFYMYELLKALD 146
Query: 443 HGHSSAPIIHCDLKPTSILLDENMVA-HVSDFGISKL 478
+ HS I+H D+KP ++++D + D+G+++
Sbjct: 147 YCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 80 NSITNATKLIILDLGFNTFSGHIPNTFGNLRHLSVLSLLMNNLTTESSSAYQWSFLSSLT 139
N+ + LIIL L +N F F L +L VL+L NL S +F LT
Sbjct: 73 NTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG---NFFKPLT 129
Query: 140 NCRYLVYLILSGNPLGGILPPSIGNFSTSLQRF 172
+ L L+L N + I P S F +++RF
Sbjct: 130 S---LEMLVLRDNNIKKIQPAS---FFLNMRRF 156
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 39/170 (22%)
Query: 343 AGSFGSVYKGT---ISD---GTDVAIKIFNLQRERAFR-SFNSECEVLRNV-RHQNLIKI 394
+G+FG V T IS VA+K+ + + + R + SE +++ + H+N++ +
Sbjct: 55 SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL 114
Query: 395 LSSCSTPD-----FKFMPNGSLEKRL-------------YSHNYFLDILERLNIM----- 431
L +C+ F++ G L L Y + L+ E LN++
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL 174
Query: 432 ----IDVGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISK 477
V +E+L +H DL ++L+ V + DFG+++
Sbjct: 175 LCFAYQVAKGMEFLEF----KSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 437 TLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGISKLLG 480
TL L H HS ++H D+KP +I L + DFG+ LG
Sbjct: 166 TLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 34/163 (20%)
Query: 338 ETISLAGSFGSVYKGTISDGTDVAIKIFNLQRE--------------RAFRSFNSECEVL 383
E IS+ G S+ K S G+ ++ N +++ + S+ +E L
Sbjct: 49 ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 108
Query: 384 RNVRHQN--LIKILSSCSTPDFKFMP--------NGSLEKRLYSHNYFLDILERLNIMID 433
++ + +I++ T + +M N L+K+ +D ER + +
Sbjct: 109 NKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-----SIDPWERKSYWKN 163
Query: 434 VGSTLEYLHHGHSSAPIIHCDLKPTSILLDENMVAHVSDFGIS 476
+ LE +H H I+H DLKP + L+ + M+ + DFGI+
Sbjct: 164 M---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIA 201
>pdb|1VT4|I Chain I, Structure Of The Drosophila Apoptosome
pdb|1VT4|J Chain J, Structure Of The Drosophila Apoptosome
pdb|1VT4|K Chain K, Structure Of The Drosophila Apoptosome
pdb|1VT4|L Chain L, Structure Of The Drosophila Apoptosome
pdb|1VT4|M Chain M, Structure Of The Drosophila Apoptosome
pdb|1VT4|N Chain N, Structure Of The Drosophila Apoptosome
pdb|1VT4|O Chain O, Structure Of The Drosophila Apoptosome
pdb|1VT4|P Chain P, Structure Of The Drosophila Apoptosome
pdb|3IZ8|A Chain A, Structure Of The Drosophila Apoptosome
pdb|3IZ8|B Chain B, Structure Of The Drosophila Apoptosome
pdb|3IZ8|C Chain C, Structure Of The Drosophila Apoptosome
pdb|3IZ8|D Chain D, Structure Of The Drosophila Apoptosome
pdb|3IZ8|E Chain E, Structure Of The Drosophila Apoptosome
pdb|3IZ8|F Chain F, Structure Of The Drosophila Apoptosome
pdb|3IZ8|G Chain G, Structure Of The Drosophila Apoptosome
pdb|3IZ8|H Chain H, Structure Of The Drosophila Apoptosome
Length = 1221
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 364 IFNLQRERAFRSFNSECEVLRNVRHQNLIKILSSCST 400
+ N+Q +A+ +FN C++L R + + LS+ +T
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,054,763
Number of Sequences: 62578
Number of extensions: 511348
Number of successful extensions: 3055
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 442
Number of HSP's that attempted gapping in prelim test: 1619
Number of HSP's gapped (non-prelim): 1297
length of query: 481
length of database: 14,973,337
effective HSP length: 103
effective length of query: 378
effective length of database: 8,527,803
effective search space: 3223509534
effective search space used: 3223509534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)